BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045739
(189 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 489
Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/189 (84%), Positives = 173/189 (91%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGRD+G+GRLGLGP GPNE GGLSIPSKVKALPVPVAAVSCGGFFTMVLT+EGQL
Sbjct: 212 ELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQL 271
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WNWGANSNYELGRGD+VGGWKP+ +P+L DVRIIQIA+GGYHSLALTDDGKV SWGYG H
Sbjct: 272 WNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQH 331
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGHS +NQK+P VIEALADE V +IACGGS+SAA+T+ GKLYMWGNAKDSQLGVPGL
Sbjct: 332 GQLGHSSIENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGL 391
Query: 181 PVVQPCPVE 189
P QP PVE
Sbjct: 392 PETQPLPVE 400
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 86/153 (56%), Gaps = 4/153 (2%)
Query: 26 GGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
G L +PS A + +SCG F L +G+LW WG LG G + P L
Sbjct: 78 GRLCLPSVENASGLTEVGISCG-LFHSSLVVDGKLWIWGKGDGGRLGFGQEYPAFLPTLN 136
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFV 145
PNL +R A GG HS+AL+ G+VF+WGYGG G LGHS + +P ++E + +
Sbjct: 137 PNLDSIR--STALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKI 194
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAK-DSQLGV 177
HIA G+ +AA+TE G+LY WG + D +LG+
Sbjct: 195 RHIATAGTHTAAITESGELYTWGRDQGDGRLGL 227
>gi|296087557|emb|CBI34146.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/189 (84%), Positives = 173/189 (91%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGRD+G+GRLGLGP GPNE GGLSIPSKVKALPVPVAAVSCGGFFTMVLT+EGQL
Sbjct: 107 ELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQL 166
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WNWGANSNYELGRGD+VGGWKP+ +P+L DVRIIQIA+GGYHSLALTDDGKV SWGYG H
Sbjct: 167 WNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQH 226
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGHS +NQK+P VIEALADE V +IACGGS+SAA+T+ GKLYMWGNAKDSQLGVPGL
Sbjct: 227 GQLGHSSIENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGL 286
Query: 181 PVVQPCPVE 189
P QP PVE
Sbjct: 287 PETQPLPVE 295
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK-DSQ 174
GYGG G LGHS + +P ++E + + HIA G+ +AA+TE G+LY WG + D +
Sbjct: 60 GYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTWGRDQGDGR 119
Query: 175 LGV 177
LG+
Sbjct: 120 LGL 122
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 61/108 (56%), Gaps = 12/108 (11%)
Query: 80 WKPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVFSWGYG-GHGQLGH--SFTQNQ- 131
+ +LLP +V+ +I IA G H+ A+T+ G++++WG G G+LG + N+
Sbjct: 72 YHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEG 131
Query: 132 ---KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+P ++AL V ++CGG + +T++G+L+ WG + +LG
Sbjct: 132 GGLSIPSKVKALPVP-VAAVSCGGFFTMVLTQEGQLWNWGANSNYELG 178
>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
Length = 450
Score = 301 bits (772), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 156/189 (82%), Positives = 174/189 (92%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+YTWGRDEG+GRLGLGPGRGPNE GGLSIPSKVKAL VPVAAV CGGFFT VLTEEGQ+
Sbjct: 228 EVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALTVPVAAVFCGGFFTAVLTEEGQI 287
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WNWGANSNYELGRG++ GGW+PK +PNL VR+IQIA+GGYHSLALTD+GKV SWG+GGH
Sbjct: 288 WNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLALTDEGKVLSWGFGGH 347
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGH QNQK+PMVI+ALAD+ V +IACGGSTSAA+T++GKLYMWGNAKDSQLGVPGL
Sbjct: 348 GQLGHPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYMWGNAKDSQLGVPGL 407
Query: 181 PVVQPCPVE 189
P VQPCPVE
Sbjct: 408 PEVQPCPVE 416
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 6/140 (4%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S +K +A+ V +SCG F + +L + G +W WG LG G + P L PNL
Sbjct: 100 STITKQEAIEV---GISCGLFHSALLVD-GNIWIWGKGDGGRLGFGHENPVFVPTLNPNL 155
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ + + GG HS+ALT G+VF+WGYGG G LGH + +P +++ +++E + HI
Sbjct: 156 DPAKCVAL--GGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHI 213
Query: 149 ACGGSTSAAVTEKGKLYMWG 168
A G+ +AA+TE G++Y WG
Sbjct: 214 ATSGTHTAAITETGEVYTWG 233
>gi|224118018|ref|XP_002331537.1| predicted protein [Populus trichocarpa]
gi|222873761|gb|EEF10892.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/189 (80%), Positives = 171/189 (90%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+YTWGR+EG+GRLGLGPGRGPNE GGLSIP KVK LPVPVA V CGGFFTMVLTEEGQ+
Sbjct: 100 EVYTWGREEGDGRLGLGPGRGPNEGGGLSIPCKVKTLPVPVATVYCGGFFTMVLTEEGQI 159
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WNWGANSNYELGRGD+VGGW+PK +P+L D RIIQIA GGYH LALTD+GKV SWG+GGH
Sbjct: 160 WNWGANSNYELGRGDKVGGWRPKPIPSLEDARIIQIAGGGYHCLALTDEGKVLSWGFGGH 219
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGHS Q+QK+P VI+ALAD+ V +IACGGS+SAA+T+KGKLYMWGNAKDSQLG+PGL
Sbjct: 220 GQLGHSSIQSQKIPAVIDALADQHVIYIACGGSSSAAITDKGKLYMWGNAKDSQLGIPGL 279
Query: 181 PVVQPCPVE 189
P VQ CPVE
Sbjct: 280 PEVQSCPVE 288
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG LG G + P L P L VR IA GG HS A+T G +F+WGYGG G
Sbjct: 2 WGKGDGGRLGFGHENPAFLPTLNPFLDSVR--SIALGGVHSAAITSLGHIFTWGYGGFGA 59
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
LGHS + P ++E D + I+ G+ +AAVTE G++Y WG +
Sbjct: 60 LGHSVYHRELFPRLVEGSWDGKIRCISTSGTHTAAVTESGEVYTWGREE 108
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 5 WGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWG 64
WG+ +G GRLG G N A +P+ + V +++ GG + +T G ++ WG
Sbjct: 2 WGKGDG-GRLGFGH---ENPA---FLPT-LNPFLDSVRSIALGGVHSAAITSLGHIFTWG 53
Query: 65 ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY---GGHG 121
LG P+L+ D +I I+ G H+ A+T+ G+V++WG G
Sbjct: 54 YGGFGALGHSVYHRELFPRLVEGSWDGKIRCISTSGTHTAAVTESGEVYTWGREEGDGRL 113
Query: 122 QLGHSFTQNQ----KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LG N+ +P ++ L T + CGG + +TE+G+++ WG + +LG
Sbjct: 114 GLGPGRGPNEGGGLSIPCKVKTLPVPVAT-VYCGGFFTMVLTEEGQIWNWGANSNYELG 171
>gi|449518441|ref|XP_004166250.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 463
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/189 (76%), Positives = 165/189 (87%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+YTWGRDEG+GRLGLGPGRGPNE GGLSIP +V+ALP PVAAVSCGGFFTM L +G+L
Sbjct: 240 EVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAPVAAVSCGGFFTMALGVDGKL 299
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WNWGAN+N+ELGRG+ +GGW+PK +P+L D IIQI GGYHSLALT DGKV SWGYGGH
Sbjct: 300 WNWGANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVCGGYHSLALTGDGKVLSWGYGGH 359
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGHS QN+KVP VI+ALAD+ V++IAC GS+SAAVT +GKLYMWGNAKDSQLGVPGL
Sbjct: 360 GQLGHSSIQNEKVPRVIDALADKRVSYIACCGSSSAAVTAEGKLYMWGNAKDSQLGVPGL 419
Query: 181 PVVQPCPVE 189
P VQ PVE
Sbjct: 420 PEVQTSPVE 428
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
Query: 14 LGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR 73
L L PG+ P+ +G + + +SCG F + +L G++W WG LG
Sbjct: 97 LALAPGQLPSFSGDNQDSGDDGSFEL---GISCGLFHSSLLVN-GKVWIWGKGDGGRLGF 152
Query: 74 GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV 133
G + P L L VR I + GG HS+AL G+VF+WGYGG G LGHS + V
Sbjct: 153 GHENPVFVPTLNSRLESVRCIAL--GGLHSVALNALGQVFTWGYGGFGALGHSVYHRELV 210
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
P ++E + HIA G+ +AA+TE G++Y WG
Sbjct: 211 PRLVEGSWRGRIKHIATSGAHTAAITESGEVYTWG 245
>gi|449456530|ref|XP_004146002.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 463
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/189 (76%), Positives = 163/189 (86%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+YTWGRDEG+GRLGLGPGRGPNE GGLSIP +V+ALP PVAAVSCGGFFTM L +G+L
Sbjct: 240 EVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAPVAAVSCGGFFTMALGVDGKL 299
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WNWGAN+N+ELGRG+ +GGW+PK +P+L D IIQI GGYHSL LT DGKV SWGYGGH
Sbjct: 300 WNWGANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVCGGYHSLVLTGDGKVLSWGYGGH 359
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGHS QN+KVP VI+ALAD+ V +IAC GS+SAAVT +GKLYMWGNAKDSQLGVPGL
Sbjct: 360 GQLGHSSIQNEKVPRVIDALADKRVIYIACCGSSSAAVTAEGKLYMWGNAKDSQLGVPGL 419
Query: 181 PVVQPCPVE 189
P VQ PVE
Sbjct: 420 PEVQTSPVE 428
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
Query: 14 LGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR 73
L L PG+ P+ +G + + +SCG F + +L G++W WG LG
Sbjct: 97 LALAPGQLPSFSGDNQDSGDDGSFEL---GISCGLFHSSLLVN-GKVWIWGKGDGGRLGF 152
Query: 74 GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV 133
G + P L L VR I + GG HS+AL G+VF+WGYGG G LGHS + V
Sbjct: 153 GHENPVFVPTLNSRLESVRCIAL--GGLHSVALNALGQVFTWGYGGFGALGHSVYHRELV 210
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
P ++E + HIA G+ +AA+TE G++Y WG
Sbjct: 211 PRLVEGSWRGRIKHIATSGAHTAAITESGEVYTWG 245
Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 56/137 (40%), Gaps = 30/137 (21%)
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI------------------------- 93
QL +WG S+ +LG G P + NL I
Sbjct: 60 QLLSWGRGSSGQLGGGIEEIRLYPSPVANLSVPNIHNLALAPGQLPSFSGDNQDSGDDGS 119
Query: 94 --IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
+ I+ G +HS +L +GKV+ WG G G+LG VP + L E V IA G
Sbjct: 120 FELGISCGLFHS-SLLVNGKVWIWGKGDGGRLGFGHENPVFVPTLNSRL--ESVRCIALG 176
Query: 152 GSTSAAVTEKGKLYMWG 168
G S A+ G+++ WG
Sbjct: 177 GLHSVALNALGQVFTWG 193
>gi|297797029|ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 445
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/189 (75%), Positives = 164/189 (86%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELY WGR+EG+GRLGLGPGRGPNE GGLS+PSKVKAL VPVA+VSCGGFFTM LT+EGQL
Sbjct: 224 ELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQL 283
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WNWGANSNYELGRGD +GGW+P +P+L VRI QIA GGYHSLALT +GKV SWG+GGH
Sbjct: 284 WNWGANSNYELGRGDNLGGWEPLPVPSLDSVRITQIACGGYHSLALTKEGKVLSWGHGGH 343
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLG+S +NQK+P IEALAD+ + IACGGS+SAA+T+ G+L+MWGNAKD QLGVPGL
Sbjct: 344 GQLGNSSLRNQKIPTEIEALADKKIVFIACGGSSSAAITDGGELWMWGNAKDFQLGVPGL 403
Query: 181 PVVQPCPVE 189
P +Q PVE
Sbjct: 404 PEIQTTPVE 412
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 83/165 (50%), Gaps = 13/165 (7%)
Query: 7 RDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGAN 66
R + L PGR I ++ + P+ +SCG F LT +G LW WG
Sbjct: 81 RSDQSFSLAQTPGR---------IDAESSSFPI---GISCG-LFHSGLTIDGDLWIWGKG 127
Query: 67 SNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS 126
LG G + P L P + I IA GG HS+ALT G VF+WGYGG G LGH
Sbjct: 128 DGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHK 187
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
+ VP ++ D ++ IA G+ +AA+TE G+LYMWG +
Sbjct: 188 VYTRELVPRCVDGSWDCKISAIATSGTHTAAITESGELYMWGREE 232
>gi|145334859|ref|NP_001078775.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|62320260|dbj|BAD94537.1| UVB-resistance protein UVR8 - like [Arabidopsis thaliana]
gi|332010007|gb|AED97390.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 276
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/189 (75%), Positives = 163/189 (86%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELY WGR+EG+GRLGLGPGRGPNE GGLS+PSKVKAL VPVA+VSCGGFFTM LT+EGQL
Sbjct: 55 ELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQL 114
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WNWGANSNYELGRGD +GGW+P +P+L VRI QIA GGYHSLALT++GKV SWG+GGH
Sbjct: 115 WNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGH 174
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLG S +NQKVP IEALAD+ + IA GGS+SAA+T+ G+L+MWGNAKD QLGVPGL
Sbjct: 175 GQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGL 234
Query: 181 PVVQPCPVE 189
P +Q PVE
Sbjct: 235 PEIQTTPVE 243
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
GYGG G LGH + VP ++ D ++ IA G+ +AA+TE G+LYMWG +
Sbjct: 8 GYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREE 63
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY---GGHGQLGHSFTQNQ----KVP 134
P+ + + D +I IA G H+ A+T+ G+++ WG G LG N+ VP
Sbjct: 26 PRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVP 85
Query: 135 MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
++AL V ++CGG + A+T++G+L+ WG + +LG
Sbjct: 86 SKVKALTVP-VASVSCGGFFTMALTKEGQLWNWGANSNYELG 126
>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 445
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/189 (75%), Positives = 163/189 (86%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELY WGR+EG+GRLGLGPGRGPNE GGLS+PSKVKAL VPVA+VSCGGFFTM LT+EGQL
Sbjct: 224 ELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQL 283
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WNWGANSNYELGRGD +GGW+P +P+L VRI QIA GGYHSLALT++GKV SWG+GGH
Sbjct: 284 WNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGH 343
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLG S +NQKVP IEALAD+ + IA GGS+SAA+T+ G+L+MWGNAKD QLGVPGL
Sbjct: 344 GQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGL 403
Query: 181 PVVQPCPVE 189
P +Q PVE
Sbjct: 404 PEIQTTPVE 412
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
+SCG F LT +G LW WG LG G + P L P + I IA GG HS
Sbjct: 106 ISCG-LFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 164
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
+ALT G VF+WGYGG G LGH + VP ++ D ++ IA G+ +AA+TE G+
Sbjct: 165 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGE 224
Query: 164 LYMWGNAK 171
LYMWG +
Sbjct: 225 LYMWGREE 232
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 16/184 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
+L+ WG+ +G GRLG G + + +P+ + ++ GG ++ LT +G
Sbjct: 120 DLWIWGKGDG-GRLGFG------QENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGD 172
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY-- 117
++ WG LG P+ + + D +I IA G H+ A+T+ G+++ WG
Sbjct: 173 VFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREE 232
Query: 118 -GGHGQLGHSFTQNQ----KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
G LG N+ VP ++AL V ++CGG + A+T++G+L+ WG +
Sbjct: 233 GDGRLGLGPGRGPNEGGGLSVPSKVKALTVP-VASVSCGGFFTMALTKEGQLWNWGANSN 291
Query: 173 SQLG 176
+LG
Sbjct: 292 YELG 295
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 21/130 (16%)
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV------------RI--------IQIAN 98
QL++WG ++ +LG G P + NL+ RI I I+
Sbjct: 49 QLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISC 108
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G +HS LT DG ++ WG G G+LG + VP + + + IA GG S A+
Sbjct: 109 GLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVAL 167
Query: 159 TEKGKLYMWG 168
T +G ++ WG
Sbjct: 168 THQGDVFTWG 177
>gi|356524449|ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 444
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/189 (77%), Positives = 168/189 (88%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELY WGRDEG+GRLGLGPGRGP+ AGGLSIPSKVK LP P+AAVSCGGFFTM LT +GQL
Sbjct: 222 ELYIWGRDEGDGRLGLGPGRGPDHAGGLSIPSKVKELPYPIAAVSCGGFFTMALTVDGQL 281
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WNWGANSNYELGRGD++GGWKP+ +P+L +V+IIQ+A+GGYHSLALTDDGKV SWG+GG
Sbjct: 282 WNWGANSNYELGRGDKIGGWKPRPVPSLENVKIIQLASGGYHSLALTDDGKVLSWGHGGQ 341
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGH QNQK+P V+EALA E + +I+CGGS+SAAVT+ GKLYMWGNA DSQLG+PGL
Sbjct: 342 GQLGHGSIQNQKIPAVVEALAHENIIYISCGGSSSAAVTDNGKLYMWGNANDSQLGIPGL 401
Query: 181 PVVQPCPVE 189
P VQ CPVE
Sbjct: 402 PPVQSCPVE 410
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 87/154 (56%), Gaps = 9/154 (5%)
Query: 22 PNEAGGLS-IPSKVKALPVP-----VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD 75
P + LS P + + LP P +SCG F + ++ + G LW WG LG G
Sbjct: 78 PKSSFALSQTPGRRRLLPSPPKRALEVGLSCGLFHSSLIVD-GALWIWGKGDGGRLGFGH 136
Query: 76 RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
+ P L P+L + ++ +A GG HS+ALT DG+VF+WGYGG G LGHS + P
Sbjct: 137 ENPLFVPTLNPHLDN--LLSVALGGLHSVALTSDGEVFTWGYGGFGALGHSVYHRELFPR 194
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+++ + + HIA G+ +AA+TE G+LY+WG
Sbjct: 195 LVKGSWEGTIKHIATSGTHTAAITESGELYIWGR 228
>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
Length = 376
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/189 (75%), Positives = 163/189 (86%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELY WGR+EG+GRLGLGPGRGPNE GGLS+PSKVKAL VPVA+VSCGGFFTM LT+EGQL
Sbjct: 155 ELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQL 214
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WNWGANSNYELGRGD +GGW+P +P+L VRI QIA GGYHSLALT++GKV SWG+GGH
Sbjct: 215 WNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGH 274
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLG S +NQKVP IEALAD+ + IA GGS+SAA+T+ G+L+MWGNAKD QLGVPGL
Sbjct: 275 GQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGL 334
Query: 181 PVVQPCPVE 189
P +Q PVE
Sbjct: 335 PEIQTTPVE 343
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
+SCG F LT +G LW WG LG G + P L P + I IA GG HS
Sbjct: 37 ISCG-LFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 95
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
+ALT G VF+WGYGG G LGH + VP ++ D ++ IA G+ +AA+TE G+
Sbjct: 96 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGE 155
Query: 164 LYMWGNAK 171
LYMWG +
Sbjct: 156 LYMWGREE 163
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 16/184 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
+L+ WG+ +G GRLG G + + +P+ + ++ GG ++ LT +G
Sbjct: 51 DLWIWGKGDG-GRLGFG------QENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGD 103
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY-- 117
++ WG LG P+ + + D +I IA G H+ A+T+ G+++ WG
Sbjct: 104 VFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREE 163
Query: 118 -GGHGQLGHSFTQNQ----KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
G LG N+ VP ++AL V ++CGG + A+T++G+L+ WG +
Sbjct: 164 GDGRLGLGPGRGPNEGGGLSVPSKVKALTVP-VASVSCGGFFTMALTKEGQLWNWGANSN 222
Query: 173 SQLG 176
+LG
Sbjct: 223 YELG 226
>gi|124359876|gb|ABN06170.1| Regulator of chromosome condensation/beta-lactamase-inhibitor
protein II [Medicago truncatula]
Length = 444
Score = 262 bits (669), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/189 (75%), Positives = 168/189 (88%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+LY WGR+EGEGRLGLGPGRGP+ AGGLSIP KVK LP PVAAVSCGGFFT+ LTEEGQL
Sbjct: 222 DLYIWGREEGEGRLGLGPGRGPDHAGGLSIPCKVKELPFPVAAVSCGGFFTLALTEEGQL 281
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WNWGANSNYELGRGDR+GGW+P+ +P+L VR+IQIA+GGYHSLALTDDGKV SWG+GG
Sbjct: 282 WNWGANSNYELGRGDRIGGWRPRPVPSLEKVRVIQIASGGYHSLALTDDGKVLSWGHGGQ 341
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGH +NQK+P ++EA+A E + +I+CGG++SAAVT++GKLYMWGNA DSQLGVPGL
Sbjct: 342 GQLGHGSVENQKIPTLVEAIAHEHIIYISCGGASSAAVTDEGKLYMWGNASDSQLGVPGL 401
Query: 181 PVVQPCPVE 189
P +QP PVE
Sbjct: 402 PAIQPYPVE 410
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 74/128 (57%), Gaps = 3/128 (2%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
+SCG F L +G LW WG LG G + P L P+L +V+ +A GG HS
Sbjct: 106 ISCG-LFHSCLVVDGGLWVWGKGDGGRLGLGHESSMFVPTLNPHLENVK--SVALGGLHS 162
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
+ALT G+VF+WGYGG G LGHS + P +++ + + HIA G+ +AAVTE G
Sbjct: 163 VALTSAGEVFTWGYGGFGALGHSVYTRELFPRLVKGAWEGTIKHIATSGAHTAAVTESGD 222
Query: 164 LYMWGNAK 171
LY+WG +
Sbjct: 223 LYIWGREE 230
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG+ +G GRLGLG + +P+ L V +V+ GG ++ LT G+++
Sbjct: 121 LWVWGKGDG-GRLGLG------HESSMFVPTLNPHLE-NVKSVALGGLHSVALTSAGEVF 172
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG----- 116
WG LG P+L+ + I IA G H+ A+T+ G ++ WG
Sbjct: 173 TWGYGGFGALGHSVYTRELFPRLVKGAWEGTIKHIATSGAHTAAVTESGDLYIWGREEGE 232
Query: 117 --YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G G +P ++ L V ++CGG + A+TE+G+L+ WG + +
Sbjct: 233 GRLGLGPGRGPDHAGGLSIPCKVKELPFP-VAAVSCGGFFTLALTEEGQLWNWGANSNYE 291
Query: 175 LG 176
LG
Sbjct: 292 LG 293
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 25/140 (17%)
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN-------------------- 98
QL +WG ++ +LG G P + NL+ + N
Sbjct: 47 QLLSWGKGASGQLGGGVEETRLYPSPVTNLLLAPKFTLFNTPGLLPGPEGSNNKGVEVGI 106
Query: 99 --GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
G +HS L DG ++ WG G G+LG + VP + L E V +A GG S
Sbjct: 107 SCGLFHS-CLVVDGGLWVWGKGDGGRLGLGHESSMFVPTLNPHL--ENVKSVALGGLHSV 163
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
A+T G+++ WG LG
Sbjct: 164 ALTSAGEVFTWGYGGFGALG 183
>gi|42573750|ref|NP_974971.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332010006|gb|AED97389.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 383
Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/196 (72%), Positives = 163/196 (83%), Gaps = 7/196 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELY WGR+EG+GRLGLGPGRGPNE GGLS+PSKVKAL VPVA+VSCGGFFTM LT+EGQL
Sbjct: 155 ELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQL 214
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WNWGANSNYELGRGD +GGW+P +P+L VRI QIA GGYHSLALT++GKV SWG+GGH
Sbjct: 215 WNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGH 274
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV-------TEKGKLYMWGNAKDS 173
GQLG S +NQKVP IEALAD+ + IA GGS+SAA+ T+ G+L+MWGNAKD
Sbjct: 275 GQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFLTDGGELWMWGNAKDF 334
Query: 174 QLGVPGLPVVQPCPVE 189
QLGVPGLP +Q PVE
Sbjct: 335 QLGVPGLPEIQTTPVE 350
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
+SCG F LT +G LW WG LG G + P L P + I IA GG HS
Sbjct: 37 ISCG-LFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 95
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
+ALT G VF+WGYGG G LGH + VP ++ D ++ IA G+ +AA+TE G+
Sbjct: 96 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGE 155
Query: 164 LYMWGNAK 171
LYMWG +
Sbjct: 156 LYMWGREE 163
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 16/184 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
+L+ WG+ +G GRLG G + + +P+ + ++ GG ++ LT +G
Sbjct: 51 DLWIWGKGDG-GRLGFG------QENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGD 103
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY-- 117
++ WG LG P+ + + D +I IA G H+ A+T+ G+++ WG
Sbjct: 104 VFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREE 163
Query: 118 -GGHGQLGHSFTQNQ----KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
G LG N+ VP ++AL V ++CGG + A+T++G+L+ WG +
Sbjct: 164 GDGRLGLGPGRGPNEGGGLSVPSKVKALTVP-VASVSCGGFFTMALTKEGQLWNWGANSN 222
Query: 173 SQLG 176
+LG
Sbjct: 223 YELG 226
>gi|194701680|gb|ACF84924.1| unknown [Zea mays]
gi|414886543|tpg|DAA62557.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 432
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/189 (72%), Positives = 161/189 (85%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGRDEG+GRLGLG G GP EAG LS+PSKV ALPVPVAAV+CGGFFTM LT +GQL
Sbjct: 207 ELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNALPVPVAAVACGGFFTMALTSDGQL 266
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WGANSN+ELGRG W+P+L+P+L R+IQ+A GGYHSLALTD+GKV SWG+GGH
Sbjct: 267 WSWGANSNFELGRGSNFSDWRPQLVPSLKSTRVIQVACGGYHSLALTDEGKVLSWGHGGH 326
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGH QN +VP+ I+AL+DE + HIACGGSTSAA++EKG LYMWGNA+D QLG+PGL
Sbjct: 327 GQLGHPTLQNHRVPLAIKALSDERIVHIACGGSTSAAISEKGDLYMWGNARDCQLGIPGL 386
Query: 181 PVVQPCPVE 189
P VQP PV+
Sbjct: 387 PEVQPLPVK 395
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 85/163 (52%), Gaps = 17/163 (10%)
Query: 9 EGEGRLGLGPGRGPN--EAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGAN 66
E + RL PGR P+ + G+ + +SCG F + +L E G W WG
Sbjct: 66 ESDPRLAPTPGRLPSAEDTSGVEV------------GISCGLFHSSLLVEGGA-WVWGKG 112
Query: 67 SNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS 126
LG GD + P PNL D+R++ + GG HS ALT G VF+WGYGG G LGH
Sbjct: 113 DGGRLGLGDESSAFVPHSNPNLRDLRLLAL--GGIHSAALTTSGDVFTWGYGGFGALGHH 170
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ +P + + +THI+ G+ +AA+T+ G+LY WG
Sbjct: 171 VYHRELLPRQVNGPWEGKITHISTSGAHTAAITDSGELYTWGR 213
>gi|242045582|ref|XP_002460662.1| hypothetical protein SORBIDRAFT_02g032760 [Sorghum bicolor]
gi|241924039|gb|EER97183.1| hypothetical protein SORBIDRAFT_02g032760 [Sorghum bicolor]
Length = 432
Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 136/189 (71%), Positives = 162/189 (85%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGRDEG+GRLGLG G GP EAG LS+PSKV ALPVPVAAV+CGGFFTM LT +GQL
Sbjct: 207 ELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNALPVPVAAVACGGFFTMALTSDGQL 266
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WGANSN+ELGRG W+P+L+P+L +R+IQ+A GGYHSLALTD+G+V SWG+GGH
Sbjct: 267 WSWGANSNFELGRGSNFSDWRPQLVPSLKSIRVIQVACGGYHSLALTDEGEVLSWGHGGH 326
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGH QN ++P+ I+AL+DE + HIACGGSTSAA++EKG LYMWGNA+D QLGVPGL
Sbjct: 327 GQLGHPTLQNHRIPLAIKALSDERIVHIACGGSTSAAISEKGDLYMWGNARDCQLGVPGL 386
Query: 181 PVVQPCPVE 189
P VQP PV+
Sbjct: 387 PEVQPLPVK 395
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 87/163 (53%), Gaps = 17/163 (10%)
Query: 9 EGEGRLGLGPGRGPN--EAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGAN 66
E + RL PGR P+ E G+ + +SCG F + +L E G +W WG
Sbjct: 66 ESDPRLAPTPGRLPSAGETSGVEV------------GISCGLFHSALLVE-GSVWVWGKG 112
Query: 67 SNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS 126
LG GD + P+ PNL D+R++ + GG HS ALT G VF+WGYGG G LGH
Sbjct: 113 DGGRLGLGDESSAFVPRPNPNLRDLRLLAL--GGIHSAALTTSGDVFTWGYGGFGALGHY 170
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ +P + + +THI+ G+ +AA+T+ G+LY WG
Sbjct: 171 VYHRELLPRQVNGPWEGKITHISTSGAHTAAITDSGELYTWGR 213
>gi|226498894|ref|NP_001144762.1| uncharacterized protein LOC100277821 [Zea mays]
gi|195646694|gb|ACG42815.1| hypothetical protein [Zea mays]
Length = 432
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/189 (71%), Positives = 161/189 (85%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGRDEG+GRLGLG G GP EAG LS+PSKV ALPVPVAAV+CGGFFTM LT +GQL
Sbjct: 207 ELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNALPVPVAAVACGGFFTMALTSDGQL 266
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WGANSN+ELGRG W+P+L+P+L R+IQ+A GGYHSLALTD+G+V SWG+GGH
Sbjct: 267 WSWGANSNFELGRGSNFSDWRPQLVPSLKSTRVIQVACGGYHSLALTDEGEVLSWGHGGH 326
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGH QN +VP+ I+AL+DE + HIACGGSTSAA++EKG LYMWGNA+D QLG+PGL
Sbjct: 327 GQLGHPTLQNHRVPLAIKALSDERIVHIACGGSTSAAISEKGDLYMWGNARDCQLGIPGL 386
Query: 181 PVVQPCPVE 189
P VQP PV+
Sbjct: 387 PEVQPLPVK 395
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 86/163 (52%), Gaps = 17/163 (10%)
Query: 9 EGEGRLGLGPGRGPN--EAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGAN 66
E + RL PGR P+ E G+ + +SCG F + +L E G W WG
Sbjct: 66 ESDPRLAPTPGRLPSAEETSGVEV------------GISCGLFHSSLLVEGGA-WVWGKG 112
Query: 67 SNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS 126
LG GD + P+ PNL D+R++ + GG HS ALT G VF+WGYGG G LGH
Sbjct: 113 DGGRLGLGDESSAFVPRSNPNLRDLRLLAL--GGIHSAALTTSGDVFTWGYGGFGALGHH 170
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ +P + + +THI+ G+ +AA+T+ G+LY WG
Sbjct: 171 VYHRELLPRQVNGPWEGKITHISTSGAHTAAITDSGELYTWGR 213
>gi|357160066|ref|XP_003578646.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Brachypodium distachyon]
Length = 432
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/189 (69%), Positives = 161/189 (85%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGRDEG+GRLGLG G GP EAG LS+PSKV ALPVPVAAV+CGGFFT+ LT EGQL
Sbjct: 207 ELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNALPVPVAAVACGGFFTIALTSEGQL 266
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WGANSN+ELGRG W+P+L+P+L ++R++Q+A GGYHSLALTD+G+V SWG+GGH
Sbjct: 267 WSWGANSNFELGRGSNSSDWRPQLVPSLKNIRVVQVACGGYHSLALTDEGEVLSWGHGGH 326
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGH QN +VP+ I+AL+ E + +IACGGSTSAA+++KG LYMWGNA+D QLGVP L
Sbjct: 327 GQLGHPAIQNHRVPLAIKALSGERIVYIACGGSTSAAISDKGDLYMWGNARDCQLGVPDL 386
Query: 181 PVVQPCPVE 189
P VQP PV+
Sbjct: 387 PEVQPLPVK 395
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
+SCG F + +L + G W WG LG GD + P+ PNL D+R++ + GG HS
Sbjct: 91 ISCGLFHSALLVDGGT-WVWGKGDGGRLGLGDESSAFVPRANPNLSDLRVLAL--GGIHS 147
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
+LT G VF+WGYGG G LGH + +P + + ++HIA G+ +AA+T+ G+
Sbjct: 148 ASLTASGDVFTWGYGGFGALGHYVYHRELLPKKVNGPWEGKISHIATSGAHTAAITDSGE 207
Query: 164 LYMWGN 169
LY WG
Sbjct: 208 LYTWGR 213
>gi|326533910|dbj|BAJ93728.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 439
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 132/189 (69%), Positives = 161/189 (85%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGRDEG+GRLGLG G GP EAG LS+PSKV ALPVPVAAV+CGGFFT+ LT +GQL
Sbjct: 214 ELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVSALPVPVAAVACGGFFTLALTSDGQL 273
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WGANSN+ELGRG W+P+++P+L +V +IQ+A GGYHSLALTD+G+V SWG+GGH
Sbjct: 274 WSWGANSNFELGRGSNSSDWRPQIVPSLKNVHVIQVACGGYHSLALTDEGEVLSWGHGGH 333
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGH QN +VP+ I+AL++E + +IACGGSTSAA++EKG LYMWGNA+D QLGVP L
Sbjct: 334 GQLGHPTIQNHRVPLAIKALSEERIVYIACGGSTSAAISEKGDLYMWGNARDCQLGVPDL 393
Query: 181 PVVQPCPVE 189
P VQP PV+
Sbjct: 394 PEVQPLPVK 402
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 16 LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD 75
L P G AGG+ + +SCG F + +L + G W WG LG GD
Sbjct: 82 LPPASGTEAAGGVEV------------GISCGLFHSALLVD-GAAWVWGKGDGGRLGLGD 128
Query: 76 RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
+ P+ PNL +R++ + GG HS ALT G VF+WGYGG G LGH + +P
Sbjct: 129 EASAFVPRANPNLAGLRVLAL--GGIHSAALTASGDVFTWGYGGFGALGHYVYHRELLPR 186
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ + + HIA G+ +AA+TE G+LY WG
Sbjct: 187 KVNCPWEGKIVHIATSGAHTAAITESGELYTWGR 220
>gi|218202624|gb|EEC85051.1| hypothetical protein OsI_32385 [Oryza sativa Indica Group]
Length = 624
Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 132/189 (69%), Positives = 159/189 (84%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGRDEG+GRLGLG G GP EAG LS+PSKV LPV VAAV+CGGFFTM LT +GQL
Sbjct: 212 ELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNPLPVSVAAVACGGFFTMALTSDGQL 271
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WGANSN+ELGRG W+P+L+P+L ++ +IQ+A GGYHSLALTD+G V SWG+GGH
Sbjct: 272 WSWGANSNFELGRGSNSSDWRPQLIPSLKNLHVIQVACGGYHSLALTDEGVVLSWGHGGH 331
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGH QN +VP+ I+AL++E + +IACGGSTSAA+TEKG LYMWGNA+D QLGVPGL
Sbjct: 332 GQLGHPTLQNHRVPLAIKALSEERIVYIACGGSTSAAITEKGDLYMWGNARDCQLGVPGL 391
Query: 181 PVVQPCPVE 189
P +QP PV+
Sbjct: 392 PEIQPLPVK 400
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 9/152 (5%)
Query: 18 PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV 77
PGR P+ A + V+ +SCG F + V+ + G W WG LG GD
Sbjct: 76 PGRLPDAAAAGTAAGAVEV------GISCGLFHSAVVVDGGA-WVWGKGDGGRLGLGDES 128
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
+ P+ PNL ++R++ + GG HS ALT G+VF+WGYGG G LGH + +P +
Sbjct: 129 SAFVPRHNPNLSELRVLAL--GGIHSAALTASGEVFTWGYGGFGALGHYVYHRELLPRKV 186
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ ++HIA G+ +AA+T+ G+LY WG
Sbjct: 187 NGPWEGKISHIATSGAHTAAITDSGELYTWGR 218
>gi|222642086|gb|EEE70218.1| hypothetical protein OsJ_30332 [Oryza sativa Japonica Group]
Length = 607
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/188 (69%), Positives = 159/188 (84%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGRDEG+GRLGLG G GP EAG LS+PSKV ALPV VAAV+CGGFFTM LT +GQL
Sbjct: 212 ELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNALPVSVAAVACGGFFTMALTSDGQL 271
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WGANSN+ELGRG W+P+L+P+L ++ +IQ+A GGYHSLALTD+G V SWG+GGH
Sbjct: 272 WSWGANSNFELGRGSNSSDWRPQLIPSLKNLHVIQVACGGYHSLALTDEGVVLSWGHGGH 331
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGH QN +VP+ I+AL++E + +IACGGSTSAA++EKG LYMWGNA+D QLGVPGL
Sbjct: 332 GQLGHPTLQNHRVPLAIKALSEERIVYIACGGSTSAAISEKGDLYMWGNARDCQLGVPGL 391
Query: 181 PVVQPCPV 188
P +QP P+
Sbjct: 392 PEIQPLPL 399
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 9/152 (5%)
Query: 18 PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV 77
PGR P+ A + V+ +SCG F + V+ + G W WG LG GD
Sbjct: 76 PGRLPDAAAAGTAAGGVEV------GISCGLFHSAVVVDGGA-WVWGKGDGGRLGLGDES 128
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
+ P+ PNL ++R++ + GG HS ALT G+VF+WGYGG G LGH + +P +
Sbjct: 129 SAFVPRHNPNLSELRVLAL--GGIHSAALTASGEVFTWGYGGFGALGHYVYHRELLPRKV 186
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ ++HIA G+ +AA+T+ G+LY WG
Sbjct: 187 NGPWEGKISHIATSGAHTAAITDSGELYTWGR 218
>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
Length = 435
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 140/188 (74%), Gaps = 1/188 (0%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGRDEGEGRLG G +E G LS P+KV+AL VP+A+V CGGFFTM LT+ GQL
Sbjct: 207 ELYTWGRDEGEGRLGHGNPDIMDE-GALSRPTKVQALDVPIASVYCGGFFTMALTKSGQL 265
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG N+N+ELG G R WKPK++ L DV ++Q+A GG+H+ ALT DGKV +WGYGG+
Sbjct: 266 WSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGN 325
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGH +N K P ++EA+AD+ T+IACG + +AA+TE G LY WG +D QLG+PGL
Sbjct: 326 GQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGL 385
Query: 181 PVVQPCPV 188
Q PV
Sbjct: 386 KDEQLDPV 393
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
V+CG F +++ E+ ++ WG LG +KP + P + R+ + GG H+
Sbjct: 91 VTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIK--RVQMASAGGLHN 147
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
+ALT+ G V++WGYG G LGH + + +P ++E + + H++ GGS SAAVTE G+
Sbjct: 148 IALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTESGE 207
Query: 164 LYMWGN 169
LY WG
Sbjct: 208 LYTWGR 213
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+++ WG+ +G GRLG+ + + ++K V S GG + LTE G +
Sbjct: 105 DVFVWGKGDG-GRLGIDTEFNQYKP---YVNPRIKR----VQMASAGGLHNIALTEVGNV 156
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG-G 119
+ WG + LG G P+LL RI+ ++ GG HS A+T+ G++++WG G
Sbjct: 157 YTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTESGELYTWGRDEG 216
Query: 120 HGQLGHSFTQNQ-----KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G+LGH P ++AL D + + CGG + A+T+ G+L+ WG + +
Sbjct: 217 EGRLGHGNPDIMDEGALSRPTKVQAL-DVPIASVYCGGFFTMALTKSGQLWSWGGNANHE 275
Query: 175 LG 176
LG
Sbjct: 276 LG 277
>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
Length = 435
Score = 225 bits (573), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 139/188 (73%), Gaps = 1/188 (0%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGRDEGEGRLG G +E G LS P+KV+AL VP+A V CGGFFTM LT+ GQL
Sbjct: 207 ELYTWGRDEGEGRLGHGNPDIMDE-GALSRPTKVQALDVPIALVYCGGFFTMALTKSGQL 265
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG N+N+ELG G R WKPK++ L DV ++Q+A GG+H+ ALT DGKV +WGYGG+
Sbjct: 266 WSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGN 325
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGH +N K P ++EA+AD+ T+IACG + +AA+TE G LY WG +D QLG+PGL
Sbjct: 326 GQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGL 385
Query: 181 PVVQPCPV 188
Q PV
Sbjct: 386 KDEQLDPV 393
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
V+CG F +++ E+ ++ WG LG +KP + P + R+ + GG H+
Sbjct: 91 VTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIK--RVQMASAGGLHN 147
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
+ALT+ G V++WGYG G LGH + + +P ++E + + H++ GGS +AAVTE G+
Sbjct: 148 IALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTESGE 207
Query: 164 LYMWGN 169
LY WG
Sbjct: 208 LYTWGR 213
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+++ WG+ +G GRLG+ + + ++K V S GG + LTE G +
Sbjct: 105 DVFVWGKGDG-GRLGIDTEFNQYKP---YVNPRIKR----VQMASAGGLHNIALTEVGNV 156
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG-G 119
+ WG + LG G P+LL RI+ ++ GG H+ A+T+ G++++WG G
Sbjct: 157 YTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTESGELYTWGRDEG 216
Query: 120 HGQLGHSFTQNQ-----KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G+LGH P ++AL D + + CGG + A+T+ G+L+ WG + +
Sbjct: 217 EGRLGHGNPDIMDEGALSRPTKVQAL-DVPIALVYCGGFFTMALTKSGQLWSWGGNANHE 275
Query: 175 LG 176
LG
Sbjct: 276 LG 277
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 23/117 (19%)
Query: 83 KLLPNLVDVRIIQIANGGYHSLALTD----DGKVFSWGYGGHGQLGHSFTQNQKVPMVIE 138
+ P+ + R +Q GY + ++ + +V++WG G HGQ+GH +K+P++I
Sbjct: 4 RAAPSHLAFRSLQRRRIGYLADRVSSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLIS 63
Query: 139 ALADEFVTHIA------------------CGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L T +A CG S E+ +++WG +LG+
Sbjct: 64 TLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLFHSVLFAEQ-DVFVWGKGDGGRLGI 119
>gi|168018697|ref|XP_001761882.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686937|gb|EDQ73323.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 242
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 132/188 (70%), Gaps = 2/188 (1%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+YTWGRDEGEGRLG P GP G +P +V+ + P+AAV+CGGFFTM LT GQL
Sbjct: 22 HVYTWGRDEGEGRLGYIP--GPEYEDGTCVPLQVRGISDPIAAVACGGFFTMALTPGGQL 79
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG NSNYELG GDR W+P+++P + + R+IQ+A GGYHS A+T+DG+V +WG+GGH
Sbjct: 80 WSWGGNSNYELGIGDRRPSWRPRMVPEVENTRLIQVACGGYHSAAITEDGEVLTWGHGGH 139
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGH N K P V++ L + +ACGG+ + AVT+ GKLY WG +D QLGV GL
Sbjct: 140 GQLGHGDLANVKAPKVVKILEGQRAVSVACGGAWTTAVTDSGKLYTWGKNRDCQLGVSGL 199
Query: 181 PVVQPCPV 188
+ P+
Sbjct: 200 MDTEMLPI 207
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYG-GHGQLGH----SFTQNQKVPMVIEALADEFVTH 147
I+ IA GG H+ A++ G V++WG G G+LG+ + VP+ + ++D +
Sbjct: 4 IVHIACGGAHTAAVSASGHVYTWGRDEGEGRLGYIPGPEYEDGTCVPLQVRGISDP-IAA 62
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ACGG + A+T G+L+ WG + +LG+
Sbjct: 63 VACGGFFTMALTPGGQLWSWGGNSNYELGI 92
>gi|302754826|ref|XP_002960837.1| hypothetical protein SELMODRAFT_402231 [Selaginella moellendorffii]
gi|300171776|gb|EFJ38376.1| hypothetical protein SELMODRAFT_402231 [Selaginella moellendorffii]
Length = 389
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 111/160 (69%), Gaps = 8/160 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGRDEGEGRLG G +E G LS P+KV+A+ V +A+V CGGF TM LT+ GQL
Sbjct: 167 ELYTWGRDEGEGRLGHGNPDIMDE-GALSRPTKVQAIDVLIASVYCGGFITMALTKSGQL 225
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG N+N+ELG G R WKPK++ L DV ++Q+A GG+H+ ALT DGKV +WGYGG+
Sbjct: 226 WSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGN 285
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
GQLGH + K ++ IACG + +AA+TE
Sbjct: 286 GQLGHGTWKTGKSRLLSRPC-------IACGPAWTAAITE 318
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 42 AAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP----------NLVDV 91
AAV+ G + + +L+ WG + G G R+G P ++ +DV
Sbjct: 150 AAVTESGKQSSLFFLRNELYTWGRDE----GEG-RLGHGNPDIMDEGALSRPTKVQAIDV 204
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
I + GG+ ++ALT G+++SWG + +LGH N P V+ AL D + +ACG
Sbjct: 205 LIASVYCGGFITMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACG 264
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLG 176
G +AA+T+ GK+ WG + QLG
Sbjct: 265 GFHAAALTQDGKVITWGYGGNGQLG 289
>gi|147844431|emb|CAN82093.1| hypothetical protein VITISV_031209 [Vitis vinifera]
Length = 363
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/65 (90%), Positives = 62/65 (95%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGRD+G+GRLGLGP GPNE GGLSIPSKVKALPVPVAAVSCGGFFTMVLT+EGQL
Sbjct: 195 ELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQL 254
Query: 61 WNWGA 65
WNWGA
Sbjct: 255 WNWGA 259
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 93/185 (50%), Gaps = 18/185 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
+L +WGR G+LG G P+ L +P P+P G + E
Sbjct: 36 QLLSWGRG-ASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIP-------GRLCLPSVEN 87
Query: 58 G----QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
+LW WG LG G + P L PNL +R A GG HS+AL+ G+VF
Sbjct: 88 ASGLTELWIWGKGDGGRLGFGHEYPAFLPTLNPNLDSIR--STALGGVHSVALSSLGQVF 145
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK-D 172
+WGYGG G LGHS + +P ++E + + HIA G+ +AA+TE G+LY WG + D
Sbjct: 146 TWGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTWGRDQGD 205
Query: 173 SQLGV 177
+LG+
Sbjct: 206 GRLGL 210
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 30/182 (16%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
EL+ WG+ +G GRLG G P P L + + + GG ++ L+
Sbjct: 93 ELWIWGKGDG-GRLGFGHEYPAFLPTLNPNLD----------SIRSTALGGVHSVALSSL 141
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVF 113
GQ++ WG LG + +LLP +V+ +I IA G H+ A+T+ G+++
Sbjct: 142 GQVFTWGYGGFGALGHSV----YHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGELY 197
Query: 114 SWGYG-GHGQLGH--SFTQNQ----KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
+WG G G+LG + N+ +P ++AL V ++CGG + +T++G+L+
Sbjct: 198 TWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTQEGQLWN 256
Query: 167 WG 168
WG
Sbjct: 257 WG 258
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 18/91 (19%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN------------L 88
+ ++ G T +TE G+L+ WG + +GD G P PN
Sbjct: 177 IRHIATAGTHTAAITESGELYTWGRD------QGDGRLGLGPNCGPNEGGGLSIPSKVKA 230
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ V + ++ GG+ ++ LT +G++++WG G
Sbjct: 231 LPVPVAAVSCGGFFTMVLTQEGQLWNWGACG 261
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 102/169 (60%), Gaps = 6/169 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALPVPVAAVSCGGFFTMVLTEEGQL 60
L +WG DE G+LG G N G+ P VK + + + V+ GG+ T+ LT G +
Sbjct: 108 LASWGGDE-YGQLGFDSG---NIVDGVQ-PRIVKGSRDLHFSRVAAGGYHTLALTGSGDV 162
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+++G S+ LG G+ G P L+ +L + + QIA G HS ALT DGKVF+WG G +
Sbjct: 163 YSFGDGSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKY 222
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
GQLGH TQN K+P+ ++AL D V IACGG + A+T G+L+ WG+
Sbjct: 223 GQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGH 271
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
E+YT G ++ G+LG+ RG E +P +V AL V ++CG T+ +TE G
Sbjct: 55 EVYTTGSNDA-GQLGV---RGMEEQ---VVPIRVAALDTHMVTHIACGFKHTVAVTETGA 107
Query: 60 LWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
L +WG + +LG G+ V G +P+++ D+ ++A GGYH+LALT G V+S+G
Sbjct: 108 LASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGD 167
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G LGH P ++++L VT IACG + SAA+T GK++ WG K QLG
Sbjct: 168 GSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLG 226
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++Y++G D G LG G G S PS VK+L + V ++CG + LT +G+
Sbjct: 161 DVYSFG-DGSSGALGHG------NLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGK 213
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG +LG G P + LVD +IQIA GG H+LA+T DG++FSWG+G
Sbjct: 214 VFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGL 273
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ GH ++ P + L + ++ G + + ++G++Y WG+ + QLG
Sbjct: 274 WGQTGHGTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLGT 331
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 69 YELGRGDR----VGGWK----PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
Y LGRGD +G + P L LV I+ IA YH+ LTD+G+V++ G
Sbjct: 5 YALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDA 64
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLG + Q VP+ + AL VTHIACG + AVTE G L WG + QLG
Sbjct: 65 GQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSG 124
Query: 181 PVVQ 184
+V
Sbjct: 125 NIVD 128
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V++ G G GQLG + P + L + + HIA +A +T++G++Y G+
Sbjct: 4 VYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSND 63
Query: 172 DSQLGVPGL 180
QLGV G+
Sbjct: 64 AGQLGVRGM 72
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 104/179 (58%), Gaps = 11/179 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
ELYTWG G+LG G NE+G P VK L V ++CG T+VLT+
Sbjct: 112 ELYTWGGGM-YGKLGHG-----NESGH-PTPCMVKHLRDEGARVTQIACGSRHTVVLTDL 164
Query: 58 GQLWNWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
G+++ WG N +G + G + P++L +L + Q+A G+H+ ALT G++F+WG
Sbjct: 165 GKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWG 224
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LGH +NQ VP ++EAL + V H+ACGG SAA+ + G+LY WG + Q+
Sbjct: 225 EGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQV 283
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 103/180 (57%), Gaps = 14/180 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
+Y+WGR E +G+LGLG + P V AL V V+CG T+VL+E+G +
Sbjct: 9 VYSWGRGE-DGQLGLGDTNDQDR------PVLVDALKSKGVVQVACGSGHTVVLSEDGAV 61
Query: 61 WNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG + LG GD GWK P+++ L RI+Q G YH+ A+TD G++++WG G
Sbjct: 62 YTWGRGDDGRLGHGD--NGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGG 119
Query: 119 GHGQLGHSFTQNQKVPMVIEALADE--FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LGH P +++ L DE VT IACG + +T+ GK+Y WG+ ++ +G
Sbjct: 120 MYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVG 179
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 108/190 (56%), Gaps = 12/190 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+YTWGR + +GRLG G + G +P V+AL + +CG + T +T++G+L
Sbjct: 61 VYTWGRGD-DGRLGHG------DNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGEL 113
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG +LG G+ G P ++ +L D R+ QIA G H++ LTD GKV++WG
Sbjct: 114 YTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDK 173
Query: 119 GHGQLGHSFTQ-NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+G +GH+ +Q +P ++E+L + VT +A G +AA+T G+++ WG K +LG
Sbjct: 174 ENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLG- 232
Query: 178 PGLPVVQPCP 187
G+ Q P
Sbjct: 233 HGMERNQMVP 242
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG + +LG GD +P L+ L ++Q+A G H++ L++DG V++WG
Sbjct: 7 GLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGR 66
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG- 176
G G+LGH + VP ++EAL + + CG +AAVT+KG+LY WG +LG
Sbjct: 67 GDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGH 126
Query: 177 --VPGLPVVQPCPVE 189
G P PC V+
Sbjct: 127 GNESGHPT--PCMVK 139
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++YTWG D+ G +G N G +P +++L V V+ GF T LT G+
Sbjct: 166 KVYTWG-DKENGVVG-----HTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGE 219
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG--- 116
++ WG LG G P+++ L+ R+ +A GG+HS A+ D G++++WG
Sbjct: 220 IFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGE 279
Query: 117 --------YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G HG+LGH + VP ++ L V +A +AA+
Sbjct: 280 HGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAAL 329
>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
magnipapillata]
Length = 896
Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 66/180 (36%), Positives = 101/180 (56%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
ELYTWG++ G GR N +P +++ L + V +V+CG F T+ L EE
Sbjct: 465 ELYTWGKECG--------GRKDN-VQNTCLPMRMENLHNQGIQVVSVACGEFHTIALCEE 515
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG+N +LG GD ++P L+ ++ +I+ + G YH+LA+T D KV+SWG+
Sbjct: 516 G-VYSWGSNEYGQLGVGDTRTRYRPVLITHISSKQIVSVVCGAYHTLAITSDYKVYSWGW 574
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G HGQLG +NQ P I+ L V A G + SA +T + +Y +G QLG+
Sbjct: 575 GVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRYVYTFGADLYGQLGI 634
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/168 (28%), Positives = 87/168 (51%), Gaps = 8/168 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLS-IPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG +E G+LG+G R ++ I SK + +V CG + T+ +T + ++
Sbjct: 517 VYSWGSNE-YGQLGVGDTRTRYRPVLITHISSK------QIVSVVCGAYHTLAITSDYKV 569
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG + +LG PK + L ++IQ A G HS LT V+++G +
Sbjct: 570 YSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRYVYTFGADLY 629
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GQLG Q +P ++++L + + I+CG + A++E ++ WG
Sbjct: 630 GQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQTIFCWG 677
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 24/193 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
+YT+G D G+LG+G IP V +L + + +SCG F T+ ++E+ +
Sbjct: 621 VYTFGADL-YGQLGIGSHYKQ------VIPQLVDSLTLDSIYLISCGPFETIAISEDQTI 673
Query: 61 WNWGAN------------SNYELGRGDRVGGWKPKLLPNLVDVR----IIQIANGGYHSL 104
+ WG N S Y + P + + I QI G +H +
Sbjct: 674 FCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQIFCGNWHYI 733
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
LT +V++WGY GQLGH +Q P +++AL + +A G S A +
Sbjct: 734 ILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAFDADDNI 793
Query: 165 YMWGNAKDSQLGV 177
WG + ++G+
Sbjct: 794 MAWGRNDEGKIGI 806
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 24/193 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
++Y+WG G+LGL P ++ L V + G + VLT +
Sbjct: 568 KVYSWGWGV-HGQLGL------KSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRY 620
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ +GA+ +LG G P+L+ +L I I+ G + ++A+++D +F WG
Sbjct: 621 VYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQTIFCWGRNY 680
Query: 120 H----------GQLGHSFTQNQK------VPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
H + G N K P ++ +T I CG +T +
Sbjct: 681 HQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQIFCGNWHYIILTSVNQ 740
Query: 164 LYMWGNAKDSQLG 176
+Y WG QLG
Sbjct: 741 VYTWGYNDCGQLG 753
>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 277
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 9/178 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LYTWG G+LG G NE+G S P +V+AL + + ++CG T V+T +G
Sbjct: 53 DLYTWGGGM-YGKLGHG-----NESG-HSTPRRVEALVGLSIVDIACGSRHTAVVTSKGC 105
Query: 60 LWNWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L+ WG N G GD G + PKLL L +++Q++ G+H+ LTDD + F+WG G
Sbjct: 106 LYTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEG 165
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG+ +N P +IE+L ++ +ACGG SA +T GK+Y +G + QLG
Sbjct: 166 KFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLG 223
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
LYTWG D+ G G G G P ++ L V +S GF T LT++ +
Sbjct: 106 LYTWG-DKENGVAGHGDTEGHQYT-----PKLLERLNGKKVVQLSACGFHTACLTDDHET 159
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG LG G P+L+ +L+ Q+A GG+HS +T DGK++++G G H
Sbjct: 160 FAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEH 219
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
GQLGH+ N+ P ++EAL V I CG S S A+T +G+ ++
Sbjct: 220 GQLGHADKVNKLKPTLVEALDGVVVKQITCGWSHSVALTSEGEYHL 265
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII-QIANGGYHSLALTDDGKVFSWGYG 118
+++WG + +LG GD +P + L V II + G YH+ A+ +G +++WG G
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+G+LGH P +EAL + IACG +A VT KG LY WG D + GV
Sbjct: 61 MYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWG---DKENGVA 117
Query: 179 G 179
G
Sbjct: 118 G 118
>gi|167385636|ref|XP_001737426.1| guanine nucleotide exchange factor [Entamoeba dispar SAW760]
gi|165899774|gb|EDR26295.1| guanine nucleotide exchange factor, putative [Entamoeba dispar
SAW760]
Length = 970
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 57/141 (40%), Positives = 87/141 (61%), Gaps = 3/141 (2%)
Query: 28 LSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN 87
+ P K++ +P P+ VS G +F +VL++ G+L++WGA +LG D KP+L+P
Sbjct: 91 IKTPQKIEGVPKPIDKVSMGSYFCVVLSK-GKLYSWGAYEGGQLGIQDVFNPSKPELVPQ 149
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
+ D++ I GGYH+LAL G+VFSWG GQLG T +++P I +L + V+
Sbjct: 150 INDIK--DICCGGYHTLALNIWGEVFSWGKNEFGQLGRINTSKKEIPSQIPSLRNYVVSR 207
Query: 148 IACGGSTSAAVTEKGKLYMWG 168
I CGG SA +T++G Y+WG
Sbjct: 208 IFCGGFCSACITDQGMGYIWG 228
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
I +++ G Y + L+ GK++SWG GQLG N P ++ + D + I CGG
Sbjct: 104 IDKVSMGSYFCVVLSK-GKLYSWGAYEGGQLGIQDVFNPSKPELVPQIND--IKDICCGG 160
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ A+ G+++ WG + QLG
Sbjct: 161 YHTLALNIWGEVFSWGKNEFGQLG 184
>gi|167393607|ref|XP_001740647.1| guanine nucleotide exchange factor [Entamoeba dispar SAW760]
gi|165895160|gb|EDR22911.1| guanine nucleotide exchange factor, putative [Entamoeba dispar
SAW760]
Length = 969
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 57/141 (40%), Positives = 87/141 (61%), Gaps = 3/141 (2%)
Query: 28 LSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN 87
+ P K++ +P P+ VS G +F +VL++ G+L++WGA +LG D KP+L+P
Sbjct: 87 IKTPQKIEGVPKPIDKVSMGSYFCVVLSK-GKLYSWGAYEGGQLGIQDVFNPSKPELVPQ 145
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
+ D++ I GGYH+LAL G+VFSWG GQLG T +++P I +L + V+
Sbjct: 146 INDIK--DICCGGYHTLALNIWGEVFSWGKNEFGQLGRINTSKKEIPSQIPSLRNYVVSR 203
Query: 148 IACGGSTSAAVTEKGKLYMWG 168
I CGG SA +T++G Y+WG
Sbjct: 204 IFCGGFCSACITDQGMGYIWG 224
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
I +++ G Y + L+ GK++SWG GQLG N P ++ + D + I CGG
Sbjct: 100 IDKVSMGSYFCVVLSK-GKLYSWGAYEGGQLGIQDVFNPSKPELVPQIND--IKDICCGG 156
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ A+ G+++ WG + QLG
Sbjct: 157 YHTLALNIWGEVFSWGKNEFGQLG 180
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 101/181 (55%), Gaps = 15/181 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++TWGR E +G+LGLG +E P+ V AL V V ++CG T+VLT +G++
Sbjct: 2 VFTWGRGE-DGQLGLGDTSDQDE------PTYVDALRGVGVQQIACGSGHTVVLTTDGEV 54
Query: 61 WNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG + LG GD GWK P++ +L ++Q+ G YH+ A+T +G +++WG G
Sbjct: 55 FTWGRGDDGRLGHGDN--GWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGG 112
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+G+LGH P +EAL V IACG +A VT G LY WG D + GV
Sbjct: 113 MYGKLGHGDEAGHATPKRVEALVGATVAQIACGSRHTAIVTASGALYTWG---DKENGVA 169
Query: 179 G 179
G
Sbjct: 170 G 170
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 8/190 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
LYTWG D+ G G G G +P ++++ VA +S GF T ++T+ G+L
Sbjct: 158 LYTWG-DKENGVAGHGETEGHQ-----YLPRLLESMAAKRVAQISACGFHTAIVTDAGEL 211
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG LG P ++ +V + Q++ GG+H+ +++DG+++++G G H
Sbjct: 212 FTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEH 271
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV-PG 179
GQLGH+ N+ P +EAL FV+ I CG S S A+T KG +Y WGN +LG G
Sbjct: 272 GQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNG 331
Query: 180 LPVVQPCPVE 189
V P VE
Sbjct: 332 RKVAVPQAVE 341
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 97/178 (54%), Gaps = 9/178 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVA-AVSCGGFFTMVLTEEGQ 59
E++TWGR + +GRLG G + G +P ++L + V+CG + T +T G
Sbjct: 53 EVFTWGRGD-DGRLGHG------DNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGD 105
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG +LG GD G PK + LV + QIA G H+ +T G +++WG
Sbjct: 106 LYTWGGGMYGKLGHGDEAGHATPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKE 165
Query: 120 HGQLGHSFTQ-NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G GH T+ +Q +P ++E++A + V I+ G +A VT+ G+L+ WG K +LG
Sbjct: 166 NGVAGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLG 223
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
EL+TWG EG+ G LG N + V P VSCGGF T V++E+G+
Sbjct: 210 ELFTWG----EGKFGRLGHMSERNCHSPTIVDYMVGKKP---RQVSCGGFHTAVVSEDGR 262
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG DRV P + L + + QI G HS+ALT G V++WG G
Sbjct: 263 LYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGD 322
Query: 120 HGQLGHSFTQNQKVPMVIE 138
HG+LGH + VP +E
Sbjct: 323 HGKLGHGNGRKVAVPQAVE 341
>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
Length = 1024
Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 72/192 (37%), Positives = 107/192 (55%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + + P V+ L VP+A +S G +M L+ G
Sbjct: 158 ELFAWGQNL-HGQLGVG-----RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + + +A GG HS LT DG +F++G G
Sbjct: 212 IYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSHSALLTQDGLLFTFGAGK 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ KD QLG
Sbjct: 272 HGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
Query: 179 GL-PVVQPCPVE 189
G + P PV+
Sbjct: 332 GTRDQLIPLPVK 343
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/144 (36%), Positives = 85/144 (59%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG++E G+LGLG + PS ++AL V ++CGG + +LT++G L
Sbjct: 212 IYSWGKNEF-GQLGLGHTESKD------YPSLIEALDNQEVEFLACGGSHSALLTQDGLL 264
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA + +LG +P L+ LV R+ QIA G +H+LA D GKVFS+G G
Sbjct: 265 FTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T++Q +P+ ++ + E
Sbjct: 325 DGQLGNGGTRDQLIPLPVKVSSSE 348
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 25 AGGLSIPSKVK-ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+GG P +K + + +V G ++L+ +G+ + + NY + +
Sbjct: 82 SGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEY---DNYSMKH--------LR 130
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALA 141
L + +IIQI G YHSLAL+ G++F+WG HGQL G F + P ++E LA
Sbjct: 131 FESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFP-STTTPQIVEHLA 189
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ I+ G + S A++ G +Y WG + QLG+
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGL 225
>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
purpuratus]
Length = 1139
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 1 ELYTWGRDEGEGRLGLGP-----GRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTM 52
++YTWGR EGRLG G GR P P +V+ L + V AV+CG TM
Sbjct: 791 DVYTWGRAH-EGRLGQGDIMSLDGRAP--------PLRVETLHMHGIHVRAVACGKEHTM 841
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
+T+EG+L++WG++S +LG GDR +P + L R + +A G H+L LT D ++
Sbjct: 842 AVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVACGQLHTLVLTQDQRL 901
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+S+G+G HGQLGH ++Q +P ++ L+ + I+ G + S A+T G+++M+G++
Sbjct: 902 WSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGISAGYAHSGALTNDGQVWMFGSSSF 961
Query: 173 SQLGV 177
QLG
Sbjct: 962 GQLGT 966
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 9/172 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY+WG G+LG+G + S P V+AL +V+CG T+VLT++ +
Sbjct: 848 KLYSWG-SSSYGQLGVG------DRNVHSRPVAVEALSGQRCLSVACGQLHTLVLTQDQR 900
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
LW++G + +LG GD PKL+ L I+ I+ G HS ALT+DG+V+ +G
Sbjct: 901 LWSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGISAGYAHSGALTNDGQVWMFGSSS 960
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK-GKLYMWGNA 170
GQLG VP+ ++AL+ V+ + CG ++ A+T K+Y WG +
Sbjct: 961 FGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNIAITSNPQKVYTWGKS 1012
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 37 LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD--RVGGWKPKLLPNLVD---V 91
L +P V G + G ++ WG LG+GD + G P L + +
Sbjct: 769 LLLPTQNVLACGQDHAAIVANGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHGI 828
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
+ +A G H++A+T +GK++SWG +GQLG P+ +EAL+ + +ACG
Sbjct: 829 HVRAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVACG 888
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLG 176
+ +T+ +L+ +G QLG
Sbjct: 889 QLHTLVLTQDQRLWSFGWGVHGQLG 913
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 23/129 (17%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIP-------SKVKALPV-------------- 39
++YTWG+ E R L R +++ S P +++ +LP+
Sbjct: 1005 KVYTWGKSPLELRQALQLARKRHQSSRYSNPDPHHQTVTRLPSLPLENQHLLPSLVPTNI 1064
Query: 40 --PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P+ ++ G ++LT G L++WG+N +LG G+RV P L+ D + + +A
Sbjct: 1065 QAPIKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVPVLINRSRDDQFVAVA 1124
Query: 98 NGGYHSLAL 106
G SLA+
Sbjct: 1125 AGSRFSLAV 1133
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 33/175 (18%)
Query: 21 GPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ-LWNWGANSNYELGRGDRVG 78
G G ++P ++KAL V+ ++CG + + +T Q ++ WG S EL + ++
Sbjct: 965 GTGSIGKSTVPVRLKALSSHHVSILTCGYYSNIAITSNPQKVYTWG-KSPLELRQALQLA 1023
Query: 79 GWK------------------------------PKLLPNLVDVRIIQIANGGYHSLALTD 108
+ P L+P + I ++ G H L LT
Sbjct: 1024 RKRHQSSRYSNPDPHHQTVTRLPSLPLENQHLLPSLVPTNIQAPIKKMTMSGNHYLMLTT 1083
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
G ++SWG GQLG +Q VP++I D+ +A G S AV + +
Sbjct: 1084 VGDLYSWGSNEAGQLGMGNRVSQSVPVLINRSRDDQFVAVAAGSRFSLAVNYQNQ 1138
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN---QKVPMVIEALADE--FVTHIAC 150
+A G H+ A+ +G V++WG G+LG + + P+ +E L V +AC
Sbjct: 777 LACGQDHA-AIVANGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHGIHVRAVAC 835
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + AVT++GKLY WG++ QLGV
Sbjct: 836 GKEHTMAVTQEGKLYSWGSSSYGQLGV 862
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 98/177 (55%), Gaps = 7/177 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y WG D G G+G A +P K++AL V + ++ GF T +T++G
Sbjct: 163 EVYCWG-DRENGVCGIGEA-----AEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGA 216
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
LW+WG LG+G+ P + L VR+ Q+A GG+HS +T+DG V ++G G
Sbjct: 217 LWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGE 276
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
HGQLGH N+ VP +++AL + + CG S + ++E GK++ +GN +LG
Sbjct: 277 HGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLG 333
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
LY+WGR E +G+ G G +P V+ L + V ++CG T+VLTE+ +
Sbjct: 8 LYSWGRGE-DGQCGNGSTNDQ------EMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDV 60
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG + LG D + P L+ L I Q+ G YH+ A++D G +++WG G +
Sbjct: 61 WSWGRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMY 120
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G+LGH P +EA V IACG +AA+ G++Y WG+ ++ G+
Sbjct: 121 GKLGHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGI 177
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEEGQL 60
L+TWG G+LG G NE G + P +V+A + V ++CG T L G++
Sbjct: 112 LWTWGGGM-YGKLGHG-----NEVGHPA-PCRVEAFIGREVEQIACGSRHTAALLAGGEV 164
Query: 61 WNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N G G+ + PK L L V+I QIA G+H+ A+T DG ++SWG G
Sbjct: 165 YCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGK 224
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG +NQ P +E L V +ACGG SA VTE G + +G + QLG
Sbjct: 225 FGRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLG 281
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 10/150 (6%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
L++WG EG+ G LG G N+ P V+ L V V V+CGGF + +TE+G
Sbjct: 217 LWSWG----EGKFGRLGQGNEKNQV----TPCCVEGLQGVRVKQVACGGFHSACVTEDGD 268
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G + +LG GD+ P L+ L I+Q+ G H++ L++DGKVF++G G
Sbjct: 269 VLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGD 328
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
HG+LGH +P ++E+LA+ V +A
Sbjct: 329 HGKLGHGANAKSALPKLVESLANMKVAKVA 358
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
+ L++WG + + G G P + L + ++QIA G H++ LT+D V+SW
Sbjct: 4 HDSMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSW 63
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G G+LGH+ + VP ++ AL + + + CG +AA+++ G L+ WG +L
Sbjct: 64 GRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKL 123
Query: 176 G---VPGLPVVQPCPVE 189
G G P PC VE
Sbjct: 124 GHGNEVGHPA--PCRVE 138
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 16 LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG 74
LG G N ++P VKAL + V+CG T+ L+E+G+++ +G + +LG G
Sbjct: 280 LGHGDKTNR----TVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHG 335
Query: 75 DRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
PKL+ +L ++++ ++A+ H++AL
Sbjct: 336 ANAKSALPKLVESLANMKVAKVASYNEHTVAL 367
>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Felis catus]
Length = 1143
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 106/178 (59%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G ++ ++IP V+ L +P+ +S G +M L+ G
Sbjct: 276 ELFAWGQN-LHGQLGIG-----SQFASIAIPQIVENLSGIPLVQISAGKAHSMALSMSGN 329
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G G P L+ L + ++ +A GG H+ LT DG VF++G G
Sbjct: 330 IYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGK 389
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
HGQLGH+ TQN+ P ++ LA VT IACG T A V++ GK++ +G+ K+ QLG
Sbjct: 390 HGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSDLGKVFSFGSGKEGQLG 447
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WGR++ G+LGLG G PS ++AL V ++CGG T +LT++G +
Sbjct: 330 IYSWGRNDF-GQLGLG------HTDGKDFPSLIEALDNQKVEFLACGGSHTALLTKDGLV 382
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA + +LG +P+L+ L R+ QIA G H+LA D GKVFS+G G
Sbjct: 383 FTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSDLGKVFSFGSGK 442
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK--LYMWGNAKDSQLGV 177
GQLG+ T NQ +P+ ++ ++E +T + + G + +W K+S + +
Sbjct: 443 EGQLGNGGTHNQLIPLPMKLPSNEELTFESRASEKELIMIAGGNQSILLWMGKKNSYVNL 502
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
+ +V G + ++L+ +G+ + + N + E R + L + IIQI G
Sbjct: 218 IHSVDQGAEYMLILSSDGKPFEY--NYSIEHARFQCI----------LQEKXIIQITCGD 265
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
YHSLAL+ G++F+WG HGQLG S + +P ++E L+ + I+ G + S A++
Sbjct: 266 YHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAGKAHSMALS 325
Query: 160 EKGKLYMWGNAKDSQLGV 177
G +Y WG QLG+
Sbjct: 326 MSGNIYSWGRNDFGQLGL 343
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
G KPK + +I + G + L L+ DGK F + Y + H+ Q
Sbjct: 203 GTRKPKCIKLGKKAKIHSVDQGAEYMLILSSDGKPFEYNYS----IEHARFQC------- 251
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L ++ + I CG S A+++ G+L+ WG QLG+
Sbjct: 252 -ILQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGI 290
>gi|383861352|ref|XP_003706150.1| PREDICTED: uncharacterized protein LOC100881287 [Megachile rotundata]
Length = 1884
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 11/191 (5%)
Query: 2 LYTWGRDEGEGRLGLGPG---RGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
+YTWG +G LG GP GP +A S K + V V +VSCG T+ +T G
Sbjct: 839 VYTWGSSV-QGCLGTGPSVLRYGPPQA-----ISFFKIMEVEVLSVSCGHCHTLAVTNNG 892
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG++ +LG G + P+L+ L II G YHS+ALT DG+VF+WG+G
Sbjct: 893 -VYAWGSSRFGQLGLGKILQCSTPELITYLAQEVIIDAVAGQYHSVALTADGRVFTWGWG 951
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH T + VP +I +L + +I+ G + + A++ +G +Y +G QLGV
Sbjct: 952 VHGQLGHGNTDKKIVPTLITSLLGTVIRYISAGHAHTLALSTEGIVYAFGCNIFGQLGV- 1010
Query: 179 GLPVVQPCPVE 189
G V P++
Sbjct: 1011 GSNVKSSVPIK 1021
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEEGQ 59
+Y WG G+LGLG + S P + L V + AV+ G + ++ LT +G+
Sbjct: 893 VYAWGSSRF-GQLGLG------KILQCSTPELITYLAQEVIIDAVA-GQYHSVALTADGR 944
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG + +LG G+ P L+ +L+ I I+ G H+LAL+ +G V+++G
Sbjct: 945 VFTWGWGVHGQLGHGNTDKKIVPTLITSLLGTVIRYISAGHAHTLALSTEGIVYAFGCNI 1004
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GQLG VP I+ L E + I G + AV+ KLY+WG
Sbjct: 1005 FGQLGVGSNVKSSVP--IKVLLPEKIFLITTGYFHNLAVSYTNKLYVWG 1051
Score = 39.3 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 84 LLPNLVDVR-----IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP 134
L P +VD IIQI+ G +H+ +T DG +++WG GQ+G+ + +P
Sbjct: 1149 LKPTVVDTSLVRGDIIQISAGCHHNALVTKDGSLYTWGRNLDGQIGNGSRREVPIP 1204
>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
Length = 1229
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 62/178 (34%), Positives = 102/178 (57%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL---PVPVAAVSCGGFFTMVLTEEG 58
+YTWG+ +G LG GP + S+PS + L + V V+CG T LT G
Sbjct: 843 IYTWGQTV-KGCLGQGPTMSRH-----SLPSPISLLNCFKLEVLYVACGKNHTTALTNNG 896
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG + +LG GD P+L+ +L + +I ++ G +H+LALT+ G+VF+WG+G
Sbjct: 897 -VYAWGCSKYGQLGLGDVYESPYPRLITSLANENVITLSCGQFHTLALTEKGQVFAWGWG 955
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
HGQLG +Q++P+ + L D+ + IA G S +++KG+++ +G+ QLG
Sbjct: 956 VHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLG 1013
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 66/186 (35%), Positives = 98/186 (52%), Gaps = 15/186 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
+Y WG + G+LGLG + P + +L V +SCG F T+ LTE+GQ+
Sbjct: 897 VYAWGCSK-YGQLGLG------DVYESPYPRLITSLANENVITLSCGQFHTLALTEKGQV 949
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + +LG G+ P + +L D I IA G HSL L+D G++FS+G G
Sbjct: 950 FAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSDKGQIFSFGSGVF 1009
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVT-------HIACGGSTSAAVTEKGKLYMWGNAKDS 173
GQLG T VP++I+ ++++ + I+CG SA +T G +Y WG + D
Sbjct: 1010 GQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSALLTVSGGVYTWGRSLDG 1069
Query: 174 QLGVPG 179
QLG G
Sbjct: 1070 QLGNGG 1075
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 21/193 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAA-VSCGGFFTMVLTEEGQ 59
+++ WG G+LGLG +P V L V ++ G ++VL+++GQ
Sbjct: 948 QVFAWGWGV-HGQLGLG------NIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSDKGQ 1000
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA--------LTDDGK 111
++++G+ +LG G+ P L+ + + +II IA G +HS++ LT G
Sbjct: 1001 IFSFGSGVFGQLGTGNTTKSSVPVLIQGISE-KIILIATGYFHSISCGCHHSALLTVSGG 1059
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH-IACGGS-TSAAVTEKGKLYMWGN 169
V++WG GQLG+ + P I + F I+CG T+A + GK++ WG+
Sbjct: 1060 VYTWGRSLDGQLGNGGHKEVTAPTQIN--ENTFKADCISCGCEFTAAQEKQTGKIFCWGS 1117
Query: 170 AKDSQLGVPGLPV 182
Q+ V L +
Sbjct: 1118 NSVGQVRVTNLAI 1130
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADE 143
L L + +I + N GY AL +G +++WG G LG T ++ +P I +L +
Sbjct: 816 LVELFNKKINSVLNCGYGHTALIRNGTIYTWGQTVKGCLGQGPTMSRHSLPSPI-SLLNC 874
Query: 144 F---VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
F V ++ACG + + A+T G +Y WG +K QLG+
Sbjct: 875 FKLEVLYVACGKNHTTALTNNG-VYAWGCSKYGQLGL 910
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 102/191 (53%), Gaps = 11/191 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G +IP V L + V VSCG T+ +TE
Sbjct: 572 ELYTWGRG-NYGRLGHGSSEDQ------TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ I++++ G S+ALT DG+V+SWG
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGK 684
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH ++ + P ++E L E V + G + A+TE ++Y WG+ Q
Sbjct: 685 GDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQ-HF 743
Query: 178 PGLPVVQPCPV 188
L + +P P
Sbjct: 744 DTLRITKPDPT 754
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 94/170 (55%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG M LT +G++++WG +
Sbjct: 3026 GRLGLGLS-----SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3080
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS A+T G+++SWG G +G+LGH
Sbjct: 3081 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3140
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3190
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 19/190 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3178 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3230
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +II +A G H LA+TD G+V++WG H
Sbjct: 3231 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDH 3290
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG-------KLYMWGNAKD- 172
GQ G+ T + P +++ L + +T +ACG S S + T + ++ A+D
Sbjct: 3291 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVSWTTMDVATPSVHEPVLFQTARDP 3350
Query: 173 ---SQLGVPG 179
S LGVP
Sbjct: 3351 LGASYLGVPS 3360
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 98/181 (54%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E+++WG +G GRLG G P P LS K V ++CG ++ +T E
Sbjct: 516 EVFSWGCGDG-GRLGHGDTVPLEEPKMISALSGKQAGKH----VVHIACGSTYSAAITAE 570
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSW 115
G+L+ WG + LG G P L+ L +++I ++ +G +LA+T++G+V+SW
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSW 630
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G +G+LG + K P +IE L D + ++CG S A+T+ G++Y WG + +L
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRL 690
Query: 176 G 176
G
Sbjct: 691 G 691
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2964 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3016
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L + V+ + + +GG H++ALT DGKVFSWG
Sbjct: 3017 VYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 3076
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3077 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLG 3136
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4039 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4098
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ IA GG HS +T G +++WG G +G+LGH +++Q P ++EAL V IACG
Sbjct: 4099 VDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSG 4158
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4159 DAQTLCLTDDDTVWSWGDGDYGKLG 4183
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+LYTWG+ GR G LG G ++ P V+AL V ++CG T+ LT+
Sbjct: 4116 DLYTWGK----GRYGRLGHGDSEDQLK----PKLVEALQGYRVIDIACGSGDAQTLCLTD 4167
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L V ++++ G S+ALT G V++WG
Sbjct: 4168 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWG 4227
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4228 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4287
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELY+WG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3123 ELYSWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3235
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3236 GDYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + + VSCG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I + G H LALT+D +V+SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 739 QCQHFDTLRITKPDPTALPGLDSKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 789
Query: 180 LPVVQPCPV 188
VV CP+
Sbjct: 790 PFVVDVCPM 798
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L V V V CG F++ LT+ G +
Sbjct: 4171 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAV 4223
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4283
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + + +ACG + + A
Sbjct: 4284 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4320
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ LG P+L+ +L I++IA +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSDI-LG---------PQLVQSLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+VFSWG G G+LGH T + P +I AL A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 83/144 (57%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ L ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH +++Q +PM++ L V ++CG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4076
Query: 176 G 176
G
Sbjct: 4077 G 4077
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+++ G S+A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2947 LVRKKTSGLESVA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3005
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3006 KSLFAVTVEGKVYACGEATNGRLGL 3030
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 57/145 (39%), Positives = 86/145 (59%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V ++CG T+V+TE G+L+ +G N +LG G KP + L +I +A G
Sbjct: 37 VTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGR 96
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
+H+LA+TD K++S+G G G LGH + +P IE+L D+ V IACGG SAA+T+
Sbjct: 97 FHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAITK 156
Query: 161 KGKLYMWGNAKDSQLGVPGLPVVQP 185
G+LY+WG+ + QLG+ + P
Sbjct: 157 NGELYIWGSNSEGQLGLKNDTISYP 181
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 65/181 (35%), Positives = 111/181 (61%), Gaps = 17/181 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELY WG + EG+LGL + +S P+ + L V +V+CG + T V+T +G+L
Sbjct: 159 ELYIWGSNS-EGQLGL-------KNDTISYPTMLD-LGKSVISVACGYYHTAVVTADGKL 209
Query: 61 WNWGANSNYELGRGD----RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +G +LG GD +V KPK++ + +++++A GG H++ALT G+V+++G
Sbjct: 210 YTFGETEGGKLGLGDIEAHKVT--KPKVVKG-ISGKVVKVACGGNHTVALTASGQVYTFG 266
Query: 117 YGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G +GQLG S + +P ++EAL+ + HIACG S +A V++KG+L+ +G+ + +L
Sbjct: 267 SGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKL 326
Query: 176 G 176
G
Sbjct: 327 G 327
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 10/165 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+LYT+G EG G+LGLG EA ++ P VK + V V+CGG T+ LT GQ+
Sbjct: 208 KLYTFGETEG-GKLGLGD----IEAHKVTKPKVVKGISGKVVKVACGGNHTVALTASGQV 262
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G+ N +LG G ++ PKL+ L +I IA G H+ ++D G++F++G G
Sbjct: 263 YTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGR 322
Query: 120 HGQLGH---SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
HG+LG SF+ N P+ ++ L + V HIACGG + K
Sbjct: 323 HGKLGQGDESFS-NLFKPVKVQRLKEFIVLHIACGGCHTIVACNK 366
Score = 95.9 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
L+T+G +E G+LG+G + N+ P+ VKAL P + V+ G F T+ +T+ +L
Sbjct: 56 LFTFGNNEW-GQLGIGSNKTRNK------PTTVKALKPEKITHVAAGRFHTLAVTDSNKL 108
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+++G S LG GD P + +L D + IA GGYHS A+T +G+++ WG
Sbjct: 109 YSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSE 168
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +N + + V +ACG +A VT GKLY +G + +LG+
Sbjct: 169 GQLG---LKNDTISYPTMLDLGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGL 222
Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/183 (31%), Positives = 109/183 (59%), Gaps = 20/183 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY++G+ EG LG G + L++P+ +++L V ++CGG+ + +T+ G+
Sbjct: 107 KLYSFGQGS-EGALGHG------DETDLNMPTSIESLEDKDVNIIACGGYHSAAITKNGE 159
Query: 60 LWNWGANSNYELG-RGDRVGGWKPKLLPNLVDV--RIIQIANGGYHSLALTDDGKVFSWG 116
L+ WG+NS +LG + D + P ++D+ +I +A G YH+ +T DGK++++G
Sbjct: 160 LYIWGSNSEGQLGLKNDTIS------YPTMLDLGKSVISVACGYYHTAVVTADGKLYTFG 213
Query: 117 YGGHGQLGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G+LG + KV P V++ ++ + V +ACGG+ + A+T G++Y +G+ ++ Q
Sbjct: 214 ETEGGKLGLGDIEAHKVTKPKVVKGISGK-VVKVACGGNHTVALTASGQVYTFGSGQNGQ 272
Query: 175 LGV 177
LG+
Sbjct: 273 LGL 275
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
++ IA G H++ +T++G++F++G GQLG + + P ++AL E +TH+A G
Sbjct: 36 KVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAG 95
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLG 176
+ AVT+ KLY +G + LG
Sbjct: 96 RFHTLAVTDSNKLYSFGQGSEGALG 120
>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
boliviensis]
Length = 1024
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 8/181 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + + P V+ L +P+A +S G +M L+ G
Sbjct: 158 ELFAWGQNL-HGQLGVG-----RKFPSTTTPQIVEHLSGIPLAQISAGEAHSMALSMSGN 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG P L+ L + ++ +A GG H+ LT DG +F++G G
Sbjct: 212 IYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTFGAGK 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH+ TQN+ P ++ LA VT IACG T A V++ GK++ +G+ K+ QLG
Sbjct: 272 HGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNG 331
Query: 179 G 179
G
Sbjct: 332 G 332
Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats.
Identities = 49/137 (35%), Positives = 85/137 (62%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N + +LG G + P+++ +L + + QI+ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAG 199
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ G ++SWG GQLG T+++ P +IEAL ++ V +ACGGS +A +T
Sbjct: 200 EAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLT 259
Query: 160 EKGKLYMWGNAKDSQLG 176
+ G L+ +G K QLG
Sbjct: 260 QDGLLFTFGAGKHGQLG 276
Score = 86.3 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 54/153 (35%), Positives = 88/153 (57%), Gaps = 12/153 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG++E G+LGL + PS ++AL V ++CGG T +LT++G L
Sbjct: 212 IYSWGKNEF-GQLGLDHTESKDS------PSLIEALDNQKVEFLACGGSHTALLTQDGLL 264
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA + +LG +P L+ L R+ QIA G +H+LA D GKVFS+G G
Sbjct: 265 FTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324
Query: 120 HGQLGHSFTQNQKVPMVIEALADE---FVTHIA 149
GQLG+ T++Q +P+ ++ ++E F +H +
Sbjct: 325 EGQLGNGGTRDQLIPLPMKVSSNEDLKFESHTS 357
Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALADEFV 145
L + +IIQI G YHSLAL+ G++F+WG HGQL G F + P ++E L+ +
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFP-STTTPQIVEHLSGIPL 193
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
I+ G + S A++ G +Y WG + QLG+
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGL 225
>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 3/169 (1%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S P +V+ L V ++ G F + L E+G LW WG N +LG GD +
Sbjct: 182 PGDIKQISTPVRVQGLE-KVRLIAVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQPRSQ 240
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK-VPMVIEAL 140
P + L D+ ++ IA GG+HS ALTDDG V+ WG G HG+LG ++ K VP ++ L
Sbjct: 241 PIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLL 300
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
+E + I+CGG+ S A+T G+++ +G +LG G V P+E
Sbjct: 301 VEENIVQISCGGTHSVALTRDGRMFSFGRGDHGRLGY-GRKVTTGHPME 348
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 13/140 (9%)
Query: 2 LYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
L+ WG +E G+LG G P P GLS + + ++ GG+ + LT++G
Sbjct: 219 LWAWGNNE-YGQLGTGDTQPRSQPIAVQGLS--------DLTLVDIAAGGWHSTALTDDG 269
Query: 59 QLWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG + LG GD + P+ + LV+ I+QI+ GG HS+ALT DG++FS+G
Sbjct: 270 GVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVEENIVQISCGGTHSVALTRDGRMFSFGR 329
Query: 118 GGHGQLGHSFTQNQKVPMVI 137
G HG+LG+ PM +
Sbjct: 330 GDHGRLGYGRKVTTGHPMEV 349
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 17/178 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
+ +WG E +G+LG+G VKAL V +V G ++ + E+G+L
Sbjct: 8 IISWGSGE-DGQLGIGNNEEKEWV------CAVKALAAQNVCSVVAGSRNSLAICEDGKL 60
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N LG P + L + +I+Q A GG+H LA+ D G+ ++WG
Sbjct: 61 FTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNE 120
Query: 120 HGQLGHSFTQN--------QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+GQ G + + + + + V +A GG+ S +T +G ++ WG
Sbjct: 121 YGQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGHVWTWGQ 178
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG+ + +LG G+ + L + + G +SLA+ +DGK+F+WG+ G
Sbjct: 10 SWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQRG 69
Query: 122 QLGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LGH T+ + +P ++ALA+ + A GG AV ++G+ Y WG + Q G
Sbjct: 70 TLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 125
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
+ SWG G GQLG + ++ ++ALA + V + G S A+ E GKL+ WG +
Sbjct: 8 IISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQ 67
Query: 172 DSQLGVP 178
LG P
Sbjct: 68 RGTLGHP 74
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 96/177 (54%), Gaps = 7/177 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++YTWG D+ G G G G + P V L + + +S GF T L+E GQ
Sbjct: 158 DVYTWG-DKENGVSGHGDTSGHQYS-----PYCVSELVEINIKQISACGFHTAALSENGQ 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ +G LG K + L+ RI Q+A GG+H+ A+T+ G VF+WG G
Sbjct: 212 VFTFGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGE 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
HGQLGH NQ +P +E+L D+ + + CG S + A+T+KG+++ WGN +LG
Sbjct: 272 HGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLG 328
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 100/181 (55%), Gaps = 15/181 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+YTWGR E +G+LGLG P V+AL +SCG T+VLT++G++
Sbjct: 3 VYTWGRGE-DGQLGLGDTSDQYH------PILVEALQDRQTVQISCGSGHTVVLTDDGKV 55
Query: 61 WNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG + LG GD GWK P+L+ +L D ++ Q+ G YH+ A+T G++++WG G
Sbjct: 56 YTWGRGDDGRLGHGD--NGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGG 113
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+G+LGH P ++E++ +V +ACG + + E +Y WG D + GV
Sbjct: 114 MYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWG---DKENGVS 170
Query: 179 G 179
G
Sbjct: 171 G 171
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 111/243 (45%), Gaps = 62/243 (25%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++YTWGR + +GRLG G + G +P V+ L V V+CG + T +T G+
Sbjct: 54 KVYTWGRGD-DGRLGHG------DNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGE 106
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPN-------------------------------- 87
L+ WG +LG G+ G P L+ +
Sbjct: 107 LYTWGGGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKE 166
Query: 88 ---------------------LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS 126
LV++ I QI+ G+H+ AL+++G+VF++G G G+LGH+
Sbjct: 167 NGVSGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHN 226
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPC 186
+NQ V I+AL + + +ACGG +AAVTE G ++ WG + QLG G V Q
Sbjct: 227 SERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLG-HGDKVNQII 285
Query: 187 PVE 189
P
Sbjct: 286 PTR 288
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 4/150 (2%)
Query: 10 GEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GEG+ G LG N+ I + + + V+CGGF T +TE G ++ WG +
Sbjct: 216 GEGKFGRLGHNSERNQPVAKCIDALIGK---RIKQVACGGFHTAAVTESGHVFTWGGGEH 272
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG GD+V P + +L+D IIQ+ G H++ALTD G+VF+WG G HG+LGH+ T
Sbjct: 273 GQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDT 332
Query: 129 QNQKVPMVIEALADEFVTHIACGGSTSAAV 158
P +IE + V +A + A+
Sbjct: 333 NKVTEPKLIETFNSKRVISVASYNEHTVAL 362
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++TWG E G+LG G + IP++V++L + ++CG T+ LT++G+
Sbjct: 263 HVFTWGGGE-HGQLGHG------DKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGE 315
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
++ WG + +LG D +PKL+ R+I +A+ H++AL +
Sbjct: 316 VFTWGNGDHGKLGHNDTNKVTEPKLIETFNSKRVISVASYNEHTVALVN 364
>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
Length = 1024
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 8/181 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + + P V+ L +P+A +S G +M L+ G
Sbjct: 158 ELFAWGQNL-HGQLGVG-----RKFPSTTAPQIVEHLAGIPLAQISAGEAHSMALSMSGN 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG P L+ L + ++ +A GG H+ LT DG +F++G G
Sbjct: 212 IYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTFGAGK 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH+ TQN+ P ++ LA VT IACG T A V++ GK++ +G+ K+ QLG
Sbjct: 272 HGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNG 331
Query: 179 G 179
G
Sbjct: 332 G 332
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 49/137 (35%), Positives = 85/137 (62%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N + +LG G + P+++ +L + + QI+ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAG 199
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ G ++SWG GQLG T+++ P +IEAL ++ V +ACGGS +A +T
Sbjct: 200 EAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLT 259
Query: 160 EKGKLYMWGNAKDSQLG 176
+ G L+ +G K QLG
Sbjct: 260 QDGLLFTFGAGKHGQLG 276
Score = 86.3 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 54/153 (35%), Positives = 88/153 (57%), Gaps = 12/153 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG++E G+LGL + PS ++AL V ++CGG T +LT++G L
Sbjct: 212 IYSWGKNEF-GQLGLDHTESKDS------PSLIEALDNQKVEFLACGGSHTALLTQDGLL 264
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA + +LG +P L+ L R+ QIA G +H+LA D GKVFS+G G
Sbjct: 265 FTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324
Query: 120 HGQLGHSFTQNQKVPMVIEALADE---FVTHIA 149
GQLG+ T++Q +P+ ++ ++E F +H +
Sbjct: 325 EGQLGNGGTRDQLIPLPMKVSSNEDLKFESHTS 357
Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALADEFV 145
L + +IIQI G YHSLAL+ G++F+WG HGQL G F + P ++E LA +
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFP-STTAPQIVEHLAGIPL 193
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
I+ G + S A++ G +Y WG + QLG+
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGL 225
>gi|156396598|ref|XP_001637480.1| predicted protein [Nematostella vectensis]
gi|156224592|gb|EDO45417.1| predicted protein [Nematostella vectensis]
Length = 753
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 63/170 (37%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL---PVPVAAVSCGGFFTMVLTEE 57
++YTWG+ +GRLG G E G S+P +V+ L + V +V+CG T+ L +
Sbjct: 50 DVYTWGKSH-KGRLGHG---DLIEEEGKSMPFRVEILHMHRIKVLSVACGIEHTLALCRD 105
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG++ +LG+GD +P + L D + I + G YHSLAL+ D +V+SWG+
Sbjct: 106 G-VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCIAVVCGHYHSLALSADQQVYSWGW 164
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
G HGQLG ++ +P + +L+ FVT +A G S +A +T +GK+Y +
Sbjct: 165 GVHGQLGLDSIEDALLPSHVTSLSGAFVTQLAAGYSHTAVLTTEGKVYTF 214
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 8/140 (5%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV------RIIQIA 97
+SCG T V++ G ++ WG + LG GD + + K +P V++ +++ +A
Sbjct: 35 LSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEE-EGKSMPFRVEILHMHRIKVLSVA 93
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
G H+LAL DG V+SWG +GQLG TQ P+ + L+D+ + CG S A
Sbjct: 94 CGIEHTLALCRDG-VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCIAVVCGHYHSLA 152
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
++ ++Y WG QLG+
Sbjct: 153 LSADQQVYSWGWGVHGQLGL 172
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 23/148 (15%)
Query: 29 SIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN 87
++P V+AL + + CG F T+ ++ E +L+NWG + +Y
Sbjct: 231 TLPQLVQALEKDRIYLICCGSFETVAVSSEQKLFNWGRSPHY------------------ 272
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV-PMVIEALADEFVT 146
R I G +H LA+T+ +VF+WG+ HGQLGHS + + + P V++ L + FV
Sbjct: 273 ---FRFHMIHCGNWHYLAVTEARQVFTWGFNDHGQLGHSTSMDHLLFPTVVQKLNESFVA 329
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
+ G S A+ G++++WG + Q
Sbjct: 330 TASVGAEFSVAMDATGQVWVWGRSDSGQ 357
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 6/169 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y+WG E G+LG G + ++ S K + AV CG + ++ L+ + Q++
Sbjct: 107 VYSWGSSE-YGQLGQGDTQQHTRPVYVTELSDKKCI-----AVVCGHYHSLALSADQQVY 160
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG + +LG P + +L + Q+A G H+ LT +GKV+++G G +G
Sbjct: 161 SWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLAAGYSHTAVLTTEGKVYTFGGGLYG 220
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
QLG T Q +P +++AL + + I CG + AV+ + KL+ WG +
Sbjct: 221 QLGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAVSSEQKLFNWGRS 269
Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS---FTQNQKVPMVIEALADEF--VTHI 148
++++ G +H+ ++ G V++WG G+LGH + + +P +E L V +
Sbjct: 33 VRLSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLSV 92
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
ACG + A+ G +Y WG+++ QLG
Sbjct: 93 ACGIEHTLALCRDG-VYSWGSSEYGQLG 119
Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYH 102
+ CG + + +TE Q++ WG N + +LG + P ++ L + + + G
Sbjct: 278 IHCGNWHYLAVTEARQVFTWGFNDHGQLGHSTSMDHLLFPTVVQKLNESFVATASVGAEF 337
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQ 129
S+A+ G+V+ WG GQ HS ++
Sbjct: 338 SVAMDATGQVWVWGRSDSGQSLHSSSE 364
>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
Length = 395
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 96/169 (56%), Gaps = 3/169 (1%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S P +V+ L V ++ G F + LTE+G LW WG N +LG GD +
Sbjct: 187 PGDIKQISTPVRVQGLE-NVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQ 245
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK-VPMVIEAL 140
P + L D+ ++ IA GG+HS ALT +G+V++WG G HG+LG ++ VP +E L
Sbjct: 246 PIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELL 305
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
A E + ++CGG+ S A+T G+++ +G +LG G V P+E
Sbjct: 306 AGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGY-GRKVTTGHPME 353
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 25/173 (14%)
Query: 2 LYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
L+ WG +E G+LG G P P GLS S V ++ GG+ + LT+EG
Sbjct: 224 LWAWGNNE-YGQLGTGDTQPRSQPIRVEGLSDLSLVD--------IAAGGWHSTALTKEG 274
Query: 59 QLWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+++ WG + LG GD + P+ + L IIQ++ GG HS+ALT DG++FS+G
Sbjct: 275 EVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGR 334
Query: 118 GGHGQLGHSFTQNQKVPMVI------------EALADEFVTHIACGGSTSAAV 158
G HG+LG+ PM + ++ ++ACGG + A+
Sbjct: 335 GDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAI 387
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 21/180 (11%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG E +G+LG+G + A G++ + AL V +AV G ++ + +G+L+
Sbjct: 13 VLAWGSGE-DGQLGMGGYEEEDWARGVA---ALDALAV--SAVVAGSRNSLAICADGRLF 66
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVFSWGY 117
WG N LG K + P VD V I+Q A GG+H LA+ D G+ ++WG
Sbjct: 67 TWGWNQRGTLGHPPET---KTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGG 123
Query: 118 GGHGQLGHSFTQNQ--------KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+GQ G + + +P+ V +A GG+ S +T+ G ++ WG
Sbjct: 124 NEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQ 183
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG+ + +LG G + + L + + + G +SLA+ DG++F+WG+ G
Sbjct: 16 WGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQRGT 75
Query: 123 LGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LGH T+ + P ++ALA + A GG AV +KG+ Y WG + Q G
Sbjct: 76 LGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCG 130
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V +WG G GQLG + + + AL V+ + G S A+ G+L+ WG +
Sbjct: 13 VLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQ 72
Query: 172 DSQLGVPGLPVVQ--PCPVE 189
LG P + P PV+
Sbjct: 73 RGTLGHPPETKTESSPAPVD 92
>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 96/169 (56%), Gaps = 3/169 (1%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S P +V+ L V ++ G F + LTE+G LW WG N +LG GD +
Sbjct: 187 PGDIKQISTPVRVQGLE-NVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQ 245
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK-VPMVIEAL 140
P + L D+ ++ IA GG+HS ALT +G+V++WG G HG+LG ++ VP +E L
Sbjct: 246 PIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELL 305
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
A E + ++CGG+ S A+T G+++ +G +LG G V P+E
Sbjct: 306 AGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGY-GRKVTTGHPME 353
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 25/173 (14%)
Query: 2 LYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
L+ WG +E G+LG G P P GLS S V ++ GG+ + LT+EG
Sbjct: 224 LWAWGNNE-YGQLGTGDTQPRSQPIRVEGLSDLSLVD--------IAAGGWHSTALTKEG 274
Query: 59 QLWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+++ WG + LG GD + P+ + L IIQ++ GG HS+ALT DG++FS+G
Sbjct: 275 EVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGR 334
Query: 118 GGHGQLGHSFTQNQKVPMVI------------EALADEFVTHIACGGSTSAAV 158
G HG+LG+ PM + ++ ++ACGG + A+
Sbjct: 335 GDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAI 387
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 21/180 (11%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG E +G+LG+G + A G++ + AL V +AV G ++ + +G+L+
Sbjct: 13 VLAWGSGE-DGQLGMGGYEEEDWARGVA---ALDALAV--SAVVAGSRNSLAICADGRLF 66
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVFSWGY 117
WG N LG K + P VD V I+Q A GG+H LA+ D G+ ++WG
Sbjct: 67 TWGWNQRGTLGHPPET---KTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGG 123
Query: 118 GGHGQLGHSFTQNQ--------KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+GQ G + + +P+ V +A GG+ S +T+ G ++ WG
Sbjct: 124 NEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQ 183
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG+ + +LG G + + L + + + G +SLA+ DG++F+WG+ G
Sbjct: 16 WGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQRGT 75
Query: 123 LGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LGH T+ + P ++ALA + A GG AV +KG+ Y WG + Q G
Sbjct: 76 LGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCG 130
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V +WG G GQLG + + + AL V+ + G S A+ G+L+ WG +
Sbjct: 13 VLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQ 72
Query: 172 DSQLGVPGLPVVQ--PCPVE 189
LG P + P PV+
Sbjct: 73 RGTLGHPPETKTESSPAPVD 92
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G ++P V L + V VSCG T+ +TE
Sbjct: 571 ELYTWGRG-NYGRLGHGSSEDQ------TVPMLVTGLKGLKVVDVSCGSGDAQTLSVTEN 623
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ I+++ G S+A+T DG+V+SWG
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGK 683
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH ++ + P ++ L + V +A G + A+TE G++Y WG+ Q
Sbjct: 684 GDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQ-HF 742
Query: 178 PGLPVVQPCP 187
L + +P P
Sbjct: 743 DTLRIAKPVP 752
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3026 GRLGLGIS-----SGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3080
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS A+T G++++WG G +G+LGH
Sbjct: 3081 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3190
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 10/174 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG + +G+LG ++ P ++AL + ++CG + +T G+
Sbjct: 3071 KVFSWGEGD-DGKLGHFSRMNCDK------PRLIEALKTKRIRDIACGSSHSAAITSSGE 3123
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD KPK++ L+ R+IQ+A G +LALTD+G VFSWG
Sbjct: 3124 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3183
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
G G+LG ++ +P IE L + V I CG S A+T+ G ++ W K
Sbjct: 3184 GDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTK 3237
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2964 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGK 3016
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L + V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3017 VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWG 3076
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3077 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG 3136
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L +
Sbjct: 4047 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEV 4106
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ IA GG HS +T G++++WG G +G+LGH +++Q P ++EAL V IACG
Sbjct: 4107 VDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSG 4166
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4167 DAQTLCLTDDDTVWSWGDGDYGKLG 4191
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
ELYTWG+ GR G LG G ++ P V+AL V ++CG T+ LT+
Sbjct: 4124 ELYTWGK----GRYGRLGHGDSEDQLK----PKLVEALQGYRVIDIACGSGDAQTLCLTD 4175
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L V + ++ G S+ALT G V++WG
Sbjct: 4176 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWG 4235
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4236 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4295
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L V V V CG F++ LT+ G +
Sbjct: 4179 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAV 4231
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4232 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4291
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + + +ACG + + A
Sbjct: 4292 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4328
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 12/162 (7%)
Query: 21 GPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW 80
GP GL+ + VK P G + L+ +L++WG LG GD V
Sbjct: 483 GPQLVQGLASRNIVKIAAHP------DGQHYLALSATSELFSWGCGDGGRLGHGDTVSLE 536
Query: 81 KPKLLPNL----VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMV 136
+PKL+ L ++I IA G +S A+T DG++++WG G +G+LGH +++Q VPM+
Sbjct: 537 EPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPML 596
Query: 137 IEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+ L V ++CG + + +VTE G+++ WG+ +LG
Sbjct: 597 VTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLG 638
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + + V CG F++ +T++GQ
Sbjct: 625 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQ 677
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PK++ L +++ +A G H LALT+ G+V+SWG
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSND 737
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + VP V+ L + + I+CG + S + W + + +G+
Sbjct: 738 QCQHFDTLRIAKPVPSVLPGLDSKHIVGISCGPAQS---------FAWSSCSEWSIGLRV 788
Query: 180 LPVVQPCPV 188
VV CP+
Sbjct: 789 PFVVDVCPM 797
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3178 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQAVCQIECGAQFSLALTKSGVV 3230
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN-----GGYHSLALTD---DGKV 112
W W + + L + +L V VR + + Y L + KV
Sbjct: 3231 WTWXX-TKHCLAVXFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKV 3289
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
++WG HGQ G+ T + P ++ L + +T +ACG S S A
Sbjct: 3290 YAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3334
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4024
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4025 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4084
Query: 176 G 176
G
Sbjct: 4085 G 4085
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 79/186 (42%), Gaps = 17/186 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3123 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++W
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXX 3235
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVT----HIACGGSTSAAVTE---KGKLYMWGNA 170
H + N + + + ++ FV C + + K+Y WG+
Sbjct: 3236 TKHCLAVXFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDN 3295
Query: 171 KDSQLG 176
Q G
Sbjct: 3296 DHGQQG 3301
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
++ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2947 FVRKKTAGLESTA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3005
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3006 KSLFAVTAEGKVYACGEATNGRLGL 3030
>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 96/170 (56%), Gaps = 4/170 (2%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S+P +V+ L V ++ G F + L E+G LW WG N +LG GD +
Sbjct: 185 PGDIKQISVPVRVQGLE-NVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ 243
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEA 139
P + L D+ ++ IA GG+HS ALTD+G+V+ WG G HG+L G S ++ VP ++
Sbjct: 244 PIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQL 303
Query: 140 LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
LA E + ++CGG+ S A+T G ++ +G +LG G V P+E
Sbjct: 304 LAGEDIVQVSCGGTHSVALTRDGHMFSFGRGDHGRLGY-GRKVTTGQPME 352
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 91/175 (52%), Gaps = 23/175 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
L+ WG +E G+LG G + S P +V+ L + + ++ GG+ + LT+EG++
Sbjct: 222 LWAWGNNE-YGQLGTG------DTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEV 274
Query: 61 WNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG + LG GD K P+ + L I+Q++ GG HS+ALT DG +FS+G G
Sbjct: 275 YGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIVQVSCGGTHSVALTRDGHMFSFGRG 334
Query: 119 GHGQLGH----SFTQNQKVPMVIEALADEFVTH---------IACGGSTSAAVTE 160
HG+LG+ + Q +VP+ + D T +ACGG + A+ E
Sbjct: 335 DHGRLGYGRKVTTGQPMEVPIDLPPPQDPSGTATEGHWIAKLVACGGRHTLAIVE 389
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 21/183 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+ WG E +G+LG+G E + + VKAL P + +V G ++ + ++G+
Sbjct: 6 HIIAWGSGE-DGQLGIGSN---EEKEWVCL---VKALQPHRIRSVVAGSRNSLAIADDGK 58
Query: 60 LWNWGANSNYELG-----RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
L+ WG N LG + + P + L V+I+Q A GG+H LA+ D G+ ++
Sbjct: 59 LFTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYA 118
Query: 115 WGYGGHGQLGHSFTQ--------NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
WG +GQ G + + + + V +A GG+ S +T +G ++
Sbjct: 119 WGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWT 178
Query: 167 WGN 169
WG
Sbjct: 179 WGQ 181
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG+ + +LG G L+ L RI + G +SLA+ DDGK+F+WG+
Sbjct: 10 WGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGWNQRAT 69
Query: 123 LGH-----SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LGH S + + P ++AL+ + A GG AV ++G+ Y WG + Q G
Sbjct: 70 LGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 128
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
+ +WG G GQLG + ++ +++AL + + G S A+ + GKL+ WG +
Sbjct: 7 IIAWGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGWNQ 66
Query: 172 DSQLGVP 178
+ LG P
Sbjct: 67 RATLGHP 73
>gi|320163137|gb|EFW40036.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 2579
Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 108/198 (54%), Gaps = 14/198 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP---VAAVSCGGFFTMVLTEE 57
++YTWG G+LG G + G L P++ + L + +A++SCG T+ +T E
Sbjct: 1492 DVYTWGSSH-NGQLG--HGDMIDGVGSLP-PARCETLHMNSNRIASISCGAEHTVAITNE 1547
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV-----RIIQIANGGYHSLALTDDGKV 112
G ++ WGAN +LG GD KP +L L V RIIQ+A G +H+L LTD G+V
Sbjct: 1548 GMVYAWGANGYGQLGLGDTDKRTKPTMLSRLEPVVMHESRIIQVACGYFHTLFLTDKGEV 1607
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
++ G+G GQLG T N +P+ ++ L ++ + +A G S +TE G LY +G
Sbjct: 1608 WACGWGAQGQLGVGSTSNALLPVHVKILDNKGIVGLAAGFCHSVVLTESGTLYAFGGNSY 1667
Query: 173 SQLGVPG--LPVVQPCPV 188
QLG G L + P PV
Sbjct: 1668 GQLGAAGTVLTSLTPFPV 1685
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G G+LGLG + LS V + V+CG F T+ LT++G++W
Sbjct: 1550 VYAWGAN-GYGQLGLGDTDKRTKPTMLSRLEPVVMHESRIIQVACGYFHTLFLTDKGEVW 1608
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G + +LG G P + L + I+ +A G HS+ LT+ G ++++G +G
Sbjct: 1609 ACGWGAQGQLGVGSTSNALLPVHVKILDNKGIVGLAAGFCHSVVLTESGTLYAFGGNSYG 1668
Query: 122 QLGHSFT-QNQKVPMVIEALADEFVTHIACGGSTSAAV 158
QLG + T P + LAD VT I+CG +A V
Sbjct: 1669 QLGAAGTVLTSLTPFPVAGLADVHVTWISCGTFQTACV 1706
Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 14/161 (8%)
Query: 30 IPSKVKALPVPVAA---VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR---VGGWKPK 83
+ S+ AL P+ + ++CG + + G ++ WG++ N +LG GD VG P
Sbjct: 1461 LQSRAPALLPPITSPYVIACGSTHASFVYD-GDVYTWGSSHNGQLGHGDMIDGVGSLPPA 1519
Query: 84 LLPNL--VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
L RI I+ G H++A+T++G V++WG G+GQLG T + P ++ L
Sbjct: 1520 RCETLHMNSNRIASISCGAEHTVAITNEGMVYAWGANGYGQLGLGDTDKRTKPTMLSRLE 1579
Query: 142 -----DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ + +ACG + +T+KG+++ G QLGV
Sbjct: 1580 PVVMHESRIIQVACGYFHTLFLTDKGEVWACGWGAQGQLGV 1620
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEF--VT 146
D ++Q+ G +H L LT G V+ G HGQLG +S Q++P I A D +
Sbjct: 1842 DEHVVQVVCGDWHMLMLTSRGSVYCLGANEHGQLGINSLRPRQEIPKRIGAF-DHVPPII 1900
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLP 181
+A G SA V G+ ++WG A + QLG P
Sbjct: 1901 ALAAGEDFSACVDAAGQTWIWGRADNGQLGQESTP 1935
Score = 42.7 bits (99), Expect = 0.062, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 25 AGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKL 84
+GG IP+ + A V V CG + ++LT G ++ GAN + +LG + +P+
Sbjct: 1831 SGG--IPAALAAADEHVVQVVCGDWHMLMLTSRGSVYCLGANEHGQLG----INSLRPRQ 1884
Query: 85 -LPNLVDV-----RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
+P + II +A G S + G+ + WG +GQLG T N
Sbjct: 1885 EIPKRIGAFDHVPPIIALAAGEDFSACVDAAGQTWIWGRADNGQLGQESTPN 1936
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 102/179 (56%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG G+LGLG G + L+ PS++ P V V+CG T+ LT G+
Sbjct: 6 ELYCWG-STSHGQLGLG---GIEDEQILT-PSQIPWTPDTAVEQVACGHRHTLFLTANGK 60
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+N + +LG + +P L+P L D IIQI+ G HSLAL+D G+V SWG
Sbjct: 61 VYACGSNDHSQLGHD--LPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118
Query: 120 HGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH+ + ++P V+ L + V IACG + S A+T G+LY WG+ QLGV
Sbjct: 119 CGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 99/178 (55%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + G+LG+ P + + P ++ L +P+AA++CGG + ++++ G
Sbjct: 163 ELYSWGSN-IYGQLGVN---SPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGA 218
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + + +A G S+ LT++G VF+ G G
Sbjct: 219 VFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 278
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH F+ N+ +P ++ L +T +ACG T A V +G++Y +G QLG
Sbjct: 279 YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLG 336
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LGL N+ + P+++K L + V V+CG F++ LT EG +
Sbjct: 219 VFGWGRNNC-GQLGL------NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+++ L+ I Q+A G H+LAL G+V+++G G
Sbjct: 272 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGS 331
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG T++ +P V+
Sbjct: 332 SGQLGTRSTKSLMLPQVV 349
>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
gi|194706180|gb|ACF87174.1| unknown [Zea mays]
Length = 391
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 2/156 (1%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S P +V+ L V ++ G F + LTE+G LW WG N +LG GD
Sbjct: 184 PGDIKQISTPVRVQGLE-KVRVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSH 242
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK-VPMVIEAL 140
P + L D+ ++ IA GG+HS ALT G+V++WG G HG+LG ++ + VP+ +E L
Sbjct: 243 PIRVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGRLGFGDDKSSRMVPLKVELL 302
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A E + ++CGG+ S A+T G+++ +G +LG
Sbjct: 303 AGEDIVQVSCGGTHSVALTRDGRMFSYGRGDHGRLG 338
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 2 LYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
L+ WG +E G+LG G P P GLS S V ++ GG+ + LT +G
Sbjct: 221 LWAWGNNE-YGQLGTGDTQPRSHPIRVEGLSDLSLVD--------IAAGGWHSTALTIQG 271
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYHSLALTDDGKVFS 114
+++ WG + LG GD +++P V++ I+Q++ GG HS+ALT DG++FS
Sbjct: 272 EVYAWGRGEHGRLGFGDDK---SSRMVPLKVELLAGEDIVQVSCGGTHSVALTRDGRMFS 328
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVT-----------HIACGGSTSAAV 158
+G G HG+LG+ PM ++ T ++ACGG + A+
Sbjct: 329 YGRGDHGRLGYGRKLTTGQPMGVDIDLPPPKTRSSRDGQWQAKYVACGGRHTLAI 383
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 17/178 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+ WG E +G+LG+G + A V+AL V AV G ++ + E+G+L
Sbjct: 10 VLAWGSGE-DGQLGMGGNEEKDWA------HCVEALGSYAVTAVVAGSRNSLAICEDGRL 62
Query: 61 WNWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N LG + P + L ++I+Q A GG+H LA+ D+G ++WG
Sbjct: 63 FTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAWGGNE 122
Query: 120 HGQLGH--------SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+GQ G + + +P V +A GG+ S +T++G ++ WG
Sbjct: 123 YGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVWTWGQ 180
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG+ + +LG G + L + + G +SLA+ +DG++F+WG+ G
Sbjct: 13 WGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWGWNQRGT 72
Query: 123 LGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LGH T+ + P + ALA + A GG AV + G Y WG + Q G
Sbjct: 73 LGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAWGGNEYGQCG 127
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V +WG G GQLG + + +EAL VT + G S A+ E G+L+ WG +
Sbjct: 10 VLAWGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWGWNQ 69
Query: 172 DSQLGVPGLPVVQPCP 187
LG P + P
Sbjct: 70 RGTLGHPPKTKTESSP 85
>gi|67479661|ref|XP_655212.1| Ras guanine nucleotide exchange factor [Entamoeba histolytica
HM-1:IMSS]
gi|56472332|gb|EAL49825.1| Ras guanine nucleotide exchange factor, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 970
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 55/141 (39%), Positives = 85/141 (60%), Gaps = 3/141 (2%)
Query: 28 LSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN 87
+ IP K++ +P P+ VS G +F +VL++ G+L++WGA +LG + KP+ +P
Sbjct: 91 IKIPQKIEGVPKPIDKVSVGSYFCVVLSK-GKLYSWGAYEGGQLGIQEVFNPSKPESIPQ 149
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
+ D++ + GGYH+LAL G+VFSWG GQLG T +++P I L V+
Sbjct: 150 INDIK--DVCCGGYHTLALNIWGEVFSWGKNEFGQLGRINTSKKEIPSQIPTLRGCVVSR 207
Query: 148 IACGGSTSAAVTEKGKLYMWG 168
I CGG SA +T++G Y+WG
Sbjct: 208 IFCGGFCSACITDQGMGYIWG 228
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
I +++ G Y + L+ GK++SWG GQLG N P I + D + + CGG
Sbjct: 104 IDKVSVGSYFCVVLSK-GKLYSWGAYEGGQLGIQEVFNPSKPESIPQIND--IKDVCCGG 160
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ A+ G+++ WG + QLG
Sbjct: 161 YHTLALNIWGEVFSWGKNEFGQLG 184
>gi|67478782|ref|XP_654773.1| Ras guanine nucleotide exchange factor [Entamoeba histolytica
HM-1:IMSS]
gi|56471848|gb|EAL49387.1| Ras guanine nucleotide exchange factor, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 970
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 55/141 (39%), Positives = 85/141 (60%), Gaps = 3/141 (2%)
Query: 28 LSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN 87
+ IP K++ +P P+ VS G +F +VL++ G+L++WGA +LG + KP+ +P
Sbjct: 88 IKIPQKIEGVPKPIDKVSVGSYFCVVLSK-GKLYSWGAYEGGQLGIQEVFNPSKPESIPQ 146
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
+ D++ + GGYH+LAL G+VFSWG GQLG T +++P I L V+
Sbjct: 147 INDIK--DVCCGGYHTLALNIWGEVFSWGKNEFGQLGRINTSKKEIPSQIPTLRGCVVSR 204
Query: 148 IACGGSTSAAVTEKGKLYMWG 168
I CGG SA +T++G Y+WG
Sbjct: 205 IFCGGFCSACITDQGMGYIWG 225
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
I +++ G Y + L+ GK++SWG GQLG N P I + D + + CGG
Sbjct: 101 IDKVSVGSYFCVVLSK-GKLYSWGAYEGGQLGIQEVFNPSKPESIPQIND--IKDVCCGG 157
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ A+ G+++ WG + QLG
Sbjct: 158 YHTLALNIWGEVFSWGKNEFGQLG 181
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 8/172 (4%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S+P +V+ L V ++ G F + L E+G LW WG N +LG GD +
Sbjct: 181 PGDIKQISVPVRVQGLE-KVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ 239
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK----VPMVI 137
P + L + ++ IA GG+HS ALTDDG+V+ WG G HG+LG F N K VP +
Sbjct: 240 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG--FGDNDKSSKMVPQKV 297
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
LA E + ++CGG+ S A+T+ G+++ +G +LG G V PVE
Sbjct: 298 NLLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGY-GKKVTTGQPVE 348
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L WG E +G+LG+G E + + + ++ P V +V G ++ + ++G+L+
Sbjct: 7 LIAWGAGE-DGQLGIGINE---EKEWVCVVNALE--PYKVRSVVAGSRNSLAICDDGKLF 60
Query: 62 NWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N LG P + L +V I+Q A GG+H LA+ D G+ ++WG +
Sbjct: 61 TWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 121 GQLGHS--------FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
GQ G T + + + V +A GG+ S +T +G ++ WG
Sbjct: 121 GQCGEEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQ 177
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WGA + +LG G ++ L ++ + G +SLA+ DDGK+F+WG+ G
Sbjct: 10 WGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 123 LGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LGH + T+ + +P ++AL + + A GG AV ++G+ Y WG + Q G
Sbjct: 70 LGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y WGR E GRLG G N+ +P KV L + +SCGG ++ LT++G+
Sbjct: 269 EVYGWGRGE-HGRLGFGD----NDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGR 323
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
++++G + LG G +V +P +P +
Sbjct: 324 MFSFGRGDHGRLGYGKKVTTGQPVEVPTDI 353
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
+ +WG G GQLG + ++ V+ AL V + G S A+ + GKL+ WG +
Sbjct: 7 LIAWGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQ 66
Query: 172 DSQLGVPGLPVVQPCPVE 189
LG P + P +
Sbjct: 67 RGTLGHPAETKTENIPSQ 84
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G +IP V L + V VSCG T+ +TE
Sbjct: 276 ELYTWGRG-NYGRLGHGSSEDQ------TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 328
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ I+++ G S+ALT DG+V+SWG
Sbjct: 329 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGK 388
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 389 GDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF 447
Query: 178 PGLPVVQPCP 187
L + +P P
Sbjct: 448 DTLRITKPQP 457
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 94/170 (55%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + +P ++ AL V AV GG M LT +G++++WG +
Sbjct: 1212 GRLGLGIS-----SGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 1266
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS A+T G++++WG G +G+LGH
Sbjct: 1267 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 1326
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 1327 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 1376
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E+++WG +G GRLG G P P LS K V ++CG ++ +T E
Sbjct: 220 EVFSWGCGDG-GRLGHGDTVPLEEPKMISALSGKQAGKH----VVHIACGSTYSAAITAE 274
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSW 115
G+L+ WG + LG G P L+ L +++I ++ +G +LA+T++G+V+SW
Sbjct: 275 GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSW 334
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G +G+LG + K P +IE L D + + CG S A+T+ G++Y WG + +L
Sbjct: 335 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRL 394
Query: 176 G 176
G
Sbjct: 395 G 395
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 10/172 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG + +G+LG ++ P ++AL + ++CG + +T G+
Sbjct: 1257 KVFSWGEGD-DGKLGHFSRMNCDK------PRLIEALKTKRIRDIACGSSHSAAITSSGE 1309
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD KPK++ L+ R+IQ+A G +LALTD+G VFSWG
Sbjct: 1310 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 1369
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G G+LG ++ VP IE L + V I CG S A+T+ G ++ WG
Sbjct: 1370 GDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGR 1421
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 1150 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 1202
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L + V+ + + +GG H++ALT DGKVFSWG
Sbjct: 1203 VYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 1262
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 1263 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG 1322
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + V AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 2248 TLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESL 2307
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ IA GG HS +T G ++SWG G +G+LGH +++Q P ++EAL V I
Sbjct: 2308 RGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDI 2367
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 2368 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 2397
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+LY+WG+ GR G LG G ++ P V+AL V ++CG T+ LT+
Sbjct: 2330 DLYSWGK----GRYGRLGHGDSEDQLK----PKLVEALQGYRVIDIACGSGDAQTLCLTD 2381
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 2382 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 2441
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 2442 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 2501
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 2385 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 2437
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 2438 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 2497
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + + +ACG + + A
Sbjct: 2498 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 2534
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 90/162 (55%), Gaps = 12/162 (7%)
Query: 21 GPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW 80
GP GL+ + VK VAA S G + + L G++++WG LG GD V
Sbjct: 188 GPQLVQGLASRNIVK-----VAAHSDGHHY-LALAATGEVFSWGCGDGGRLGHGDTVPLE 241
Query: 81 KPKLLPNL----VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMV 136
+PK++ L ++ IA G +S A+T +G++++WG G +G+LGH +++Q +PM+
Sbjct: 242 EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML 301
Query: 137 IEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+ L V ++CG + + AVTE G+++ WG+ +LG
Sbjct: 302 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG 343
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + + V CG F++ LT++GQ
Sbjct: 330 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQ 382
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L +++ +A G H LALT+D +V SWG
Sbjct: 383 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSND 442
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 443 QCQHFDTLRITKPQPSALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 493
Query: 180 LPVVQPCPV 188
VV CP+
Sbjct: 494 PFVVDVCPM 502
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 78/142 (54%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS D +G P+L+ L I+++A +
Sbjct: 158 VTQIACAEKRFLILSRNGRVYVQAYNS-------DTLG---PQLVQGLASRNIVKVAAHS 207
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+VFSWG G G+LGH T + P +I AL A + V HIACG +
Sbjct: 208 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 267
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 268 SAAITAEGELYTWGRGNYGRLG 289
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 2171 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 2230
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ FV +A GG A++ +G++Y WG A+D +L
Sbjct: 2231 GAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 2290
Query: 176 G 176
G
Sbjct: 2291 G 2291
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 80/188 (42%), Gaps = 38/188 (20%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N +P ++ L V + CG F++ LT+ G +
Sbjct: 1364 VFSWG-DGDFGKLGRGGSEGCN------VPQNIERLNGQGVCQIECGAQFSLALTKSGVV 1416
Query: 61 WNWGANSNYELGRGD-------------RVGGWKPKLLP----NLVDVR-----IIQIA- 97
W WG EL R D RV L+P LV R I+ I
Sbjct: 1417 WTWGRGDFGEL-RPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIER 1475
Query: 98 NGGYHSLA------LTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
N G S +V++WG HGQ G+ T + P +++ L + +T +ACG
Sbjct: 1476 NSGISSFCGQQGERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 1535
Query: 152 GSTSAAVT 159
S S A T
Sbjct: 1536 SSHSVAWT 1543
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 1133 LIRKKASGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 1191
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 1192 KSLFAVTVEGKVYACGEATNGRLGL 1216
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 94/172 (54%), Gaps = 8/172 (4%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S+P +V+ L V ++ G F + L E+G LW WG N +LG GD +
Sbjct: 181 PGDIKQISVPVRVQGLE-RVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ 239
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK----VPMVI 137
P + L + ++ IA GG+HS ALTDDG+V+ WG G HG+LG F N K VP +
Sbjct: 240 PITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG--FGDNDKSSKMVPQRV 297
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
L E + ++CGG+ S A+T G++Y +G +LG G V P+E
Sbjct: 298 NLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGY-GRKVTTGQPME 348
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 23/175 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
L+ WG +E G+LG G + S P V+ L + + ++ GG+ + LT++G++
Sbjct: 218 LWAWGNNE-YGQLGTG------DTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEV 270
Query: 61 WNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG + LG GD K P+ + LV I+Q++ GG HS+ALT DG+++++G G
Sbjct: 271 YGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRG 330
Query: 119 GHGQLGH----SFTQNQKVPMVI---EALADE------FVTHIACGGSTSAAVTE 160
HG+LG+ + Q +VP+ I + L D +A GG + A+ E
Sbjct: 331 DHGRLGYGRKVTTGQPMEVPIDIPPPKNLTDSGDAGRWIAKLVASGGRHTLAIVE 385
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
+ E + WG+ + +LG G+ ++ L ++ + G +SLA+ DDGK+F
Sbjct: 1 MATESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLF 60
Query: 114 SWGYGGHGQLGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+WG+ G LGH T+ + +P ++ALA+ + A GG AV ++G+ Y WG +
Sbjct: 61 TWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 173 SQLG 176
Q G
Sbjct: 121 GQCG 124
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 17/178 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+ WG E +G+LG+G E + I VKAL P V +V G ++ + ++G+L
Sbjct: 7 VIAWGSGE-DGQLGIGNN---EEKEWVCI---VKALEPYKVRSVVAGSRNSLAICDDGKL 59
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N LG P + L +V I+Q A GG+H LA+ D G+ ++WG
Sbjct: 60 FTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 120 HGQLGHSFTQNQ------KVPMVI--EALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+GQ G + + +VI + V +A GG+ S +T +G ++ WG
Sbjct: 120 YGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWGQ 177
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 106 LTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
+ + V +WG G GQLG + ++ +++AL V + G S A+ + GKL+
Sbjct: 1 MATESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLF 60
Query: 166 MWGNAKDSQLGVP 178
WG + LG P
Sbjct: 61 TWGWNQRGTLGHP 73
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 101/196 (51%), Gaps = 20/196 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WGR E +G+LGLG + P + AL + ++CG T+VLTEEG++
Sbjct: 3 VYSWGRGE-DGQLGLGDTSDQHR------PVPIDALAERRIVQIACGSGHTVVLTEEGEV 55
Query: 61 WNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG + LG GD GWK P+L+ L I Q+ G YH+ A+T G +++WG G
Sbjct: 56 YTWGRGDDGRLGHGD--NGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGG 113
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+G+LGH P ++E L V +ACG + + E +Y WG D + GV
Sbjct: 114 MYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWG---DKENGVS 170
Query: 179 GLPVVQ-----PCPVE 189
G + PCPVE
Sbjct: 171 GHGDTEGHQYLPCPVE 186
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 99/191 (51%), Gaps = 8/191 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++YTWG D+ G G G G +P V+ L + +S GF T L+E G+
Sbjct: 158 DVYTWG-DKENGVSGHGDTEGHQ-----YLPCPVEELRGKSIVQISACGFHTAALSEFGE 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ +G LG + + L R+ Q+A GG+H+ A+T+ G+V++WG G
Sbjct: 212 VFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGE 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
HGQLGH N+ VP +E+L ++ V I CG S + +T+ G++Y WGN +LG
Sbjct: 272 HGQLGHGDKVNKTVPTRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHND 331
Query: 180 L-PVVQPCPVE 189
V P PV+
Sbjct: 332 TAKVTLPKPVD 342
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 106/224 (47%), Gaps = 49/224 (21%)
Query: 1 ELYTWGRDEGEGRLGLGPG------------RGPN------------------------- 23
E+YTWGR + +GRLG G RG N
Sbjct: 54 EVYTWGRGD-DGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGG 112
Query: 24 ---------EAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR 73
G S P V+ L + V V+CG T+VL E ++ WG N G
Sbjct: 113 GMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGH 172
Query: 74 GDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
GD G + P + L I+QI+ G+H+ AL++ G+VF++G G G+LGH+ +NQ
Sbjct: 173 GDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQP 232
Query: 133 VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V ++ALA + V +ACGG +AAVTE G++Y WG + QLG
Sbjct: 233 VARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLG 276
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++T+G EG+ G G N + V AL V V+CGGF T +TE G+
Sbjct: 211 EVFTFG----EGKFGR---LGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGE 263
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG + +LG GD+V P + +L++ ++QI G H++ LTD G+V++WG G
Sbjct: 264 VYTWGGGEHGQLGHGDKVNKTVPTRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWGNGD 323
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
HG+LGH+ T +P ++ L + V +A + A+ +
Sbjct: 324 HGKLGHNDTAKVTLPKPVDVLDGKRVISVASYNEHTVALVD 364
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 103/180 (57%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG G+LGLG G + L+ P ++ P V VSCG T+ LT G+
Sbjct: 6 ELYCWG-STSHGQLGLG---GIEDEQILT-PRQIPWTPDTAVQQVSCGHRHTLFLTATGK 60
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+N +LG + +P+L+P L D IIQI+ G HSLAL+D G+V SWG
Sbjct: 61 VYACGSNDYSQLGHD--LPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118
Query: 120 HGQLGHSFTQNQ--KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH+ T+ + ++P V+ L + V IACG + S A+T G+LY WG+ QLGV
Sbjct: 119 CGQLGHA-TEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 99/179 (55%), Gaps = 6/179 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + G+LG+ PN+ + P ++ L +P+AA++CGG + ++++ G
Sbjct: 163 ELYSWGSN-IYGQLGVN---SPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGA 218
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + + A G S+ LT++G VF+ G G
Sbjct: 219 VFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGA 278
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH F+ N+ +P ++ L +T +ACG T A V +GK+Y +G QLG
Sbjct: 279 YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGT 337
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LGL N+ + P+++K L + V +CG F++ LT EG +
Sbjct: 219 VFGWGRNNC-GQLGL------NDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGV 271
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+++ L+ I Q+A G H+LA GKV+++G G
Sbjct: 272 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGS 331
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG T++ +P V+
Sbjct: 332 SGQLGTRSTKSLMLPQVV 349
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 104/188 (55%), Gaps = 15/188 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG P ++ AL + VA VSCG ++ + +G+++ WGA
Sbjct: 21 DNSRGQLGRKGTPRGEQ-------PERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGA 73
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L D++IIQ+A G YHSLAL++DG+VFSWG HGQ
Sbjct: 74 ASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQLG 133
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--L 180
LG F +Q P + +L + +A GG+ S A++ G + WG+ QL + G
Sbjct: 134 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNA 192
Query: 181 PVVQPCPV 188
PV + PV
Sbjct: 193 PVQRYKPV 200
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 59/180 (32%), Positives = 99/180 (55%), Gaps = 11/180 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG EG+LG+G + IP K+K L + + V+CG + ++ L+E+GQ+
Sbjct: 68 VFAWGA-ASEGQLGIGELKETT-----FIPKKIKTLADIKIIQVACGHYHSLALSEDGQV 121
Query: 61 WNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 122 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNN 181
Query: 120 HGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQL G++ + P+++ AL V I+CG +A +T+ GK++ +G+ QLG
Sbjct: 182 AGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLG 241
Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 19/192 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 120 QVFSWGKNS-HGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGT 173
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+N+ +L G V +KP L+ L + ++ I+ G H+ LT DGKVF++G
Sbjct: 174 SFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFG 233
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQL 175
+GQLGH T ++ P ++E + + V+ I CG T A V G++ +G
Sbjct: 234 DNSYGQLGHDSTAEKRGPQLVERI-EGLVSQIDCGSYHTLAYVYTTGQVVSFGRG----- 287
Query: 176 GVPGLPVVQPCP 187
PG P P
Sbjct: 288 --PGCTRSSPHP 297
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
G +++L +G + + G NS +LGR G +P+ +P L + + ++ G HSLA+
Sbjct: 3 GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAV 62
Query: 107 TDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
G+VF+WG GQLG + +P I+ LAD + +ACG S A++E G+++
Sbjct: 63 CHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVF 122
Query: 166 MWGNAKDSQLGV 177
WG QLG+
Sbjct: 123 SWGKNSHGQLGL 134
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 43/80 (53%)
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
+G +HSL L DG V S G GQLG T + P I AL V ++CG S A
Sbjct: 2 SGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLA 61
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
V KG+++ WG A + QLG+
Sbjct: 62 VCHKGRVFAWGAASEGQLGI 81
>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 2290
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
V+CG +M LT+ GQ++ WG N+ +LG+G R KP ++ +++V I +G HS
Sbjct: 346 VACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPTMI--IIEVMATSICSGDQHS 403
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
++D+ ++++WG G + +LGH T ++ P + L D +VTH++CG + + A+T +G
Sbjct: 404 AFISDEKELYTWGNGQYFRLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGF 463
Query: 164 LYMWGNAKDSQLGV 177
+Y WG+ +LGV
Sbjct: 464 VYAWGDGMSGKLGV 477
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 18/177 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+++TWG++ R LG G ++ I +V A ++ G + +++E +L
Sbjct: 361 QIFTWGKNT---RGQLGQGHRNDQLKPTMIIIEVMA-----TSICSGDQHSAFISDEKEL 412
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G PK + L DV + ++ G H+LA+T++G V++WG G
Sbjct: 413 YTWGNGQYFRLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMS 472
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G+LG +N K + T ++ GG S A+T++G LY WG++K LG+
Sbjct: 473 GKLG--VQENNK--------SLHLPTRVSAGGLHSMALTDQGILYSWGSSKGGVLGI 519
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 27/159 (16%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNY---------------------ELGRGDRVGG 79
+ VSCG T+V+T++G ++ +G + +LG + V
Sbjct: 270 IKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLGNENFVNV 329
Query: 80 WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP--MVI 137
++P L + IQ+A G HS+ALTD+G++F+WG GQLG +Q P ++I
Sbjct: 330 YEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPTMIII 389
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
E +A T I G SA ++++ +LY WGN + +LG
Sbjct: 390 EVMA----TSICSGDQHSAFISDEKELYTWGNGQYFRLG 424
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/146 (34%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG + LG G +E P KV L V V VSCG T+ +T EG
Sbjct: 411 ELYTWGNGQ---YFRLGHGVTTDEL----YPKKVVVLEDVYVTHVSCGMTHTLAITNEGF 463
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG + +LG + K LP +++ GG HS+ALTD G ++SWG
Sbjct: 464 VYAWGDGMSGKLGVQENN---KSLHLPT-------RVSAGGLHSMALTDQGILYSWGSSK 513
Query: 120 HGQLGHSFTQNQK----VPMVIEALA 141
G LG F ++ K +P I +A
Sbjct: 514 GGVLGIGFQRDNKDCYSLPQKIRTVA 539
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGD--RVGGWKPKLLPNLVDVRIIQIANGGY 101
+SC + ++ +G ++WG+N Y+LG G + K+ L RII
Sbjct: 794 MSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETKRIIMSTCSDR 853
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV---PMVIEALADEFVTHIACGGSTSAAV 158
S LTD G+++++G G LGH +N V P +I + + +A G A+
Sbjct: 854 FSALLTDKGEIWTFGTSDSGVLGHD-EKNYYVVSEPKMINDIPP--MIFLASGPQGMMAI 910
Query: 159 TE-KGKLYMWGNAKDSQLGV 177
TE K ++Y WGN QLG+
Sbjct: 911 TEQKRQIYAWGNNLYGQLGI 930
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 73/135 (54%), Gaps = 17/135 (12%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALPVP-VAAVSCGGFFTMVLTEEGQL 60
Y+WG ++ +LGLG N IP K++ AL + +C F+ +LT++G++
Sbjct: 811 YSWGSNKYY-QLGLGYMCKYNH-----IPQKIQGALETKRIIMSTCSDRFSALLTDKGEI 864
Query: 61 WNWGANSNYELGRGDR----VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSW 115
W +G + + LG ++ V +PK++ ++ +I +A+G +A+T+ + +++W
Sbjct: 865 WTFGTSDSGVLGHDEKNYYVVS--EPKMINDIPP--MIFLASGPQGMMAITEQKRQIYAW 920
Query: 116 GYGGHGQLGHSFTQN 130
G +GQLG T N
Sbjct: 921 GNNLYGQLGIQITNN 935
Score = 42.7 bits (99), Expect = 0.066, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIE-A 139
P L+P + +II ++ H++A++ G +SWG + QLG + + +P I+ A
Sbjct: 781 PFLIPYFKN-KIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGA 839
Query: 140 LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
L + + C SA +T+KG+++ +G + LG
Sbjct: 840 LETKRIIMSTCSDRFSALLTDKGEIWTFGTSDSGVLG 876
Score = 39.7 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVT 146
I+ I+ G H+LA+ +GKVFSWG +G+LG S T N +P D+F T
Sbjct: 1138 IVYISAGLMHNLAMNKNGKVFSWGSFQNGRLGIS-TTNLNLP------PDQFFT 1184
>gi|355749435|gb|EHH53834.1| E3 ISG15--protein ligase HERC5 [Macaca fascicularis]
Length = 854
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 109/192 (56%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + + P V+ L VP+A +S G +M L+ G
Sbjct: 83 ELFAWGQN-LHGQLGVG-----RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN 136
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + ++ +A GG HS LT DG +F++G G
Sbjct: 137 IYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGK 196
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ KD QLG
Sbjct: 197 HGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNG 256
Query: 179 G-LPVVQPCPVE 189
G L + P PV+
Sbjct: 257 GTLDQLIPLPVK 268
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 2/169 (1%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV-GGW 80
P G S K +A P A G + + G+L+ WG N + +LG G +
Sbjct: 46 PRNQGVSSGALKKRATPTSHALRRGQGNLSRFIVRGGELFAWGQNLHGQLGVGRKFPSTT 105
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
P+++ +L V + QI+ G HS+AL+ G ++SWG GQLG T+++ P +IEAL
Sbjct: 106 TPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEAL 165
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLP-VVQPCPV 188
++ V +ACGGS SA +T+ G L+ +G K QLG ++PC V
Sbjct: 166 DNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV 214
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 86/144 (59%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG++E G+LGLG + PS ++AL V ++CGG + +LT++G L
Sbjct: 137 IYSWGKNEF-GQLGLGHTESKDS------PSLIEALDNQKVEFLACGGSHSALLTQDGLL 189
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA-LTDDGKVFSWGYGG 119
+ +GA + +LG +P L+ LV R+ QIA G +H+LA ++D GKVFS+G G
Sbjct: 190 FTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGK 249
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T +Q +P+ ++ + E
Sbjct: 250 DGQLGNGGTLDQLIPLPVKVSSSE 273
>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 816
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 108/192 (56%), Gaps = 11/192 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFF--TMVLTEEG 58
LYTWGR GRLG G A P+ + AL + V+CG F+ T+ +T +G
Sbjct: 588 LYTWGRG-NYGRLGHGT------AEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQG 640
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++++WG +LGRG G P+L+ L +V+I+Q+ G S+AL++DG V++WG G
Sbjct: 641 KVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKG 700
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL-GV 177
+LGH +N + P ++E L D V ++ G S A+T++G++Y WG ++ Q+
Sbjct: 701 EGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDS 760
Query: 178 PGLPVVQPCPVE 189
L V QP +E
Sbjct: 761 SELFVQQPRLIE 772
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 96/181 (53%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG +G GRLG G E P+ ++AL + V CGG ++ ++ G
Sbjct: 535 EVYSWGNGDG-GRLGHGDTSTKEE------PTLIQALKGKDIIDVECGGTYSAAISANGA 587
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG + LG G P ++ L D II++A G + H+L +T GKV+SWG
Sbjct: 588 LYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGD 647
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LG + K+P +IE L + + + CG S A++E G +Y WG + +LG
Sbjct: 648 GDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGH 707
Query: 178 P 178
P
Sbjct: 708 P 708
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 85/152 (55%), Gaps = 7/152 (4%)
Query: 31 PSKVKALP----VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP 86
P ++ AL + +AA G + + LT++ ++++WG LG GD +P L+
Sbjct: 504 PQEMTALDDKEVIKIAAHPEGKHY-LALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQ 562
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVT 146
L II + GG +S A++ +G +++WG G +G+LGH ++ P +I AL+DE +
Sbjct: 563 ALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHII 622
Query: 147 HIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+ACG + + +T +GK+Y WG+ +LG
Sbjct: 623 KVACGSFYAHTLCITSQGKVYSWGDGDYGKLG 654
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 20/160 (12%)
Query: 19 GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG 78
G GP LS + + + C ++LT+ G+++ +S+ +
Sbjct: 459 GVGPQNCDTLS--------ELTIKQICCSDRTILILTQTGKVFFMYYSSDTQC------- 503
Query: 79 GWKPKLLPNLVDVRIIQIANG--GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMV 136
P+ + L D +I+IA G H LALT D +V+SWG G G+LGH T ++ P +
Sbjct: 504 ---PQEMTALDDKEVIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTL 560
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
I+AL + + + CGG+ SAA++ G LY WG +LG
Sbjct: 561 IQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLG 600
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 85/164 (51%), Gaps = 8/164 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG D G+LG G G +P ++ L V + V CG F++ L+E+G
Sbjct: 641 KVYSWG-DGDYGKLGRGGSDGSK------LPRLIEKLQNVKIVQVYCGAQFSVALSEDGH 693
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG ++LG P+++ L D +++ ++ G H LALTD G+V+ WG
Sbjct: 694 VYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNE 753
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
+ Q+ S + P +IEAL + V + CG + S A T+ +
Sbjct: 754 NKQICDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNE 797
>gi|355687448|gb|EHH26032.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 883
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 109/192 (56%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + + P V+ L VP+A +S G +M L+ G
Sbjct: 91 ELFAWGQN-LHGQLGVG-----RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN 144
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + ++ +A GG HS LT DG +F++G G
Sbjct: 145 IYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGK 204
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ KD QLG
Sbjct: 205 HGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNG 264
Query: 179 G-LPVVQPCPVE 189
G L + P PV+
Sbjct: 265 GTLDQLIPLPVK 276
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 2/136 (1%)
Query: 55 TEEGQLWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
T G+L+ WG N + +LG G + P+++ +L V + QI+ G HS+AL+ G ++
Sbjct: 87 TPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY 146
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
SWG GQLG T+++ P +IEAL ++ V +ACGGS SA +T+ G L+ +G K
Sbjct: 147 SWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG 206
Query: 174 QLGVPGLP-VVQPCPV 188
QLG ++PC V
Sbjct: 207 QLGHNSTQNELRPCLV 222
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 86/144 (59%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG++E G+LGLG + PS ++AL V ++CGG + +LT++G L
Sbjct: 145 IYSWGKNEF-GQLGLGHTESKDS------PSLIEALDNQKVEFLACGGSHSALLTQDGLL 197
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA-LTDDGKVFSWGYGG 119
+ +GA + +LG +P L+ LV R+ QIA G +H+LA ++D GKVFS+G G
Sbjct: 198 FTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGK 257
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T +Q +P+ ++ + E
Sbjct: 258 DGQLGNGGTLDQLIPLPVKVSSSE 281
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 105 ALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
A T G++F+WG HGQL G F + P ++E LA + I+ G + S A++ G
Sbjct: 85 ARTPSGELFAWGQNLHGQLGVGRKFP-STTTPQIVEHLAGVPLAQISAGEAHSMALSMSG 143
Query: 163 KLYMWGNAKDSQLGV 177
+Y WG + QLG+
Sbjct: 144 NIYSWGKNEFGQLGL 158
>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
Length = 923
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 67/181 (37%), Positives = 103/181 (56%), Gaps = 8/181 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G A P V+ L VP+A +S G +M L+ G
Sbjct: 56 ELFAWGQNL-HGQLGVGKIFDSTTA-----PQIVEHLSGVPLAQISAGKSHSMALSVSGN 109
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + ++ +A GG H+ LT DG VF++G G
Sbjct: 110 IYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLTKDGLVFTFGAGK 169
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
+GQLGH+ TQN+ P ++ LA VT +ACG T A V++ GK++ +G+ ++ QLG
Sbjct: 170 YGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLGKVFSFGSGEEGQLGNG 229
Query: 179 G 179
G
Sbjct: 230 G 230
Score = 99.4 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 49/137 (35%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N + +LG G P+++ +L V + QI+ G
Sbjct: 38 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAG 97
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ G ++SWG GQLG T ++ P +IEAL ++ V +ACGGS +A +T
Sbjct: 98 KSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLT 157
Query: 160 EKGKLYMWGNAKDSQLG 176
+ G ++ +G K QLG
Sbjct: 158 KDGLVFTFGAGKYGQLG 174
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WGR++ G+LGLG PS ++AL V ++CGG T +LT++G +
Sbjct: 110 IYSWGRNDF-GQLGLG------HTDDKDFPSLIEALENQKVEFLACGGSHTALLTKDGLV 162
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA +LG +P L+ L R+ Q+A G H+LA D GKVFS+G G
Sbjct: 163 FTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLGKVFSFGSGE 222
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T NQ +P+ ++ ++E
Sbjct: 223 EGQLGNGGTHNQLIPLPMKLPSNE 246
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVT 146
L + IIQI G YHSLAL+ G++F+WG HGQLG + P ++E L+ +
Sbjct: 33 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLA 92
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
I+ G S S A++ G +Y WG QLG+
Sbjct: 93 QISAGKSHSMALSVSGNIYSWGRNDFGQLGL 123
Score = 40.4 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H L L+ DGK F + Y + H+ Q L ++ + I CG S A+
Sbjct: 4 GAEHMLILSSDGKPFEYNY----SIEHARFQC--------ILQEKNIIQITCGDYHSLAL 51
Query: 159 TEKGKLYMWGNAKDSQLGV 177
++ G+L+ WG QLGV
Sbjct: 52 SKGGELFAWGQNLHGQLGV 70
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 108/192 (56%), Gaps = 11/192 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFF--TMVLTEEG 58
LYTWGR GRLG G A P+ + AL + V+CG F+ T+ +T +G
Sbjct: 588 LYTWGRG-NYGRLGHGT------AEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQG 640
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++++WG +LGRG G P+L+ L +V+I+Q+ G S+AL++DG V++WG G
Sbjct: 641 KVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKG 700
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL-GV 177
+LGH +N + P ++E L D V ++ G S A+T++G++Y WG ++ Q+
Sbjct: 701 EGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDS 760
Query: 178 PGLPVVQPCPVE 189
L V QP +E
Sbjct: 761 SELFVQQPRLIE 772
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 96/181 (53%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG +G GRLG G E P+ ++AL + V CGG ++ ++ G
Sbjct: 535 EVYSWGNGDG-GRLGHGDTSTKEE------PTLIQALKGKDIIDVECGGTYSAAISANGA 587
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG + LG G P ++ L D II++A G + H+L +T GKV+SWG
Sbjct: 588 LYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGD 647
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LG + K+P +IE L + + + CG S A++E G +Y WG + +LG
Sbjct: 648 GDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGH 707
Query: 178 P 178
P
Sbjct: 708 P 708
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 18/185 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L + V + CG F++ LT+ G++
Sbjct: 3108 VFSWG-DGDFGKLGRGGSEGCN------IPHNIERLNALEVVQIECGAQFSLALTKTGEV 3160
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G KP ++ +L D ++I +A G H LA+TD G+V++WG H
Sbjct: 3161 WTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDH 3220
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQ G+ T + P ++ L D + +ACG S S A T +D+Q+
Sbjct: 3221 GQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWT----------LQDTQVVSKVE 3270
Query: 181 PVVQP 185
PV+ P
Sbjct: 3271 PVIFP 3275
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELYTWG E GRLG G + P +K+L + V+CG T+ LT+E
Sbjct: 3053 ELYTWGLGE-YGRLGHGDNITQLK------PKLIKSLVGHRIVQVACGSRDAQTLALTDE 3105
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L + ++QI G SLALT G+V++WG
Sbjct: 3106 GWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGK 3165
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P VIE+L D+ V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3166 GDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3224
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 99/182 (54%), Gaps = 14/182 (7%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTE 56
+LY G EG GRLGLG + + P + L + AV GG M LT
Sbjct: 2947 KLYACG--EGTNGRLGLG------HSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTL 2998
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+G++++WG + +LG G+R+ KPK++ L +I IA G HS A+T G++++WG
Sbjct: 2999 DGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWG 3058
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQ 174
G +G+LGH Q P +I++L + +ACG + + A+T++G ++ WG+ +
Sbjct: 3059 LGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGK 3118
Query: 175 LG 176
LG
Sbjct: 3119 LG 3120
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P+ +A S F +++ EG+L+ G +N LG G P+ +P L I ++A
Sbjct: 2929 PIHIAGGSKSLF---IVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVA 2985
Query: 98 --NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTS 155
+GG H++ALT DGKVFSWG G G+LGH N P +IEAL + + IACG S S
Sbjct: 2986 VHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHS 3045
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
AA+T G+LY WG + +LG
Sbjct: 3046 AAITSSGELYTWGLGEYGRLG 3066
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT G +
Sbjct: 4084 VWSWG-DGDYGKLGRGG------SDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSV 4136
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L +II IA G H +A +D+G+VF+WG
Sbjct: 4137 YTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDE 4196
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + +T++ACG + + A
Sbjct: 4197 GQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTLA 4233
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 85/150 (56%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ + +++WG + +LG G+R+ PKL+ L
Sbjct: 3947 TLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEAL 4006
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
II IA GG HS A+T G++++WG G +G+LGH +++Q P +IE L V +
Sbjct: 4007 QGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDV 4066
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4067 ACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4096
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 6/185 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LYTWG+ GR G LG G ++ I V + VA S G T+ +T++
Sbjct: 4029 QLYTWGK----GRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGS-GDAQTLCITDDDN 4083
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PK + +L + +I++ G S+ALT G V++WG G
Sbjct: 4084 VWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGD 4143
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P + AL + + IA G A +++G+++ WG+ + QLG
Sbjct: 4144 YHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDT 4203
Query: 180 LPVVQ 184
+Q
Sbjct: 4204 TNAIQ 4208
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 8/157 (5%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P E GLS + +K P G + LT++ ++++WG LG GD +
Sbjct: 504 PQEMTGLSGINMIKIAAHP------EGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEE 557
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
P L+ L II + GG +S A++ +G +++WG G +G+LGH ++ P +I AL+
Sbjct: 558 PTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALS 617
Query: 142 DEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
DE + +ACG + + +T +GK+Y WG+ +LG
Sbjct: 618 DEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLG 654
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 85/164 (51%), Gaps = 8/164 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG D G+LG G G +P ++ L V + V CG F++ L+E+G
Sbjct: 641 KVYSWG-DGDYGKLGRGGSDGSK------LPRLIEKLQNVKIVQVYCGAQFSVALSEDGH 693
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG ++LG P+++ L D +++ ++ G H LALTD G+V+ WG
Sbjct: 694 VYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNE 753
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
+ Q+ S + P +IEAL + V + CG + S A T+ +
Sbjct: 754 NKQICDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNE 797
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGKV++ GY
Sbjct: 3870 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGY 3929
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T + VP ++E++ F+ IA GG A++ +Y WG D +L
Sbjct: 3930 GAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKL 3989
Query: 176 G 176
G
Sbjct: 3990 G 3990
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 59 QLWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+++ WG N +LG +G +V P L + I IA G ++ +GK+++ G
Sbjct: 2895 RVFVWGLNDKDQLGGMKGSKVK--LPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACG 2952
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQ 174
G +G+LG + N P I L+ + +A GG + A+T GK++ WG +D +
Sbjct: 2953 EGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGK 3012
Query: 175 LG 176
LG
Sbjct: 3013 LG 3014
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+VF WG QLG K+P+ + L+ + HIA G + V+ +GKLY G
Sbjct: 2895 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEG 2954
Query: 171 KDSQLGV---PGLPVVQPCP 187
+ +LG+ +P +P P
Sbjct: 2955 TNGRLGLGHSNNVPYPRPIP 2974
>gi|428184753|gb|EKX53607.1| hypothetical protein GUITHDRAFT_160884 [Guillardia theta CCMP2712]
Length = 308
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 90/148 (60%), Gaps = 8/148 (5%)
Query: 37 LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR-VGGWKPKLLPNLVDVRIIQ 95
+P PV VSCG FT+ +TE G++++ G N N ELG + ++P ++ L ++I++
Sbjct: 133 IPEPVIDVSCGKKFTVFVTESGKVYSMGDNKNGELGNPNAGSSSYEPTIVHGLDGIKIVK 192
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQ-------LGHSFTQNQKVPMVIEALADEFVTHI 148
IA G YH LAL+D G+V+SWG+GG G LGH + VP IE L E +T+I
Sbjct: 193 IAAGQYHVLALSDIGEVYSWGWGGSGTPGAGVGALGHGDKASLPVPKRIERLNGEKITNI 252
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+CG S A+++ G ++ WG+ + +LG
Sbjct: 253 SCGAKHSVALSQDGTMFTWGHGEQGRLG 280
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 14/133 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+ G D G LG PN P+ V L + + ++ G + + L++ G+
Sbjct: 155 KVYSMG-DNKNGELG-----NPNAGSSSYEPTIVHGLDGIKIVKIAAGQYHVLALSDIGE 208
Query: 60 LWNWGANSNYE-------LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
+++WG + LG GD+ PK + L +I I+ G HS+AL+ DG +
Sbjct: 209 VYSWGWGGSGTPGAGVGALGHGDKASLPVPKRIERLNGEKITNISCGAKHSVALSQDGTM 268
Query: 113 FSWGYGGHGQLGH 125
F+WG+G G+LGH
Sbjct: 269 FTWGHGEQGRLGH 281
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGR-GPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
E+Y+WG G G G G G G + L +P +++ L + +SCG ++ L+++G
Sbjct: 208 EVYSWGWG-GSGTPGAGVGALGHGDKASLPVPKRIERLNGEKITNISCGAKHSVALSQDG 266
Query: 59 QLWNWGANSNYELGRGDRVGGWKPK 83
++ WG LG G+ +P+
Sbjct: 267 TMFTWGHGEQGRLGHGNNTDFLQPE 291
>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
Length = 957
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 109/192 (56%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + + P V+ L VP+A +S G +M L+ G
Sbjct: 91 ELFAWGQN-LHGQLGVG-----RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN 144
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + ++ +A GG HS LT DG +F++G G
Sbjct: 145 IYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGK 204
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH+ TQN+ P ++ L + VT IACG T A V++ GK++ +G+ KD QLG
Sbjct: 205 HGQLGHNSTQNELRPCLVAELVEYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 264
Query: 179 GL-PVVQPCPVE 189
G + P PV+
Sbjct: 265 GTRDQLMPLPVK 276
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
Query: 55 TEEGQLWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
T G+L+ WG N + +LG G + P+++ +L V + QI+ G HS+AL+ G ++
Sbjct: 87 TPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY 146
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
SWG GQLG T+++ P +IE L ++ V +ACGGS SA +T+ G L+ +G K
Sbjct: 147 SWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHG 206
Query: 174 QLGVPGLP-VVQPCPV 188
QLG ++PC V
Sbjct: 207 QLGHNSTQNELRPCLV 222
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 85/144 (59%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG++E G+LGLG + PS ++ L V V+CGG + +LT++G L
Sbjct: 145 IYSWGKNEF-GQLGLGHTESKD------YPSLIEGLDNQKVEFVACGGSHSALLTQDGLL 197
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA + +LG +P L+ LV+ R+ QIA G +H+LA D GKVFS+G G
Sbjct: 198 FTFGAGKHGQLGHNSTQNELRPCLVAELVEYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 257
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T++Q +P+ ++ + E
Sbjct: 258 DGQLGNGGTRDQLMPLPVKVSSSE 281
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 105 ALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
A T G++F+WG HGQL G F + P ++E LA + I+ G + S A++ G
Sbjct: 85 ARTPSGELFAWGQNLHGQLGVGRKFP-STTTPQIVEHLAGVPLAQISAGEAHSMALSMSG 143
Query: 163 KLYMWGNAKDSQLGV 177
+Y WG + QLG+
Sbjct: 144 NIYSWGKNEFGQLGL 158
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 640 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 694
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ +I++ G S+ALT DG+V+SWG G
Sbjct: 695 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGD 754
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 755 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 813
Query: 180 LPVVQPCPV 188
L V +P P
Sbjct: 814 LRVTKPEPT 822
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3241 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3293
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3294 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3353
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3354 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3392
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
++Y+ G + GRLGLG +G + IP ++ AL V AV GG LT +
Sbjct: 3079 KVYSCG-EATNGRLGLG-----MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3132
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG + +LG R+ KP+L+ L RI IA G HS ALT G++++WG
Sbjct: 3133 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3192
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQL 175
G +G+LGH Q P +++ L V +ACG + + A+T++G ++ WG+ +L
Sbjct: 3193 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3252
Query: 176 G 176
G
Sbjct: 3253 G 3253
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 584 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 641
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 642 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 701
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 702 DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 759
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4097 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4156
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 4157 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDI 4216
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4217 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4246
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 3027 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3079
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
+++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3080 VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3139
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3140 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3199
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3186 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3238
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3239 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3298
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3299 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3357
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4179 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4231
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4232 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4291
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4292 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4350
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4234 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4286
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4287 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4346
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4347 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4383
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 694 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ 746
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 747 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 806
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 807 QCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFA 844
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V V+C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 522 VMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQLVQGLASRNIVKIAAHS 571
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 572 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 631
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 632 SAAITAEGELYTWGRGNYGRLG 653
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 565 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 623
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 624 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 683
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 684 AQTLAVTENGQVWSWGDGDYGKLG 707
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 4020 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4079
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4080 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4139
Query: 176 G 176
G
Sbjct: 4140 G 4140
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 3010 LIRKKTPGLESTA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3068
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3069 KSLFAVTVEGKVYSCGEATNGRLGL 3093
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
ELYTWGR G G LG G +EA IP V L + V V+CG T+ +TE
Sbjct: 572 ELYTWGR----GNYGRLGHGSSEDEA----IPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
GQ+W+WG +LGRG G PKL+ L D+ +I++ G S+ALT DG+V+SWG
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 684 KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-H 742
Query: 177 VPGLPVVQPCPV 188
L V +P P
Sbjct: 743 FDTLRVTKPEPT 754
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3175 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3227
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3287
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3288 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
++Y+ G + GRLGLG +G + IP ++ AL V AV GG LT +
Sbjct: 3013 KVYSCG-EATNGRLGLGMS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3066
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG + +LG R+ KP+L+ L RI IA G HS ALT G++++WG
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3126
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQL 175
G +G+LGH Q P +++ L V +ACG + + A+T++G ++ WG+ +L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 176 G 176
G
Sbjct: 3187 G 3187
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4031 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4090
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 4091 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDI 4150
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4151 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2961 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
+++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3014 VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3133
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3120 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3233 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4113 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4165
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4166 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4225
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4226 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4284
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4168 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4220
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4280
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4281 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 739 QCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFA 776
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V V+C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4073
Query: 176 G 176
G
Sbjct: 4074 G 4074
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2944 LIRKKTAGLESTA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3003 KSLFAVTVEGKVYSCGEATNGRLGL 3027
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G +IP V L + V VSCG T+ +TE
Sbjct: 572 ELYTWGRG-NYGRLGHGSSEDQ------TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ I+++ G S+ALT DG+V++WG
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGK 684
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 685 GDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF 743
Query: 178 PGLPVVQPCP 187
L V +P P
Sbjct: 744 DTLRVTKPEP 753
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG M LT +G++++WG +
Sbjct: 3026 GRLGLGIS-----SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3080
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS A+T G++++WG G +G+LGH
Sbjct: 3081 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3190
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG E +G+LG G R P + P +++L + V V+ GG + +T G
Sbjct: 4064 EVYSWGEAE-DGKLGHG-NRSPCDR-----PRVIESLRGIEVVDVAAGGAHSACITAAGD 4116
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGY 117
L+ WG LG GD KPKL+ L R+I IA +G +L LTDD V+SWG
Sbjct: 4117 LFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGD 4176
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
G +G+LG + KVPM I++L V + CG S A+T+ G +Y W +D
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRD 4231
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3178 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3230
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3231 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3290
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3291 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E+++WG +G GRLG G P P LS K V ++CG ++ +T E
Sbjct: 516 EVFSWGCGDG-GRLGHGDTVPLEEPKMISALSGKQAGKH----VVHIACGSTYSAAITAE 570
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSW 115
G+L+ WG + LG G P L+ L +++I ++ +G +LA+T++G+V+SW
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSW 630
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G +G+LG + K P +IE L D + + CG S A+T+ G++Y WG + +L
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRL 690
Query: 176 G 176
G
Sbjct: 691 G 691
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2964 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3016
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L + V+ + + +GG H++ALT DGKVFSWG
Sbjct: 3017 VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 3076
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3077 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG 3136
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4039 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4098
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ +A GG HS +T G +F+WG G +G+LGH +++Q P ++EAL V IACG
Sbjct: 4099 VDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSG 4158
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4159 DAQTLCLTDDDTVWSWGDGDYGKLG 4183
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3123 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3235
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3236 GDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V V+C ++L+ G+++ NS D +G P+L+ +L I++IA +
Sbjct: 454 VVQVACAEKRFLILSRNGRVYTQAYNS-------DTLG---PQLVQSLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL+ +G+VFSWG G G+LGH T + P +I AL A + V HIACG +
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + + V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 739 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 789
Query: 180 LPVVQPCPV 188
VV CP+
Sbjct: 790 PFVVDVCPM 798
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L+ G++++WG LG GD V +PK++ L ++
Sbjct: 497 VKIAAHSDGHHY-LALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH +++Q +PM++ L V ++CG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4171 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4223
Query: 61 WNWGANSNY-ELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ W +Y LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4224 YTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4283
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + + +ACG + + A
Sbjct: 4284 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4321
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4076
Query: 176 G 176
G
Sbjct: 4077 G 4077
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
A T KVF WG QLG KVP E L+ V +A G + AVT +GK+
Sbjct: 2958 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3017
Query: 165 YMWGNAKDSQLGV 177
Y G A + +LG+
Sbjct: 3018 YACGEATNGRLGL 3030
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 577 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 631
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ +I++ G S+ALT DG+V+SWG G
Sbjct: 632 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGD 691
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 692 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 750
Query: 180 LPVVQPCPV 188
L V +P P
Sbjct: 751 LRVTKPEPT 759
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3180 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3232
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3233 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3292
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3293 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3331
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
++Y+ G + GRLGLG +G + IP ++ AL V AV GG LT +
Sbjct: 3018 KVYSCG-EATNGRLGLG-----MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3071
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG + +LG R+ KP+L+ L RI IA G HS ALT G++++WG
Sbjct: 3072 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3131
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQL 175
G +G+LGH Q P +++ L V +ACG + + A+T++G ++ WG+ +L
Sbjct: 3132 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3191
Query: 176 G 176
G
Sbjct: 3192 G 3192
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 521 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 578
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 579 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 638
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 639 DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 696
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4041 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4100
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V IACG
Sbjct: 4101 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSG 4160
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4161 DAQTLCLTDDDTVWSWGDGDYGKLG 4185
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2966 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3018
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
+++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3019 VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3078
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3079 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3138
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3125 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3177
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3178 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3237
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3238 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3296
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4118 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4170
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4171 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4230
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4231 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4289
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4173 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4225
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4226 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4285
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4286 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4322
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 631 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ 683
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 684 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 743
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 744 QCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFA 781
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V V+C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 459 VMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQLVQGLASRNIVKIAAHS 508
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 509 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 568
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 569 SAAITAEGELYTWGRGNYGRLG 590
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 502 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 560
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 561 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 620
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 621 AQTLAVTENGQVWSWGDGDYGKLG 644
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3959 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4018
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4019 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4078
Query: 176 G 176
G
Sbjct: 4079 G 4079
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2949 LIRKKTPGLESTA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3007
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3008 KSLFAVTVEGKVYSCGEATNGRLGL 3032
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 572 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ +I++ G S+ALT DG+V+SWG G
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGD 686
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 687 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 745
Query: 180 LPVVQPCPV 188
L V +P P
Sbjct: 746 LRVTKPEPT 754
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3175 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3227
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3287
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3288 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
++Y+ G + GRLGLG +G + IP ++ AL V AV GG LT +
Sbjct: 3013 KVYSCG-EATNGRLGLGMS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3066
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG + +LG R+ KP+L+ L RI IA G HS ALT G++++WG
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3126
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQL 175
G +G+LGH Q P +++ L V +ACG + + A+T++G ++ WG+ +L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 176 G 176
G
Sbjct: 3187 G 3187
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4031 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4090
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 4091 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDI 4150
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4151 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2961 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
+++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3014 VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3133
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3120 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3233 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4113 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4165
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4166 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4225
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4226 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4284
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4168 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4220
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4280
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4281 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 739 QCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V V+C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4073
Query: 176 G 176
G
Sbjct: 4074 G 4074
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2944 LIRKKTPGLESTA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3003 KSLFAVTVEGKVYSCGEATNGRLGL 3027
>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
Length = 1052
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 102/179 (56%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG + G+LGLG G + L+ PSK+ P V ++CG T+ LT G+
Sbjct: 2 ELYCWG-NASHGQLGLG---GIEDEQILT-PSKMPWQPDSAVNQIACGHRHTLFLTASGK 56
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+N +LG + +P +P LVD I QIA G HS+ALT+ G+V SWG
Sbjct: 57 VYACGSNDYAQLGH--ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNE 114
Query: 120 HGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH+ Q+ ++P + AL + V IACG + S A+T G+LY WG+ QLGV
Sbjct: 115 CGQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGV 173
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 97/179 (54%), Gaps = 6/179 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG + G+LG+ + P+E G + P + L +PV A++CGG + ++++
Sbjct: 159 ELYAWGSN-IYGQLGV---KTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSA 214
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + + +A G S+ LT++G VF+ G G
Sbjct: 215 VFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 274
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH F N+ +P ++ L ++ +ACG T A V +G++Y +G QLG
Sbjct: 275 YGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGT 333
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 28 LSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DRVGGWKPKLLP 86
L IP V + + ++CG +M LTE GQ+ +WG N +LG D+ PK +
Sbjct: 78 LQIPELVDCV---ITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVR 134
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH---SFTQNQKVPMVIEALADE 143
LV ++QIA G HSLALT G++++WG +GQLG S PM++ L
Sbjct: 135 ALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGI 194
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V IACGG+ S +++ ++ WG QLG+
Sbjct: 195 PVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGL 228
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LGL N+ + P+++K L + V V+CG F++ LT EG +
Sbjct: 215 VFGWGRNNC-GQLGL------NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 267
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+++ L+ I Q+A G H+LA+ G+++ +G G
Sbjct: 268 FTCGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGS 327
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG T++ +P ++
Sbjct: 328 SGQLGTRNTKSLNLPQMV 345
>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Papio anubis]
Length = 1023
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 109/192 (56%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + + P V+ L VP+A +S G +M L+ G
Sbjct: 157 ELFAWGQN-LHGQLGVG-----RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + ++ +A GG HS LT DG +F++G G
Sbjct: 211 VYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGK 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ KD QLG
Sbjct: 271 HGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 330
Query: 179 G-LPVVQPCPVE 189
G L + P PV+
Sbjct: 331 GTLDQLIPLPVK 342
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 90/150 (60%), Gaps = 2/150 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N + +LG G + P+++ +L V + QI+ G
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 198
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ G V+SWG GQLG T+++ P +IEAL ++ V +ACGGS SA +T
Sbjct: 199 EAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLT 258
Query: 160 EKGKLYMWGNAKDSQLGVPGLP-VVQPCPV 188
+ G L+ +G K QLG ++PC V
Sbjct: 259 QDGLLFTFGAGKHGQLGHNSTQNELRPCLV 288
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 84/144 (58%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG++E G+LGLG + PS ++AL V ++CGG + +LT++G L
Sbjct: 211 VYSWGKNEF-GQLGLGHTESKDS------PSLIEALDNQKVEFLACGGSHSALLTQDGLL 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA + +LG +P L+ LV R+ QIA G +H+LA D GKVFS+G G
Sbjct: 264 FTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGK 323
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T +Q +P+ ++ + E
Sbjct: 324 DGQLGNGGTLDQLIPLPVKVSSSE 347
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 16/156 (10%)
Query: 25 AGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+GG P +K + + +V G ++L+ +G+ + + + + R + +
Sbjct: 82 SGGARTPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYSMKH--LRSESI------ 133
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALA 141
L + +IIQI G YHSLAL+ G++F+WG HGQL G F + P ++E LA
Sbjct: 134 ----LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFP-STTTPQIVEHLA 188
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ I+ G + S A++ G +Y WG + QLG+
Sbjct: 189 GVPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGL 224
>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
Length = 4725
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 104/192 (54%), Gaps = 13/192 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
ELYTWGR G G LG G +EA IP V L + V V+CG T+ +TE
Sbjct: 572 ELYTWGR----GNYGRLGHGSSEDEA----IPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
GQ+W+WG +LGRG G PKL+ L D+ +I++ G S+ALT DG+V+SWG
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 684 KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-H 742
Query: 177 VPGLPVVQPCPV 188
L V +P P
Sbjct: 743 FDTLRVTKPEPT 754
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3023 GRLGLGLS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3187
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 96/181 (53%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E+Y+WG +G GRLG G P P S K V ++CG ++ +T E
Sbjct: 516 EVYSWGCGDG-GRLGHGDTLPLEEPKVISAFSGKQGGKH----VVHIACGSTYSAAITAE 570
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSW 115
G+L+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SW
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G +G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +L
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRL 690
Query: 176 G 176
G
Sbjct: 691 G 691
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 10/170 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG + +G+LG ++ P ++AL + ++CG + LT G+
Sbjct: 3068 KVFSWGEGD-DGKLGHFSRMNCDK------PRLIEALKTKRIRDIACGSSHSAALTSSGE 3120
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD KPK++ L+ R+IQ+A G +LALTD+G VFSWG
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3180
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
G G+LG ++ +P IE L + V I CG S A+T+ G ++ W
Sbjct: 3181 GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 3920 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 3979
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++E L V I
Sbjct: 3980 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDI 4039
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4040 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4069
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2961 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3014 VYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3133
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4057 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4109
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4110 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4169
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4170 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4206
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+ L V ++CG T+ LT++
Sbjct: 4002 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDD 4054
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4055 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4114
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4115 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4173
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 739 QCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFA 776
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA----DEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A + + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 83/144 (57%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR----II 94
V +AA S G + + L G++++WG LG GD + +PK++ + ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R IQ+ G A+T DGK+++ GY
Sbjct: 3843 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADGKLYATGY 3902
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3903 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 3962
Query: 176 G 176
G
Sbjct: 3963 G 3963
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2944 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3003 KSLFAVTVEGKVYACGEATNGRLGL 3027
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 517 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 571
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ +I++ G S+ALT DG+V+SWG G
Sbjct: 572 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGD 631
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 632 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 690
Query: 180 LPVVQPCPV 188
L V +P P
Sbjct: 691 LRVTKPEPT 699
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3118 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3170
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3171 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3230
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3231 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3269
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
++Y+ G + GRLGLG +G + IP ++ AL V AV GG LT +
Sbjct: 2956 KVYSCG-EATNGRLGLG-----MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3009
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG + +LG R+ KP+L+ L RI IA G HS ALT G++++WG
Sbjct: 3010 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3069
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQL 175
G +G+LGH Q P +++ L V +ACG + + A+T++G ++ WG+ +L
Sbjct: 3070 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3129
Query: 176 G 176
G
Sbjct: 3130 G 3130
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 461 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 518
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 519 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 578
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 579 DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 636
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 3979 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4038
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V IACG
Sbjct: 4039 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSG 4098
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4099 DAQTLCLTDDDTVWSWGDGDYGKLG 4123
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2904 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2956
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
+++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 2957 VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3016
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3017 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3076
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3063 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3115
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3116 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3175
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3176 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3234
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 571 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ 623
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 624 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 683
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 684 QCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 734
Query: 180 LPVVQPCPV 188
VV CPV
Sbjct: 735 PFVVDICPV 743
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4056 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4108
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4109 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4168
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4169 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4227
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4111 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4163
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4164 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4223
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4224 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4260
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V V+C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 399 VMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQLVQGLASRNIVKIAAHS 448
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 449 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 508
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 509 SAAITAEGELYTWGRGNYGRLG 530
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 442 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 500
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 501 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 560
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 561 AQTLAVTENGQVWSWGDGDYGKLG 584
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3956
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3957 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4016
Query: 176 G 176
G
Sbjct: 4017 G 4017
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2887 LIRKKTPGLESTA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2945
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 2946 KSLFAVTVEGKVYSCGEATNGRLGL 2970
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 7/159 (4%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S+P +V+ L + V ++ G F + L E+G LW WG N +LG GD +
Sbjct: 181 PGDITQISVPVRVQGLDM-VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ 239
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK----VPMVI 137
P + L + ++ IA GG+HS ALTD+G+V+ WG G HG+LG F N K VP +
Sbjct: 240 PIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLG--FGDNDKSSKMVPQKV 297
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ L+ E + I+CGG+ S AVT G+++ +G +LG
Sbjct: 298 QLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLG 336
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 24/174 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
L+ WG +E G+LG G + S P V+ L + + ++ GG+ + LT+ G++
Sbjct: 218 LWAWGNNE-YGQLGTG------DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEV 270
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYHSLALTDDGKVFSWG 116
+ WG + LG GD K++P V + I+QI+ GG HS+A+T DG++FS+G
Sbjct: 271 YGWGRGEHGRLGFGDNDK--SSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFG 328
Query: 117 YGGHGQLGH----SFTQNQKVPMVIEALADE------FVTHIACGGSTSAAVTE 160
G HG+LG+ + Q ++VP+ I +ACGG + A+ +
Sbjct: 329 RGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLALVQ 382
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 27/194 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
+ WG E +G+LGLG NE +KAL V +V G ++ +TE+G+L
Sbjct: 7 IIAWGSGE-DGQLGLGN----NEE--REWVCAIKALESQNVCSVVAGSRNSLAITEDGKL 59
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPN----LVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG N LG G K + +P+ L +V+I+Q A GG+H LA+ D G+ ++WG
Sbjct: 60 FTWGWNQRGTLGH---PAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 117 YGGHGQLGHSFTQN--------QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+GQ G + + + + V +A GG+ S +T +G ++ WG
Sbjct: 117 GNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 176
Query: 169 N----AKDSQLGVP 178
+Q+ VP
Sbjct: 177 QPWPPGDITQISVP 190
>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 969
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGR GRLG G +EA + + + +K L V A G T+ +TE GQ+
Sbjct: 768 ELYTWGRG-NYGRLGHGSSE--DEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQV 823
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G +
Sbjct: 824 WSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDN 883
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q L
Sbjct: 884 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTL 942
Query: 181 PVVQPCP 187
V +P P
Sbjct: 943 RVTKPEP 949
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 712 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 769
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 770 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 829
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 830 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 887
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L II+IA +
Sbjct: 650 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIIKIAAHS 699
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 700 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 759
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 760 SAAITAEGELYTWGRGNYGRLG 781
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
+ +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 693 IKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 751
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 752 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 811
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 812 AQTLAVTENGQVWSWGDGDYGKLG 835
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 822 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 874
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 875 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 934
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
Q + + P + L + + IACG
Sbjct: 935 QCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 966
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 103/180 (57%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG G+LGLG G + L+ P ++ P V V+CG T+ LT G+
Sbjct: 6 ELYCWG-STSHGQLGLG---GIEDEQILT-PRQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+N +LG + +P+L+P L D IIQI+ G HSLAL+D G+V SWG
Sbjct: 61 VYACGSNDYSQLGHD--LPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118
Query: 120 HGQLGHSFTQNQ--KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH+ T+ + ++P V+ L + V IACG + S A+T G+LY WG+ QLGV
Sbjct: 119 CGQLGHA-TEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 100/179 (55%), Gaps = 6/179 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + G+LG+ PN+ + P ++ L +P+AA++CGG + ++++ G
Sbjct: 163 ELYSWGSN-IYGQLGVN---SPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGA 218
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + + +A G S+ LT++G VF+ G G
Sbjct: 219 VFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 278
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH F+ N+ +P ++ L +T +ACG T A V +GK+Y +G QLG
Sbjct: 279 YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGT 337
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LGL N+ + P+++K L + V V+CG F++ LT EG +
Sbjct: 219 VFGWGRNNC-GQLGL------NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+++ L+ I Q+A G H+LAL GKV+++G G
Sbjct: 272 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGS 331
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG T++ +P V+
Sbjct: 332 SGQLGTRSTKSLMLPQVV 349
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 7/159 (4%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S+P +V+ L + V ++ G F + L E+G LW WG N +LG GD +
Sbjct: 181 PGDITQISVPVRVQGLDM-VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ 239
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK----VPMVI 137
P + L + ++ IA GG+HS ALTD+G+V+ WG G HG+LG F N K VP +
Sbjct: 240 PIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLG--FGDNDKSSKMVPQKV 297
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ L+ E + I+CGG+ S AVT G+++ +G +LG
Sbjct: 298 QLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLG 336
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 24/174 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
L+ WG +E G+LG G + S P V+ L + + ++ GG+ + LT+ G++
Sbjct: 218 LWAWGNNE-YGQLGTG------DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEV 270
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYHSLALTDDGKVFSWG 116
+ WG + LG GD K++P V + I+QI+ GG HS+A+T DG++FS+G
Sbjct: 271 YGWGRGEHGRLGFGDNDK--SSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFG 328
Query: 117 YGGHGQLGH----SFTQNQKVPMVIEALADE------FVTHIACGGSTSAAVTE 160
G HG+LG+ + Q ++VP+ I +ACGG + A+ +
Sbjct: 329 RGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLALVQ 382
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 27/194 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
+ WG E +G+LGLG NE +KAL V +V G ++ +TE+G+L
Sbjct: 7 IIAWGSGE-DGQLGLGN----NEE--REWVCAIKALESQNVCSVVAGSRNSLAITEDGKL 59
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPN----LVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG N LG G K + +P+ L +V+I+Q A GG+H LA+ D G+ ++WG
Sbjct: 60 FTWGWNQRGTLGH---PAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 117 YGGHGQLGHSFTQ--------NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+GQ G + + + + V +A GG+ S +T +G ++ WG
Sbjct: 117 GNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 176
Query: 169 N----AKDSQLGVP 178
+Q+ VP
Sbjct: 177 QPWPPGDITQISVP 190
>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
gi|194702086|gb|ACF85127.1| unknown [Zea mays]
gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
Length = 389
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 3/169 (1%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S P +V+ L V ++ G F + LTE+ LW WG N +LG GD +
Sbjct: 184 PGDIKQISTPVRVQGLE-KVRVIAVGAFHNLALTEDVILWAWGNNEYGQLGTGDTQPRSQ 242
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ-NQKVPMVIEAL 140
P + L D+ ++ IA GG+HS ALT DG+V++WG G HG+LG + + VP+ +E L
Sbjct: 243 PIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVELL 302
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
A E + ++CGG+ S A+ G+++ +G +LG G V P+E
Sbjct: 303 AGEDIVQVSCGGTHSVALARDGRMFSYGRGDHGRLGY-GRKVTTGHPME 350
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+ WG E +G+LG+G G E P V+AL P V AV G ++ + ++G+L
Sbjct: 10 VLAWGSGE-DGQLGMG---GNEEK---DWPHFVEALGPYAVTAVVAGSRNSLAICDDGRL 62
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYHSLALTDDGKVFSWG 116
+ WG N LG K + P VD +I+Q A GG+H LA+ D G+ ++WG
Sbjct: 63 FTWGWNQRGTLGHPPET---KTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAYAWG 119
Query: 117 YGGHGQLGHSFTQNQ--------KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+GQ G + + +P+ V +A GG+ S +T++G ++ WG
Sbjct: 120 GNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQEGHVWTWG 179
Query: 169 N 169
Sbjct: 180 Q 180
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYHSLALTDDGKVFSWGYG 118
WG+ + +LG +GG + K P+ V+ + + G +SLA+ DDG++F+WG+
Sbjct: 13 WGSGEDGQLG----MGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAICDDGRLFTWGWN 68
Query: 119 GHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G LGH T+ + P ++ALA + A GG AV +KG+ Y WG + Q G
Sbjct: 69 QRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCG 127
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V +WG G GQLG + + P +EAL VT + G S A+ + G+L+ WG +
Sbjct: 10 VLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAICDDGRLFTWGWNQ 69
Query: 172 DSQLGVP 178
LG P
Sbjct: 70 RGTLGHP 76
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G +IP V L + V VSCG T+ +TE
Sbjct: 572 ELYTWGRG-NYGRLGHGSSEDQ------TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ I+++ G S+ALT DG+V++WG
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGK 684
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 685 GDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF 743
Query: 178 PGLPVVQPCP 187
L + +P P
Sbjct: 744 DTLRITKPEP 753
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG M LT +G++++WG +
Sbjct: 3026 GRLGLGIS-----SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 3080
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS A+T G++++WG G +G+LGH
Sbjct: 3081 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3190
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3178 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3230
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3231 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3290
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3291 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E+++WG +G GRLG G P P LS K V ++CG ++ +T E
Sbjct: 516 EVFSWGCGDG-GRLGHGDTVPLEEPKLISALSGKQAGKH----VVHIACGSTYSAAITAE 570
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSW 115
G+L+ WG + LG G P L+ L +++I ++ +G +LA+T++G+V+SW
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSW 630
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G +G+LG + K P +IE L D + + CG S A+T+ G++Y WG + +L
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRL 690
Query: 176 G 176
G
Sbjct: 691 G 691
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2964 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3016
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L + V+ + + +GG H++ALT DGK+FSWG
Sbjct: 3017 VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWG 3076
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3077 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG 3136
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4039 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4098
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ IA GG HS +T G +F+WG G +G+LGH +++Q P ++EAL V IACG
Sbjct: 4099 VDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSG 4158
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4159 DAQTLCLTDDDTVWSWGDGDYGKLG 4183
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+L+TWG+ GR G LG G ++ P V+AL V ++CG T+ LT+
Sbjct: 4116 DLFTWGK----GRYGRLGHGDSEDQLK----PKLVEALQGYRVIDIACGSGDAQTLCLTD 4167
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L D+ ++++ G S+ALT G V++WG
Sbjct: 4168 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWG 4227
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4228 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4287
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3123 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3235
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3236 GDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 81/142 (57%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS D +G P+L+ +L I++IA +
Sbjct: 454 VVQIACAEKRFLILSRNGRVYTQAYNS-------DTLG---PQLVQSLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL+ +G+VFSWG G G+LGH T + P +I AL A + V HIACG +
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + + V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 739 QCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 789
Query: 180 LPVVQPCPV 188
VV CP+
Sbjct: 790 PFVVDVCPM 798
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4171 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAV 4223
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4283
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + + +ACG + + A
Sbjct: 4284 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4320
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L+ G++++WG LG GD V +PKL+ L ++
Sbjct: 497 VKIAAHSDGHHY-LALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH +++Q +PM++ L V ++CG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4076
Query: 176 G 176
G
Sbjct: 4077 G 4077
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
A T KVF WG QLG KVP E L+ V +A G + AVT +GK+
Sbjct: 2958 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3017
Query: 165 YMWGNAKDSQLGV 177
Y G A + +LG+
Sbjct: 3018 YACGEATNGRLGL 3030
>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 108/192 (56%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + P V+ L VP+A +S G +M L+ G
Sbjct: 157 ELFAWGQN-LHGQLGVG-----RTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + ++ +A GG HS LT DG +F++G G
Sbjct: 211 IYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGK 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ KD QLG
Sbjct: 271 HGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNG 330
Query: 179 G-LPVVQPCPVE 189
G L + P PV+
Sbjct: 331 GTLDQLIPLPVK 342
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N + +LG G P+++ +L V + QI+ G
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAG 198
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ G ++SWG GQLG T+++ P +IEAL ++ V +ACGGS SA +T
Sbjct: 199 EAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLT 258
Query: 160 EKGKLYMWGNAKDSQLGVPGLP-VVQPCPV 188
+ G L+ +G K QLG ++PC V
Sbjct: 259 QDGLLFTFGAGKHGQLGHNSTQNELRPCLV 288
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 86/144 (59%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG++E G+LGLG + PS ++AL V ++CGG + +LT++G L
Sbjct: 211 IYSWGKNEF-GQLGLGHTESKDS------PSLIEALDNQKVEFLACGGSHSALLTQDGLL 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA-LTDDGKVFSWGYGG 119
+ +GA + +LG +P L+ LV R+ QIA G +H+LA ++D GKVFS+G G
Sbjct: 264 FTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGK 323
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T +Q +P+ ++ + E
Sbjct: 324 DGQLGNGGTLDQLIPLPVKVSSSE 347
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 14/155 (9%)
Query: 25 AGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+GG P +K + + +V G ++L+ +G+ + + + + R + +
Sbjct: 82 SGGARTPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYSMKH--LRSESI------ 133
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALAD 142
L + +IIQI G YHSLAL+ G++F+WG HGQLG T + P ++E LA
Sbjct: 134 ----LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAG 189
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ I+ G + S A++ G +Y WG + QLG+
Sbjct: 190 VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGL 224
>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 108/192 (56%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + P V+ L VP+A +S G +M L+ G
Sbjct: 157 ELFAWGQN-LHGQLGVG-----RTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + ++ +A GG HS LT DG +F++G G
Sbjct: 211 IYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGK 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ KD QLG
Sbjct: 271 HGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNG 330
Query: 179 G-LPVVQPCPVE 189
G L + P PV+
Sbjct: 331 GTLDQLIPLPVK 342
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N + +LG G P+++ +L V + QI+ G
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAG 198
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ G ++SWG GQLG T+++ P +IEAL ++ V +ACGGS SA +T
Sbjct: 199 EAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLT 258
Query: 160 EKGKLYMWGNAKDSQLGVPGLP-VVQPCPV 188
+ G L+ +G K QLG ++PC V
Sbjct: 259 QDGLLFTFGAGKHGQLGHNSTQNELRPCLV 288
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 86/144 (59%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG++E G+LGLG + PS ++AL V ++CGG + +LT++G L
Sbjct: 211 IYSWGKNEF-GQLGLGHTESKDS------PSLIEALDNQKVEFLACGGSHSALLTQDGLL 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA-LTDDGKVFSWGYGG 119
+ +GA + +LG +P L+ LV R+ QIA G +H+LA ++D GKVFS+G G
Sbjct: 264 FTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGK 323
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T +Q +P+ ++ + E
Sbjct: 324 DGQLGNGGTLDQLIPLPVKVSSSE 347
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 14/155 (9%)
Query: 25 AGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+GG P +K + + +V G ++L+ +G+ + + + + R + +
Sbjct: 82 SGGARTPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYSMKH--LRSESI------ 133
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALAD 142
L + +IIQI G YHSLAL+ G++F+WG HGQLG T + P ++E LA
Sbjct: 134 ----LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAG 189
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ I+ G + S A++ G +Y WG + QLG+
Sbjct: 190 VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGL 224
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G +IP V L + V VSCG T+ +TE
Sbjct: 548 ELYTWGRG-NYGRLGHGSSEDQ------TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 600
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ I+++ G S+ALT DG+V++WG
Sbjct: 601 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGK 660
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 661 GDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF 719
Query: 178 PGLPVVQPCP 187
L + +P P
Sbjct: 720 DTLRITKPEP 729
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG M LT +G++++WG +
Sbjct: 3002 GRLGLGIS-----SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 3056
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS A+T G++++WG G +G+LGH
Sbjct: 3057 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3116
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3117 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3166
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3154 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3206
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3207 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3266
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P +++ L + +T +ACG S S A
Sbjct: 3267 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3303
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E+++WG +G GRLG G P P LS K V ++CG ++ +T E
Sbjct: 492 EVFSWGCGDG-GRLGHGDTVPLEEPKLISALSGKQAGKH----VVHIACGSTYSAAITAE 546
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSW 115
G+L+ WG + LG G P L+ L +++I ++ +G +LA+T++G+V+SW
Sbjct: 547 GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSW 606
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G +G+LG + K P +IE L D + + CG S A+T+ G++Y WG + +L
Sbjct: 607 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRL 666
Query: 176 G 176
G
Sbjct: 667 G 667
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2940 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2992
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L + V+ + + +GG H++ALT DGK+FSWG
Sbjct: 2993 VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWG 3052
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3053 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG 3112
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4015 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4074
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ IA GG HS +T G +F+WG G +G+LGH +++Q P ++EAL V IACG
Sbjct: 4075 VDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSG 4134
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4135 DAQTLCLTDDDTVWSWGDGDYGKLG 4159
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3099 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3151
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3152 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3211
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3212 GDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3270
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+L+TWG+ GR G LG G ++ P V+AL V ++CG T+ LT+
Sbjct: 4092 DLFTWGK----GRYGRLGHGDSEDQLK----PKLVEALQGYRVIDIACGSGDAQTLCLTD 4143
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4144 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4203
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4204 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4263
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 81/142 (57%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS D +G P+L+ +L I++IA +
Sbjct: 430 VVQIACAEKRFLILSRNGRVYTQAYNS-------DTLG---PQLVQSLASRNIVKIAAHS 479
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL+ +G+VFSWG G G+LGH T + P +I AL A + V HIACG +
Sbjct: 480 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTY 539
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 540 SAAITAEGELYTWGRGNYGRLG 561
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + + V CG F++ LT++GQ
Sbjct: 602 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQ 654
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 655 VYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 714
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 715 QCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 765
Query: 180 LPVVQPCPV 188
VV CP+
Sbjct: 766 PFVVDVCPM 774
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4147 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4199
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4200 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4259
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + + +ACG + + A
Sbjct: 4260 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4296
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L+ G++++WG LG GD V +PKL+ L ++
Sbjct: 473 VKIAAHSDGHHY-LALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVV 531
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH +++Q +PM++ L V ++CG
Sbjct: 532 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGD 591
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 592 AQTLAVTENGQVWSWGDGDYGKLG 615
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3933 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3992
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3993 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4052
Query: 176 G 176
G
Sbjct: 4053 G 4053
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
A T KVF WG QLG KVP E L+ V +A G + AVT +GK+
Sbjct: 2934 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2993
Query: 165 YMWGNAKDSQLGV 177
Y G A + +LG+
Sbjct: 2994 YACGEATNGRLGL 3006
>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
Length = 1052
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 11/179 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
LY WG D G+LGLG E + +PS+++ P PV ++CG T+ LT GQ+
Sbjct: 3 LYCWG-DASHGQLGLGGI----ENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQV 57
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ G N +++LG + +P +P L +IQIA G HS+ALT+ G++ SWG
Sbjct: 58 YACGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDC 115
Query: 121 GQLGHSFTQNQ--KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+GHS T N ++P ++ L V IACG + S A+T G+LY WG+ QLGV
Sbjct: 116 GQVGHS-TDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 173
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 96/178 (53%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + G+LG+ P P+ L + + L +P+A ++CGG + ++++
Sbjct: 159 ELYSWGSN-IYGQLGVQSPKDLPHSNAPLRLTT---ILGIPLATIACGGNHSFLISKSSA 214
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L ++ + + + G +S+ LT++G VF+ G G
Sbjct: 215 VFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGN 274
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH + N+ +P ++ L +T +ACG T A V G++Y +G QLG
Sbjct: 275 YGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLG 332
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 19 GRGPNEAGGLSIPSKVKALPVP------VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
G + G +P+K + LP+P V ++CG +M LTE GQ+ +WG N ++G
Sbjct: 61 GNNDHHQLGHELPTK-RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVG 119
Query: 73 RG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN- 130
D PK+L LV ++QIA G HSLALT G+++SWG +GQLG ++
Sbjct: 120 HSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL 179
Query: 131 --QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
P+ + + + IACGG+ S +++ ++ WG QLG+
Sbjct: 180 PHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGL 228
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL N+ + PS++K++ + V V+CG +++ LT EG +
Sbjct: 215 VFGWGKNTC-GQLGL------NDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGV 267
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG-KVFSWGYGG 119
+ GA + +LG G P+++ L+ I Q+A G H+LAL G +V+S+G G
Sbjct: 268 FTCGAGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGA 327
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG T +Q +P V+
Sbjct: 328 SGQLGTRNTISQTLPKVV 345
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 5/188 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGR GRLG G +EA + + + +K L V A G T+ +TE GQ+
Sbjct: 832 ELYTWGRG-NYGRLGHGSSE--DEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQV 887
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G +
Sbjct: 888 WSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDN 947
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q L
Sbjct: 948 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTL 1006
Query: 181 PVVQPCPV 188
V +P P
Sbjct: 1007 RVTKPEPT 1014
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP +V AL V AV GG LT +G++++WG +
Sbjct: 3283 GRLGLGLS-----SGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3337
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3338 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3397
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3398 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3447
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3435 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3487
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3488 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3547
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P ++ L + +T +ACG S S A T
Sbjct: 3548 GQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVAWT 3586
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 776 EVYSWGCGDG-GRLGHGDTVPLEEPKVISTFSGKQA-GKHVVHIACGSTYSAAITAEGEL 833
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 834 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 893
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 894 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 951
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4293 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4352
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V IACG
Sbjct: 4353 ADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSG 4412
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4413 DAQTLCLTDDDTVWSWGDGDYGKLG 4437
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 3221 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3273
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3274 VYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3333
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3334 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3393
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3380 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3432
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3433 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3492
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3493 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3551
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4370 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4422
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4423 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4482
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4483 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4541
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4425 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4477
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4478 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4537
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4538 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4574
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 886 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 938
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 939 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 998
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 999 QCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFA 1036
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 757 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVV 815
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 816 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 875
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 876 AQTLAVTENGQVWSWGDGDYGKLG 899
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 714 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 763
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A + V HIACG +
Sbjct: 764 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTY 823
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 824 SAAITAEGELYTWGRGNYGRLG 845
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 4211 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4270
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4271 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4330
Query: 176 G 176
G
Sbjct: 4331 G 4331
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
A T KVF WG QLG KVP E L+ V +A G + AVT +GK+
Sbjct: 3215 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3274
Query: 165 YMWGNAKDSQLGV 177
Y G A + +LG+
Sbjct: 3275 YACGEATNGRLGL 3287
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 20/196 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WGR E +G+LGLG + P + AL + ++CG T+VLT+EG++
Sbjct: 3 VYSWGRGE-DGQLGLGDTSDQHR------PVPIDALAERRIVQIACGSGHTVVLTDEGEV 55
Query: 61 WNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG + LG GD GWK P+L+ L I Q+ G YH+ A+T G +++WG G
Sbjct: 56 YTWGRGDDGRLGHGD--NGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGG 113
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+G+LGH P ++E L V +ACG + + E +Y WG D + GV
Sbjct: 114 MYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWG---DKENGVS 170
Query: 179 GLPVVQ-----PCPVE 189
G + PCPVE
Sbjct: 171 GHGDTEGHQYLPCPVE 186
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 7/177 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++YTWG D+ G G G G +P V+ L + +S GF T L+E G+
Sbjct: 158 DVYTWG-DKENGVSGHGDTEGHQ-----YLPCPVEELRGKNIVQISACGFHTAALSEFGE 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ +G LG + + L R+ Q+A GG+H+ A+T+ G+V++WG G
Sbjct: 212 VFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGE 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
HGQLGH N+ VP +E+L ++ V I CG S + A+T+ G++Y WGN +LG
Sbjct: 272 HGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLG 328
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 106/224 (47%), Gaps = 49/224 (21%)
Query: 1 ELYTWGRDEGEGRLGLGPG------------RGPN------------------------- 23
E+YTWGR + +GRLG G RG N
Sbjct: 54 EVYTWGRGD-DGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGG 112
Query: 24 ---------EAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR 73
G S P V+ L + V V+CG T+VL E ++ WG N G
Sbjct: 113 GMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGH 172
Query: 74 GDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
GD G + P + L I+QI+ G+H+ AL++ G+VF++G G G+LGH+ +NQ
Sbjct: 173 GDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQP 232
Query: 133 VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V +EALA + V +ACGG +AAVTE G++Y WG + QLG
Sbjct: 233 VARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLG 276
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 92/162 (56%), Gaps = 10/162 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
E++T+G EG+ GRLG R + V+AL V V+CGGF T +TE G
Sbjct: 211 EVFTFG--EGKFGRLGHNSERNQ------PVARFVEALAGKRVKQVACGGFHTAAVTETG 262
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG + +LG GD+V P + +LV+ ++QI G H++ALTD G+V++WG G
Sbjct: 263 EVYTWGGGEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNG 322
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
HG+LGH+ T +P +++ L + V +A + A+ +
Sbjct: 323 DHGKLGHNDTTKVTLPKLVDVLEGKRVISVASYNEHTVALVD 364
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 100/179 (55%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG G+LGLG G + L+ PS++ P V V+CG T+ LT G+
Sbjct: 6 ELYCWG-STSHGQLGLG---GIEDEQILT-PSQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+N +LG + +P L+P L D IIQI G HSLAL+D G+V SWG
Sbjct: 61 VYACGSNDYSQLGHD--LPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDND 118
Query: 120 HGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH+ + ++P V+ L + V IACG + S A+T G+LY WG+ QLGV
Sbjct: 119 CGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 100/179 (55%), Gaps = 6/179 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + G+LG+ PN+ + P ++ L +P+AA++CGG + ++++ G
Sbjct: 163 ELYSWGSN-IYGQLGVN---SPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGA 218
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + + +A G S+ LT++G VF+ G G
Sbjct: 219 VFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 278
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH F+ N+ +P ++ L +T +ACG T A V +G++Y +G QLG
Sbjct: 279 YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGT 337
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LGL N+ S P+++K L + V V+CG F++ LT EG +
Sbjct: 219 VFGWGRNNC-GQLGL------NDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+++ L+ I Q+A G H+LAL G+V+++G G
Sbjct: 272 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGS 331
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG T++ +P V+
Sbjct: 332 SGQLGTRSTKSLMLPQVV 349
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G +IP V L + V VSCG T+ +TE
Sbjct: 572 ELYTWGRG-NYGRLGHGSSEDQ------TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ I+++ G S+ALT DG+V++WG
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGK 684
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 685 GDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF 743
Query: 178 PGLPVVQPCP 187
L + +P P
Sbjct: 744 DTLRITKPEP 753
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG M LT +G++++WG +
Sbjct: 3026 GRLGLGIS-----SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3080
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS A+T G++++WG G +G+LGH
Sbjct: 3081 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3190
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3178 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3230
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3231 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3290
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3291 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E+++WG +G GRLG G P P LS K V ++CG ++ +T E
Sbjct: 516 EVFSWGCGDG-GRLGHGDTVPLEEPKMISALSGKQAGKH----VVHIACGSTYSAAITAE 570
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSW 115
G+L+ WG + LG G P L+ L +++I ++ +G +LA+T++G+V+SW
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSW 630
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G +G+LG + K P +IE L D + + CG S A+T+ G++Y WG + +L
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRL 690
Query: 176 G 176
G
Sbjct: 691 G 691
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2964 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3016
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L + V+ + + +GG H++ALT DGKVFSWG
Sbjct: 3017 VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 3076
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3077 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG 3136
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4039 IQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4098
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ IA GG HS +T G +F+WG G +G+LGH +++Q P ++EAL V IACG
Sbjct: 4099 VDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSG 4158
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4159 DAQTLCLTDDDTVWSWGDGDYGKLG 4183
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3123 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3235
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3236 GDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+L+TWG+ GR G LG G ++ P V+AL V ++CG T+ LT+
Sbjct: 4116 DLFTWGK----GRYGRLGHGDSEDQLK----PKLVEALQGYRVIDIACGSGDAQTLCLTD 4167
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4168 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4227
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4228 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4287
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V V+C ++L+ G+++ NS D +G P+L+ +L I++IA +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS-------DTLG---PQLVQSLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL+ +G+VFSWG G G+LGH T + P +I AL A + V HIACG +
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + + V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 739 QCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 789
Query: 180 LPVVQPCPV 188
VV CP+
Sbjct: 790 PFVVDVCPM 798
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4171 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4223
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4283
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + + +ACG + + A
Sbjct: 4284 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4320
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L+ G++++WG LG GD V +PK++ L ++
Sbjct: 497 VKIAAHSDGHHY-LALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH +++Q +PM++ L V ++CG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKL 4076
Query: 176 G 176
G
Sbjct: 4077 G 4077
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
A T KVF WG QLG KVP E L+ V +A G + AVT +GK+
Sbjct: 2958 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3017
Query: 165 YMWGNAKDSQLGV 177
Y G A + +LG+
Sbjct: 3018 YACGEATNGRLGL 3030
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 100/179 (55%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG G+LGLG G + L+ PS++ P V V+CG T+ LT G+
Sbjct: 6 ELYCWG-STSHGQLGLG---GIEDEQILT-PSQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+N +LG + +P L+P L D IIQI G HSLAL+D G+V SWG
Sbjct: 61 VYACGSNDYSQLGHD--LPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDND 118
Query: 120 HGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH+ + ++P V+ L + V IACG + S A+T G+LY WG+ QLGV
Sbjct: 119 CGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 100/179 (55%), Gaps = 6/179 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + G+LG+ PN+ + P ++ L +P+AA++CGG + ++++ G
Sbjct: 163 ELYSWGSN-IYGQLGVN---SPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGA 218
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + + +A G S+ LT++G VF+ G G
Sbjct: 219 VFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 278
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH F+ N+ +P ++ L +T +ACG T A V +G++Y +G QLG
Sbjct: 279 YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGT 337
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LGL N+ S P+++K L + V V+CG F++ LT EG +
Sbjct: 219 VFGWGRNNC-GQLGL------NDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+++ L+ I Q+A G H+LAL G+V+++G G
Sbjct: 272 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGS 331
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG T++ +P V+
Sbjct: 332 SGQLGTRSTKSLMLPQVV 349
>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 11/179 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
LY WG D G+LGLG E + +PS+++ P PV ++CG T+ LT GQ+
Sbjct: 3 LYCWG-DASHGQLGLGGI----ENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQV 57
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ G N +++LG + +P +P L +IQIA G HS+ALT+ G++ SWG
Sbjct: 58 YACGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDC 115
Query: 121 GQLGHSFTQNQ--KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+GHS T N ++P ++ L V IACG + S A+T G+LY WG+ QLGV
Sbjct: 116 GQVGHS-TDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 173
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 96/178 (53%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + G+LG+ P P+ L + + L +P+A ++CGG + ++++
Sbjct: 159 ELYSWGSN-IYGQLGVQSPKDLPHSNAPLRLTT---ILGIPLATIACGGNHSFLISKSSA 214
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L ++ + + + G +S+ LT++G VF+ G G
Sbjct: 215 VFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGN 274
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH + N+ +P ++ L +T +ACG T A V G++Y +G QLG
Sbjct: 275 YGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLG 332
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 19 GRGPNEAGGLSIPSKVKALPVP------VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
G + G +P+K + LP+P V ++CG +M LTE GQ+ +WG N ++G
Sbjct: 61 GNNDHHQLGHELPTK-RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVG 119
Query: 73 RG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN- 130
D PK+L LV ++QIA G HSLALT G+++SWG +GQLG ++
Sbjct: 120 HSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL 179
Query: 131 --QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
P+ + + + IACGG+ S +++ ++ WG QLG+
Sbjct: 180 PHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGL 228
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL N+ + PS++K++ + V V+CG +++ LT EG +
Sbjct: 215 VFGWGKNTC-GQLGL------NDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGV 267
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG-KVFSWGYGG 119
+ GA + +LG G P+++ L+ I Q+A G H+LAL G +V+S+G G
Sbjct: 268 FTCGAGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGA 327
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG T +Q +P V+
Sbjct: 328 SGQLGTRNTISQTLPKVV 345
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 260 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 314
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 315 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 374
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 375 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 433
Query: 180 LPVVQPCP 187
L V +P P
Sbjct: 434 LRVTKPEP 441
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 204 EVYSWGCGDG-GRLGHGDTVPLEEPKAISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 261
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 262 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 321
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 322 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 379
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N +P ++ L V + CG F++ LT+ G +
Sbjct: 2812 VFSWG-DGDFGKLGRGGSEGCN------VPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2864
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 2865 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 2924
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 2925 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2963
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 2660 GRLGLGLS-----SGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2714
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 2715 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2774
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 2775 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 2824
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G R +P+++ +L
Sbjct: 3667 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESL 3726
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 3727 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 3786
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 3787 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3816
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2598 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2650
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 2651 VYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWG 2710
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 2711 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 2770
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 2757 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 2809
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 2810 GLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2869
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 2870 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2928
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 83/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P+K+ +L + V V CG F++ LT+ G +
Sbjct: 3804 VWSWG-DGDYGKLGRGG------SDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAV 3856
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 3857 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 3916
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 3917 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3953
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 3749 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 3801
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 3802 DTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 3861
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 3862 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 3920
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 314 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 366
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 367 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 426
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 427 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 477
Query: 180 LPVVQPCPV 188
VV C +
Sbjct: 478 PFVVDICSM 486
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK + ++
Sbjct: 185 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVV 243
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 244 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 303
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 304 AQTLAVTENGQVWSWGDGDYGKLG 327
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 142 VTQIACAEKRFLILSRSGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 191
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P I A A + V HIACG +
Sbjct: 192 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTY 251
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 252 SAAITAEGELYTWGRGNYGRLG 273
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3590 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3649
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3650 GAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 3709
Query: 176 G 176
G
Sbjct: 3710 G 3710
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2581 LIRKKAAGLESTA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2639
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 2640 KSLFAVTVEGKVYACGEATNGRLGL 2664
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis
domestica]
Length = 4706
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 102/191 (53%), Gaps = 11/191 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G +IP V L + V VSCG T+ +TE
Sbjct: 572 ELYTWGRG-NYGRLGHGSSEDQ------TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 684
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 685 GDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF 743
Query: 178 PGLPVVQPCPV 188
L + +P P
Sbjct: 744 DTLRITKPEPT 754
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG M LT +G++++WG +
Sbjct: 3023 GRLGLGIS-----SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3077
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS A+T G++++WG G +G+LGH
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3137
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3187
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3175 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3227
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3228 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3287
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P +++ L + +T +ACG S S A
Sbjct: 3288 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E+++WG +G GRLG G P P LS K V ++CG ++ +T E
Sbjct: 516 EVFSWGCGDG-GRLGHGDTVPLEEPKMISALSGKQAGKH----VVHIACGSTYSAAITAE 570
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSW 115
G+L+ WG + LG G P L+ L +++I ++ +G +LA+T++G+V+SW
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSW 630
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G +G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +L
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRL 690
Query: 176 G 176
G
Sbjct: 691 G 691
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2961 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L + V+ + + +GG H++ALT DGKVFSWG
Sbjct: 3014 VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 3073
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG 3133
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3120 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3233 GDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3291
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L +++ +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 739 QCQHFDTLRITKPEPTALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 789
Query: 180 LPVVQPCPV 188
VV CP+
Sbjct: 790 PFVVDVCPM 798
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4038 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4090
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4091 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4150
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + + +ACG + + A
Sbjct: 4151 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4187
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 90/162 (55%), Gaps = 12/162 (7%)
Query: 21 GPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW 80
GP GL+ + VK +AA S G + + L G++++WG LG GD V
Sbjct: 484 GPQLVQGLASRNIVK-----IAAHSDGHHY-LALAATGEVFSWGCGDGGRLGHGDTVPLE 537
Query: 81 KPKLLPNL----VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMV 136
+PK++ L ++ IA G +S A+T +G++++WG G +G+LGH +++Q +PM+
Sbjct: 538 EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML 597
Query: 137 IEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+ L V ++CG + + AVTE G+++ WG+ +LG
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG 639
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 78/142 (54%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
+ ++C ++L+ G+++ NS D +G P+L+ L I++IA +
Sbjct: 454 ITQIACAEKRFLILSRNGRVYMQAYNS-------DTLG---PQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+VFSWG G G+LGH T + P +I AL A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Query: 33 KVKALP-VPVAAVSCGG--FFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
KV+AL V ++CG T+ LT++ +W+WG +LGRG G P + +L
Sbjct: 4008 KVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT 4067
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
+ ++++ G S+ALT G V++WG G + +LGH + + P ++ L + V IA
Sbjct: 4068 GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4127
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G TE G++Y WG+ + QLG
Sbjct: 4128 TGSLHCVCCTEDGEVYTWGDNDEGQLG 4154
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ + G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2944 LIRKKSSGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3003 KSLFAVTVEGKVYACGEATNGRLGL 3027
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 572 ELYTWGR----GNYGRLGHGSSEDEAVPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 686
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 687 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 745
Query: 180 LPVVQPCP 187
L V +P P
Sbjct: 746 LRVTKPEP 753
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP +V AL V AV GG LT +G++++WG +
Sbjct: 3026 GRLGLGIS-----SGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3080
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3081 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3140
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3190
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3178 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3230
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3231 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3290
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3291 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4035 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4094
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V +
Sbjct: 4095 RGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDV 4154
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4155 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4184
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 4/153 (2%)
Query: 28 LSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLL 85
+ +PS + L + V V+ G +T EG+++ G +N LG G G P+ +
Sbjct: 2984 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQV 3043
Query: 86 PNLVD--VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
L V+ + + +GG H+ ALT DGKVFSWG G G+LGH N P +IEAL +
Sbjct: 3044 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTK 3103
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ IACG S SAA+T G+LY WG + +LG
Sbjct: 3104 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3136
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3123 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3235
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3236 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3294
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V V+CG T+ LT++
Sbjct: 4117 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4169
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4170 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4229
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4230 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4288
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4172 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4224
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4225 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4284
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4285 GQLGDGTTNAIQRPRLVPALQGKKVNRVACGSAHTLA 4321
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 739 QCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFA 776
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ VPM++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3958 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4017
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4018 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4077
Query: 176 G 176
G
Sbjct: 4078 G 4078
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 571 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 686 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 744
Query: 180 LPVVQPCP 187
L V +P P
Sbjct: 745 LRVTKPEP 752
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3174 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3226
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3287 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3022 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3186
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 515 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 572
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 632
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 633 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4093
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V IACG
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSG 4153
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4154 DAQTLCLTDDDTVWSWGDGDYGKLG 4178
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2960 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3132
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3119 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3231
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3232 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4111 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4223
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4224 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4166 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4218
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 625 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 738 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 788
Query: 180 LPVVQPCPV 188
VV C V
Sbjct: 789 PFVVDICSV 797
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 502
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG 584
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 496 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 554
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 555 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 614
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 615 AQTLAVTENGQVWSWGDGDYGKLG 638
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4071
Query: 176 G 176
G
Sbjct: 4072 G 4072
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2943 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3002 KSLFAVTVEGKVYACGEATNGRLGL 3026
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 571 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 686 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 744
Query: 180 LPVVQPCP 187
L V +P P
Sbjct: 745 LRVTKPEP 752
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3174 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3226
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3287 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3022 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3186
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 515 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 572
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 632
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 633 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4093
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V IACG
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSG 4153
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4154 DAQTLCLTDDDTVWSWGDGDYGKLG 4178
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2960 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3132
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3119 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3231
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3232 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4111 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4223
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4224 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4166 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4218
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 625 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 738 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 788
Query: 180 LPVVQPCPV 188
VV C V
Sbjct: 789 PFVVDICSV 797
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 502
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG 584
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 496 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 554
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 555 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 614
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 615 AQTLAVTENGQVWSWGDGDYGKLG 638
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4071
Query: 176 G 176
G
Sbjct: 4072 G 4072
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2943 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3002 KSLFAVTVEGKVYACGEATNGRLGL 3026
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 571 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 686 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 744
Query: 180 LPVVQPCP 187
L V +P P
Sbjct: 745 LRVTKPEP 752
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3174 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3226
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3287 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3022 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3186
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 515 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 572
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 632
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 633 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4093
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V IACG
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSG 4153
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4154 DAQTLCLTDDDTVWSWGDGDYGKLG 4178
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2960 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3132
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3119 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3231
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3232 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4111 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4223
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4224 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4166 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4218
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 625 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 738 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 788
Query: 180 LPVVQPCPV 188
VV C V
Sbjct: 789 PFVVDICSV 797
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 502
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG 584
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 496 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 554
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 555 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 614
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 615 AQTLAVTENGQVWSWGDGDYGKLG 638
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4071
Query: 176 G 176
G
Sbjct: 4072 G 4072
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2943 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3002 KSLFAVTVEGKVYACGEATNGRLGL 3026
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 571 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 686 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 744
Query: 180 LPVVQPCP 187
L V +P P
Sbjct: 745 LRVTKPEP 752
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3174 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3226
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3287 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3022 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3186
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 515 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 572
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 632
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 633 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4093
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V IACG
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSG 4153
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4154 DAQTLCLTDDDTVWSWGDGDYGKLG 4178
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2960 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3132
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3119 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3231
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3232 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4111 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4223
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4224 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4166 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4218
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 625 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 738 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 775
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 502
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG 584
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 496 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 554
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 555 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 614
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 615 AQTLAVTENGQVWSWGDGDYGKLG 638
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4071
Query: 176 G 176
G
Sbjct: 4072 G 4072
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2943 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3002 KSLFAVTVEGKVYACGEATNGRLGL 3026
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 571 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 686 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 744
Query: 180 LPVVQPCP 187
L V +P P
Sbjct: 745 LRVTKPEP 752
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3174 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3226
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3287 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3022 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3186
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 515 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 572
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 632
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 633 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4093
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V IACG
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSG 4153
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4154 DAQTLCLTDDDTVWSWGDGDYGKLG 4178
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2960 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3132
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3119 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3231
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3232 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4111 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4223
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4224 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4166 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4218
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 625 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 738 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 788
Query: 180 LPVVQPCPV 188
VV C V
Sbjct: 789 PFVVDICSV 797
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 502
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG 584
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 496 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 554
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 555 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 614
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 615 AQTLAVTENGQVWSWGDGDYGKLG 638
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4071
Query: 176 G 176
G
Sbjct: 4072 G 4072
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2943 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3002 KSLFAVTVEGKVYACGEATNGRLGL 3026
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 571 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 686 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 744
Query: 180 LPVVQPCP 187
L V +P P
Sbjct: 745 LRVTKPEP 752
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3174 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3226
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3287 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3022 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3186
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 515 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 572
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 632
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 633 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4093
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V IACG
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSG 4153
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4154 DAQTLCLTDDDTVWSWGDGDYGKLG 4178
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2960 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3132
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3119 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3231
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3232 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4111 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4223
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4224 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4166 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4218
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 625 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 738 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 788
Query: 180 LPVVQPCPV 188
VV C V
Sbjct: 789 PFVVDICSV 797
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 502
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG 584
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 496 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 554
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 555 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 614
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 615 AQTLAVTENGQVWSWGDGDYGKLG 638
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4071
Query: 176 G 176
G
Sbjct: 4072 G 4072
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2943 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3002 KSLFAVTVEGKVYACGEATNGRLGL 3026
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 17/189 (8%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTM 52
LYT DE G LGLG + E P ++ +L VA +S G G +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLTGKKVACLSYGSGPHVV 112
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
+ T EG+++ WG N+ +LG G G P + NL + R+I++A G YHSL LT DG+
Sbjct: 113 LATSEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V +IACG S AV + G++Y+WG +
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYS 232
Query: 171 KDSQLGVPG 179
+ QLG+ G
Sbjct: 233 GNGQLGLGG 241
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG +M + + G
Sbjct: 172 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG + N +LG G P + L +R+ + A G H+L LTD+G+V+ WG
Sbjct: 225 EVYVWGYSGNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P I D + AC + TSAA T+ G +YMWG + + +
Sbjct: 285 SYGQLGTGNKSNQPYPTPIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVVL 344
Query: 178 PGL 180
P L
Sbjct: 345 PHL 347
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 571 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 686 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 744
Query: 180 LPVVQPCP 187
L V +P P
Sbjct: 745 LRVTKPEP 752
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3174 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3226
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3287 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3022 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3186
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 515 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 572
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 632
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 633 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4029 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4088
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 4089 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 4148
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4149 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2960 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3132
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3119 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3231
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3232 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4111 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4223
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4224 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4166 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4218
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 625 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 738 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 775
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 502
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG 584
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 496 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 554
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 555 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 614
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 615 AQTLAVTENGQVWSWGDGDYGKLG 638
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4071
Query: 176 G 176
G
Sbjct: 4072 G 4072
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2943 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3002 KSLFAVTVEGKVYACGEATNGRLGL 3026
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 571 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 686 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 744
Query: 180 LPVVQPCP 187
L V +P P
Sbjct: 745 LRVTKPEP 752
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3174 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3226
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3287 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3022 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3186
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 515 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 572
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 632
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 633 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4093
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V IACG
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSG 4153
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4154 DAQTLCLTDDDTVWSWGDGDYGKLG 4178
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2960 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3132
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3119 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3231
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3232 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4111 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4223
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4224 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4166 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4218
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 625 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 738 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 775
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 502
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG 584
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 496 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 554
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 555 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 614
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 615 AQTLAVTENGQVWSWGDGDYGKLG 638
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4071
Query: 176 G 176
G
Sbjct: 4072 G 4072
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2943 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3002 KSLFAVTVEGKVYACGEATNGRLGL 3026
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 571 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 686 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 744
Query: 180 LPVVQPCP 187
L V +P P
Sbjct: 745 LRVTKPEP 752
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3167 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3219
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3220 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3279
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3280 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3318
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3015 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3069
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3070 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3129
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3130 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3179
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 515 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 572
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 632
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 633 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 3976 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4035
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V IACG
Sbjct: 4036 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSG 4095
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4096 DAQTLCLTDDDTVWSWGDGDYGKLG 4120
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2953 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3005
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3006 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3065
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3066 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3125
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3112 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3164
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3165 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3224
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3225 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3283
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4053 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4105
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4106 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4165
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4166 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4224
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4108 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4160
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4161 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4220
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4221 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4257
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 625 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 738 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 788
Query: 180 LPVVQPCPV 188
VV C V
Sbjct: 789 PFVVDICSV 797
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 502
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG 584
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 496 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 554
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 555 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 614
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 615 AQTLAVTENGQVWSWGDGDYGKLG 638
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2936 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2994
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 2995 KSLFAVTVEGKVYACGEATNGRLGL 3019
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G +EA IP V L + V V+CG T+ +TE
Sbjct: 571 ELYTWGRG-NYGRLGHGSSE--DEA----IPMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 684 GDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF 742
Query: 178 PGLPVVQPCP 187
L V +P P
Sbjct: 743 DTLRVTKPEP 752
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3174 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3226
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3287 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3022 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3186
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 515 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 572
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 632
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 633 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4065 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4124
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V IACG
Sbjct: 4125 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSG 4184
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4185 DAQTLCLTDDDTVWSWGDGDYGKLG 4209
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2960 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3132
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3119 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3231
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3232 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4142 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4194
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4195 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4254
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4255 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4313
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4197 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4249
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4250 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4309
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4310 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4346
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 625 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 738 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 775
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 502
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG 584
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 496 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 554
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 555 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 614
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 615 AQTLAVTENGQVWSWGDGDYGKLG 638
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3983 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4042
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4043 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4102
Query: 176 G 176
G
Sbjct: 4103 G 4103
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2943 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3002 KSLFAVTVEGKVYACGEATNGRLGL 3026
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGR GRLG G +EA + + + +K L V A G T+ +TE GQ+
Sbjct: 572 ELYTWGRG-NYGRLGHGSSE--DEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQV 627
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G +
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDN 687
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q L
Sbjct: 688 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTL 746
Query: 181 PVVQPCP 187
V +P P
Sbjct: 747 RVTKPEP 753
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3175 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3227
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3287
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3288 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3023 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3187
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4032 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4091
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V +
Sbjct: 4092 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDV 4151
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4152 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4181
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2961 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3014 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3133
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3120 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3233 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V V+CG T+ LT++
Sbjct: 4114 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4166
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4167 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4226
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4227 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4285
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4169 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4221
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4222 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4281
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4282 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 739 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 776
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L II+IA +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIIKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
+ +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 497 IKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4015 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4074
Query: 176 G 176
G
Sbjct: 4075 G 4075
Score = 42.7 bits (99), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2944 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3003 KSLFAVTVEGKVYACGEATNGRLGL 3027
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 549 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 603
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 604 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 663
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 664 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 722
Query: 180 LPVVQPCP 187
L V +P P
Sbjct: 723 LRVTKPEP 730
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3152 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3204
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3205 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3264
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3265 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3303
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3000 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3054
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3055 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3114
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3115 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3164
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 493 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 550
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 551 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 610
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 611 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 668
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4009 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4068
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V +
Sbjct: 4069 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDV 4128
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4129 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4158
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2938 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2990
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 2991 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3050
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3051 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3110
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3097 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3149
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3150 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3209
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3210 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3268
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V V+CG T+ LT++
Sbjct: 4091 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4143
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4144 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4203
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4204 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4262
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4146 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4198
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4199 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4258
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4259 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4295
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 603 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 655
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 656 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 715
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 716 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 753
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L II+IA +
Sbjct: 431 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIIKIAAHS 480
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 481 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 540
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 541 SAAITAEGELYTWGRGNYGRLG 562
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
+ +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 474 IKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 532
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 533 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 592
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 593 AQTLAVTENGQVWSWGDGDYGKLG 616
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3932 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3991
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3992 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4051
Query: 176 G 176
G
Sbjct: 4052 G 4052
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2921 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2979
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 2980 KSLFAVTVEGKVYACGEATNGRLGL 3004
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 517 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 571
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 572 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 631
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 632 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 690
Query: 180 LPVVQPCP 187
L V +P P
Sbjct: 691 LRVTKPEP 698
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3179 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3231
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3232 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3291
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3292 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3330
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3027 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3081
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3082 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3141
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3142 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3191
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 461 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 518
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 519 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 578
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 579 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 636
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4034 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4093
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 4094 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 4153
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4154 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4183
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2965 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3017
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3018 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3077
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3078 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3137
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3124 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3176
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3177 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3236
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3237 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3295
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4116 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4168
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4169 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4228
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4229 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4287
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4171 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4223
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4283
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4284 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4320
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 571 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 623
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 624 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 683
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 684 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 734
Query: 180 LPVVQPCPV 188
VV C V
Sbjct: 735 PFVVDICSV 743
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 399 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 448
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 449 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 508
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 509 SAAITAEGELYTWGRGNYGRLG 530
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 442 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 500
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 501 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 560
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 561 AQTLAVTENGQVWSWGDGDYGKLG 584
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4076
Query: 176 G 176
G
Sbjct: 4077 G 4077
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2948 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3006
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3007 KSLFAVTVEGKVYACGEATNGRLGL 3031
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G +EA IP V L + V V+CG T+ +TE
Sbjct: 572 ELYTWGRG-NYGRLGHGSSE--DEA----IPMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGK 684
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 685 GDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF 743
Query: 178 PGLPVVQPCP 187
L V +P P
Sbjct: 744 DTLRVTKPEP 753
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3177 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3229
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3230 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3289
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3290 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3328
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3025 GRLGLGLS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3079
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3080 GKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3139
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3140 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3189
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 14/183 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-----VPVAAVSCGGFFTMVLT 55
E+++WG +G GRLG G + L P + A V ++CG ++ +T
Sbjct: 516 EVFSWGCGDG-GRLGHG------DTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAIT 568
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVF 113
EG+L+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+
Sbjct: 569 AEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
SWG G +G+LG + K P +IE L D V + CG S A+T+ G++Y WG +
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQ 688
Query: 174 QLG 176
+LG
Sbjct: 689 RLG 691
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2963 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3015
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3016 VYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3075
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3076 EGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3135
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 81/136 (59%), Gaps = 2/136 (1%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
AV+ GG + L+ EG++++WG + +LG G R +P+++ +L + ++ +A GG H
Sbjct: 4047 AVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAH 4106
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S +T G +++WG G +G+LGHS +++Q P ++E L V +ACG + + +T+
Sbjct: 4107 SACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTD 4166
Query: 161 KGKLYMWGNAKDSQLG 176
++ WG+ +LG
Sbjct: 4167 DDTVWSWGDGDYGKLG 4182
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3122 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3174
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3175 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3234
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3235 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3293
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 17/176 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT+ G +
Sbjct: 4170 VWSWG-DGDYGKLGRGG------SDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAV 4222
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4223 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4282
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG T + P ++ AL + V +ACG + + A W +K S G
Sbjct: 4283 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA---------WSTSKPSSAG 4329
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+ L V V+CG T+ LT++
Sbjct: 4115 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDD 4167
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4168 DTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4227
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4228 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4286
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA----DEFVTHIACGGST 154
G+H LAL G+VFSWG G G+LGH T + P VI A + + V HIACG +
Sbjct: 504 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G P+LL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 739 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 776
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 83/144 (57%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR----II 94
V +AA S G + + L G++++WG LG GD V +PK++ + ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4015
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4016 GAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4075
Query: 176 G 176
G
Sbjct: 4076 G 4076
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ + G S A KVF WG QLG KVP E L+ V +A G
Sbjct: 2946 LIRKKSAGLESSAAVR-TKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3004
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3005 KSLFAVTVEGKVYACGEATNGRLGL 3029
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 548 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 602
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 603 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 662
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 663 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 721
Query: 180 LPVVQPCP 187
L V +P P
Sbjct: 722 LRVTKPEP 729
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 2926 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2978
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 2979 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3038
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3039 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3077
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 2774 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2828
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 2829 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2888
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 2889 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 2938
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 97/178 (54%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G RLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 492 EVYSWGCGDGR-RLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 549
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 550 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 609
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 610 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 667
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 3781 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 3840
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 3841 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 3900
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 3901 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3930
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2712 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2764
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 2765 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 2824
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 2825 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 2884
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 2871 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 2923
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 2924 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2983
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 2984 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3042
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 3863 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 3915
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 3916 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 3975
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 3976 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4034
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 3918 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3970
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 3971 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4030
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4031 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4067
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 602 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 654
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 655 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 714
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S+A
Sbjct: 715 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSSA 752
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 473 VKIAAHSDGHHY-LALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVV 531
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 532 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 591
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 592 AQTLAVTENGQVWSWGDGDYGKLG 615
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C +++ G++ NS+ + P+L+ L +++IA +
Sbjct: 430 VTQIACAEKRLLIVXRNGRVXTQAYNSDTLV----------PQLVQGLASRNVVKIAAHS 479
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G +LGH T + P VI A A + V HIACG +
Sbjct: 480 DGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 539
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 540 SAAITAEGELYTWGRGNYGRLG 561
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G LA+T DGK+++ GY
Sbjct: 3704 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATGY 3763
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3764 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 3823
Query: 176 G 176
G
Sbjct: 3824 G 3824
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2695 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2753
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 2754 KSLFAVTVEGKVYACGEATNGRLGL 2778
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G +EA IP V L + V V+CG T+ +TE
Sbjct: 572 ELYTWGRG-NYGRLGHGSSE--DEA----IPMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 684
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 685 GDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF 743
Query: 178 PGLPVVQPCP 187
L V +P P
Sbjct: 744 DTLRVTKPEP 753
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3175 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3227
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3287
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3288 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3023 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3187
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4031 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4090
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V +
Sbjct: 4091 RGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDV 4150
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4151 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2961 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3014 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3133
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3120 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3233 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V V+CG T+ LT++
Sbjct: 4113 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4165
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4166 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4225
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G +E G++Y WG+ + QLG
Sbjct: 4226 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG 4284
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4168 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4220
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + ++DG+V++WG
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDE 4280
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLG T + P ++ AL + V +ACG + + A W +K + G L
Sbjct: 4281 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA---------WSTSKPASAG--KL 4329
Query: 181 PVVQP 185
PV P
Sbjct: 4330 PVQVP 4334
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 739 QCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFA 776
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4014 GAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4073
Query: 176 G 176
G
Sbjct: 4074 G 4074
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2944 LIRRKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3003 KSLFAVTVEGKVYACGEATNGRLGL 3027
>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
Length = 1677
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 13/191 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
ELYTWGR G G LG G +EA IP V L + V V+CG T+ +TE
Sbjct: 562 ELYTWGR----GNYGRLGHGSSEDEA----IPMLVAGLKGLKVIDVACGSGDAQTLAVTE 613
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
GQ+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG
Sbjct: 614 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 673
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 674 KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-H 732
Query: 177 VPGLPVVQPCP 187
L V +P P
Sbjct: 733 FDTLRVTKPEP 743
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 506 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 563
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 564 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 623
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 624 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 681
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 616 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 668
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 669 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 728
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 729 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 766
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNSD----------TLAPQLVQGLASRNIVKIAAHS 493
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 494 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 553
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 554 SAAITAEGELYTWGRGNYGRLG 575
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 487 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 545
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 546 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 605
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 606 AQTLAVTENGQVWSWGDGDYGKLG 629
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 13/191 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
ELYTWGR G G LG G +EA IP V L + V V+CG T+ +TE
Sbjct: 572 ELYTWGR----GNYGRLGHGSSEDEA----IPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
GQ+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 684 KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-H 742
Query: 177 VPGLPVVQPCP 187
L V +P P
Sbjct: 743 FDTLRVTKPEP 753
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3175 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3227
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3287
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3288 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3023 GRLGLGLS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3187
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4032 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4091
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V +
Sbjct: 4092 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDV 4151
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4152 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4181
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2961 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3014 VYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3133
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3120 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3233 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V V+CG T+ LT++
Sbjct: 4114 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4166
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4167 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4226
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4227 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4285
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4169 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4221
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4222 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4281
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4282 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 739 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 776
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4015 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4074
Query: 176 G 176
G
Sbjct: 4075 G 4075
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2944 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3003 KSLFAVTVEGKVYACGEATNGRLGL 3027
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 13/191 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
ELYTWGR G G LG G +EA IP V L + V V+CG T+ +TE
Sbjct: 572 ELYTWGR----GNYGRLGHGSSEDEA----IPVLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
GQ+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 684 KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-H 742
Query: 177 VPGLPVVQPCP 187
L V +P P
Sbjct: 743 FDTLRVTKPEP 753
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3182 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3234
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3235 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3294
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P +++ L + +T +ACG S S A
Sbjct: 3295 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3331
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3030 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3084
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3085 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3144
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3145 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3194
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4039 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4098
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V +
Sbjct: 4099 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDV 4158
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4159 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4188
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2968 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3020
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3021 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3080
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3081 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3140
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3127 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3179
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3180 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3239
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3240 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3298
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V V+CG T+ LT++
Sbjct: 4121 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDD 4173
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4174 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4233
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4234 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4292
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4176 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4228
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4229 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4288
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4289 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4325
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 739 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 776
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +P+++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3962 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4021
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4022 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4081
Query: 176 G 176
G
Sbjct: 4082 G 4082
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2951 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3009
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3010 KSLFAVTVEGKVYACGEATNGRLGL 3034
>gi|291401444|ref|XP_002717009.1| PREDICTED: hect domain and RLD 3-like [Oryctolagus cuniculus]
Length = 974
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 52/137 (37%), Positives = 86/137 (62%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG NS+ +LG G P+++ +L V ++QI+ G
Sbjct: 130 IIQITCGDYHSLALSKGGELFAWGQNSHGQLGIGVMCPSVPTPQIVEHLAGVPLVQISAG 189
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+ L+ G V+SWG GQLG T+N+ P +IEAL ++ V +ACGGS +A +T
Sbjct: 190 EAHSMTLSMSGNVYSWGKNDLGQLGLGHTENKDSPCLIEALDNQKVEFVACGGSHTALLT 249
Query: 160 EKGKLYMWGNAKDSQLG 176
+ G+L+ +G K QLG
Sbjct: 250 QDGQLFTFGAGKYGQLG 266
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + P V+ L VP+ +S G +M L+ G
Sbjct: 148 ELFAWGQNS-HGQLGIGV-----MCPSVPTPQIVEHLAGVPLVQISAGEAHSMTLSMSGN 201
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + ++ +A GG H+ LT DG++F++G G
Sbjct: 202 VYSWGKNDLGQLGLGHTENKDSPCLIEALDNQKVEFVACGGSHTALLTQDGQLFTFGAGK 261
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
+GQLGH +N+ P ++ L VT IACG + + EK +
Sbjct: 262 YGQLGHKSKRNELKPRLVTVLVANRVTQIACGRTILNSDVEKSR 305
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 16/98 (16%)
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
++I +A G H L L+ DGK F + Y + H+ Q+ L ++ + I C
Sbjct: 88 MKIHSMAQGAEHVLVLSSDGKPFEYNY----SIEHAKFQS--------ILQEKTIIQITC 135
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLGV----PGLPVVQ 184
G S A+++ G+L+ WG QLG+ P +P Q
Sbjct: 136 GDYHSLALSKGGELFAWGQNSHGQLGIGVMCPSVPTPQ 173
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 13/191 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
ELYTWGR G G LG G +EA IP V L + V V+CG T+ +TE
Sbjct: 572 ELYTWGR----GNYGRLGHGSSEDEA----IPVLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
GQ+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 684 KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-H 742
Query: 177 VPGLPVVQPCP 187
L V +P P
Sbjct: 743 FDTLRVTKPEP 753
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3175 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3227
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3287
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3288 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3023 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3187
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4032 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4091
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V +
Sbjct: 4092 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDV 4151
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4152 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4181
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2961 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3014 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3133
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3120 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3233 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V V+CG T+ LT++
Sbjct: 4114 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDD 4166
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4167 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4226
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4227 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4285
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4169 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4221
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4222 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4281
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4282 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 739 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 776
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +P+++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4015 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4074
Query: 176 G 176
G
Sbjct: 4075 G 4075
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2944 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3003 KSLFAVTVEGKVYACGEATNGRLGL 3027
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGR GRLG G +EA + + + +K L V A G T+ +TE GQ+
Sbjct: 571 ELYTWGRG-NYGRLGHGSSE--DEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQV 626
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G +
Sbjct: 627 WSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDN 686
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q L
Sbjct: 687 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTL 745
Query: 181 PVVQPCP 187
V +P P
Sbjct: 746 RVTKPEP 752
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 515 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 572
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 632
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 633 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 3776 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 3835
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 3836 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 3895
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 3896 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3925
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 84/153 (54%), Gaps = 6/153 (3%)
Query: 10 GEGRL-GLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANS 67
G+G L +GPG E G +IP ++ L V + CG F++ LT+ G +W WG
Sbjct: 2927 GDGDLWKIGPG---PEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2983
Query: 68 NYELGRGDRVGGWKPKLLPNLVDVRIIQIA-NGGYHSLALTDDGKVFSWGYGGHGQLGHS 126
+ LG G V KP+++ L +I+ + +G H LA+TD G+V++WG HGQ G+
Sbjct: 2984 YFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNG 3043
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
T + P +++ L + +T +ACG S S A T
Sbjct: 3044 TTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3076
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 3858 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 3910
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 3911 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 3970
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 3971 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4029
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 3913 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3965
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 3966 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4025
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4026 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4062
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 625 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 738 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 775
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 502
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG 584
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 496 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 554
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 555 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 614
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 615 AQTLAVTENGQVWSWGDGDYGKLG 638
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 30 IPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P ++AL + ++CG + LT G+L+ WG LG GD KPK++ L
Sbjct: 2838 MPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 2897
Query: 89 VDVRIIQIANGGY--HSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFV 145
+ R+IQ+A G +LALTD+G VFS G G ++G + +P IE L + V
Sbjct: 2898 LGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGV 2957
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
I CG S A+T+ G ++ WG +LG
Sbjct: 2958 CQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2988
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 2868 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 2920
Query: 58 GQLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
G +++ G +++G G V G P+ + L + QI G SLALT G V++WG
Sbjct: 2921 GLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 2980
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA-AVTEKGKLYMWGNAKDSQL 175
G + +LGH + + P V+E L + + +C G+ AVT+ G++Y WG+ Q
Sbjct: 2981 KGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQ 3040
Query: 176 G 176
G
Sbjct: 3041 G 3041
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 14 LGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR 73
LG+ G P G ++ + + V AV G T +G++++WG + +LG
Sbjct: 2778 LGISSGTVPIPHGXIT---ALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGH 2834
Query: 74 GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV 133
R+ P+L+ L RI IA G HS ALT G++++WG G +G+LGH Q
Sbjct: 2835 FSRM----PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 2890
Query: 134 PMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPV 188
P +++ L V +ACG + + A+T++G ++ G+ ++G PG P V+ C +
Sbjct: 2891 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIG-PG-PEVKGCNI 2945
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3699 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3758
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3759 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 3818
Query: 176 G 176
G
Sbjct: 3819 G 3819
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 68/175 (38%), Gaps = 53/175 (30%)
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF- 113
T ++++WG N +LG P L + ++Q+A G A+T +GKV+
Sbjct: 2707 TIRTKVFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2766
Query: 114 --------SWGYG--------GHGQLG------------HSFTQN--------------- 130
+WG G HG + HS T
Sbjct: 2767 CGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGE 2826
Query: 131 ---------QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
++P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 2827 GDDGKLGHFSRMPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 2881
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 33/66 (50%)
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
A T KVFSWG QLG + KVP E L+ V +A G + AVT +GK+
Sbjct: 2705 AATIRTKVFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2764
Query: 165 YMWGNA 170
Y G A
Sbjct: 2765 YACGEA 2770
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGR GRLG G +EA + + + +K L V A G T+ +TE GQ+
Sbjct: 571 ELYTWGRG-NYGRLGHGSSE--DEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQV 626
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G +
Sbjct: 627 WSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDN 686
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q L
Sbjct: 687 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTL 745
Query: 181 PVVQPCP 187
V +P P
Sbjct: 746 RVTKPEP 752
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3169 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3221
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3222 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3281
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3282 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3320
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3017 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3071
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3072 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3131
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3132 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3181
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 515 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 572
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 632
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 633 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4024 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4083
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 4084 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 4143
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4144 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4173
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2955 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3007
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3008 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3067
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3068 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3127
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3114 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3166
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3167 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3226
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3227 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3285
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4106 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4158
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4159 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4218
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4219 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4277
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4161 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4213
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4214 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4273
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4274 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4310
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 625 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 738 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 775
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 502
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG 584
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 496 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 554
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 555 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 614
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 615 AQTLAVTENGQVWSWGDGDYGKLG 638
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3947 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4006
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4007 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4066
Query: 176 G 176
G
Sbjct: 4067 G 4067
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2938 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2996
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 2997 KSLFAVTVEGKVYACGEATNGRLGL 3021
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Query: 41 VAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIAN 98
+A +S G G ++ TEEG+++ WG N+ +LG G G+ P ++ NLV+ ++I++A
Sbjct: 76 IACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVAC 135
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAA 157
G +HS+ LT DG+V++WGY GQ+G T NQ +P V L ++ V +IACG S A
Sbjct: 136 GSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMA 195
Query: 158 VTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
V E G++Y+WG + QLG+ G QP P
Sbjct: 196 VVENGEVYVWGYNGNGQLGL-GSSGNQPTPCR 226
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E+YTWG + G++G G IP +V + V ++CG +M + E G
Sbjct: 148 EVYTWGYNNS-GQVGSGS------TANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G++++WG
Sbjct: 201 EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G++YMWG + +
Sbjct: 261 SYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVTF 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 6/177 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+YTWG + +LG G G + + V V+CG +MVLT +G++
Sbjct: 95 EVYTWGHN-AYSQLG----NGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEV 149
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI-IQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N++ ++G G P+ + + + +I + IA G S+A+ ++G+V+ WGY G
Sbjct: 150 YTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNG 209
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG + NQ P I AL V +ACG + + +T++G++Y WG QLG
Sbjct: 210 NGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG 266
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDGKVF 113
TE +++ G N + LG GD +P+ L +L +I ++ G G H + T++G+V+
Sbjct: 38 TENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVY 97
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+WG+ + QLG+ T + VP + L ++ V +ACG S +T G++Y WG
Sbjct: 98 TWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNS 157
Query: 173 SQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 158 GQVG-SGSTANQPIP 171
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 98/174 (56%), Gaps = 4/174 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGR GRLG G +EA + + + +K L V A G + +T+ GQ+
Sbjct: 572 ELYTWGRG-NYGRLGHGSSE--DEAIPMLV-AGLKGLKVIDVACGSGDAQPLAVTDNGQV 627
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G +
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDN 687
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
+LGH ++ + P ++EAL + V +A G + A+TE +++ WGN Q
Sbjct: 688 QRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNNDQCQ 741
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP +V AL V AV GG LT +G++++WG +
Sbjct: 2726 GRLGLG-----MSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2780
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 2781 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2840
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 2841 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 2890
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 97/178 (54%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G LA+TD+G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLG 691
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N +P ++ L V + CG F++ LT+ G +
Sbjct: 2878 VFSWG-DGDFGKLGRGGSEGCN------VPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2930
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 2931 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 2990
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 2991 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3029
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 82/136 (60%), Gaps = 2/136 (1%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L ++ IA GG H
Sbjct: 3722 AVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAH 3781
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S +T G +++WG G +G+LGHS +++Q P ++EAL V +ACG + + +T+
Sbjct: 3782 SACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 3841
Query: 161 KGKLYMWGNAKDSQLG 176
++ WG+ +LG
Sbjct: 3842 DDTVWSWGDGDYGKLG 3857
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 4/153 (2%)
Query: 28 LSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLL 85
+ +PS + L + V V+ G +T EG+++ G +N LG G G P+ +
Sbjct: 2684 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQV 2743
Query: 86 PNLVD--VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
L V+ + + +GG H+ ALT DGKVFSWG G G+LGH N P +IEAL +
Sbjct: 2744 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTK 2803
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ IACG S SAA+T G+LY WG + +LG
Sbjct: 2804 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 2836
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 2823 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 2875
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 2876 GLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2935
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 2936 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2994
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRG------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + Q + P ++ L + + IACG + S A
Sbjct: 739 QCQHFDTLHQTKPEPSLLPGLDTKHIVGIACGPAQSFA 776
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615
Query: 155 SA--AVTEKGKLYMWGNAKDSQLG 176
+ AVT+ G+++ WG+ +LG
Sbjct: 616 AQPLAVTDNGQVWSWGDGDYGKLG 639
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 94/223 (42%), Gaps = 54/223 (24%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG E +G+LG G R P + P V++L V ++ GG + +T G
Sbjct: 3738 EVYSWGEAE-DGKLGHG-NRSPCDR-----PRVVESLRGTEVVDIAAGGAHSACVTSAGD 3790
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGY 117
L+ WG LG D KPKL+ L R++ +A +G +L LTDD V+SWG
Sbjct: 3791 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGD 3850
Query: 118 GGHGQLGHSFTQNQKVPMV----------------------------------------- 136
G +G+LG + KVPM
Sbjct: 3851 GDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRR 3910
Query: 137 ---IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
++ L + V IA G TE+G++Y WG+ + QLG
Sbjct: 3911 PRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLG 3953
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 54/204 (26%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V V+CG T+ LT++
Sbjct: 3790 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD 3842
Query: 58 GQLWNWGANSNYELGRGD--------------RVG-------GW---------------- 80
+W+WG +LGRG RVG W
Sbjct: 3843 DTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGH 3902
Query: 81 -------KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV 133
+P+ + L ++I IA G H + T++G+V++WG GQLG T +
Sbjct: 3903 GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQR 3962
Query: 134 PMVIEALADEFVTHIACGGSTSAA 157
P ++ AL V +ACG + + A
Sbjct: 3963 PRLVAALQGRKVNRVACGSAHTLA 3986
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3631 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3690
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3691 GAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 3750
Query: 176 G 176
G
Sbjct: 3751 G 3751
>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
Length = 2948
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 13/191 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
ELYTWGR G G LG G +EA IP V L + V V+CG T+ +TE
Sbjct: 533 ELYTWGR----GNYGRLGHGSSEDEA----IPMLVAGLKGLKVIDVACGSGDAQTLAVTE 584
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
GQ+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG
Sbjct: 585 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 644
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 645 KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-H 703
Query: 177 VPGLPVVQPCP 187
L V +P P
Sbjct: 704 FDTLRVTKPEP 714
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 477 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 534
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 535 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 594
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 595 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 652
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 587 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 639
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 640 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 699
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 700 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 737
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 415 VTQIACAEKRFLILSRNGRVYTQAYNSD----------TLAPQLVQGLASRNIVKIAAHS 464
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 465 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 524
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 525 SAAITAEGELYTWGRGNYGRLG 546
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 458 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 516
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 517 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 576
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 577 AQTLAVTENGQVWSWGDGDYGKLG 600
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Query: 41 VAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIAN 98
+A +S G G ++ TEEG+++ WG N+ +LG G G+ P ++ NLV+ ++I++A
Sbjct: 81 IACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVAC 140
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAA 157
G +HS+ LT DG+V++WGY GQ+G T NQ +P V L ++ V +IACG S A
Sbjct: 141 GSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMA 200
Query: 158 VTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
V E G++Y+WG + QLG+ G QP P
Sbjct: 201 VVENGEVYVWGYNGNGQLGL-GSSGNQPTPCR 231
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E+YTWG + G++G G IP +V + V ++CG +M + E G
Sbjct: 153 EVYTWGYNNS-GQVGSGS------TANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENG 205
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G++++WG
Sbjct: 206 EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGAN 265
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G++YMWG + + +
Sbjct: 266 SYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVIL 325
Query: 178 PGL 180
P L
Sbjct: 326 PHL 328
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 6/177 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+YTWG + +LG G G + + V V+CG +MVLT +G++
Sbjct: 100 EVYTWGHN-AYSQLG----NGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEV 154
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI-IQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N++ ++G G P+ + + + +I + IA G S+A+ ++G+V+ WGY G
Sbjct: 155 YTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNG 214
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG + NQ P I AL V +ACG + + +T++G++Y WG QLG
Sbjct: 215 NGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG 271
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDGKVF 113
TE +++ G N + LG GD +P+ L +L +I ++ G G H + T++G+V+
Sbjct: 43 TENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVY 102
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+WG+ + QLG+ T + VP + L ++ V +ACG S +T G++Y WG
Sbjct: 103 TWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNS 162
Query: 173 SQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 163 GQVG-SGSTANQPIP 176
>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 108/192 (56%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + + P V+ L VP+A +S G +M L+ G
Sbjct: 158 ELFAWGQN-LHGQLGVG-----RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + ++ +A GG HS LT DG +F++G G
Sbjct: 212 IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGK 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ KD QLG
Sbjct: 272 HGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
Query: 179 GL-PVVQPCPVE 189
G + P PV+
Sbjct: 332 GTRDQLMPLPVK 343
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 85/144 (59%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG++E G+LGLG ++ PS ++ L V V+CGG + +LT++G L
Sbjct: 212 IYSWGKNEC-GQLGLGHTESKDD------PSLIEGLDNQKVEFVACGGSHSALLTQDGLL 264
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA + +LG +P L+ LV R+ QIA G +H+LA D GKVFS+G G
Sbjct: 265 FTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T++Q +P+ ++ + E
Sbjct: 325 DGQLGNGGTRDQLMPLPVKVSSSE 348
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 15/156 (9%)
Query: 25 AGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+GG P +K + + +V G ++L+ +G+ + + S L R + +
Sbjct: 82 SGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHL-RFESI------ 134
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALA 141
L + +IIQI G YHSLAL+ G++F+WG HGQL G F + P ++E LA
Sbjct: 135 ----LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFP-STTTPQIVEHLA 189
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ I+ G + S A++ G +Y WG + QLG+
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGL 225
>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
Length = 1016
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 108/192 (56%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + + P V+ L VP+A +S G +M L+ G
Sbjct: 158 ELFAWGQN-LHGQLGVG-----RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + ++ +A GG HS LT DG +F++G G
Sbjct: 212 IYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGK 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ KD QLG
Sbjct: 272 HGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
Query: 179 GL-PVVQPCPVE 189
G + P PV+
Sbjct: 332 GTRDQLMPLPVK 343
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 84/144 (58%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG++E G+LGLG + PS ++ L V V+CGG + +LT++G L
Sbjct: 212 IYSWGKNEF-GQLGLGHTESKD------YPSLIEGLDNQKVEFVACGGSHSALLTQDGLL 264
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA + +LG +P L+ LV R+ QIA G +H+LA D GKVFS+G G
Sbjct: 265 FTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T++Q +P+ ++ + E
Sbjct: 325 DGQLGNGGTRDQLMPLPVKVSSSE 348
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 15/156 (9%)
Query: 25 AGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+GG P +K + + +V G ++L+ +G+ + + S L R + V
Sbjct: 82 SGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHL-RFENV------ 134
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALA 141
L + +IIQI G YHSLAL+ G++F+WG HGQL G F + P ++E LA
Sbjct: 135 ----LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFP-STTTPQIVEHLA 189
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ I+ G + S A++ G +Y WG + QLG+
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGL 225
>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
Length = 1024
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 108/192 (56%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + + P V+ L VP+A +S G +M L+ G
Sbjct: 158 ELFAWGQN-LHGQLGVG-----RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + ++ +A GG HS LT DG +F++G G
Sbjct: 212 IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGK 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ KD QLG
Sbjct: 272 HGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
Query: 179 GL-PVVQPCPVE 189
G + P PV+
Sbjct: 332 GTRDQLMPLPVK 343
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 85/144 (59%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG++E G+LGLG ++ PS ++ L V V+CGG + +LT++G L
Sbjct: 212 IYSWGKNEC-GQLGLGHTESKDD------PSLIEGLDNQKVEFVACGGSHSALLTQDGLL 264
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA + +LG +P L+ LV R+ QIA G +H+LA D GKVFS+G G
Sbjct: 265 FTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T++Q +P+ ++ + E
Sbjct: 325 DGQLGNGGTRDQLMPLPVKVSSSE 348
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 15/156 (9%)
Query: 25 AGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+GG P +K + + +V G ++L+ +G+ + + S L R + +
Sbjct: 82 SGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHL-RFESI------ 134
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALA 141
L + +IIQI G YHSLAL+ G++F+WG HGQL G F + P ++E LA
Sbjct: 135 ----LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFP-STTTPQIVEHLA 189
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ I+ G + S A++ G +Y WG + QLG+
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGL 225
>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
Length = 2984
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 13/191 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
ELYTWGR G G LG G +EA IP V L + V V+CG T+ +TE
Sbjct: 562 ELYTWGR----GNYGRLGHGSSEDEA----IPMLVAGLKGLKVIDVACGSGDAQTLAVTE 613
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
GQ+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG
Sbjct: 614 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 673
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 674 KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-H 732
Query: 177 VPGLPVVQPCP 187
L V +P P
Sbjct: 733 FDTLRVTKPEP 743
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 506 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 563
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 564 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 623
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 624 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 681
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 616 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 668
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 669 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 728
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 729 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 766
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNSD----------TLAPQLVQGLASRNIVKIAAHS 493
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 494 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 553
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 554 SAAITAEGELYTWGRGNYGRLG 575
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 487 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 545
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 546 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 605
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 606 AQTLAVTENGQVWSWGDGDYGKLG 629
>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
Full=Cyclin-E-binding protein 1; AltName: Full=HECT
domain and RCC1-like domain-containing protein 5
gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 108/192 (56%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + + P V+ L VP+A +S G +M L+ G
Sbjct: 158 ELFAWGQN-LHGQLGVG-----RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + ++ +A GG HS LT DG +F++G G
Sbjct: 212 IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGK 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ KD QLG
Sbjct: 272 HGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
Query: 179 GL-PVVQPCPVE 189
G + P PV+
Sbjct: 332 GTRDQLMPLPVK 343
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 85/144 (59%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG++E G+LGLG ++ PS ++ L V V+CGG + +LT++G L
Sbjct: 212 IYSWGKNEC-GQLGLGHTESKDD------PSLIEGLDNQKVEFVACGGSHSALLTQDGLL 264
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA + +LG +P L+ LV R+ QIA G +H+LA D GKVFS+G G
Sbjct: 265 FTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T++Q +P+ ++ + E
Sbjct: 325 DGQLGNGGTRDQLMPLPVKVSSSE 348
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 15/156 (9%)
Query: 25 AGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+GG P +K + + +V G ++L+ +G+ + + S L R + +
Sbjct: 82 SGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHL-RFESI------ 134
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALA 141
L + +IIQI G YHSLAL+ G++F+WG HGQL G F + P ++E LA
Sbjct: 135 ----LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFP-STTTPQIVEHLA 189
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ I+ G + S A++ G +Y WG + QLG+
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGL 225
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGR GRLG G +EA + + + +K L V A G T+ +TE GQ+
Sbjct: 572 ELYTWGRG-NYGRLGHGSSE--DEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQV 627
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G +
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDN 687
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q L
Sbjct: 688 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTL 746
Query: 181 PVVQPCP 187
V +P P
Sbjct: 747 RVTKPEP 753
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3175 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3227
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3287
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P +++ L + +T +ACG S S A
Sbjct: 3288 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3023 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3187
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLG 691
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4032 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4091
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V +
Sbjct: 4092 RGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDV 4151
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4152 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4181
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2961 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3014 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3133
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3120 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3233 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V V+CG T+ LT++
Sbjct: 4114 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4166
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4167 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4226
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G +E G++Y WG+ + QLG
Sbjct: 4227 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG 4285
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4169 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4221
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + ++DG+V++WG
Sbjct: 4222 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDE 4281
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLG T + P ++ AL + V +ACG + + A W +K + G L
Sbjct: 4282 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA---------WSTSKPASAG--KL 4330
Query: 181 PVVQP 185
PV P
Sbjct: 4331 PVQVP 4335
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 739 QCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFA 776
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4014
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4015 GAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4074
Query: 176 G 176
G
Sbjct: 4075 G 4075
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2944 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3003 KSLFAVTVEGKVYACGEATNGRLGL 3027
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 98/167 (58%), Gaps = 9/167 (5%)
Query: 10 GEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNY 69
G G GLG G ++ S P K+++L V A++ GG ++ LT+ G ++++G
Sbjct: 153 GNGTSGLGHGNTEDQ----STPKKIESLS-DVQAIAAGGNHSLALTKSGDVYSFGFGLFG 207
Query: 70 ELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ 129
LG GD +PK + +L D++ IA GG HSLALT G V+S+G+G HGQLGH T+
Sbjct: 208 RLGHGDTDSQLEPKKIEDLSDIQ--AIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTE 265
Query: 130 NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
NQ P IE L+D + +A G + S A+T+ G++Y +G QLG
Sbjct: 266 NQLTPKKIEDLSD--IQAVAAGANHSLALTKSGEVYSFGRGNTGQLG 310
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 87/158 (55%), Gaps = 11/158 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLG G E P K++ L + A++ GG ++ LT+ G ++++G + +L
Sbjct: 207 GRLGHGDTDSQLE------PKKIEDLS-DIQAIAAGGNHSLALTKSGDVYSFGWGLHGQL 259
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G GD PK + +L D++ +A G HSLALT G+V+S+G G GQLGH T +Q
Sbjct: 260 GHGDTENQLTPKKIEDLSDIQ--AVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQ 317
Query: 132 KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
P IE L D + IA G S A+T+ G +Y +GN
Sbjct: 318 LTPKKIEGLKD--IQAIAAGDFHSLALTKSGDVYSFGN 353
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 10/153 (6%)
Query: 16 LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD 75
LG G N+ P K++ L + A++ G ++ LT+ G ++++G LG G+
Sbjct: 60 LGHGDTANQLA----PKKIEGLS-DIQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGN 114
Query: 76 RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
+PK + L D++ IA G +HSLALT G V+S+G G G LGH T++Q P
Sbjct: 115 TDSQLEPKKIEGLSDIQ--AIAAGDFHSLALTKSGDVYSFGNGTSG-LGHGNTEDQSTPK 171
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
IE+L+D V IA GG+ S A+T+ G +Y +G
Sbjct: 172 KIESLSD--VQAIAAGGNHSLALTKSGDVYSFG 202
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 6/128 (4%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD 90
P K++ L + AV+ G ++ LT+ G+++++G + +LG GD PK + L D
Sbjct: 270 PKKIEDLS-DIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEGLKD 328
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
++ IA G +HSLALT G V+S+G G G LGH T NQ P IE L D + IA
Sbjct: 329 IQ--AIAAGDFHSLALTKSGDVYSFGNGTSG-LGHGDTANQLEPKKIEGLTD--IQAIAA 383
Query: 151 GGSTSAAV 158
G + S A+
Sbjct: 384 GANHSLAL 391
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++++G +LG GD PK + L D++ IA G HSLALT G V+S+G+G
Sbjct: 49 VFSFGMGMYGKLGHGDTANQLAPKKIEGLSDIQ--AIAAGTNHSLALTKSGDVYSFGFGL 106
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G+LGH T +Q P IE L+D + IA G S A+T+ G +Y +GN
Sbjct: 107 FGRLGHGNTDSQLEPKKIEGLSD--IQAIAAGDFHSLALTKSGDVYSFGN 154
>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G +EA IP V L + V V+CG T+ +TE
Sbjct: 571 ELYTWGRG-NYGRLGHGSSE--DEA----IPMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 684 GDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF 742
Query: 178 PGLPVVQPCP 187
L V +P P
Sbjct: 743 DTLRVTKPEP 752
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 515 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 572
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 632
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 633 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 625 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 738 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 775
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSD----------TLAPQLVQGLASRNIVKIAAHS 502
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG 584
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 496 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 554
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 555 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 614
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 615 AQTLAVTENGQVWSWGDGDYGKLG 638
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGR GRLG G +EA + + + +K L V A G T+ +TE GQ+
Sbjct: 572 ELYTWGRG-NYGRLGHGSSE--DEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQV 627
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G +
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDN 687
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q L
Sbjct: 688 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTL 746
Query: 181 PVVQPCP 187
V +P P
Sbjct: 747 RVTKPEP 753
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3173 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3225
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3226 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3285
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3286 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3324
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3021 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3075
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3076 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3135
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3136 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3185
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLG 691
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4030 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4089
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V +
Sbjct: 4090 RGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDV 4149
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4150 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4179
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2959 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3011
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3012 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3071
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3072 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3131
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3118 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3170
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3171 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3230
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3231 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3289
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V V+CG T+ LT++
Sbjct: 4112 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4164
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4165 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4224
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G +E G++Y WG+ + QLG
Sbjct: 4225 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG 4283
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4167 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4219
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + ++DG+V++WG
Sbjct: 4220 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDE 4279
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLG T + P ++ AL + V +ACG + + A W +K + G L
Sbjct: 4280 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA---------WSTSKPASAG--KL 4328
Query: 181 PVVQP 185
PV P
Sbjct: 4329 PVQVP 4333
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 739 QCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFA 776
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3953 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4012
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4013 GAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4072
Query: 176 G 176
G
Sbjct: 4073 G 4073
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2942 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3000
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3001 KSLFAVTVEGKVYACGEATNGRLGL 3025
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG + G+LGLG G + L+ PS+V P + V+CG T+ LT G+
Sbjct: 6 ELYCWG-NTSHGQLGLG---GIEDEQILT-PSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+N + +LG + +P L+P L+D ++QIA G HS+AL++ G+V SWG
Sbjct: 61 VYACGSNDHSQLGHD--LPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDND 118
Query: 120 HGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + Q+ ++P ++ L + V IACG + S A+T G+LY WG+ QLGV
Sbjct: 119 CGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + G+LG+ P E + P ++ L +PVAA++CGG + ++++
Sbjct: 163 ELYSWGSN-IYGQLGVNT---PKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSA 218
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + + +A G S+ LT++G VF+ G G
Sbjct: 219 VFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 278
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH F N+ +P ++ L +T +ACG T A V +G++Y +G QLG
Sbjct: 279 YGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLG 336
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 13/170 (7%)
Query: 19 GRGPNEAGGLSIPSKVKALPVP------VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
G + G +P+K + L +P V ++CG +M L+E GQ+ +WG N +LG
Sbjct: 65 GSNDHSQLGHDLPTK-RPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLG 123
Query: 73 RG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG----HSF 127
+ D+ PK++ LV ++QIA G HSLALT G+++SWG +GQLG
Sbjct: 124 QATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNTPKEV 183
Query: 128 TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
T + + P+ + L V IACGG+ S +++ ++ WG QLG+
Sbjct: 184 THSNQ-PVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGL 232
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LGL N+ S P+++K L + V V+CG F++ LT EG +
Sbjct: 219 VFGWGRNNC-GQLGL------NDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+++ L+ I Q+A G H+LAL G+V+ +G G
Sbjct: 272 FTCGAGAYGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGS 331
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG T++ +P V+
Sbjct: 332 SGQLGTRSTKSLTLPQVV 349
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 106 LTDDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAAVTEKGK 163
+T +++ WG HGQLG +++++ P + D + +ACG + +T G+
Sbjct: 1 MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60
Query: 164 LYMWGNAKDSQLGVPGLPVVQP 185
+Y G+ SQLG LP +P
Sbjct: 61 VYACGSNDHSQLG-HDLPTKRP 81
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 102/179 (56%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG G+LGLG G + L+ PS++ P V V+CG T+ LT G+
Sbjct: 6 ELYCWG-STSHGQLGLG---GIEDEQILT-PSQIPWTPDTAVQQVACGHRHTLFLTANGK 60
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+N + +LG + +P L+P L D +IQI+ G HSLAL++ G+V SWG
Sbjct: 61 VYACGSNDHSQLGH--ELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDND 118
Query: 120 HGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH+ + ++P V+ L + V IACG + S A+T G+LY WG+ QLGV
Sbjct: 119 CGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 99/178 (55%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + G+LG+ P + + P ++ L +P+AA++CGG + ++++ G
Sbjct: 163 ELYSWGSN-IYGQLGVN---SPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGA 218
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + + +A G S+ LT++G VF+ G G
Sbjct: 219 VFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 278
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH F+ N+ +P ++ L +T +ACG T A V +G++Y +G QLG
Sbjct: 279 YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLG 336
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 11/169 (6%)
Query: 19 GRGPNEAGGLSIPSKVKALPVP------VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
G + G +P+K + L +P V +SCG ++ L+E GQ+ +WG N +LG
Sbjct: 65 GSNDHSQLGHELPTK-RPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLG 123
Query: 73 RG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
D+ PK++ LV ++QIA G HSLALT G+++SWG +GQLG + ++
Sbjct: 124 HATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDL 183
Query: 132 ---KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
P+ + L + IACGG+ S +++ G ++ WG QLG+
Sbjct: 184 THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL 232
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LGL N+ + P+++K L + V V+CG F++ LT EG +
Sbjct: 219 VFGWGRNNC-GQLGL------NDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+++ L+ I Q+A G H+LAL G+V+++G G
Sbjct: 272 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGS 331
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG T++ +P V+
Sbjct: 332 SGQLGTRSTKSLMLPQVV 349
>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 894
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGR GRLG G +EA + + + +K L V A G T+ +T+ GQ+
Sbjct: 614 ELYTWGRG-NYGRLGHGSSE--DEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTDNGQV 669
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G +
Sbjct: 670 WSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDN 729
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q L
Sbjct: 730 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTL 788
Query: 181 PVVQPCP 187
V +P P
Sbjct: 789 RVTKPEP 795
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 558 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 615
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+TD+G+V+SWG G
Sbjct: 616 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDG 675
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 676 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 733
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 668 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 720
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 721 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 780
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 781 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 831
Query: 180 LPVVQPCPV 188
VV C +
Sbjct: 832 PFVVDICAM 840
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 496 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 545
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 546 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 605
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 606 SAAITAEGELYTWGRGNYGRLG 627
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 539 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 597
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 598 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 657
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVT+ G+++ WG+ +LG
Sbjct: 658 AQTLAVTDNGQVWSWGDGDYGKLG 681
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 100/172 (58%), Gaps = 10/172 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G + ++ P V AL V V+CG T+ +TE
Sbjct: 522 ELYTWGRG-NYGRLGHG------SSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTEN 574
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ I+++ G S+ALT DG+V++WG
Sbjct: 575 GQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGK 634
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G + +LGH ++ + P ++++L + V IA G + A+T++G+++ WG+
Sbjct: 635 GDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGS 686
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
++Y G + GRLGLG +G + IP ++ AL V AV GG M LT +
Sbjct: 2974 KIYACG-EATNGRLGLGLS-----SGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVD 3027
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG + +LG R+ KP+L+ L RI IA G HS A+T G+++SWG
Sbjct: 3028 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGL 3087
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQL 175
G +G+LGH Q P +++ L V +ACG + + A+T++G ++ WG+ +L
Sbjct: 3088 GEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3147
Query: 176 G 176
G
Sbjct: 3148 G 3148
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3136 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3188
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3189 WTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3248
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3249 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3287
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 96/178 (53%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E ++ S K V ++CG ++ +T +G+L
Sbjct: 466 EVYSWGCGDG-GRLGHGDATYLEEPALITTFSG-KQTGKQVVQIACGSTYSAAVTADGEL 523
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++ +A +G +LA+T++G+V+SWG G
Sbjct: 524 YTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDG 583
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P ++E L D + + CG S A+T+ G++Y WG + +LG
Sbjct: 584 DYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLG 641
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2922 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2974
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G + P+ + L + V+ + + +GG H++ALT DGKVFSWG
Sbjct: 2975 IYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 3034
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3035 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLG 3094
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L V +
Sbjct: 3977 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEV 4036
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ IA GG HS +T G++F+WG G +G+LGH +++Q P +++AL V +ACG
Sbjct: 4037 VDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSG 4096
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4097 DAQTLCLTDDDMVWSWGDGDYGKLG 4121
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
EL+TWG+ GR G LG G ++ P V AL V V+CG T+ LT+
Sbjct: 4054 ELFTWGK----GRYGRLGHGDSEDQLK----PKLVDALQGHRVIDVACGSGDAQTLCLTD 4105
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4106 DDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4165
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4166 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4225
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELY+WG E GRLG G P VK L V V+CG T+ LT+E
Sbjct: 3081 ELYSWGLGE-YGRLGHGDNTTQLR------PKLVKVLLGHRVIQVACGSRDAQTLALTDE 3133
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3134 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3193
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3194 GDYFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3252
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P V+ L + + V CG F++ LT++GQ
Sbjct: 576 QVWSWG-DGDYGKLGRGG------SDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQ 628
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N LG G PKLL +L +++ IA G H LALTD+G+V SWG
Sbjct: 629 VYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSND 688
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + N+K P + L + + I+CG S A
Sbjct: 689 KLQHFDTLFPNKKQPKALPGLNSKHIVGISCGPGQSFA 726
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4109 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4161
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4162 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4221
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + + +ACG + + A
Sbjct: 4222 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4258
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA G F + L+ G++++WG LG GD +P L+ +++
Sbjct: 447 VKLAAHPDGQHF-LALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVV 505
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
QIA G +S A+T DG++++WG G +G+LGH +++ PM++ AL + V +ACG
Sbjct: 506 QIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGD 565
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 566 AQTLAVTENGQVWSWGDGDYGKLG 589
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 17/153 (11%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P KAL V + C ++L+ G ++ NY + P L+ L
Sbjct: 393 PIHCKALSSTGVTQIVCSEKVFLILSRSGAVYT----QNY------KSTTLAPMLIHGLS 442
Query: 90 DVRIIQIAN--GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA----DE 143
+I+++A G H LAL+ G+V+SWG G G+LGH + P +I + +
Sbjct: 443 SRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGK 502
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V IACG + SAAVT G+LY WG +LG
Sbjct: 503 QVVQIACGSTYSAAVTADGELYTWGRGNYGRLG 535
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3895 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3954
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3955 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4014
Query: 176 G 176
G
Sbjct: 4015 G 4015
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
KVF WG QLG KVP E L+ V +A G + AVT +GK+Y G A
Sbjct: 2922 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEA 2981
Query: 171 KDSQLGV 177
+ +LG+
Sbjct: 2982 TNGRLGL 2988
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 102/179 (56%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG + G+LGLG G E L+ PS++ P V ++CG T+ LT G+
Sbjct: 2 ELYCWG-NASHGQLGLG---GIEEEQILT-PSRIPWKPDSAVNQIACGHRHTLFLTASGK 56
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+N +LG + +P +P L D I QIA G HS+AL++ G+VFSWG
Sbjct: 57 VYACGSNDYSQLGH--ELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNE 114
Query: 120 HGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH+ Q+ K+P ++ L + V IACG + S A+T G+LY WG+ QLGV
Sbjct: 115 CGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGV 173
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 98/179 (54%), Gaps = 6/179 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + G+LG+ PN+ + P ++ L +PV+A++CGG + ++++
Sbjct: 159 ELYSWGSN-LYGQLGVS---SPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSA 214
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + + +A G S+ LT +G VF+ G G
Sbjct: 215 VFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGA 274
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH F+ N+ +P ++ L ++ +ACG T A V +G++Y +G QLG
Sbjct: 275 YGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGT 333
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 11/161 (6%)
Query: 27 GLSIPSKVKALPVP------VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW 80
G +P+K + L +P + ++CG +M L+E GQ+++WG N +LG
Sbjct: 69 GHELPTK-RPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQLGHASDQDIV 127
Query: 81 K-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF---TQNQKVPMV 136
K PK++ NLV ++QIA G HSLALT G+++SWG +GQLG S Q PM
Sbjct: 128 KLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPNDLQQSNTPMR 187
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ L V+ IACGG+ S +++ ++ WG QLG+
Sbjct: 188 LTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGL 228
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LGL N+ + P+++K L + V V+CG F++ LT EG +
Sbjct: 215 VFGWGRNNC-GQLGL------NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGV 267
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+++ L+ I Q+A G H+LAL G+++ +G G
Sbjct: 268 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGS 327
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG T++ +P ++
Sbjct: 328 SGQLGTRNTKSLNLPQLV 345
>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
pisum]
Length = 4404
Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 8 DEGEGRLGL---GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWG 64
D GRLG+ G P + GLS + AV GG M L+ +G++ +WG
Sbjct: 2652 DSSGGRLGIPFCGKVSSPRQIPGLS------QFVIKTVAVHSGGKHAMALSLDGKVLSWG 2705
Query: 65 ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
+ +LG GD + PKL+ +L+ R+ IA G HS A+T DG++++WG G +G+LG
Sbjct: 2706 DGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQYGRLG 2765
Query: 125 HSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLGVPG 179
HS +Q P +++ + +T +ACG + + A+ +G +Y WG+ +LG G
Sbjct: 2766 HSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGG 2822
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 60/179 (33%), Positives = 99/179 (55%), Gaps = 6/179 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y G E GRLG+GP N + P V+ L + AV+ GG + L+ G+
Sbjct: 3597 KVYASGYTE-SGRLGIGPYNPKNPY--VVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGE 3653
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG + +LG G+RV KP+L+ +L D II IA GG+HS A++ G +++WG G
Sbjct: 3654 VYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGR 3713
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+G+LGH ++ P +++ L + V +ACG + + VT ++ WG+ +LG
Sbjct: 3714 YGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLG 3772
Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++ +WG E +G+LG G + L P + +L V ++CG + +T +G+
Sbjct: 2700 KVLSWGDGE-DGKLGHG------DILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGE 2752
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG D V PKL+ V I Q+A G +LAL +G V+SWG
Sbjct: 2753 LYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGD 2812
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G G+LG + P +E L V I CG S A+T G+++ WG + +LG+
Sbjct: 2813 GDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGL 2872
Score = 89.4 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG N + +P K+++L + + CG F++ L+ G L
Sbjct: 3760 VWSWG-DGDYGKLG------HNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTL 3812
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G KPK + L +I+Q + G H LALTDDG+V++WG
Sbjct: 3813 YTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDE 3872
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG P I AL + + ++CG + S A
Sbjct: 3873 GQLGDGTAHPIARPRPIAALKGKRIQQVSCGSAHSFA 3909
Score = 89.4 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVPVAAVSCGG--FFTMVLTEE 57
ELYTWG+ + GRLG ++ P VK + + V+CG T+ L E
Sbjct: 2752 ELYTWGQGQ-YGRLG------HSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSE 2804
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + LV R++QI G S+ALT G+V++WG
Sbjct: 2805 GNVYSWGDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGK 2864
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LG ++ + P ++ L + HIA G AV+ +G +Y WG+ Q G
Sbjct: 2865 GEYYRLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQG 2923
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 55/159 (34%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG G + G P KV+ L V + CG F++ LT GQ+
Sbjct: 2807 VYSWG-DGDFGKLGRG------GSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQV 2859
Query: 61 WNWGANSNYE--LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
W WG Y LGRG+ V +P L+ L V I IA G H +A++ G V+ WG
Sbjct: 2860 WTWGKGEYYRLGLGRGEHVR--RPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDN 2917
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
HGQ G+ T + P ++ + + + CG S S A
Sbjct: 2918 DHGQQGNGTTNANQEPRLVTNFNNIKINRVGCGSSQSIA 2956
Score = 84.0 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 11/191 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGG--FFTMVLTEEG 58
LYTWG+ GRLG G + P V+ L V V+CG TM +T +
Sbjct: 3706 LYTWGKGR-YGRLGHG------DYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDD 3758
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W+WG +LG P + +L IIQI G S+AL+ +G +++WG G
Sbjct: 3759 NVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKG 3818
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG-V 177
+ +LGH +++ + P + L + + + G A+T+ G++Y WG+ + QLG
Sbjct: 3819 DYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLGDG 3878
Query: 178 PGLPVVQPCPV 188
P+ +P P+
Sbjct: 3879 TAHPIARPRPI 3889
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
LA+T G+V+SWG G LGH + P I A + V ++CG AAVTE G
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDG 564
Query: 163 KLYMWG 168
KLYMWG
Sbjct: 565 KLYMWG 570
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 57 EGQLWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
E ++ WG N +LG G +V +P L ++ I+I G ++++GKVF
Sbjct: 2592 EYAVYVWGLNDKGQLGGLNGSKVK--RPTFNEALTALKPIEIVGGSKSLFIVSNEGKVFV 2649
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKD 172
G G+LG F P I L+ + +A GG + A++ GK+ WG+ +D
Sbjct: 2650 CGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGED 2709
Query: 173 SQLG 176
+LG
Sbjct: 2710 GKLG 2713
Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 42/191 (21%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP----------VAAVSCGGFF 50
E+Y+WG NE G L K + P P V VSCG F
Sbjct: 512 EVYSWG---------------VNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDF 556
Query: 51 TMVLTEEGQLWNWGA---NSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLA 105
+TE+G+L+ WG +SN + P+L+ ++ + + +++ G ++LA
Sbjct: 557 CAAVTEDGKLYMWGKILHSSNC---------CYTPELVKSISEWHVSKVSCGSSINNTLA 607
Query: 106 LTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
L+ +G VFS+ Y + + N M++ D + I C +A + ++
Sbjct: 608 LSREGYVFSFEYRNSDRGCDDKSLNVIPSMIV---FDYEIVSIYCHNDVNAVIDCANNVF 664
Query: 166 MWGNAKDSQLG 176
WG ++ LG
Sbjct: 665 TWGRGNNNMLG 675
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 7/134 (5%)
Query: 50 FTMVLTEEGQL-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
+ M GQ+ + WG N +L D KP +L ++ Q+ G A+T
Sbjct: 3535 WNMTWGGNGQVVYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTS 3594
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQK-----VPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
GKV++ GY G+LG N K P +++ L + + GG A++ G+
Sbjct: 3595 YGKVYASGYTESGRLGIG-PYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGE 3653
Query: 164 LYMWGNAKDSQLGV 177
+Y WG+ D +LG+
Sbjct: 3654 VYAWGDGDDGKLGL 3667
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 73/134 (54%), Gaps = 9/134 (6%)
Query: 35 KALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRI 93
+ + VP+ +V + +T++G++++WG N LG G + + P+ + + +
Sbjct: 488 QMMNVPMKSVDVYDETYLAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIV 547
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
+ ++ G A+T+DGK++ W G++ HS + P +++++++ V+ ++CG S
Sbjct: 548 VMVSCGKDFCAAVTEDGKLYMW-----GKILHS-SNCCYTPELVKSISEWHVSKVSCGSS 601
Query: 154 --TSAAVTEKGKLY 165
+ A++ +G ++
Sbjct: 602 INNTLALSREGYVF 615
Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V+ WG GQLG K P EAL I G + V+ +GK+++ G++
Sbjct: 2595 VYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVGGSKSLFIVSNEGKVFVCGDSS 2654
Query: 172 DSQLGVP 178
+LG+P
Sbjct: 2655 GGRLGIP 2661
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
ELYTWGR GRLG G P GL K L V A G T+ +TE
Sbjct: 572 ELYTWGRG-NYGRLGHGSSEDEVIPVLVAGL------KGLKVIDVACGSGDAQTLAVTEN 624
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 684
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 685 GDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF 743
Query: 178 PGLPVVQPCP 187
L V +P P
Sbjct: 744 DTLRVTKPEP 753
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3176 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3228
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3229 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 3288
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3289 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3327
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3024 GRLGLGLS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3078
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS A+T G++++WG G +G+LGH
Sbjct: 3079 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3138
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3139 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3188
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ V+ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4033 TLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESL 4092
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 4093 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 4152
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4153 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4182
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2962 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3014
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3015 VYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3074
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3075 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG 3134
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3121 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3173
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3174 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3233
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3234 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3292
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4115 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4167
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4168 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4227
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4228 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4286
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4170 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4222
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4223 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4282
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4283 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4319
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L II+IA +
Sbjct: 454 VTQIACAEKRFLILSRSGRVYTQAYNSD----------ALAPQLVQGLASRNIIKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 739 QCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFA 776
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
+ +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 497 IKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +P+++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4015
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4016 GAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4075
Query: 176 G 176
G
Sbjct: 4076 G 4076
Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
A T KVF WG QLG KVP E L+ V +A G + AVT +GK+
Sbjct: 2956 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3015
Query: 165 YMWGNAKDSQLGV 177
Y G A + +LG+
Sbjct: 3016 YACGEATNGRLGL 3028
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 99/167 (59%), Gaps = 5/167 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLG+G G + ++ ++ + + AVS GG + L+ EG +++WG + +L
Sbjct: 4057 GRLGIG---GTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKL 4113
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G G++V +PKL+ +L+ V I+ IA GG+HS A+T G +++WG G +G+LGH + +Q
Sbjct: 4114 GHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQ 4173
Query: 132 KVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
P V+EAL D V +ACG + + VT+ ++ WG+ +LG
Sbjct: 4174 LRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLG 4220
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 97/179 (54%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY G EG GRLGLG E + S+ + AV GG + LT++G+
Sbjct: 3065 KLYACG--EGTNGRLGLGDDNNMCEPKAIPFLSQ---FVIKKVAVHSGGKHALALTQDGK 3119
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG + +LG G+ + KPKL+ L RI IA G HS A+ +G++++WG G
Sbjct: 3120 VFSWGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGE 3179
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+G+LGH T Q P +++AL V +ACG + + A+T G +Y WG+ +LG
Sbjct: 3180 YGRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLG 3238
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 97/178 (54%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTM-VLTEEGQL 60
+Y WG ++ + LG +G + + K P+ +A GG T+ ++++EG+L
Sbjct: 3014 VYVWGLNDKDQ---LGGLKGSKIKLPVYSETLSKLKPIHIA----GGSKTLFIVSQEGKL 3066
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ G +N LG GD +PK +P L I ++A +GG H+LALT DGKVFSWG G
Sbjct: 3067 YACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEG 3126
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LGH + P +IE L + + IACG SAA+ G+LY WG + +LG
Sbjct: 3127 EDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLG 3184
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + + P V+AL V V+CG TM LT +
Sbjct: 3171 ELYTWGLGE-YGRLGHG------DTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTD 3223
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G + P L+ L ++ +IQ+ G SLALT G+V++WG
Sbjct: 3224 GYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGK 3283
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3284 GDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3342
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG G + G P V L + V V CG F++ LT+ G++
Sbjct: 3226 VYSWG-DGDFGKLGRGG------SDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEV 3278
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G+ KP L+ L +II +A G H LA+TD G+V++WG H
Sbjct: 3279 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDH 3338
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P ++ L D V ++CG S S A
Sbjct: 3339 GQQGNGTTSVNRKPSLVHDLEDARVNRVSCGSSHSIA 3375
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 7/191 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGR GRLG G ++ ++ + +K V A G T+ +T G +
Sbjct: 640 ELYTWGRG-NYGRLGHG---NFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIV 695
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG +LGRG G PK++ L+D+ ++++ G S ALT G+V++WG G
Sbjct: 696 FSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDA 755
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+LGH ++ + P VIE+L D V ++ G + A+TE +Y WG Q+
Sbjct: 756 YRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQIDPTLG 815
Query: 181 PVVQP---CPV 188
P++ CP
Sbjct: 816 PIISEPTLCPT 826
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT G +
Sbjct: 4208 VWSWG-DGDYGKLGRGG------SDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAV 4260
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L +II IA G H +A +D G+VF+WG
Sbjct: 4261 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDE 4320
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG T P ++ AL + +T +ACG + + A W AK +Q +P
Sbjct: 4321 GQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLA---------WSTAKATQSRMPA 4370
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P+ + A G + LT++G +++WG LG GD + +PKL+ L++ II IA
Sbjct: 567 PITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIA 626
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STS 155
G +S AL+ +G++++WG G +G+LGH + P ++ L V H+ACG S +
Sbjct: 627 CGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQT 686
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
VT G ++ WG+ +LG
Sbjct: 687 LCVTASGIVFSWGDGDYGKLG 707
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGG--FFTMVLTEE 57
LYTWG+ GR G LG G ++ P V+AL V V+CG T+ +T++
Sbjct: 4154 LYTWGK----GRYGRLGHGDSDDQLR----PKVVEALQDYKVIDVACGSGDAQTLCVTDD 4205
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4206 DNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGK 4265
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P + AL + + IA G A ++KG+++ WG+ + QLG
Sbjct: 4266 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4324
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G P V K L + V V CG F+ LT G++
Sbjct: 695 VFSWG-DGDYGKLGRGGTDGSK------TPKIVDKLLDINVVKVFCGSQFSAALTAHGEV 747
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG Y LG G PK++ +L D ++ ++ G H LALT+D V+ WG +
Sbjct: 748 YTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGWGRNDY 807
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ+ + P + L+ + V +A G + S A
Sbjct: 808 GQIDPTLGPIISEPTLCPTLSSKTVIGLASGPTQSFA 844
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 58 GQLWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
G ++ WG N +LG G +V P +L +R IQ+A G A+T DGK++S
Sbjct: 3994 GAIYGWGHNHRGQLGGLEGPKVK--LPAPCESLSALRPIQLAGGEQTLFAVTADGKIYST 4051
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDS 173
GYG G+LG T + +P ++E++ F+ +A GG A++ +G +Y WG D
Sbjct: 4052 GYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDG 4111
Query: 174 QLG 176
+LG
Sbjct: 4112 KLG 4114
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Query: 56 EEGQLWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
++ ++ WG N +LG +G ++ P L ++ I IA G ++ +GK++
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSKIK--LPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLY 3067
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAK 171
+ G G +G+LG N P I L+ + +A GG + A+T+ GK++ WG +
Sbjct: 3068 ACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGE 3127
Query: 172 DSQLG 176
D +LG
Sbjct: 3128 DGKLG 3132
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V+ WG QLG K+P+ E L+ HIA G T V+++GKLY G
Sbjct: 3014 VYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGT 3073
Query: 172 DSQLGV 177
+ +LG+
Sbjct: 3074 NGRLGL 3079
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 99/167 (59%), Gaps = 5/167 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLG+G G + ++ ++ + + AVS GG + L+ EG +++WG + +L
Sbjct: 4006 GRLGIG---GTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKL 4062
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G G+++ +PKL+ +L+ V II IA GG+HS A+T G +++WG G +G+LGH + +Q
Sbjct: 4063 GHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQ 4122
Query: 132 KVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
P V+EAL D V +ACG + + VT+ ++ WG+ +LG
Sbjct: 4123 LRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLG 4169
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY G EG GRLGLG E + S+ + AV GG + LT++G+
Sbjct: 3014 KLYACG--EGTNGRLGLGDDNNVCEPKPIPFLSQ---FVIKKVAVHSGGKHALALTQDGK 3068
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG + +LG G+ + KPKL+ L RI IA G HS A+ +G++++WG G
Sbjct: 3069 VFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGE 3128
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+G+LGH T Q P +++ L V +ACG + + A+T G +Y WG+ +LG
Sbjct: 3129 YGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLG 3187
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 99/178 (55%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTM-VLTEEGQL 60
+Y WG ++ + +LG G + SK+K P+ +A GG T+ ++++EG+L
Sbjct: 2963 VYVWGLNDKD-QLGGLKGSKIKLPVYSEVLSKLK--PIHIA----GGSKTLFIVSQEGKL 3015
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ G +N LG GD +PK +P L I ++A +GG H+LALT DGKVFSWG G
Sbjct: 3016 YACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEG 3075
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LGH + P +IE L + + IACG SAA+ G+LY WG + +LG
Sbjct: 3076 EDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLG 3133
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG G + G P V+ L + V V CG F++ LT+ G++
Sbjct: 3175 VYSWG-DGDFGKLGRGG------SDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEV 3227
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G+ KP L+ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3228 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3287
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P ++ L D V ++CG S S A
Sbjct: 3288 GQQGNGTTSVNRKPSLVHELEDARVNRVSCGSSHSIA 3324
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 95/179 (53%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELYTWG E GRLG G + + P V+ L V V+CG TM LT +
Sbjct: 3120 ELYTWGLGE-YGRLGHG------DTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTD 3172
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G + P ++ L + ++Q+ G SLALT G+V++WG
Sbjct: 3173 GCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGK 3232
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3233 GDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3291
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG +G GRLG G +E P ++AL + ++CG ++ L+ G+L
Sbjct: 530 VYSWGNGDG-GRLGHGDTVSYDE------PKLIEALLEKNIVFIACGSTYSAALSVSGEL 582
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G+ P L+ L ++ +A +G +L +T G VFSWG G
Sbjct: 583 YTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDG 642
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG T K P +++ L D V + CG SAA+T G++Y WG +LG
Sbjct: 643 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLG 700
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 10/172 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G + IP+ V L V V+CG T+ +T
Sbjct: 581 ELYTWGRG-NYGRLGHG------NFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTAS 633
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G PK++ L+D+ ++++ G S ALT G+V++WG
Sbjct: 634 GIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGK 693
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G +LGH ++ + P +IE+L D+ + ++ G + +TE +Y WG
Sbjct: 694 GDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGR 745
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT G +
Sbjct: 4157 VWSWG-DGDYGKLGRGG------SDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAV 4209
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L +II IA G H +A +D G+VF+WG
Sbjct: 4210 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDE 4269
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG T P ++ AL + +T +ACG + + A W AK +Q +P
Sbjct: 4270 GQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLA---------WSTAKATQSRMPA 4319
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGG--FFTMVLTEE 57
LYTWG+ GR G LG G ++ P V+AL V V+CG T+ +T++
Sbjct: 4103 LYTWGK----GRYGRLGHGDSDDQLR----PKVVEALQDYKVIDVACGSGDAQTLCVTDD 4154
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + +I++ G S+ALT G V++WG
Sbjct: 4155 DNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGK 4214
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P + AL + + IA G A ++KG+++ WG+ + QLG
Sbjct: 4215 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4273
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V + A G + LT++G +++WG LG GD V +PKL+ L++ I+ IA
Sbjct: 509 VTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIAC 568
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSA 156
G +S AL+ G++++WG G +G+LGH + +P ++ L V H+ACG S +
Sbjct: 569 GSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTL 628
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
VT G ++ WG+ +LG
Sbjct: 629 CVTASGIVFSWGDGDYGKLG 648
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G P V K L + V V CG F+ LT G++
Sbjct: 636 VFSWG-DGDYGKLGRGGTDGSK------TPKIVDKLLDINVVKVFCGSQFSAALTAHGEV 688
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG Y LG G PK++ +L D +I ++ G H L LT+D V+ WG +
Sbjct: 689 YTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDY 748
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ+ + P + L+ + V +A G + S A
Sbjct: 749 GQIDPTLGSVISEPTLCPTLSSKTVIGLASGPTQSFA 785
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 58 GQLWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
G ++ WG N +LG G +V P +L +R IQ+A G A+T DGKV+S
Sbjct: 3943 GAIYGWGHNHRGQLGGLEGPKVK--LPAPCESLSALRPIQLAGGEQTLFAVTADGKVYST 4000
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDS 173
GYG G+LG T + +P ++E++ F+ +A GG A++ +G +Y WG D
Sbjct: 4001 GYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDG 4060
Query: 174 QLG 176
+LG
Sbjct: 4061 KLG 4063
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+ V+ WG QLG K+P+ E L+ HIA G T V+++GKLY G
Sbjct: 2960 ESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACG 3019
Query: 169 NAKDSQLGV-PGLPVVQPCPV 188
+ +LG+ V +P P+
Sbjct: 3020 EGTNGRLGLGDDNNVCEPKPI 3040
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 97/176 (55%), Gaps = 10/176 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG D G+LG G G P+ + LP VA VS G ++ LT++G+++
Sbjct: 91 VWAWG-DNTNGQLGDG------TTTGRQTPTPAQGLP-SVAQVSAGESHSLALTDDGRVF 142
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNL-VDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG NS+ +LG G P + L D I +A GG HSLALT DG+VF+WG
Sbjct: 143 AWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTSDGRVFAWGKNSS 202
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG++ T + +P+ ++ L VT +A GG+ S A+T G++Y WG QLG
Sbjct: 203 GQLGNNSTVDSSIPVQVQGLPAN-VTAVAAGGNHSLALTSDGRIYAWGLNSSGQLG 257
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Query: 42 AAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY 101
AAVS GG ++VLT + +W WG N+N +LG G G P L V Q++ G
Sbjct: 73 AAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPSVA--QVSAGES 130
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA-DEFVTHIACGGSTSAAVTE 160
HSLALTDDG+VF+WG GQLG T + + P+ ++ LA D + +A GG+ S A+T
Sbjct: 131 HSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTS 190
Query: 161 KGKLYMWGNAKDSQLG 176
G+++ WG QLG
Sbjct: 191 DGRVFAWGKNSSGQLG 206
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 98/177 (55%), Gaps = 10/177 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LG N SIP +V+ LP V AV+ GG ++ LT +G++
Sbjct: 193 RVFAWGKNS-SGQLG------NNSTVDSSIPVQVQGLPANVTAVAAGGNHSLALTSDGRI 245
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL-VDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG NS+ +LG G P L+ L + + ++ G HSLAL DG V++WG
Sbjct: 246 YAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNS 305
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG+ T ++P+ + LA+ VT ++ GGS S A+T G +Y WG QLG
Sbjct: 306 YGQLGNGTTTASEMPVQVTGLAN--VTAVSAGGSDSLALTSDGYVYAWGLNSSGQLG 360
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 14/193 (7%)
Query: 1 ELYTWGRDEGEGRLGLGP---GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
++ WG + G+LG G R P + GL+ S +K V+ GG ++ LT +
Sbjct: 140 RVFAWGLNS-SGQLGDGTTADSRTPVQVQGLATDSTIKV-------VAAGGNHSLALTSD 191
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG NS+ +LG V P + L + +A GG HSLALT DG++++WG
Sbjct: 192 GRVFAWGKNSSGQLGNNSTVDSSIPVQVQGL-PANVTAVAAGGNHSLALTSDGRIYAWGL 250
Query: 118 GGHGQLGHSFTQNQKVPMVIEAL-ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG T N P+++ L A ++ G S A+ + G +Y WG QLG
Sbjct: 251 NSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQLG 310
Query: 177 VPGLPVVQPCPVE 189
G PV+
Sbjct: 311 -NGTTTASEMPVQ 322
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV---PVAAVSCGGFFTMVLTEE 57
+Y WG + G+LG G S P V LP PVA VS G ++ L ++
Sbjct: 244 RIYAWGLNS-SGQLGDG------TTSNSSTPVLVAGLPAGSKPVA-VSAGKDHSLALMQD 295
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG NS +LG G P + L +V ++ GG SLALT DG V++WG
Sbjct: 296 GTVYAWGGNSYGQLGNGTTTASEMPVQVTGLANV--TAVSAGGSDSLALTSDGYVYAWGL 353
Query: 118 GGHGQLGHSFTQNQKVPMVI 137
GQLG T N+ P+ +
Sbjct: 354 NSSGQLGDGTTSNRNTPVRV 373
>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 883
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 98/174 (56%), Gaps = 4/174 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGR GRLG G +EA + + + +K L V A G T+ +TE GQ+
Sbjct: 572 ELYTWGRG-NYGRLGHGSSE--DEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQV 627
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G +
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDN 687
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
+LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 688 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 96/178 (53%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G P E L K V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHG-DTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P ++E L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 634 DYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLG 691
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 83/144 (57%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV----RII 94
V +AA S G + + L G++++WG LG GD V +PKL+ R++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P V+ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 739 QCQHFDTLHATKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 789
Query: 180 LPVVQPCPV 188
VV C +
Sbjct: 790 PFVVDVCSM 798
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V+ ++C ++L+ G+++ +S+ P+L+ LV I++IA +
Sbjct: 454 VSQIACAEKRFLILSRSGRVYTQAYSSD----------ALAPQLVQGLVSRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P +I A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 88/140 (62%), Gaps = 3/140 (2%)
Query: 41 VAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIAN 98
+A +S G G ++ TEEG+++ WG N+ +LG G G P ++ NLV+ ++I++A
Sbjct: 116 IACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVAC 175
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAA 157
G +HS+ LT DG+V++WGY GQ+G T NQ +P V L ++ V +IACG S A
Sbjct: 176 GSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMA 235
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
V E G++Y+WG + QLG+
Sbjct: 236 VVENGEVYVWGYNGNGQLGL 255
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E+YTWG + G++G G IP +V + V ++CG +M + E G
Sbjct: 188 EVYTWGYNNS-GQVGSG------STANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENG 240
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G++++WG
Sbjct: 241 EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGAN 300
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D V AC TSAA T+ G++YMWG + + +
Sbjct: 301 SYGQLGTGNKSNQSYPTTVTVDKDRVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVVL 360
Query: 178 PGL 180
P L
Sbjct: 361 PHL 363
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 6/177 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+YTWG + +LG G G + + V V+CG +MVLT +G++
Sbjct: 135 EVYTWGHN-AYSQLG----NGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEV 189
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-IIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N++ ++G G P+ + + + + ++ IA G S+A+ ++G+V+ WGY G
Sbjct: 190 YTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNG 249
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG + NQ P I AL V +ACG + + +T++G++Y WG QLG
Sbjct: 250 NGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLG 306
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +TE +++ G N + LG GD +PK L +L +I ++ G G H + T++G
Sbjct: 75 LYVTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEG 134
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+V++WG+ + QLG+ T + VP + L ++ V +ACG S +T G++Y WG
Sbjct: 135 EVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGY 194
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 195 NNSGQVG-SGSTANQPIP 211
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 88/140 (62%), Gaps = 3/140 (2%)
Query: 41 VAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIAN 98
+A +S G G ++ TEEG+++ WG N+ +LG G G P ++ NLV+ ++I++A
Sbjct: 117 IACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVAC 176
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAA 157
G +HS+ LT DG+V++WGY GQ+G T NQ +P V L ++ V +IACG S A
Sbjct: 177 GSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMA 236
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
V E G++Y+WG + QLG+
Sbjct: 237 VVENGEVYVWGYNGNGQLGL 256
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E+YTWG + G++G G IP +V + V ++CG +M + E G
Sbjct: 189 EVYTWGYNNS-GQVGSG------STANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENG 241
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G++++WG
Sbjct: 242 EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGAN 301
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G++YMWG + + +
Sbjct: 302 SYGQLGTGNKSNQSYPTTVTVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVVL 361
Query: 178 PGL 180
P L
Sbjct: 362 PHL 364
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 6/177 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+YTWG + +LG G G + + V V+CG +MVLT +G++
Sbjct: 136 EVYTWGHN-AYSQLG----NGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEV 190
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-IIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N++ ++G G P+ + + + + ++ IA G S+A+ ++G+V+ WGY G
Sbjct: 191 YTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNG 250
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG + NQ P I AL V +ACG + + +T++G++Y WG QLG
Sbjct: 251 NGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLG 307
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +TE +++ G N + LG GD +PK L +L +I ++ G G H + T++G
Sbjct: 76 LYVTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEG 135
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+V++WG+ + QLG+ T + VP + L ++ V +ACG S +T G++Y WG
Sbjct: 136 EVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGY 195
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 196 NNSGQVG-SGSTANQPIP 212
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 5/188 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGR GRLG G +EA + + + +K L V A G T+ +TE GQ+
Sbjct: 572 ELYTWGRG-NYGRLGHGSSE--DEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQV 627
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG +LGRG G PKL+ L D+ +I++ G S+ALT DG+V+SWG G +
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDN 687
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+LGH ++ + P ++E L + V +A G + +TE +++ WG+ Q L
Sbjct: 688 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQ-HFDTL 746
Query: 181 PVVQPCPV 188
V +P P
Sbjct: 747 GVTKPEPT 754
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3175 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3227
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3287
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3288 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 98/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
++Y+ G + GRLGLG +G + IP ++ AL V AV GG LT +
Sbjct: 3013 KVYSCG-EATNGRLGLG-----MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3066
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG + +LG R+ KP+L+ L RI IA G HS LT G++++WG
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGL 3126
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQL 175
G +G+LGH Q P +++ L V +ACG + + A+T++G ++ WG+ +L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 176 G 176
G
Sbjct: 3187 G 3187
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4036 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4095
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V IACG
Sbjct: 4096 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSG 4155
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4156 DAQTLCLTDDDTVWSWGDGDYGKLG 4180
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3120 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3233 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4113 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4165
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4166 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4225
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4226 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4284
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4168 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4220
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4280
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4281 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V V+C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H L LT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P L + + IACG + S A
Sbjct: 739 QCQHFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFA 776
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4073
Query: 176 G 176
G
Sbjct: 4074 G 4074
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 55 TEEGQLWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
T +++ WG N +LG +G ++ P L + ++Q+A G A+T +GKV
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3014
Query: 113 FSWGYGGHGQLGHSFTQ-NQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGN 169
+S G +G+LG + +P I AL+ V +A GG + A+T GK++ WG
Sbjct: 3015 YSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGE 3074
Query: 170 AKDSQLG 176
D +LG
Sbjct: 3075 GDDGKLG 3081
Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2944 LIRKKTPGLESTA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3003 KSLFAVTVEGKVYSCGEATNGRLGL 3027
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 97/170 (57%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG G +S+P ++ +L + AV GG ++ LT +G++++WG +
Sbjct: 3527 GRLGLGIT-----TGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDD 3581
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R KP+L+ L R+ IA G HS A+T +G +++WG G +G+LGH
Sbjct: 3582 GKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDN 3641
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P ++ALA E V +ACG + + A+T++GK+Y WG+ +LG
Sbjct: 3642 TTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLG 3691
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGF--FTMVLTEE 57
+LYTWG E GRLG G + P +VKAL V V+CG T+ LT+E
Sbjct: 3624 DLYTWGLGE-YGRLGHGDNTTQLK------PKQVKALAHERVVQVACGSRDAQTLALTDE 3676
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG +LGRG G P + L D ++ QI G SLALT G+V++WG
Sbjct: 3677 GKVYSWGDGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGK 3736
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + + H+A G AVT+ G+++ WG+ Q G
Sbjct: 3737 GDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQG 3795
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG +G G+LG G + E P+ + L VA + CG +++ LT G+
Sbjct: 639 EVFSWGNGDG-GKLGHGDYQNHEE------PALITGLSGKQVAKICCGSSYSVALTSNGE 691
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGY 117
+++WG + LG G P LL RI+ +A +G +LA+TD G V+SWG
Sbjct: 692 VYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGD 751
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +G+LG K P VIE L + V + CG S A+T+ G +Y WG + +LG
Sbjct: 752 GDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLG 810
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 84/158 (53%), Gaps = 9/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG D G+LG G G N +P +V L V + CG F++ LT+ GQ
Sbjct: 3678 KVYSWG-DGDFGKLGRGGSEGCN------VPHEVDRLRDQKVCQIECGAQFSLALTKSGQ 3730
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W WG + LG G KP+++ L +I+ +A G H LA+TD G+VF+WG
Sbjct: 3731 VWTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDND 3790
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
HGQ G+ T + P ++ L ++ +ACG S S A
Sbjct: 3791 HGQQGNGTTTVNRKPALV-VLEGYKISKVACGSSHSIA 3827
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 8/152 (5%)
Query: 33 KVKALPVPVAAVSC-----GGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLP 86
K+ L ++A+ C G +T+EG+++ G +N LG G G P+ +
Sbjct: 3486 KLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEATNGRLGLGITTGTVSVPRQIT 3545
Query: 87 NLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF 144
+L I ++A +GG HSLALT DGKVFSWG G G+LGH N P +IEAL +
Sbjct: 3546 SLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKR 3605
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V IACG S SAA+T G LY WG + +LG
Sbjct: 3606 VRDIACGSSHSAAITSNGDLYTWGLGEYGRLG 3637
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG+ GRLG G L K + A G T+ +T+ G +
Sbjct: 691 EVYSWGKGNF-GRLGHGSSEDQTTPMLLKF---FKGHRIVDVACGSGDAQTLAVTDSGAV 746
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG +LGRG G PK++ L+ ++++ G S+ALT G V++WG G +
Sbjct: 747 YSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDN 806
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+LGH + + P IEAL+ + V IA G A+TE G+LY WG + QLG P +
Sbjct: 807 YRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPSI 866
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 93/155 (60%), Gaps = 5/155 (3%)
Query: 27 GLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+S P++++++ + AV+ GG + L+ EG++++WG + +LG G+R +P+
Sbjct: 4533 SVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPR 4592
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
++ +L ++ IA GG HS +T +G++++WG G +G+LGH +++Q P ++EAL
Sbjct: 4593 VIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSY 4652
Query: 144 FVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
V +ACG + + +T+ ++ WG+ +LG
Sbjct: 4653 RVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4687
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
ELYTWG+ GR G LG G ++ P V+AL V ++CG T+ +T+
Sbjct: 4620 ELYTWGK----GRYGRLGHGDSEDQPR----PKLVEALKSYRVVDMACGSGDAQTLCITD 4671
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + L ++++ G S+ALT G V++WG
Sbjct: 4672 DDNVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWG 4731
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P + AL ++ V +ACG A T+ G+++ WG+ + QLG
Sbjct: 4732 KGDYHRLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLG 4791
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K++ L V V CG F++ LT+ G +
Sbjct: 4675 VWSWG-DGDYGKLGRGG------SDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSV 4727
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L + ++I +A G H +A TD G+VFSWG
Sbjct: 4728 YTWGKGDYHRLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDE 4787
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ +L + + +ACG + S A
Sbjct: 4788 GQLGDGTTNAIQRPRLVASLLGKKINRVACGSAHSLA 4824
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 8/163 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG RG N+ G P ++ L V V CG F+M LT+ G +
Sbjct: 746 VYSWG-DGDYGKLG----RGGND--GCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAV 798
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG NY LG G PK + L ++ IA G H +A+T+DG+++ WG
Sbjct: 799 YTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQ 858
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
GQLG+ N P +I + + + +ACG + + A T G+
Sbjct: 859 GQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFAWTSGGQ 901
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 76/131 (58%), Gaps = 2/131 (1%)
Query: 48 GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G M LT +G++++WG +LG GD +P L+ L ++ +I G +S+ALT
Sbjct: 628 GKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALT 687
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLY 165
+G+V+SWG G G+LGH +++Q PM+++ + +ACG + + AVT+ G +Y
Sbjct: 688 SNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVY 747
Query: 166 MWGNAKDSQLG 176
WG+ +LG
Sbjct: 748 SWGDGDYGKLG 758
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 90 DVRIIQIAN--GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
D +I+IA+ G H + LT DG+VFSWG G G+LGH QN + P +I L+ + V
Sbjct: 616 DREVIRIASHPDGKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAK 675
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
I CG S S A+T G++Y WG +LG
Sbjct: 676 ICCGSSYSVALTSNGEVYSWGKGNFGRLG 704
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 73/173 (42%), Gaps = 54/173 (31%)
Query: 58 GQLWNWGANSNYELGRGD--------------------RVGGWK---------------- 81
GQ+W WG N +LG D VGG +
Sbjct: 4461 GQIWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFATGY 4520
Query: 82 ----------------PKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGGHGQL 123
P L ++ V I ++A +GG H LAL+ +G+V+SWG G G+L
Sbjct: 4521 GAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKL 4580
Query: 124 GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GH P VI++L + V IA GG+ SA +T G+LY WG + +LG
Sbjct: 4581 GHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLG 4633
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 57 EGQLWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
+ ++ WG N +LG +G ++ P L NL +R +QI G +T +GKV++
Sbjct: 3463 QTNVFCWGLNDKDQLGGPKGSKIK--LPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYA 3520
Query: 115 WGYGGHGQLGHSFTQ-NQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAK 171
G +G+LG T VP I +L+ + +A GG S A+T GK++ WG
Sbjct: 3521 CGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGD 3580
Query: 172 DSQLG 176
D +LG
Sbjct: 3581 DGKLG 3585
Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
VF WG QLG K+P + + L+ I G + VT++GK+Y G A
Sbjct: 3466 VFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEAT 3525
Query: 172 DSQLGV 177
+ +LG+
Sbjct: 3526 NGRLGL 3531
>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470703|gb|EAL68677.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 849
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 6/152 (3%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+IP +++ +P V VS G F+ +T+ G+L+ WG N +LG G+R P+L+ L
Sbjct: 202 TIPMQIQDIPEEVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQLVKTL 261
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH----SFTQNQKVPMVIEALADEF 144
+DV I+ + G H A+TD G+V+SWG G GQLGH S+ +K+ +E +E
Sbjct: 262 IDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVE--LNER 319
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ +ACG + + + +G LY +G+ + QLG
Sbjct: 320 IAQVACGSNFTMVRSVQGLLYAFGHGEYGQLG 351
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 22/191 (11%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
LYTWG +E +G+LGLG S P VK L V + +V CG +T++G++
Sbjct: 233 LYTWGFNE-KGQLGLG------NRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEV 285
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDV--RIIQIANGGYHSLALTDDGKVFSWGYG 118
++WG +LG G+ PK + V++ RI Q+A G ++ + G ++++G+G
Sbjct: 286 YSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAFGHG 345
Query: 119 GHGQLGHSFTQNQ------------KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
+GQLG + +P+V+++L + + ++ACG + VT++ ++Y
Sbjct: 346 EYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVTDENEVYQ 405
Query: 167 WGNAKDSQLGV 177
WG LG+
Sbjct: 406 WGWGSSGALGL 416
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 26/198 (13%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG-PNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEG 58
++Y+WGR + EG+LG+G G G ++ ++ P+ +K+L + V+CG F ++ LT+ G
Sbjct: 54 DVYSWGRSK-EGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMG 112
Query: 59 QLWNWGA-----NSNYELGRGDRVGGWKPKLLPNLVDVRIIQI--------------ANG 99
+++ WG S L G + +P L RII+ ANG
Sbjct: 113 KVYEWGQLHRLDESQSSLDIQSTNGLIE---MPRLSSQRIIEASVSQYLSGEKKAYDANG 169
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
G +D + + LG NQ +PM I+ + +E V ++ G + SAAVT
Sbjct: 170 GTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPEE-VVDVSGGWAFSAAVT 228
Query: 160 EKGKLYMWGNAKDSQLGV 177
+ G+LY WG + QLG+
Sbjct: 229 KSGRLYTWGFNEKGQLGL 246
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 64 GANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL 123
G + N +LG +P ++ L+ RIIQ +G HSLA++ G V+SWG GQL
Sbjct: 7 GQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSKEGQL 66
Query: 124 --GHSFTQNQKV-----PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G + + KV P +I++L E + +ACG S A+T+ GK+Y WG
Sbjct: 67 GIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWG 118
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA---LPVPVAAVSCGGFFTMVLTEE 57
E+Y+WG LG+ G P K++ L +A V+CG FTMV + +
Sbjct: 284 EVYSWG-------LGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQ 336
Query: 58 GQLWNWGANSNYELGR---------GDRVGGWK---PKLLPNLVDVRIIQIANGGYHSLA 105
G L+ +G +LG G R +K P ++ +L +I +A G H++
Sbjct: 337 GLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIV 396
Query: 106 LTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
+TD+ +V+ WG+G G LG + Q VP +I +L+ E + I G
Sbjct: 397 VTDENEVYQWGWGSSGALGLGNKRFQLVPQLITSLSGEEIASITAG 442
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGG-------WKPKLLPNLVDVRIIQIANGGYHS 103
++ ++ G +++WG + +LG G GG KP L+ +L RII++A G +HS
Sbjct: 46 SLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHS 105
Query: 104 LALTDDGKVFSWG 116
LALTD GKV+ WG
Sbjct: 106 LALTDMGKVYEWG 118
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V S G +GQLGH + P VIE L + + G + S AV+ G +Y WG +K
Sbjct: 3 VLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSK 62
Query: 172 DSQLGV 177
+ QLG+
Sbjct: 63 EGQLGI 68
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGG------LSIPSKVKALPVP-VAAVSCGGFFTMVL 54
LY +G E G+LG + GG SIP VK+L + V+CG T+V+
Sbjct: 339 LYAFGHGE-YGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVV 397
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL-TDDGKVF 113
T+E +++ WG S+ LG G++ P+L+ +L I I G H++ + D F
Sbjct: 398 TDENEVYQWGWGSSGALGLGNKRFQLVPQLITSLSGEEIASITAGEKHTIVVRCSDVTSF 457
Query: 114 SWGY 117
++ Y
Sbjct: 458 AYDY 461
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 93/176 (52%), Gaps = 7/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
LYTWG D+ G G G G P ++ L V +S GF T LT+ G++
Sbjct: 132 LYTWG-DKENGVAGHGDTEGHQYT-----PKLLERLSGKRVVQLSACGFHTGCLTDAGEV 185
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG LG G P+L+ L+ R +QI+ GG+HS +T DGK++++G G H
Sbjct: 186 YTWGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEH 245
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLGH N+ P +++ L F+T I CG S S A+T ++Y WGN +LG
Sbjct: 246 GQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLG 301
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 91/163 (55%), Gaps = 12/163 (7%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEE 57
E+YTWG EG+ GRLG G R + P V+ L PV +SCGGF + V+T +
Sbjct: 184 EVYTWG--EGKFGRLGHGAERNCHS------PRLVETLLGKRPVQ-ISCGGFHSAVVTAD 234
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ +G + +LG GD+V KP L+ +L V + QI G HS+ALT +V++WG
Sbjct: 235 GKMYTFGGGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGN 294
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
G HG+LGH + P ++E L + V +A +A + E
Sbjct: 295 GDHGKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHTACLVE 337
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 95/177 (53%), Gaps = 9/177 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAA-VSCGGFFTMVLTEEGQL 60
+YTWGR + +GRLG G + G +P +L V V+CG + T ++ +G L
Sbjct: 28 VYTWGRGD-DGRLGHG------DNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNL 80
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG +LG G+ G PK + +LV + ++ IA G H+ +T G +++WG +
Sbjct: 81 FTWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKEN 140
Query: 121 GQLGHSFTQ-NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G GH T+ +Q P ++E L+ + V ++ G + +T+ G++Y WG K +LG
Sbjct: 141 GVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLG 197
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 7/127 (5%)
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
T G ++ WG + LG GD GWK P+L +L I + G YH+ A++ G +
Sbjct: 23 THGGGVYTWGRGDDGRLGHGD--NGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNL 80
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
F+WG G +G+LGH P +++L V IACG +A VT +G LY WG D
Sbjct: 81 FTWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWG---D 137
Query: 173 SQLGVPG 179
+ GV G
Sbjct: 138 KENGVAG 144
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 103/192 (53%), Gaps = 13/192 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
ELYTWGR G G LG G +EA IP V L + V V+CG T+ +TE
Sbjct: 482 ELYTWGR----GNYGRLGHGSSEDEA----IPMLVAGLKGLKVIDVACGSGDAQTLAVTE 533
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
GQ+W+WG +LGRG G PKL+ L D+ +I++ G S+ALT DG+V+SWG
Sbjct: 534 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 593
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH ++ + P ++E L + V +A G + +TE +++ WG+ Q
Sbjct: 594 KGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQ-H 652
Query: 177 VPGLPVVQPCPV 188
L V +P P
Sbjct: 653 FDTLGVTKPEPT 664
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3085 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3137
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3138 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3197
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P +++ L + +T +ACG S S A
Sbjct: 3198 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3234
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 426 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 483
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 484 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 543
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 544 DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 601
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 98/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
++Y+ G + GRLGLG +G + IP ++ AL V AV GG LT +
Sbjct: 2923 KVYSCG-EATNGRLGLG-----MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 2976
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG + +LG R+ KP+L+ L RI IA G HS LT G++++WG
Sbjct: 2977 GKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGL 3036
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQL 175
G +G+LGH Q P +++ L V +ACG + + A+T++G ++ WG+ +L
Sbjct: 3037 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3096
Query: 176 G 176
G
Sbjct: 3097 G 3097
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 3941 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4000
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 4001 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDI 4060
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4061 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4090
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3030 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3082
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3083 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3142
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3143 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3201
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4023 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4075
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4076 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4135
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4136 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4194
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4078 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4130
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4131 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4190
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4191 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4227
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V V+C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 364 VMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQLVQGLASRNIVKIAAHS 413
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 414 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 473
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 474 SAAITAEGELYTWGRGNYGRLG 495
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 407 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 465
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 466 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 525
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 526 AQTLAVTENGQVWSWGDGDYGKLG 549
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 536 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ 588
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H L LT+D +V SWG
Sbjct: 589 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSND 648
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P L + + IACG + S A
Sbjct: 649 QCQHFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFA 686
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3864 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3923
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3924 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 3983
Query: 176 G 176
G
Sbjct: 3984 G 3984
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 55 TEEGQLWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
T +++ WG N +LG +G ++ P L + ++Q+A G A+T +GKV
Sbjct: 2867 TIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2924
Query: 113 FSWGYGGHGQLGHSFTQ-NQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGN 169
+S G +G+LG + +P I AL+ V +A GG + A+T GK++ WG
Sbjct: 2925 YSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGE 2984
Query: 170 AKDSQLG 176
D +LG
Sbjct: 2985 GDDGKLG 2991
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2854 LIRKKTPGLESTA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2912
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 2913 KSLFAVTVEGKVYSCGEATNGRLGL 2937
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y WG + G+LGLG P + P VK L +P++ +SCG F+ +T G
Sbjct: 157 EIYCWGSN-SHGQLGLGSSGTPE-----TKPCLVKLLQGIPISHISCGADFSFAVTPSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG NS +LG GD +P L +L R+ I G H+ ALT DG VF++G G
Sbjct: 211 VYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGM 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH + N+ +P + L VT I CG T A V KG++Y +G QLG
Sbjct: 271 YGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLG 328
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 11/167 (6%)
Query: 21 GPNEAGGL-SIPSKVKALPVP------VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR 73
G N+ G L S+ +A PV + V+CG T+ E G+++ WG+NSN +LG
Sbjct: 59 GLNDYGQLGHCRSRTRAEPVDGLEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGL 118
Query: 74 GDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ--LGHSFTQN 130
PK++ +L +++QIA G HS+ALT+ G+++ WG HGQ LG S T
Sbjct: 119 NVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPE 178
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
K P +++ L ++HI+CG S AVT G +Y WG QLG+
Sbjct: 179 TK-PCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWGKNSFGQLGL 224
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 86/152 (56%), Gaps = 5/152 (3%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
+ V CG T+++ ++G+L+++G N +LG +P + L I Q+A G
Sbjct: 36 IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP--VDGLEAHNITQVACGA 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK-VPMVIEALADEFVTHIACGGSTSAAVT 159
H+LA + G+VF+WG +GQLG + ++ P ++++LA + V IACG S S A+T
Sbjct: 94 QHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALT 153
Query: 160 EKGKLYMWGNAKDSQLGV--PGLPVVQPCPVE 189
G++Y WG+ QLG+ G P +PC V+
Sbjct: 154 NVGEIYCWGSNSHGQLGLGSSGTPETKPCLVK 185
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
P+ P + I+Q+ G H++ + DGK+FS+G +GQLGH ++ + P ++ L
Sbjct: 25 PRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP--VDGLE 82
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
+T +ACG + A E G+++ WG+ + QLG+ + P P
Sbjct: 83 AHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTP 128
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 97/172 (56%), Gaps = 10/172 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G + P V AL + V V+CG T+ +TE
Sbjct: 534 ELYTWGRG-NYGRLGHGSSEDQ------TTPMLVTALKGLKVVDVACGSGDAQTLAVTEN 586
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ I+++ G S+ALT DG+V++WG
Sbjct: 587 GQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGK 646
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G + +LGH ++ + P +++ L + V +A G + A+T+ G+++ WG+
Sbjct: 647 GDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGS 698
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
++Y G + GRLGLG +G + IP ++ AL V AV GG M LT +
Sbjct: 2783 KIYACG-EATNGRLGLGLS-----SGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVD 2836
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG + +LG R+ KP+L+ L RI IA G HS A+T G+++SWG
Sbjct: 2837 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGL 2896
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQL 175
G +G+LGH Q P +++ L V +ACG + + A+T++G ++ WG+ +L
Sbjct: 2897 GEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 2956
Query: 176 G 176
G
Sbjct: 2957 G 2957
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 2945 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2997
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 2998 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3057
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3058 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3096
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 14/183 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-----VPVAAVSCGGFFTMVLT 55
E+++WG +G GRLG G + L P+ + A V ++CG ++ +T
Sbjct: 478 EVFSWGCGDG-GRLGHG------DTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAAIT 530
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVF 113
+G+L+ WG + LG G P L+ L ++++ +A +G +LA+T++G+V+
Sbjct: 531 VDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVW 590
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
SWG G +G+LG + K P ++E L D + + CG S A+T+ G++Y WG +
Sbjct: 591 SWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQ 650
Query: 174 QLG 176
+LG
Sbjct: 651 RLG 653
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2731 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2783
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L + V+ + + +GG H++ALT DGKVFSWG
Sbjct: 2784 IYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 2843
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 2844 EGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLG 2903
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 3834 TLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 3893
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
V ++ IA GG HS +T G++F+WG G +G+LGH +++Q P +++AL V +
Sbjct: 3894 RGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDV 3953
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 3954 ACGSGDAQTLCLTDDDMVWSWGDGDYGKLG 3983
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P V+ L + + V CG F++ LT++GQ
Sbjct: 588 QVWSWG-DGDYGKLGRGG------SDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQ 640
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N LG G PKLL L +++ +A G H LALTDDG+V SWG
Sbjct: 641 VYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSND 700
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + N+K P + L + + I+CG G+ + W + + +G+
Sbjct: 701 KLQHFDTLFSNKKQPKALPGLNSKHIVGISCG---------PGQSFAWSSCSEWSVGLRV 751
Query: 180 LPVVQPCPV 188
VV CP+
Sbjct: 752 PFVVDVCPM 760
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELY+WG E GRLG G P VK L V V+CG T+ LT+E
Sbjct: 2890 ELYSWGLGE-YGRLGHGDNTTQLR------PKLVKVLLGHRVIQVACGSRDAQTLALTDE 2942
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 2943 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3002
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3003 GDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3061
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRIIQIANGGYHSLALT 107
+ L+ G++++WG LG GD +P ++ ++ IA G +S A+T
Sbjct: 471 LALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAAIT 530
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLY 165
DG++++WG G +G+LGH +++Q PM++ AL V +ACG + + AVTE G+++
Sbjct: 531 VDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVW 590
Query: 166 MWGNAKDSQLG 176
WG+ +LG
Sbjct: 591 SWGDGDYGKLG 601
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 29/197 (14%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
EL+TWG+ GR G LG G ++ P V AL V V+CG T+ LT+
Sbjct: 3916 ELFTWGK----GRYGRLGHGDSEDQLK----PKLVDALQGHRVIDVACGSGDAQTLCLTD 3967
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + +I++ G S+ALT G V++WG
Sbjct: 3968 DDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWG 4027
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL------------ 164
G + +LGH + + P ++ L + V IA G TE G++
Sbjct: 4028 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSL 4087
Query: 165 -----YMWGNAKDSQLG 176
Y WG+ + QLG
Sbjct: 4088 GLGEVYTWGDNDEGQLG 4104
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P+ ++S G +V +E+G L + + Y + + P L+ +L +++++A
Sbjct: 405 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYT--QNYKSTTLAPMLIHSLSSRKMVKLA 462
Query: 98 N--GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACG 151
G H LAL+ +G+VFSWG G G+LGH T + P +I A A + V HIACG
Sbjct: 463 AHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACG 522
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLG 176
+ SAA+T G+LY WG +LG
Sbjct: 523 STYSAAITVDGELYTWGRGNYGRLG 547
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G P K+ +L + V V CG F++ LT+ G +
Sbjct: 3971 VWSWG-DGDYGKLGRGG------SDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAV 4023
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK--------- 111
+ WG + LG G +P+ + L ++I IA G H + T+DG+
Sbjct: 4024 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLP 4083
Query: 112 --------VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-----TSAAV 158
V++WG GQLG T + P ++ AL + + +ACG + +++
Sbjct: 4084 RWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLSWSTSKP 4143
Query: 159 TEKGKL 164
T GKL
Sbjct: 4144 TNAGKL 4149
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3757 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3816
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3817 GAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 3876
Query: 176 G 176
G
Sbjct: 3877 G 3877
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
KVF WG QLG KVP E L+ V +A G + AVT +GK+Y G A
Sbjct: 2731 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEA 2790
Query: 171 KDSQLGV 177
+ +LG+
Sbjct: 2791 TNGRLGL 2797
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu
rubripes]
Length = 4822
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 97/172 (56%), Gaps = 10/172 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G + P V AL + V V+CG T+ +TE
Sbjct: 557 ELYTWGRG-NYGRLGHGSSEDQ------TTPMLVTALKGLKVVDVACGSGDAQTLAVTEN 609
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W+WG +LGRG G PKL+ L D+ I+++ G S+ALT DG+V++WG
Sbjct: 610 GQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGK 669
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G + +LGH ++ + P +++ L + V +A G + A+T+ G+++ WG+
Sbjct: 670 GDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGS 721
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
++Y G + GRLGLG +G + IP ++ AL V AV GG M LT +
Sbjct: 2998 KIYACG-EATNGRLGLGLS-----SGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVD 3051
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG + +LG R+ KP+L+ L RI IA G HS A+T G+++SWG
Sbjct: 3052 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGL 3111
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQL 175
G +G+LGH Q P +++ L V +ACG + + A+T++G ++ WG+ +L
Sbjct: 3112 GEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3171
Query: 176 G 176
G
Sbjct: 3172 G 3172
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3160 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3212
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3213 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3272
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P +++ L + +T +ACG S S A
Sbjct: 3273 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3309
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 100/183 (54%), Gaps = 14/183 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-----VPVAAVSCGGFFTMVLT 55
E+++WG +G GRLG G +A L P+ + A V ++CG ++ V+T
Sbjct: 501 EVFSWGCGDG-GRLGHG------DATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVIT 553
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVF 113
+G+L+ WG + LG G P L+ L ++++ +A +G +LA+T++G+V+
Sbjct: 554 IDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVW 613
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
SWG G +G+LG + K P ++E L D + + CG S A+T+ G++Y WG +
Sbjct: 614 SWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQ 673
Query: 174 QLG 176
+LG
Sbjct: 674 RLG 676
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2946 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2998
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L + V+ + + +GG H++ALT DGKVFSWG
Sbjct: 2999 IYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 3058
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3059 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLG 3118
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L V ++ IA GG H
Sbjct: 4031 AVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAH 4090
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S +T G++F+WG G +G+LGH +++Q P +++AL V +ACG + + +T+
Sbjct: 4091 SACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTD 4150
Query: 161 KGKLYMWGNAKDSQLG 176
++ WG+ +LG
Sbjct: 4151 DDMVWSWGDGDYGKLG 4166
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELY+WG E GRLG G + A L P VK L V V+CG T+ LT+E
Sbjct: 3105 ELYSWGLGE-YGRLGHG-----DNATQLR-PKLVKVLLGHRVIQVACGSRDAQTLALTDE 3157
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3158 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3217
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3218 GDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3276
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
EL+TWG+ GR G LG G ++ P V AL V V+CG T+ LT+
Sbjct: 4099 ELFTWGK----GRYGRLGHGDSEDQLK----PKLVDALQGHRVIDVACGSGDAQTLCLTD 4150
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + + ++ G S+ALT G V++WG
Sbjct: 4151 DDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWG 4210
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4211 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4270
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G IP K+ +L + V V CG F++ LT+ G +
Sbjct: 4154 VWSWG-DGDYGKLGRGG------SDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAV 4206
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4207 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4266
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + + +ACG + + A
Sbjct: 4267 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4303
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 6/131 (4%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRIIQIANGGYHSLALT 107
+ L+ G++++WG LG GD +P ++ ++ IA G +S +T
Sbjct: 494 LALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVIT 553
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLY 165
DG++++WG G +G+LGH +++Q PM++ AL V +ACG + + AVTE G+++
Sbjct: 554 IDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVW 613
Query: 166 MWGNAKDSQLG 176
WG+ +LG
Sbjct: 614 SWGDGDYGKLG 624
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P+ ++S G +V +E+G L + + Y + + P L+ +L +I+++A
Sbjct: 428 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVY--TQNYKSTTLAPMLIHSLSSRKIVKLA 485
Query: 98 N--GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACG 151
G H LAL+ +G+VFSWG G G+LGH + P +I A A + V HIACG
Sbjct: 486 AHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACG 545
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLG 176
+ SA +T G+LY WG +LG
Sbjct: 546 STYSAVITIDGELYTWGRGNYGRLG 570
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3940 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3999
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4000 GAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4059
Query: 176 G 176
G
Sbjct: 4060 G 4060
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
KVF WG QLG KVP E L+ V +A G + AVT +GK+Y G A
Sbjct: 2946 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEA 3005
Query: 171 KDSQLGV 177
+ +LG+
Sbjct: 3006 TNGRLGL 3012
>gi|224496032|ref|NP_001139103.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
Length = 992
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 17/195 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L+ WG + G+LGL E G P +++L +PVA +S GG + VL+ G
Sbjct: 135 QLFVWGENT-HGQLGL-----RKEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGV 188
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG+NS +LG GD + P ++ +L + + I+ GG H+ L+ G VF++G GG
Sbjct: 189 VFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGG 248
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLG-- 176
GQLGH+ +++ P +I L V+ + CG + E KL Y +G QLG
Sbjct: 249 FGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNG 308
Query: 177 ------VPGLPVVQP 185
VP LPV+ P
Sbjct: 309 EQVKQSVP-LPVLLP 322
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/137 (35%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNLVDVRIIQIANG 99
V ++CG +M L+ +GQL+ WG N++ +LG R ++ G P+ L +L ++ + QI+ G
Sbjct: 117 VIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAG 176
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
G HS L+ G VF WG GQLG T+++ VP ++++L + I+CGG +A ++
Sbjct: 177 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLS 236
Query: 160 EKGKLYMWGNAKDSQLG 176
+ G ++ +G+ QLG
Sbjct: 237 KGGTVFTFGSGGFGQLG 253
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ-NQKVPMVIEALADE 143
L +L + ++IQIA G HS+AL++DG++F WG HGQLG Q + P +++L +
Sbjct: 109 LKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEI 168
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V I+ GG+ S ++ G ++ WG+ QLG+
Sbjct: 169 PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGL 202
>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
Length = 538
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 99/178 (55%), Gaps = 7/178 (3%)
Query: 14 LGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR 73
LG+G + E + I K K + + + G +V T+ G L++WG N +LG
Sbjct: 61 LGVGDAQSGLEPRKIDILCKKKIVDIGYGS----GPHVLVCTDNGDLYSWGHNGYSQLGN 116
Query: 74 GDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
G G P+L+ NL+ +++++A G +HSLALT +G+VF+WGY GQ+G T NQ
Sbjct: 117 GSTNQGLSPQLITTNLIGRKVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQA 176
Query: 133 VPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
P + A L VT IACG ++S A+ + G++Y WG + QLGV G V QP P
Sbjct: 177 TPRKVAACLGTRKVTEIACGQTSSMALLDNGEVYGWGYNGNGQLGV-GNNVNQPNPCR 233
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 18/185 (9%)
Query: 1 ELYTWGRDE-GEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEE 57
E++ WG + G+ +G G N+A P KV A V ++CG +M L +
Sbjct: 155 EVFAWGYNNCGQ----VGSGTTTNQA----TPRKVAACLGTRKVTEIACGQTSSMALLDN 206
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ V P + L + ++QI G H++ALTD+G V++WG
Sbjct: 207 GEVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIVVQIVCGYAHAMALTDEGSVYAWGA 266
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFV----THIACGGSTSAAVTEKGKLYMWGNAKDS 173
+GQLG N P I FV TH S+A+T+ GK+YMWG +
Sbjct: 267 NSYGQLGTGNKANLVTPTKIALDKGRFVEIGATHY---NHVSSAITQTGKVYMWGQCRGQ 323
Query: 174 QLGVP 178
+ P
Sbjct: 324 SITSP 328
>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1 [Ciona
intestinalis]
Length = 554
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 7/190 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y+ G + G LG+G E L S K + + + G +VLT++G +
Sbjct: 66 KVYSLGTNTS-GCLGVGDNSSSLEPRLLESFSGQKIISLSAGS----GPHVLVLTQDGGV 120
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG NS +LG G G P LL + +++QIA G +HS+ALT +G+V++WGY
Sbjct: 121 YSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTEGEVYTWGYNNC 180
Query: 121 GQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV-P 178
GQ+G T NQ P + A + ++ + I CG +TS VT+ G++Y WG + QLGV
Sbjct: 181 GQIGSGSTANQGSPRKVTACIGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQLGVGN 240
Query: 179 GLPVVQPCPV 188
+ PC V
Sbjct: 241 NVNQTNPCRV 250
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 1 ELYTWGRDE-GEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEE 57
E+YTWG + G+ +G G N+ P KV A + ++CG ++ +T+
Sbjct: 171 EVYTWGYNNCGQ----IGSGSTANQGS----PRKVTACIGNKRIIDITCGQTTSLCVTDS 222
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG N N +LG G+ V P + L V I Q+ G H+LALTD+G VF WG
Sbjct: 223 GEVYSWGYNGNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGA 282
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKD 172
+GQLG N P+ + V A S +SAA + G +YMWG +
Sbjct: 283 NSYGQLGSGNKANTCTPLQVATRIGRVVCLAATHYSHSSAARNQSGHIYMWGQLRQ 338
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ T + ++++ G N++ LG GD +P+LL + +II ++ G G H L LT DG
Sbjct: 59 IFTTLDEKVYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDG 118
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
V+SWG+ + QLG+ T P ++ V IACG S A+T +G++Y WG
Sbjct: 119 GVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTEGEVYTWGYN 178
Query: 171 KDSQLG 176
Q+G
Sbjct: 179 NCGQIG 184
>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
magnipapillata]
Length = 2284
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 91/161 (56%), Gaps = 8/161 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG RG +E IP +V+ L + + + CG FT+ LT+ G
Sbjct: 772 KVWSWG-DGDFGKLG----RGGSER--CLIPVEVEQLRGLQICKILCGAQFTVALTKTGT 824
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W WG Y LG G + +PKL+ L +I IA G H LA+T DG+VFSWG
Sbjct: 825 VWTWGKGDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDND 884
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
HGQLG T +KVP +I L + + ++ACG S S A TE
Sbjct: 885 HGQLGTGETDVKKVPNLITGLHNHRIKYVACGSSHSIAWTE 925
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 100/180 (55%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGG--FFTMVLTE 56
ELYTWG+ GR G LG G ++ P +V+AL V V+CG T+ +T
Sbjct: 1601 ELYTWGK----GRYGRLGHGDSDDQLK----PKQVEALQFFFVLDVACGSGDAQTLCITN 1652
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P ++ +L I+++ G S+ALT G +++WG
Sbjct: 1653 DDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWG 1712
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH ++ + PM++ AL ++ VT I+CG T++G++Y WG+ + QLG
Sbjct: 1713 KGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLG 1772
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 91/164 (55%), Gaps = 11/164 (6%)
Query: 23 NEAGGLSIPSKVKA--LPVPVAAVSC-----GGFFTMVLTEEGQLWNWGANSNYELGRGD 75
++ GGL SKVK+ L ++++ C G T +T +G+L++ G +S +LG GD
Sbjct: 569 DQLGGLK-GSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESSFGKLGIGD 627
Query: 76 RVGG-WKPKLLP--NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
G P+L+ N + V + + +GG H +ALT DG FSWG G +GQLGH +
Sbjct: 628 ITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLGHGNLMSCS 687
Query: 133 VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
P +IEA + VT I+CG + SAA+ E LY WG +LG
Sbjct: 688 KPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLG 731
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 51 TMVLTEEGQL-WNWGANSNYELGRGDRVGGWKPKLLPNL--VDVRIIQIANGGYHSLALT 107
T+ +T +G L + G +N +LG G P+LL ++ ++++ I + +GG H LAL+
Sbjct: 1486 TVCITTDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALS 1545
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
DG+VFSWG G G+LGH Q P IE + +T+I GGS SAA+ G+LY W
Sbjct: 1546 SDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTW 1605
Query: 168 GNAKDSQLG 176
G + +LG
Sbjct: 1606 GKGRYGRLG 1614
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 5/167 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
G+LGLG L +K + + +V GG + L+ +G++++WG + +L
Sbjct: 1505 GQLGLGYSETVTSPRLLE---SIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGEDGKL 1561
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G G+R +PK + I I GG HS A+ +G++++WG G +G+LGH + +Q
Sbjct: 1562 GHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQ 1621
Query: 132 KVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
P +EAL FV +ACG + + +T ++ WG+ +LG
Sbjct: 1622 LKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLG 1668
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 88/177 (49%), Gaps = 8/177 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF--FTMVLTEEGQ 59
LYTWG + GRLG G +E L L V VSCG T+ +T++ +
Sbjct: 719 LYTWGLGDF-GRLGHG-----DEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDK 772
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG P + L ++I +I G ++ALT G V++WG G
Sbjct: 773 VWSWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGD 832
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+LGH + + P ++E L + V IA G AVT+ G+++ WG+ QLG
Sbjct: 833 FYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLG 889
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P ++ L + V CG F+M LT+ G L
Sbjct: 1656 VWSWG-DGDYGKLGRGG------SDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVL 1708
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG Y LG G +P ++ L + + I+ G H + TD+G+V+ WG
Sbjct: 1709 YTWGKGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDE 1768
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
GQLG ++ P + L ++ + I+CG + + A W +K S+
Sbjct: 1769 GQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIA---------WSTSKASE 1813
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 13/182 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG----PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTE 56
+LY+ G + G+LG+G G P GL+ L V +V GG M LT
Sbjct: 611 KLYSCG-ESSFGKLGIGDITGNVTSPRLVTGLN------QLIVTKVSVHSGGNHVMALTS 663
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+G ++WG N +LG G+ + KP L+ V + I+ G HS A+ ++ +++WG
Sbjct: 664 DGLAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWG 723
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQ 174
G G+LGH + P + V ++CG + + +T+ K++ WG+ +
Sbjct: 724 LGDFGRLGHGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGK 783
Query: 175 LG 176
LG
Sbjct: 784 LG 785
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
VF WG QLG K P + + L+ IA G ++ +T KGKLY G +
Sbjct: 560 VFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESS 619
Query: 172 DSQLGV 177
+LG+
Sbjct: 620 FGKLGI 625
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 8/172 (4%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +SIP +V+ L V ++ G F + L E+G LW WG N +LG GD
Sbjct: 180 PGDIKQISIPVRVQGLE-NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSF 238
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK----VPMVI 137
P + L D+ ++ IA GG+HS ALT++G+V+ WG G HG+LG F N K +P +
Sbjct: 239 PIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLG--FGDNDKSSKMLPQKV 296
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
LA E + ++CGG+ S A+T G+++ +G +LG G V P+E
Sbjct: 297 NLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY-GRKVTTGQPLE 347
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 30/180 (16%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
L+ WG +E G+LG G + S P V+ L + + ++ GG+ + LT EG++
Sbjct: 217 LWAWGNNE-YGQLGTG------DTQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEV 269
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYHSLALTDDGKVFSWG 116
+ WG + LG GD K+LP V++ IIQ++ GG HS+ALT DG++FS+G
Sbjct: 270 YGWGRGEHGRLGFGDNDK--SSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFG 327
Query: 117 YGGHGQLGH----SFTQNQKVPMVIEALADEF------------VTHIACGGSTSAAVTE 160
G HG+LG+ + Q ++P+ I L F H+ACGG + A+ E
Sbjct: 328 RGDHGRLGYGRKVTTGQPLELPIDIPPLEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 16/177 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+ WG E +G+LGLG + S V+AL P V +V G ++ + ++G+L
Sbjct: 7 VIAWGSGE-DGQLGLGTDEEKE------LASVVEALEPFNVRSVVGGSRNSLAICDDGKL 59
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N LG P L+ +L V+I+Q A GG+H LA+ D G+ ++WG
Sbjct: 60 FTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 120 HGQLGHSFTQNQ-----KVPMVI-EALADEF-VTHIACGGSTSAAVTEKGKLYMWGN 169
+GQ G ++++ + +VI + A + V +A GG+ S +T +G ++ WG
Sbjct: 120 YGQCGEEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTREGYVWTWGQ 176
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG+ + +LG G ++ L + + G +SLA+ DDGK+F+WG+ G
Sbjct: 10 WGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 123 LGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LGH T+ + P ++++LA + A GG AV ++G+ Y WG + Q G
Sbjct: 70 LGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V +WG G GQLG + +++ V+EAL V + G S A+ + GKL+ WG +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 172 DSQLGVPGLPVVQPCP 187
LG P + P
Sbjct: 67 RGTLGHPPETKTESTP 82
>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 456
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 14/187 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG +E +LGLG ++P +V+AL + + VSCG +FT + E+G+
Sbjct: 130 KLYVWGSNE-YSKLGLGESSEME-----TLPREVEALKGIKIVDVSCGDYFTAAVDEDGK 183
Query: 60 LWNWG-ANSNYELGRGDRVGGWK----PKLLPNLVD--VRIIQIANGGYHSLALTDDGKV 112
+++WG S + G G K P+LL LVD V I + G +H++ALT DG++
Sbjct: 184 MYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGEI 243
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
++WG G +G+LG+ + +VP IE + + V IA G S A+T+KG+LY WG
Sbjct: 244 WAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGELYSWGGNSQ 303
Query: 173 SQLGVPG 179
+QLG+ G
Sbjct: 304 NQLGIGG 310
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 72/136 (52%), Gaps = 6/136 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VP+A V CG F T+ LT++G++W WG LG G+ P+ + ++ IA
Sbjct: 222 VPIATVECGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAA 281
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLG------HSFTQNQKVPMVIEALADEFVTHIACGG 152
G S ALTD G+++SWG QLG + +P+++EA V IA G
Sbjct: 282 GRDFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGY 341
Query: 153 STSAAVTEKGKLYMWG 168
+AAVTE G+LYMWG
Sbjct: 342 DHAAAVTEDGRLYMWG 357
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + + +LG+G G + SIP V+A + V ++ G +TE+G+
Sbjct: 294 ELYSWGGN-SQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGR 352
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WGA E P + + + ++ Q+A G +++ LTDDGKVF++G G
Sbjct: 353 LYMWGAKIWIE-----------PHEMTAVNEHKMTQVACGRQYTVGLTDDGKVFTFGKGS 401
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
LGH +NQ P+ I+ALA +T ++CG A+
Sbjct: 402 SNCLGHGDRKNQLQPVKIQALAGVNITSVSCGDYHMGAI 440
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 12/186 (6%)
Query: 2 LYTWGRDEGEGRLGLGP--GRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
+YTWG G+LG G G A P +AL + V G + + EEG
Sbjct: 71 VYTWGNGT-LGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAIDEEG 129
Query: 59 QLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+L+ WG+N +LG G+ P+ + L ++I+ ++ G Y + A+ +DGK++SWG+
Sbjct: 130 KLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAVDEDGKMYSWGW 189
Query: 118 GGHGQ-----LGHSFTQNQKVPMVIEALADEFV--THIACGGSTSAAVTEKGKLYMWGNA 170
GG LGH+ +++ P ++ L D+ V + CG + A+T+ G+++ WGN
Sbjct: 190 GGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGEIWAWGNG 249
Query: 171 KDSQLG 176
+ +LG
Sbjct: 250 EYGRLG 255
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 25/183 (13%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
E++ WG E GRLG G E+ +P ++ V +++ G F+ LT++G+
Sbjct: 242 EIWAWGNGE-YGRLGNG------ESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGE 294
Query: 60 LWNWGANSNYELGRGD--RVGGWKPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVF 113
L++WG NS +LG G + + + +P LV+ + + QIA G H+ A+T+DG+++
Sbjct: 295 LYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLY 354
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
WG + P + A+ + +T +ACG + +T+ GK++ +G +
Sbjct: 355 MWG-----------AKIWIEPHEMTAVNEHKMTQVACGRQYTVGLTDDGKVFTFGKGSSN 403
Query: 174 QLG 176
LG
Sbjct: 404 CLG 406
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGG--------WKPKLLPNLVDVRIIQIANGGYH 102
T + ++ WG + +LG G + PKL L I + G H
Sbjct: 62 TASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASH 121
Query: 103 SLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
S A+ ++GK++ WG + +LG ++ + +P +EAL + ++CG +AAV E
Sbjct: 122 SAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAVDED 181
Query: 162 GKLYMWG 168
GK+Y WG
Sbjct: 182 GKMYSWG 188
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 112 VFSWGYGGHGQLGH--------SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
V++WG G GQLGH + P + EAL + +TH+ G S SAA+ E+GK
Sbjct: 71 VYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAIDEEGK 130
Query: 164 LYMWGNAKDSQLGVPGLPVVQPCPVE 189
LY+WG+ + S+LG+ ++ P E
Sbjct: 131 LYVWGSNEYSKLGLGESSEMETLPRE 156
>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1859
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 14/183 (7%)
Query: 2 LYTWGRDEGEGRLGLGP-GRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+ TWG +LG GR ++A P ++ +P + ++SCG +++ LTE G
Sbjct: 590 IMTWG-SSSNCKLGFKTEGREQSQA----TPERLPNFNIPEICSISCGSYYSAALTENGD 644
Query: 60 LWNWGANSNYE-----LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
++ WG S LG G P + +L +V ++ I G YHS AL +G++ +
Sbjct: 645 VYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSEVVLVSI--GYYHSAALKSNGELLT 702
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG G GQLGH NQ +P V++ + +VT + CG + +T+ GK++ WG ++ Q
Sbjct: 703 WGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQ 762
Query: 175 LGV 177
LG+
Sbjct: 763 LGL 765
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 4/186 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WGR + G G E L P+KV++L V VS G + + L G+L
Sbjct: 644 DVYMWGRGSVKNPPLSTLGNGSLEDQLL--PTKVESLS-EVVLVSIGYYHSAALKSNGEL 700
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG + +LG GD + PK++ + + Q+ G H++ LT +GKVF+WG +
Sbjct: 701 LTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEY 760
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN-AKDSQLGVPG 179
GQLG TQ PM++ +L + IACG + A +T ++ ++GN A +
Sbjct: 761 GQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNGAAMGSANIIS 820
Query: 180 LPVVQP 185
+P++ P
Sbjct: 821 VPMMVP 826
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 64/225 (28%), Positives = 95/225 (42%), Gaps = 58/225 (25%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
EL TWG E +G+LG G + +IP V+ + V V CG T+ LT+ G+
Sbjct: 699 ELLTWGCGE-DGQLGHG------DVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGK 751
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH----------------- 102
++ WG + +LG GD P L+ +L IIQIA G H
Sbjct: 752 VFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNGA 811
Query: 103 -------------------------------SLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
+ ALT+ G V++WG G +LGH Q++
Sbjct: 812 AMGSANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQ--ELGHGTNQSE 869
Query: 132 KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
P +++ L + + I+CGG A +T+ GK+Y G QLG
Sbjct: 870 LHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQLG 914
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 52/146 (35%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Query: 14 LGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
L G G A +S+P V AL + + +SCG + T LTE G ++ WG S ELG
Sbjct: 805 LVFGNGAAMGSANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWG--SGQELG 862
Query: 73 RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
G PKL+ L I QI+ GG H LTD GK+++ G GQLGH+ +Q
Sbjct: 863 HGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQLGHA-QGDQN 921
Query: 133 VPMVIEALADEFVTHIACGGSTSAAV 158
P I++L ++CG + +A++
Sbjct: 922 KPKKIDSLLKTTFISVSCGENHNASL 947
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 51 TMVLTEEGQLWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
T + T+ G + WG++SN +LG G P+ LPN I I+ G Y+S ALT
Sbjct: 582 TQLDTQRG-IMTWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALT 640
Query: 108 DDGKVFSWGYGG-----HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
++G V+ WG G LG+ ++Q +P +E+L++ V ++ G SAA+ G
Sbjct: 641 ENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSE--VVLVSIGYYHSAALKSNG 698
Query: 163 KLYMWGNAKDSQLG 176
+L WG +D QLG
Sbjct: 699 ELLTWGCGEDGQLG 712
>gi|380029875|ref|XP_003698590.1| PREDICTED: uncharacterized protein LOC100869963 [Apis florea]
Length = 1858
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+YTWG +G LG GP G + S + + V +VSCG T+ +T G ++
Sbjct: 837 VYTWGSSV-QGCLGTGPS--VLRYGSPQVISFFWIMEIEVLSVSCGHCHTLAVTNNG-VY 892
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG++ +LG G + P+L+ +L II G YHS+ALT DG+VF+WG+G HG
Sbjct: 893 AWGSSQFGQLGLGKILQCSTPELITSLAQEVIIDAVAGQYHSVALTSDGRVFTWGWGVHG 952
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLGH T + P ++ +L + I G + + A++ +G +Y +G QLGV
Sbjct: 953 QLGHGNTDKKMTPTLVTSLLGIVIRFITAGHAHTLALSTEGIIYAFGCNIFGQLGV 1008
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 46 CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW-KPKLLPN--LVDVRIIQIANGGYH 102
C GF + L G ++ WG++ LG G V + P+++ ++++ ++ ++ G H
Sbjct: 823 CAGFSHVALIRNGNVYTWGSSVQGCLGTGPSVLRYGSPQVISFFWIMEIEVLSVSCGHCH 882
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
+LA+T++G V++WG GQLG P +I +LA E + G S A+T G
Sbjct: 883 TLAVTNNG-VYAWGSSQFGQLGLGKILQCSTPELITSLAQEVIIDAVAGQYHSVALTSDG 941
Query: 163 KLYMWGNAKDSQLG 176
+++ WG QLG
Sbjct: 942 RVFTWGWGVHGQLG 955
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEEGQ 59
+Y WG + G+LGLG + S P + +L V + AV+ G + ++ LT +G+
Sbjct: 891 VYAWGSSQF-GQLGLG------KILQCSTPELITSLAQEVIIDAVA-GQYHSVALTSDGR 942
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG + +LG G+ P L+ +L+ + I I G H+LAL+ +G ++++G
Sbjct: 943 VFTWGWGVHGQLGHGNTDKKMTPTLVTSLLGIVIRFITAGHAHTLALSTEGIIYAFGCNI 1002
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GQLG VP I+ E + IA G + AV+ KLY+WG
Sbjct: 1003 FGQLGVGNNIKSSVP--IKVSLSERIILIATGYFHNLAVSCTNKLYIWG 1049
Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 81 KPKLL-PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP 134
KP ++ +LV IIQI+ G +H+ +T DG +++WG GQ+G+ + +P
Sbjct: 1144 KPTIVDTSLVKGNIIQISTGCHHNALVTKDGSLYTWGRNLDGQIGNGSRREVPIP 1198
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 99/167 (59%), Gaps = 5/167 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLG+G G + ++ ++ + + AV+ GG + L+ EG +++WG + +L
Sbjct: 3995 GRLGIG---GTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4051
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G G+R+ +PKL+ +L+ + I+ IA GG+HS A+T G +++WG G +G+LGH + +Q
Sbjct: 4052 GHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQ 4111
Query: 132 KVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
P V+EAL D V +ACG + + VT+ ++ WG+ +LG
Sbjct: 4112 LRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLG 4158
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 100/182 (54%), Gaps = 18/182 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL----PVPVAAVSCGGFFTM-VLTE 56
+Y WG ++ + GL + + IP + + L P+ +A GG T+ ++++
Sbjct: 2953 VYVWGLNDKDQLGGL-------KGSKIKIPVRSEVLSKLKPIHIA----GGSKTLFIVSQ 3001
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFS 114
EG+L+ G +N LG GD +PKL+P L I ++A +GG H+LALT DGKVFS
Sbjct: 3002 EGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFS 3061
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG G G+LGH P +IE+L + + IACG SAA+ G+LY WG + +
Sbjct: 3062 WGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3121
Query: 175 LG 176
LG
Sbjct: 3122 LG 3123
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 102/194 (52%), Gaps = 13/194 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G +++P+ V L V V+CG T+ +T
Sbjct: 581 ELYTWGRG-NYGRLGHGSN------DDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTAS 633
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G PK++ L+D+ ++++ GG S ALT G+V++WG
Sbjct: 634 GIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGK 693
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +LGH ++ + P +IE+L D+ + ++ GG+ A+TE +Y WG Q+
Sbjct: 694 GDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQIDP 753
Query: 178 PGLPVVQP---CPV 188
PVV CP
Sbjct: 754 TLGPVVSEPSLCPT 767
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY G EG GRLGLG E + S+ + AV GG + LT++G+
Sbjct: 3004 KLYACG--EGTNGRLGLGDDYNMCEPKLIPFLSQ---YVIKKVAVHSGGKHALALTQDGK 3058
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG + +LG G+ KP+L+ +L RI IA G HS A+ +G++++WG G
Sbjct: 3059 VFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGE 3118
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+G+LGH T Q P +++AL+ + V +ACG + + ++T G +Y WG+ +LG
Sbjct: 3119 YGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLG 3177
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELYTWG E GRLG G + P V+AL V V+CG TM LT +
Sbjct: 3110 ELYTWGLGE-YGRLGHG------DTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTAD 3162
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG +LGRG G + P L+ L + ++Q+ G SLALT G+V++WG
Sbjct: 3163 GCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGK 3222
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3223 GDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3281
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
PV + A G + LT++G +++WG LG GD + +PKL+ L++ II IA
Sbjct: 508 PVTMIASHSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIA 567
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STS 155
G +S AL+ G++++WG G +G+LGH + VP ++ L V H+ACG S +
Sbjct: 568 CGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQT 627
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
VT G ++ WG+ +LG
Sbjct: 628 LCVTASGIVFSWGDGDYGKLG 648
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+YTWG D G+LG G + G P V L + V V CG F++ LT+ G++
Sbjct: 3165 VYTWG-DGDFGKLGRGG------SDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEV 3217
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G+ KP L+ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3218 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3277
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P ++ L D + ++CG S S A
Sbjct: 3278 GQQGNGTTIVNRKPSLVHELDDTRMNRVSCGSSHSIA 3314
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 17/179 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT G +
Sbjct: 4146 VWSWG-DGDYGKLGRGG------SDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAV 4198
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L +II IA G H +A +D G+VF+WG
Sbjct: 4199 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDE 4258
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG T + P ++ AL + +T +ACG + + A W AK +Q +P
Sbjct: 4259 GQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLA---------WSTAKATQSRMPA 4308
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGG--FFTMVLTEE 57
LYTWG+ GR G LG G ++ P V+AL V V+CG T+ +T++
Sbjct: 4092 LYTWGK----GRYGRLGHGDSDDQLR----PKVVEALQDYKVIDVACGSGDAQTLCVTDD 4143
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + +I++ G S+ALT G V++WG
Sbjct: 4144 DNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGK 4203
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P + AL + + IA G A ++KG+++ WG+ + QLG
Sbjct: 4204 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4262
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G P V K L + V V CGG F+ LT G++
Sbjct: 636 VFSWG-DGDYGKLGRGGSDGSK------TPKIVDKLLDINVVRVFCGGQFSAALTARGEV 688
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG Y LG G+ PKL+ +L D +I ++ GG H LALT+D V+ WG +
Sbjct: 689 YTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDY 748
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ+ + P + L+ + V +A G + S A
Sbjct: 749 GQIDPTLGPVVSEPSLCPTLSSKNVIGLASGPTQSFA 785
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P +L +R IQ+A G A+T DGKV+S GY
Sbjct: 3932 GAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGY 3991
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T + VP ++E++ F+ +A GG A++ +G +Y WG D +L
Sbjct: 3992 GAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4051
Query: 176 G 176
G
Sbjct: 4052 G 4052
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V+ WG QLG K+P+ E L+ HIA G T V+++GKLY G
Sbjct: 2953 VYVWGLNDKDQLGGLKGSKIKIPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGT 3012
Query: 172 DSQLGV 177
+ +LG+
Sbjct: 3013 NGRLGL 3018
>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
Length = 675
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + P V+ L VP+ +S G +M L+ G
Sbjct: 67 ELFAWGQN-LHGQLGIG-----RLFASIPTPQLVEHLSGVPLVQISAGKAHSMALSMSGN 120
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G G P L+ L ++ +A GG H+ LT+DG+VF++G G
Sbjct: 121 IYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTEDGQVFTFGAGK 180
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
HGQLGH+ TQN+ P ++ L VT +ACG T A V++ GK++ +G+ K+ QLG
Sbjct: 181 HGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGKEGQLG 238
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 84/137 (61%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N + +LG G P+L+ +L V ++QI+ G
Sbjct: 49 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAG 108
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ G ++SWG GQLG T ++ P ++EAL + V +ACGGS +A +T
Sbjct: 109 KAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLT 168
Query: 160 EKGKLYMWGNAKDSQLG 176
E G+++ +G K QLG
Sbjct: 169 EDGQVFTFGAGKHGQLG 185
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
+Y+WGR++ G+LGLG G PS V+AL V ++CGG T +LTE+GQ+
Sbjct: 121 IYSWGRNDL-GQLGLG------HTDGEEFPSLVEALDSQKVEFLACGGSHTALLTEDGQV 173
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA + +LG +P+L+ L +R+ Q+A G H+LA D GKVFS+G G
Sbjct: 174 FTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGK 233
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T NQ +P+ ++ ++E
Sbjct: 234 EGQLGNGGTHNQLIPLPMKLPSNE 257
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 13/140 (9%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
+ + +V G ++L+ +G+ + + N + E R + L + IIQI
Sbjct: 7 MKIHSVDQGAEHMLILSSDGKPFEY--NYSIEHARFQCI----------LQEKSIIQITC 54
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
G YHSLAL+ G++F+WG HGQLG + P ++E L+ + I+ G + S A
Sbjct: 55 GDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKAHSMA 114
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
++ G +Y WG QLG+
Sbjct: 115 LSMSGNIYSWGRNDLGQLGL 134
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
++I + G H L L+ DGK F + Y + H+ Q L ++ + I C
Sbjct: 7 MKIHSVDQGAEHMLILSSDGKPFEYNYS----IEHARFQC--------ILQEKSIIQITC 54
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
G S A+++ G+L+ WG QLG+ L P P
Sbjct: 55 GDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTP 91
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 8/172 (4%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S+P +V+ L V ++ G F + L E+G LW WG N +LG GD
Sbjct: 180 PGDIKQISVPVRVQGLE-NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSY 238
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK----VPMVI 137
P + L D+ ++ IA GG+HS ALT++G+V+ WG G HG+LG F N K +P +
Sbjct: 239 PIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLG--FGDNDKSSKMLPQKV 296
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
LA E + ++CGG+ S A+T G+++ +G +LG G V P+E
Sbjct: 297 NLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY-GRKVTTGQPLE 347
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 30/180 (16%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
L+ WG +E G+LG G + S P V+ L + + ++ GG+ + LT EG++
Sbjct: 217 LWAWGNNE-YGQLGTG------DTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEV 269
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYHSLALTDDGKVFSWG 116
+ WG + LG GD K+LP V++ IIQ++ GG HS+ALT DG++FS+G
Sbjct: 270 YGWGRGEHGRLGFGDNDK--SSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFG 327
Query: 117 YGGHGQLGH----SFTQNQKVPMVIEALADEF------------VTHIACGGSTSAAVTE 160
G HG+LG+ + Q ++P+ I F H+ACGG + A+ E
Sbjct: 328 RGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+ WG E +G+LGLG + S V AL P V +V G ++ + ++G+L
Sbjct: 7 VIAWGSGE-DGQLGLGTDEEKE------LASVVDALEPFNVRSVVGGSRNSLAICDDGKL 59
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N LG P L+ +L +V+I+Q A GG+H LA+ D G+ ++WG
Sbjct: 60 FTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 120 HGQLGHSFTQNQ-----KVPMVIEALADEFVT--HIACGGSTSAAVTEKGKLYMWGN 169
+GQ G ++++ + +VI + +T +A GG+ S +T +G ++ WG
Sbjct: 120 YGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ 176
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYHSLALTDDGKVFSWGYG 118
WG+ + +LG G + K L ++VD + + G +SLA+ DDGK+F+WG+
Sbjct: 10 WGSGEDGQLGLGTD----EEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWN 65
Query: 119 GHGQLGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G LGH T+ + P ++++LA+ + A GG AV ++G+ Y WG + Q G
Sbjct: 66 QRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V +WG G GQLG + +++ V++AL V + G S A+ + GKL+ WG +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 172 DSQLGVPGLPVVQPCP 187
LG P + P
Sbjct: 67 RGTLGHPPETKTESTP 82
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 98/167 (58%), Gaps = 5/167 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLG+G G + ++ ++ + V AV+ GG + L+ EG +++WG + +L
Sbjct: 4016 GRLGIG---GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4072
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G G+R+ +PKL+ L+ I+ IA GG+HS A+T G +++WG G +G+LGH +++Q
Sbjct: 4073 GHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ 4132
Query: 132 KVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
P +IEAL D V +ACG + + VT+ ++ WG+ +LG
Sbjct: 4133 LTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLG 4179
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 102/178 (57%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTM-VLTEEGQL 60
+Y WG ++ + +LG G + SK+K PV +A GG T+ V+++EG+L
Sbjct: 2936 VYVWGLNDKD-QLGGLKGSKIKLPVYSEVLSKLK--PVHIA----GGSKTLFVVSQEGKL 2988
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ G +N LG GD +PK +P L ++ + + +GG H+LALT DGKVFSWG G
Sbjct: 2989 YACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEG 3048
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LGH + + P +IE+L + + IACG SAA+T G+LY WG + +LG
Sbjct: 3049 EDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLG 3106
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY G EG GRLGLG E + S+ + +V GG + LT++G+
Sbjct: 2987 KLYACG--EGTNGRLGLGDDSNVCEPKPIPFLSQY---VIKKVSVHSGGKHALALTQDGK 3041
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG + +LG G+ + KP+L+ +L RI IA G HS A+T G++++WG G
Sbjct: 3042 VFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGE 3101
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+G+LGH T Q P ++++L + + IACG + + A+T G +Y WG+ +LG
Sbjct: 3102 YGRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLG 3160
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELYTWG E GRLG G + S P V++L + ++CG TM LT +
Sbjct: 3093 ELYTWGLGE-YGRLGHG------DTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTAD 3145
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G + P L+ L + ++QI G SLALT G+V++WG
Sbjct: 3146 GLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGK 3205
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3206 GDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQG 3264
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 17/179 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G IP K+++L + V V CG F++ LT G +
Sbjct: 4167 VWSWG-DGDYGKLGRGG------SDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAI 4219
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L +II IA G H +A TD G+VF+WG
Sbjct: 4220 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDE 4279
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG T + P ++ AL + +T +ACG + + A W K +Q +P
Sbjct: 4280 GQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLA---------WSTMKATQSKMPA 4329
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG G + G P + L + V + CG F++ LT+ G++
Sbjct: 3148 VYSWG-DGDFGKLGRGG------SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEV 3200
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G+ KP L+ L ++I +A G H LA+TD G+V++WG H
Sbjct: 3201 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDH 3260
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T K P ++ L D V ++CG S S A
Sbjct: 3261 GQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3297
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P+ + A G + LT++ +++WG LG GDR +PKL+ LV+ I IA
Sbjct: 504 PIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIA 563
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STS 155
G +S AL+ +G++++WG G +G+LGH + N +P ++ AL V ++ACG S +
Sbjct: 564 CGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQT 623
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
VT G ++ WG+ +LG
Sbjct: 624 LCVTASGIVFSWGDGNYGKLG 644
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G + + IP+ V AL V V+CG T+ +T
Sbjct: 577 ELYTWGRG-NYGRLGHG------NSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTAS 629
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG + +LGRG G PK++ L+D+ + ++ GG S ALT G+V++WG
Sbjct: 630 GIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGK 689
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +LGH + + P +I+ L + V + G A+TE +Y WG Q+
Sbjct: 690 GEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQID- 748
Query: 178 PGLPVVQPCPV 188
P L V P P
Sbjct: 749 PALGTVVPEPT 759
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGG--FFTMVLTEE 57
LYTWG+ GR G LG G ++ P ++AL V V+CG T+ +T++
Sbjct: 4113 LYTWGK----GRYGRLGHGDSEDQL----TPKLIEALQDYKVIDVACGSGDAQTLCVTDD 4164
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G +++WG
Sbjct: 4165 DNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGK 4224
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P + AL + + IA G A T+KG+++ WG+ + QLG
Sbjct: 4225 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4283
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G P V K L + VA V CGG F+ LT G++
Sbjct: 632 VFSWG-DGNYGKLGRGG------CDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEV 684
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG Y LG G+ PK++ L ++ ++ G H LALT+D ++ WG +
Sbjct: 685 YTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDY 744
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ+ + P + L+ + V +ACG + S A
Sbjct: 745 GQIDPALGTVVPEPTLCPTLSGKNVIGLACGPTQSFA 781
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +L +R +Q+ G A+T DGKV++ GY
Sbjct: 3953 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 4012
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T + VP ++E++ FV +A GG A++ +G +Y WG D +L
Sbjct: 4013 GAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4072
Query: 176 G 176
G
Sbjct: 4073 G 4073
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V+ WG QLG K+P+ E L+ HIA G T V+++GKLY G
Sbjct: 2936 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGT 2995
Query: 172 DSQLGV-PGLPVVQPCPV 188
+ +LG+ V +P P+
Sbjct: 2996 NGRLGLGDDSNVCEPKPI 3013
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 18/150 (12%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
+LP P M+ +EG N + N+EL + + D +++Q
Sbjct: 3893 SLPKPFCLEVTKQINEMITDKEG---NTKDHENHELFKQEH-------------DEQLLQ 3936
Query: 96 IANGGYHSLALTDDGK--VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
N L+ DG ++ WG+ GQLG K+P++ E+L+ + G
Sbjct: 3937 WLNRRPEDWMLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQ 3996
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGVPGLPVV 183
T AVT GK+Y G +LG+ G V
Sbjct: 3997 TLFAVTADGKVYATGYGAVGRLGIGGTDSV 4026
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG E S P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFSWGQNK-HGQLGLG-----FELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +++ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+QIA G YHSLAL+ +VFSWG HGQLG F ++Q P +I++L
Sbjct: 135 TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTD 113
Query: 121 GQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG T+ KVP I++L D + IACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL 171
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+PG
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPG 120
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
Length = 1286
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 98/176 (55%), Gaps = 13/176 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCG-GFFTMVLTEEGQL 60
++TWG +E G+LG+G +++P +V L + AVS G G+ +M L+E+G +
Sbjct: 104 VWTWGSNE-NGQLGIG------TVTDMNVPGQVSGLS-GIKAVSGGLGYHSMALSEDGSV 155
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG N N ELG G + P + L DV IA GGY SLAL DG V++WG G
Sbjct: 156 WTWGKNDNGELGNGTTLQQNTPVQVAGLNDV--TAIAAGGYFSLALKSDGTVWAWGVNGD 213
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T ++ VP+ + L D V IA GGS S AVT+ G ++ WG LG
Sbjct: 214 GELGDGTTTDRYVPVQVAGLTD--VMAIAAGGSHSLAVTQDGTVWAWGKNTYGTLG 267
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 13/188 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++TWG+++ G LG G N P +V L V A++ GG+F++ L +G +W
Sbjct: 155 VWTWGKND-NGELGNGTTLQQN------TPVQVAGLN-DVTAIAAGGYFSLALKSDGTVW 206
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N + ELG G + P + L DV + IA GG HSLA+T DG V++WG +G
Sbjct: 207 AWGVNGDGELGDGTTTDRYVPVQVAGLTDV--MAIAAGGSHSLAVTQDGTVWAWGKNTYG 264
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV-PGL 180
LG N+ P+ I+ L + + +A GG S A+ G ++ WG+ QLGV
Sbjct: 265 TLGDGTRTNRTRPVQIKNL--QHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNA 322
Query: 181 PVVQPCPV 188
+ P PV
Sbjct: 323 SSLIPVPV 330
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 12/175 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG + G+G LG G +P +V L V A++ GG ++ +T++G +W
Sbjct: 205 VWAWGVN-GDGELGDG------TTTDRYVPVQVAGL-TDVMAIAAGGSHSLAVTQDGTVW 256
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N+ LG G R +P + NL I+ +A GGYHSLAL G V+SWG
Sbjct: 257 AWGKNTYGTLGDGTRTNRTRPVQIKNLQ--HIVAVAGGGYHSLALDRTGNVWSWGDNSQR 314
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG + +P+ + + E V IA GG S A+ + G ++ WG QLG
Sbjct: 315 QLGVGSNASSLIPVPVSGI--EHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLG 367
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD 90
P ++K L + AV+ GG+ ++ L G +W+WG NS +LG G P + +
Sbjct: 277 PVQIKNLQ-HIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNASSLIPVPVSGIEH 335
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
VR +IA GG+HS+A+ DG V+ WG+ G GQLG + + P + +A+ D
Sbjct: 336 VR--EIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGTSSTRDTPTLTKAVLDTTPPDPGS 393
Query: 151 GGSTSAAVTEKGKLYMWGNAKDS 173
G ++T W A D+
Sbjct: 394 GTLNPDSITTDSVALQWPKAVDN 416
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 46 CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHS 103
G + T L G++++WG +LG G W + P + +I + G +
Sbjct: 40 AGYYHTASLVSSGEVYSWGYGDRGQLGNGT----WSARTTPVMAKGLNHVIDVHTGVRST 95
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEKG 162
+AL DG V++WG +GQLG + VP + L+ + ++ G G S A++E G
Sbjct: 96 MALRSDGTVWTWGSNENGQLGIGTVTDMNVPGQVSGLSG--IKAVSGGLGYHSMALSEDG 153
Query: 163 KLYMWGNAKDSQLGVPGLPVVQPCPVE 189
++ WG + +LG G + Q PV+
Sbjct: 154 SVWTWGKNDNGELG-NGTTLQQNTPVQ 179
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
++ G YH+ +L G+V+SWGYG GQLG+ + P++ + L V + G +
Sbjct: 37 KLVAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGL--NHVIDVHTGVRS 94
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
+ A+ G ++ WG+ ++ QLG+
Sbjct: 95 TMALRSDGTVWTWGSNENGQLGI 117
>gi|350402535|ref|XP_003486520.1| PREDICTED: hypothetical protein LOC100745121 [Bombus impatiens]
Length = 1865
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+YTWG G LG+GP G + + V V +VSCG T+ +T G ++
Sbjct: 837 VYTWGSSV-HGCLGIGPS--VLRYGSPQAITFFWLMEVEVLSVSCGHCHTLAVTNNG-VY 892
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG++ +LG G + P+L+ +L II G YHS+ALT DG+VF+WG+G HG
Sbjct: 893 AWGSSQFGQLGLGKVLQCSTPELITSLAQEVIIDAVAGQYHSVALTADGRVFTWGWGVHG 952
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLGH T + P ++ +L + +I G + + A++ +G +Y +G QLGV
Sbjct: 953 QLGHGNTDKKMTPTLVTSLLGTVIRYITAGHAHTLALSTEGIVYAFGCNIFGQLGV 1008
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEEGQ 59
+Y WG + G+LGLG + S P + +L V + AV+ G + ++ LT +G+
Sbjct: 891 VYAWGSSQF-GQLGLG------KVLQCSTPELITSLAQEVIIDAVA-GQYHSVALTADGR 942
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG + +LG G+ P L+ +L+ I I G H+LAL+ +G V+++G
Sbjct: 943 VFTWGWGVHGQLGHGNTDKKMTPTLVTSLLGTVIRYITAGHAHTLALSTEGIVYAFGCNI 1002
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GQLG VPM + E +T I G + AV+ KLY+WG
Sbjct: 1003 FGQLGVGSNVKSSVPMKVS--LSERITLITTGYFHNLAVSYTNKLYIWG 1049
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 46 CGGFFTMVLTEEGQLWNWGANSNYELGRGD---RVGGWKPKLLPNLVDVRIIQIANGGYH 102
C GF + L G ++ WG++ + LG G R G + L++V ++ ++ G H
Sbjct: 823 CAGFSHVALIRNGNVYTWGSSVHGCLGIGPSVLRYGSPQAITFFWLMEVEVLSVSCGHCH 882
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
+LA+T++G V++WG GQLG P +I +LA E + G S A+T G
Sbjct: 883 TLAVTNNG-VYAWGSSQFGQLGLGKVLQCSTPELITSLAQEVIIDAVAGQYHSVALTADG 941
Query: 163 KLYMWGNAKDSQLG 176
+++ WG QLG
Sbjct: 942 RVFTWGWGVHGQLG 955
Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLG---HSFTQNQKVPMVIEALADEFVTHIACGGSTS 155
G+ +AL +G V++WG HG LG + L + V ++CG +
Sbjct: 824 AGFSHVALIRNGNVYTWGSSVHGCLGIGPSVLRYGSPQAITFFWLMEVEVLSVSCGHCHT 883
Query: 156 AAVTEKGKLYMWGNAKDSQLGV 177
AVT G +Y WG+++ QLG+
Sbjct: 884 LAVTNNG-VYAWGSSQFGQLGL 904
Score = 37.0 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 84 LLPNLVDVR-----IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP 134
L P +VD II+I+ G +H+ +T DG ++ WG GQ+G+ + +P
Sbjct: 1143 LKPTIVDTSLVKGDIIRISAGCHHNALITKDGSLYMWGRNLDGQIGNGSRREVPIP 1198
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 98/167 (58%), Gaps = 5/167 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLG+G G + ++ ++ + V AV+ GG + L+ EG +++WG + +L
Sbjct: 3847 GRLGIG---GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 3903
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G G+R+ +PKL+ L+ I+ IA GG+HS A+T G +++WG G +G+LGH +++Q
Sbjct: 3904 GHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ 3963
Query: 132 KVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
P +IEAL D V +ACG + + VT+ ++ WG+ +LG
Sbjct: 3964 LTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLG 4010
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 102/178 (57%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTM-VLTEEGQL 60
+Y WG ++ + +LG G + SK+K PV +A GG T+ V+++EG+L
Sbjct: 2792 VYVWGLNDKD-QLGGLKGSKIKLPVYSEVLSKLK--PVHIA----GGSKTLFVVSQEGKL 2844
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ G +N LG GD +PK +P L I ++A +GG H+LALT DGKVFSWG G
Sbjct: 2845 YACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEG 2904
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LGH + + P +IE+L + + IACG SAA+T G+LY WG + +LG
Sbjct: 2905 EDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLG 2962
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY G EG GRLGLG E + S+ + AV GG + LT++G+
Sbjct: 2843 KLYACG--EGTNGRLGLGDDSNVCEPKPIPFLSQY---VIKKVAVHSGGKHALALTQDGK 2897
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG + +LG G+ + KP+L+ +L RI IA G HS A+T G++++WG G
Sbjct: 2898 VFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGE 2957
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+G+LGH T Q P ++++L + V IACG + + A+T G +Y WG+ +LG
Sbjct: 2958 YGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLG 3016
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELYTWG E GRLG G + S P V++L V ++CG TM LT +
Sbjct: 2949 ELYTWGLGE-YGRLGHG------DTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTAD 3001
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G + P L+ L + ++QI G SLALT G+V++WG
Sbjct: 3002 GLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGK 3061
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3062 GDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQG 3120
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG G + G P + L + V + CG F++ LT+ G++
Sbjct: 3004 VYSWG-DGDFGKLGRGG------SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEV 3056
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G+ KP L+ L +II +A G H LA+TD G+V++WG H
Sbjct: 3057 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDH 3116
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T K P ++ L D V ++CG S S A
Sbjct: 3117 GQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3153
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 17/179 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G IP K+++L + V V CG F++ LT G +
Sbjct: 3998 VWSWG-DGDYGKLGRGG------SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAI 4050
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L +II IA G H +A TD G+VF+WG
Sbjct: 4051 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDE 4110
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG T + P ++ AL + +T +ACG + + A W K +Q +P
Sbjct: 4111 GQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLA---------WSTMKATQSKMPA 4160
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGG--FFTMVLTEE 57
LYTWG+ GR G LG G ++ P ++AL V V+CG T+ +T++
Sbjct: 3944 LYTWGK----GRYGRLGHGDSEDQL----TPKLIEALQDYKVIDVACGSGDAQTLCVTDD 3995
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + +I++ G S+ALT G +++WG
Sbjct: 3996 DNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGK 4055
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P + AL + + IA G A T+KG+++ WG+ + QLG
Sbjct: 4056 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4114
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFF---TMVLTE 56
ELYTWGR G+LG G N + IP+ V AL V V+CGG T+ +T
Sbjct: 574 ELYTWGRG-NYGKLGHG-----NSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTA 627
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
G +++WG ++ +LGRG G PK++ L+D+ + ++ G S ALT G+V++WG
Sbjct: 628 SGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWG 687
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LGH + + P +I+ L + + + G A+TE +Y WG Q+
Sbjct: 688 KGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQID 747
Query: 177 VPGLPVVQPCPV 188
P L + P P
Sbjct: 748 -PALGTIVPEPT 758
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P+ + A G + LT++ +++WG LG G+ +PKL+ LV+ I IA
Sbjct: 501 PITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIA 560
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGG---S 153
G +S AL+ +G++++WG G +G+LGH + ++ +P ++ AL V ++ACGG
Sbjct: 561 CGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDP 620
Query: 154 TSAAVTEKGKLYMWGNAKDSQLG 176
+ VT G ++ WG+ +LG
Sbjct: 621 QTLCVTASGIVFSWGDGNHGKLG 643
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G P V K L + VA V CG F+ LT G++
Sbjct: 631 VFSWG-DGNHGKLGRGG------CDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEV 683
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG +Y+LG G+ PK++ L +I + G H LALT+D V+ WG H
Sbjct: 684 YTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDH 743
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ+ + P + + + V +ACG + S A
Sbjct: 744 GQIDPALGTIVPEPTLCPTFSGKNVIGLACGPTQSFA 780
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +L +R +Q+ G A+T DGKV++ GY
Sbjct: 3784 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 3843
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T + VP ++E++ FV +A GG A++ +G +Y WG D +L
Sbjct: 3844 GAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 3903
Query: 176 G 176
G
Sbjct: 3904 G 3904
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V+ WG QLG K+P+ E L+ HIA G T V+++GKLY G
Sbjct: 2792 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGT 2851
Query: 172 DSQLGV-PGLPVVQPCPV 188
+ +LG+ V +P P+
Sbjct: 2852 NGRLGLGDDSNVCEPKPI 2869
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 18/150 (12%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
+LP P M+ +EG N + N+EL + + D +++Q
Sbjct: 3724 SLPKPFCLEVTKQINEMITDKEG---NTKDHENHELFKQEH-------------DEQLLQ 3767
Query: 96 IANGGYHSLALTDDGK--VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
N L+ DG ++ WG+ GQLG K+P++ E+L+ + G
Sbjct: 3768 WLNRRPEDWMLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQ 3827
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGVPGLPVV 183
T AVT GK+Y G +LG+ G V
Sbjct: 3828 TLFAVTADGKVYATGYGAVGRLGIGGTDSV 3857
>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
Length = 1024
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 107/192 (55%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + + P V+ L VP+A +S G + L+ G
Sbjct: 158 ELFAWGQN-LHGQLGVG-----RKFPSTTTPQIVEHLAGVPLAQISAGEAHSTALSMSGN 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + ++ +A GG HS LT DG +F++G G
Sbjct: 212 IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGK 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ KD QLG
Sbjct: 272 HGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
Query: 179 GL-PVVQPCPVE 189
G + P PV+
Sbjct: 332 GTRDQLMPLPVK 343
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 85/144 (59%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG++E G+LGLG ++ PS ++ L V V+CGG + +LT++G L
Sbjct: 212 IYSWGKNEC-GQLGLGHTESKDD------PSLIEGLDNQKVEFVACGGSHSALLTQDGLL 264
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA + +LG +P L+ LV R+ QIA G +H+LA D GKVFS+G G
Sbjct: 265 FTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T++Q +P+ ++ + E
Sbjct: 325 DGQLGNGGTRDQLMPLPVKVSSSE 348
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 15/156 (9%)
Query: 25 AGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+GG P +K + + +V G ++L+ +G+ + + S L R + +
Sbjct: 82 SGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHL-RFESI------ 134
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALA 141
L + +IIQI G YHSLAL+ G++F+WG HGQL G F + P ++E LA
Sbjct: 135 ----LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFP-STTTPQIVEHLA 189
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ I+ G + S A++ G +Y WG + QLG+
Sbjct: 190 GVPLAQISAGEAHSTALSMSGNIYSWGKNECGQLGL 225
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEG 58
E++ G + G LGLG + E P ++ +L +A +S G G ++ T EG
Sbjct: 66 EIFVLGTN-CSGCLGLGDAQSTIE------PRRLDSLSGKKIACLSYGSGPHVVLATTEG 118
Query: 59 QLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+++ WG N+ +LG G G P ++ NL + ++I++A G YHSL LT DG+VF+WGY
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 118 GGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G T NQ +P + L ++ V +IACG S AV + G++Y+WG + QLG
Sbjct: 179 NNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238
Query: 177 V 177
+
Sbjct: 239 L 239
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G GP IP +V V ++CG +M + + G
Sbjct: 172 EVFAWGYNNS-GQVGSGP------TANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 225 EVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + + +
Sbjct: 285 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 344
Query: 178 PGL 180
P L
Sbjct: 345 PHL 347
>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
Length = 526
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 102/187 (54%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 35 LYTTVNDEVFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIACLSYGSGPHIV 88
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + +I++A G YHSL LT DG+
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKHVIEVACGSYHSLVLTSDGE 148
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V +L ++ V +IACG S AV + G++Y+WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYN 208
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 209 GNGQLGL 215
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 11/183 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA--LPVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P L L VR+ ++A G H+L LTD+G+V++WG
Sbjct: 201 EVYVWGYNGNGQLGLGSSGNQSTPCRLA-LQGVRVQRVACGYAHTLVLTDEGQVYAWGAN 259
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 260 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVL 319
Query: 178 PGL 180
P L
Sbjct: 320 PHL 322
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG E S P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFSWGQNK-HGQLGLG-----FELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +++ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+QIA G YHSLAL+ +VFSWG HGQLG F ++Q P +I++L
Sbjct: 135 TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTD 113
Query: 121 GQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG T+ KVP I++L D + IACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL 171
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+PG
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPG 120
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 2/144 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG-GWKPKLLPNLVDVRIIQIANG 99
+ +SCG ++ +++EG +++WG S +LG G+ + PK + L + +IIQI+ G
Sbjct: 86 IVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCG 145
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
+HSLAL++DG+VFSWG GQLG S NQ P ++++L + + GGS S A+
Sbjct: 146 NFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFAL 205
Query: 159 TEKGKLYMWGNAKDSQLGVPGLPV 182
+ G ++ WG QLG P+
Sbjct: 206 SMSGTVFAWGKNNAGQLGFKSDPM 229
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D EG+LG G N + P K+ L + +SCG F ++ L+E+G++
Sbjct: 105 IYSWG-DGSEGQLGTG-----NLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRV 158
Query: 61 WNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG N +LG G ++ P+L+ +L + ++Q+ GG S AL+ G VF+WG
Sbjct: 159 FSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNN 218
Query: 120 HGQLGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG + P + +L + V +I+CG +A +++ G +Y +G+ QLG
Sbjct: 219 AGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLG 277
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V VSCG T+ L E+G L + G N +LGR + + + +L I+ I+ G
Sbjct: 36 VQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGR--KSNNSSIEQISSLEAQTIVDISCGT 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+A++D+G ++SWG G GQLG + + P I L + + I+CG S A++
Sbjct: 94 NHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALS 153
Query: 160 EKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
E G+++ WG K QLG+ + Q P
Sbjct: 154 EDGRVFSWGQNKCGQLGLGSQIINQATP 181
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 87/153 (56%), Gaps = 10/153 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG+++ G+LGLG ++ + P VK+L +P+ V+ GG + L+ G +
Sbjct: 158 VFSWGQNKC-GQLGLG-----SQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTV 211
Query: 61 WNWGANSNYELG-RGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG N+ +LG + D + G +KP + +L ++ + I+ G H+ L+ DG V+++G
Sbjct: 212 FAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDD 271
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
HGQLG + VP IE A + V+ +ACG
Sbjct: 272 THGQLGQNSGNQTSVPQKIEDYAGQ-VSQVACG 303
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 4/170 (2%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S+P +V+ L V ++ G F + L E+G+L WG N +LG GD
Sbjct: 180 PGDIKQISVPVRVQGLE-NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSH 238
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ--LGHSFTQNQKVPMVIEA 139
P + L D+ ++ IA GG+HS ALTD G+V+ WG G HG+ LG + ++ VP +
Sbjct: 239 PVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNL 298
Query: 140 LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
LA+E + ++CGG+ S A+T G+++ +G +LG G V P+E
Sbjct: 299 LAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY-GRKVTTGQPLE 347
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG+ + +LG G ++ L + + +G +SLA+ DDG +F+WG+ G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 123 LGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LGH T+ + +P ++ALA+ +T A GG AV ++G+ Y WG + Q G
Sbjct: 70 LGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+ WG E +G+LG+G A V+AL P V +V G ++ + ++G +
Sbjct: 7 IIAWGSGE-DGQLGIGTNEEKEWA------CVVEALEPYSVRSVVSGSRNSLAICDDGTM 59
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N LG P + L +V+I Q A GG+H LA+ D G+ ++WG
Sbjct: 60 FTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 120 HGQLGHSFTQNQ-----KVPMVI--EALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+GQ G +++ + +VI V +A GG+ S +T +G ++ WG
Sbjct: 120 YGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
+ +WG G GQLG + ++ V+EAL V + G S A+ + G ++ WG +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 172 DSQLG 176
LG
Sbjct: 67 RGTLG 71
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG E + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----ECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG +G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG Q Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
[Ornithorhynchus anatinus]
Length = 721
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 80/128 (62%), Gaps = 2/128 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDG 110
+V T EG+++ WG N+ +LG G G P + NLV+ +++++A G +HSL LT DG
Sbjct: 282 VVATAEGEVYTWGHNAYSQLGNGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSLVLTSDG 341
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+V++WGY GQ+G T NQ +P V L ++ T+IACG S AV E G++Y+WG
Sbjct: 342 EVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGY 401
Query: 170 AKDSQLGV 177
+ QLG+
Sbjct: 402 NGNGQLGL 409
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVPVAA-VSCGGFFTMVLTEEG 58
E+Y WG + G++G G IP +V + L +A ++CG +M + E G
Sbjct: 342 EVYAWGYNNS-GQVGSG------STANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESG 394
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++ G H+L LTD+G++++WG
Sbjct: 395 EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWGAN 454
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P+ + D + AC TSAA T+ G +YMWG + + +
Sbjct: 455 SYGQLGTGNKSNQSYPIPVPVEKDRIIEIAACHSAHTSAAKTQSGHVYMWGQCRGQSVTL 514
Query: 178 PGL 180
P L
Sbjct: 515 PHL 517
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+YTWG + +LG G G + + V V+CG ++VLT +G++
Sbjct: 289 EVYTWGHN-AYSQLG----NGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSLVLTSDGEV 343
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI-IQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N++ ++G G P+ + + + +I IA G S+A+ + G+V+ WGY G
Sbjct: 344 YAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNG 403
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV-- 177
+GQLG + NQ P I AL V + CG + + +T++G+LY WG QLG
Sbjct: 404 NGQLGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTGN 463
Query: 178 ---PGLPVVQPCPVE 189
P+ P PVE
Sbjct: 464 KSNQSYPI--PVPVE 476
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 77 VGGWKPKLLPNLVDVRIIQIA----NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
VG W L + ++++I+ A + G L T++ +VF G G LG QN
Sbjct: 198 VGKWPIFALCSPEELKLIRQACVFGSAGNEVLYATENDEVFVLGTNCSGCLGTGDVQNTI 257
Query: 133 VPMVIEALADEFVTHIACGGSTSAAV-TEKGKLYMWGNAKDSQLG 176
P I++L + +T ++ G V T +G++Y WG+ SQLG
Sbjct: 258 EPRRIDSLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLG 302
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG E S P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFSWGQNK-HGQLGLG-----FELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +++ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTH 147
D++I+QIA G YHSLAL+ +VFSWG HGQLG F + Q P +I++L T
Sbjct: 135 TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 122 QLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T+ +VP I++L D + IACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL 171
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+PG
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPG 120
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 7/189 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 572 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ +I++ G S+ALT DG+V+SWG G
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGD 686
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LG ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 687 NQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 745
Query: 180 LPVVQPCPV 188
L V +P P
Sbjct: 746 LRVTKPEPT 754
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3175 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3227
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3287
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3288 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
++Y+ G + GRLGLG +G + IP ++ AL V AV GG LT +
Sbjct: 3013 KVYSCG-EATNGRLGLG-----MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3066
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG + +LG R+ KP+L+ L RI IA G HS ALT G++++WG
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3126
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG--GSTSAAVTEKGKLYMWGNAKDSQL 175
G +G+LGH Q P +++ L V +ACG + + A+T++G ++ WG+ +L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 176 G 176
G
Sbjct: 3187 G 3187
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 99/179 (55%), Gaps = 4/179 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG+
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGL 692
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4031 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4090
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 4091 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDI 4150
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4151 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2961 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
+++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3014 VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3133
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCG--GFFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3120 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGTRDAQTLALTDE 3172
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3233 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4113 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4165
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4166 DTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4225
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4226 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4284
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4168 VWSWG-DGDYGKLGRGGSDGSK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4220
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4280
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4281 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 739 QCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V V+C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4073
Query: 176 G 176
G
Sbjct: 4074 G 4074
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2944 LIRKKTPGLESTA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3003 KSLFAVTVEGKVYSCGEATNGRLGL 3027
>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1598
Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 95/191 (49%), Gaps = 20/191 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+LY +G E GRLG G E G PS+V + AAV+CG T+ LT +G++
Sbjct: 1325 DLYGFGWGEA-GRLGTG------ETGSSLYPSRVDLRNI--AAVACGREHTLALTSKGRV 1375
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ +GA LG G P L+ L + I+ IA G HS AL+ DG+V +WG+G
Sbjct: 1376 FAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSCALSRDGEVLTWGFGSS 1435
Query: 121 GQLGHSFTQNQKVPMV---------IEALADEF--VTHIACGGSTSAAVTEKGKLYMWGN 169
G LGH N +P + +E L + VT +ACG + A T G LY WG+
Sbjct: 1436 GALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSYHTLAATNDGVLYGWGD 1495
Query: 170 AKDSQLGVPGL 180
A QLG L
Sbjct: 1496 AAAGQLGAEHL 1506
Score = 76.6 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 15/144 (10%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL------PN----LVD 90
+ A++ G + L+ +G++ WG S+ LG G R P L+ PN + D
Sbjct: 1408 IVAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHD 1467
Query: 91 VRII-QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV----PMVIEALADEFV 145
+ ++ +A G YH+LA T+DG ++ WG GQLG Q + P I +
Sbjct: 1468 ISVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGI 1527
Query: 146 THIACGGSTSAAVTEKGKLYMWGN 169
IACG TSA + +G+L+MWG+
Sbjct: 1528 RGIACGTFTSAVCSTQGQLFMWGS 1551
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM-------VIEALADEF 144
R++QIA G H+ +TDD ++++G+G G+LGH ++ P+ +I A EF
Sbjct: 1245 RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEF 1304
Query: 145 --VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V ++CG + VT G LY +G + +LG
Sbjct: 1305 GGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLG 1338
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 33 KVKALPVP---VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR--------VGGWK 81
++ + P P V ++CG T ++T++ L+ +G LG G VG +
Sbjct: 1235 RMVSFPPPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFT 1294
Query: 82 PKLLPNLVDVR-IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+ V+ ++ ++ G H++ +T +G ++ +G+G G+LG T + P ++
Sbjct: 1295 SLIAAEGVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVDL- 1353
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ +ACG + A+T KG+++ +G +LG
Sbjct: 1354 --RNIAAVACGREHTLALTSKGRVFAFGAGFGGRLG 1387
Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 21/115 (18%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP--VAAVSCGGFFTMVLTEEGQ 59
LY WG D G+LG + LS P +++ LP + ++CG F + V + +GQ
Sbjct: 1490 LYGWG-DAAAGQLG-AEHLSAQDLVVLS-PKEIR-LPTSSGIRGIACGTFTSAVCSTQGQ 1545
Query: 60 LWNWGANS-------NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
L+ WG+ + + E RVG L + QIA G YH++A+T
Sbjct: 1546 LFMWGSPAAGNGAPLDVEDAHVKRVG--------VLGEFEFSQIACGAYHAVAIT 1592
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 99/182 (54%), Gaps = 14/182 (7%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTE 56
+LY G EG GRLGLG + P +V L V AV GG M LT
Sbjct: 3294 KLYACG--EGTNGRLGLG------HNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTL 3345
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+G++++WG + +LG G+R+ KPKL+ L RI IA G HS A+T G++++WG
Sbjct: 3346 DGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWG 3405
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQ 174
G +G+LGH Q P ++ ALAD V +ACG + + +TE+G ++ WG+ +
Sbjct: 3406 LGEYGRLGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGK 3465
Query: 175 LG 176
LG
Sbjct: 3466 LG 3467
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG RG +E G SIP +V+ L V V + CG F++ LT+ G++
Sbjct: 3455 VFSWG-DGDFGKLG----RGGSE--GCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEV 3507
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP + L ++I +A G H LA+TD G+V++WG H
Sbjct: 3508 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDH 3567
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P ++ L FV +ACG S S A
Sbjct: 3568 GQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVA 3604
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + L P V AL V V+CG T+ LTEE
Sbjct: 3400 ELYTWGLGE-YGRLGHG-----DNCTQLK-PKLVTALADHRVVQVACGSRDAQTLCLTEE 3452
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L V ++QI G SLALT G+V++WG
Sbjct: 3453 GLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGK 3512
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I+ L + V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3513 GDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3571
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 87/150 (58%), Gaps = 7/150 (4%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S+ S++K P+ +A S F +++++G+L+ G +N LG G PK +P L
Sbjct: 3269 SVLSQLK--PIHIAGGSKSLF---IVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPIL 3323
Query: 89 VD--VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVT 146
V+ + + +GG H++ALT DGKVFSWG G G+LGH + P +IE L + +
Sbjct: 3324 SQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIR 3383
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
IACG S SAA+T G+LY WG + +LG
Sbjct: 3384 DIACGSSHSAAITSSGELYTWGLGEYGRLG 3413
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 87/155 (56%), Gaps = 5/155 (3%)
Query: 27 GLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
++ P+ V++L + AV+ GG + L+ +G++++WG + +LG G+R +PK
Sbjct: 4449 SVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPK 4508
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
L+ L + +I IA G HS +T G V +WG G +G+LGH +++Q P ++EAL
Sbjct: 4509 LIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGY 4568
Query: 144 FVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
IACG + + +T+ ++ WG+ +LG
Sbjct: 4569 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4603
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT G +
Sbjct: 4591 VWSWG-DGDYGKLGRGG------SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSV 4643
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G+ +PK + L +II IA G H +A +D G+VF+WG
Sbjct: 4644 YTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDE 4703
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++++L + + + CG + + A++
Sbjct: 4704 GQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4742
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V V V+C +LT GQ+ + ++ + PK + L V I+Q+A
Sbjct: 582 VQVRQVACSETSIYILTTTGQVLSLQHSNCHT------PDTTAPKPIEGLESVNIVQLAA 635
Query: 99 G--GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
G H LALT G VFSWG G G+LGH T ++ +P I ALA+ VT + CG S SA
Sbjct: 636 HCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSA 695
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
A+T G+LY WG +LG
Sbjct: 696 AITAAGELYTWGRGTYGRLG 715
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
A C G + LT G +++WG LG GD P + L + ++ + G +
Sbjct: 634 AAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSY 693
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA--CGGSTSAAVTE 160
S A+T G++++WG G +G+LGH ++++ +P +++ L + V H+A CG + S VT+
Sbjct: 694 SAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTD 753
Query: 161 KGKLYMWGNAKDSQLG 176
G +Y WG+ +LG
Sbjct: 754 TGIVYAWGDGDFGKLG 769
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG EG GRLG G + IP+++ AL V V CG ++ +T G+
Sbjct: 650 DVFSWGNGEG-GRLGHG------DTSSKDIPTRIVALAERQVTGVFCGSSYSAAITAAGE 702
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGY 117
L+ WG + LG G+ P ++ L R+I +A G HSL +TD G V++WG
Sbjct: 703 LYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGD 762
Query: 118 GGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMW 167
G G+LG+ VP+ IE + + G S A+ G +Y W
Sbjct: 763 GDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSW 813
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+ TWG+ GRLG G + P V+AL ++CG T+ +T++
Sbjct: 4536 HVLTWGKGR-YGRLGHGDSEDQLQ------PKLVEALLGYRAIDIACGSGDAQTLCITDD 4588
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + + ++ G S+ALT G V++WG
Sbjct: 4589 DNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGK 4648
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH T + + P + AL + + IA G A ++ G+++ WG+ + QLG
Sbjct: 4649 GDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLGD 4708
Query: 178 PGLPVVQ 184
+ +Q
Sbjct: 4709 GTVSAIQ 4715
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 13/183 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
ELYTWGR GRLG G + +P+ V+ L V A+ CG ++ +T+
Sbjct: 702 ELYTWGRGT-YGRLGHGNSEDKH------LPTIVQVLKQQRVIHVALGCGDAHSLCVTDT 754
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKL--LPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
G ++ WG +LG G G P LP D +++ +G + S+AL DG V+SW
Sbjct: 755 GIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSD-GAVKVFSGSHFSVALGRDGTVYSW 813
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G G+LGH +++ P I+AL + + +A G + A+T G+LY WG QL
Sbjct: 814 GKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQL 873
Query: 176 GVP 178
P
Sbjct: 874 CPP 876
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 63 WGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N +LG +G +V P L ++ I IA G ++ DGK+++ G G +
Sbjct: 3246 WGLNDKEQLGGLKGSKVK--LPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTN 3303
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG N P + L+ V +A GG + A+T GK++ WG +D +LG
Sbjct: 3304 GRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLG 3361
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D P L +R IQIA G A+T DGK+++ GYG
Sbjct: 4379 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA 4438
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T + P ++E+L + +A GG A++ G+++ WG +D +LG
Sbjct: 4439 GGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4497
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG E S P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFSWGQNK-HGQLGLG-----FELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +++ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTH 147
D++I+QIA G YHSLAL+ +VFSWG HGQLG F + Q P +I++L T
Sbjct: 135 TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 122 QLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T+ +VP I++L D + IACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL 171
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+PG
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPG 120
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis
niloticus]
Length = 4833
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 4/169 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGR GRLG G + + K L V A G T+ +TE GQ+
Sbjct: 562 ELYTWGRG-NYGRLGHGSSEDQTTP---MVVTAFKGLKVVDVACGSGDAQTLAVTENGQV 617
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG +LGRG G PKL+ L D+ I+++ G S+ALT DG+V++WG G +
Sbjct: 618 WSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDN 677
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+LGH ++ + P ++++L + V +A G + A+T+ G++ WG+
Sbjct: 678 QRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGS 726
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
++Y G + GRLGLG +G + IP ++ AL + AV GG M LT +
Sbjct: 3009 KIYACG-EATNGRLGLGLS-----SGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVD 3062
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG + +LG R+ KP+L+ L RI IA G HS A+T G+++SWG
Sbjct: 3063 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGL 3122
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQL 175
G +G+LGH Q P +++ L V +ACG + + A+T++G ++ WG+ +L
Sbjct: 3123 GEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKL 3182
Query: 176 G 176
G
Sbjct: 3183 G 3183
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N +P ++ L V + CG F++ LT+ G +
Sbjct: 3171 VFSWG-DGDFGKLGRGGSEGCN------VPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3223
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3224 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3283
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3284 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3322
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2957 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3009
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L + I ++A +GG H++ALT DGKVFSWG
Sbjct: 3010 IYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWG 3069
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3070 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLG 3129
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L V ++ IA GG H
Sbjct: 4042 AVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAH 4101
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S +T G++F+WG G +G+LGH +++Q P +++AL V +ACG + + +T+
Sbjct: 4102 SACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTD 4161
Query: 161 KGKLYMWGNAKDSQLG 176
++ WG+ +LG
Sbjct: 4162 DDMVWSWGDGDYGKLG 4177
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 14/183 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-----KALPVPVAAVSCGGFFTMVLT 55
E+++WG +G GRLG G + L P + K V V+CG ++ +T
Sbjct: 506 EVFSWGCGDG-GRLGHG------DTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAAIT 558
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVF 113
+G+L+ WG + LG G P ++ ++++ +A +G +LA+T++G+V+
Sbjct: 559 ADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVW 618
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
SWG G +G+LG + K P ++E L D + + CG S A+T+ G++Y WG +
Sbjct: 619 SWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQ 678
Query: 174 QLG 176
+LG
Sbjct: 679 RLG 681
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P V+ L + + V CG F++ LT++GQ
Sbjct: 616 QVWSWG-DGDYGKLGRGG------SDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQ 668
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N LG G PKLL +L +++ +A G H LALTDDG+V SWG
Sbjct: 669 VYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSND 728
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + N+K P + L + + I+CG G+ + W ++ + +G
Sbjct: 729 KLQHFDTLFSNKKQPKALPGLNSKHIVGISCG---------PGQSFAWSSSSEWSVGKRV 779
Query: 180 LPVVQPCPV 188
VV CP+
Sbjct: 780 PFVVDVCPM 788
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
EL+TWG+ GR G LG G ++ P V AL V V+CG T+ LT+
Sbjct: 4110 ELFTWGK----GRYGRLGHGDSEDQLK----PKLVDALQGHRVIDVACGSGDAQTLCLTD 4161
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4162 DDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4221
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4222 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4281
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELY+WG E GRLG G P VK L V V+CG T+ LT+E
Sbjct: 3116 ELYSWGLGE-YGRLGHGDNTTQLR------PKLVKVLLGHRVIQVACGSRDAQTLALTDE 3168
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3169 GFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3228
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3229 GDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3287
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G IP K+ +L + V V CG F++ LT+ G +
Sbjct: 4165 VWSWG-DGDYGKLGRGG------SDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4217
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4218 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4277
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + + +ACG + + A
Sbjct: 4278 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4314
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRIIQIANGGYHSLALT 107
+ L+ G++++WG LG GD +PK++ ++ +A G +S A+T
Sbjct: 499 LALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAAIT 558
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLY 165
DG++++WG G +G+LGH +++Q PMV+ A V +ACG + + AVTE G+++
Sbjct: 559 ADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVW 618
Query: 166 MWGNAKDSQLG 176
WG+ +LG
Sbjct: 619 SWGDGDYGKLG 629
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P+ A+S G +V +E+G L + + Y + + P L+ L +I+++A
Sbjct: 433 PIQCKALSSLGVTQIVCSEKGFLILSSSGAVY--SQNYKSTTLAPMLIHVLSSRKIVKLA 490
Query: 98 N--GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACG 151
G H LAL+ +G+VFSWG G G+LGH T + P +I A + V H+ACG
Sbjct: 491 AHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACG 550
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLG 176
+ SAA+T G+LY WG +LG
Sbjct: 551 STYSAAITADGELYTWGRGNYGRLG 575
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3951 GTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4010
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4011 GAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4070
Query: 176 G 176
G
Sbjct: 4071 G 4071
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
A T KVF WG QLG KVP E L+ V +A G + AVT +GK+
Sbjct: 2951 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKI 3010
Query: 165 YMWGNAKDSQLGV 177
Y G A + +LG+
Sbjct: 3011 YACGEATNGRLGL 3023
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG E + P +K+L +P A ++ GG + VLT G
Sbjct: 157 EVFSWGQNK-YGQLGLG-----YEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I+ G H+ ALT +G VF++G GG
Sbjct: 211 VFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG+
Sbjct: 271 YGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGM 329
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + VSCG T+ L ++GQ++ WG + +LG G P+ + +L
Sbjct: 75 PEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTH 147
D++I+Q+A G +HSLAL+ +VFSWG +GQLG + + Q P +I++L
Sbjct: 135 SDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IA GG+ S +T G ++ WG K QLG+
Sbjct: 195 IAAGGAHSFVLTLSGAVFGWGRNKFGQLGL 224
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G +P+ + L I+ ++ G H+LAL D G+V++WG+
Sbjct: 57 TCGCN---DLGQLGHEKSRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG S T+ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGL 171
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG A D QLG+ G
Sbjct: 64 GQLGHE--KSRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSG 120
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + +SCG T LT+EG +
Sbjct: 211 VFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGMGTTSNRKSPFPVK 342
>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
[Ailuropoda melanoleuca]
Length = 1035
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 102/178 (57%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + P V+ L VP+ +S G +M L+ G
Sbjct: 169 ELFAWGQN-LHGQLGVG-----RLFASIPTPQAVEHLSGVPLVQISAGKAHSMALSMSGN 222
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G G P L+ L + ++ +A GG H+ LT DG VF++G G
Sbjct: 223 VYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTFGAGK 282
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ TQN+ P ++ LA VT IACG T A V++ GK++ +G+ K+ QLG
Sbjct: 283 YGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLG 340
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 80/137 (58%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N + +LG G P+ + +L V ++QI+ G
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 210
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ G V+SWG GQLG T + P +IE L ++ V +ACGGS +A +T
Sbjct: 211 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT 270
Query: 160 EKGKLYMWGNAKDSQLG 176
G ++ +G K QLG
Sbjct: 271 TDGLVFTFGAGKYGQLG 287
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 82/144 (56%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WGR++ G+LGLG G + PS ++ L V ++CGG T +LT +G +
Sbjct: 223 VYSWGRNDL-GQLGLGHTDGED------FPSLIETLDNQQVEFLACGGSHTALLTTDGLV 275
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA +LG +P+L+ L R+ QIA G H+LA D GKVFS+G G
Sbjct: 276 FTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGK 335
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T NQ +P+ ++ ++E
Sbjct: 336 EGQLGNGGTHNQLIPLPMKLPSNE 359
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 13/140 (9%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
+ + +V G ++L+ +G+ + + N + E R + L + IIQIA
Sbjct: 109 MKIHSVDQGAEHMLILSSDGKPFEY--NYSIEHARFQCI----------LQEKSIIQIAC 156
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
G YHSLAL+ G++F+WG HGQLG + P +E L+ + I+ G + S A
Sbjct: 157 GDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAHSMA 216
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
++ G +Y WG QLG+
Sbjct: 217 LSMSGNVYSWGRNDLGQLGL 236
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
++I + G H L L+ DGK F + Y + H+ Q L ++ + IAC
Sbjct: 109 MKIHSVDQGAEHMLILSSDGKPFEYNYS----IEHARFQC--------ILQEKSIIQIAC 156
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
G S A+++ G+L+ WG QLGV L P P
Sbjct: 157 GDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTP 193
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 98/167 (58%), Gaps = 5/167 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLG+G G + ++ ++ + V AV+ GG + L+ EG +++WG + +L
Sbjct: 3959 GRLGIG---GTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4015
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G G+R+ +PKL+ L+ I+ +A GG+HS A+T G +++WG G +G+LGH +++Q
Sbjct: 4016 GHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ 4075
Query: 132 KVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
P ++EAL D V +ACG + + VT+ ++ WG+ +LG
Sbjct: 4076 LTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLG 4122
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 99/178 (55%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTM-VLTEEGQL 60
+Y WG ++ + LG +G + S K PV +A GG T+ V+++EG+L
Sbjct: 2911 VYVWGLNDKDQ---LGGLKGSKIKLPVYSESLSKLKPVHIA----GGSKTLFVVSQEGKL 2963
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ G +N LG GD +PK +P L I ++A +GG H+LALT DG+VFSWG G
Sbjct: 2964 YACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEG 3023
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LGH + P +IE+L + + +ACG SAA+T G+LY WG + +LG
Sbjct: 3024 EDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRLG 3081
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 98/179 (54%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY G EG GRLGLG E + S+ + AV GG + LT++G+
Sbjct: 2962 KLYACG--EGTNGRLGLGDDGNACEPKPIPFLSQ---YVIKKVAVHSGGKHALALTQDGR 3016
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG + +LG G+ KP+L+ +L RI +A G HS A+T G++++WG G
Sbjct: 3017 VFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGE 3076
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+G+LGH T Q P ++++L + V +ACG + + A+T G +Y WG+ +LG
Sbjct: 3077 YGRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLG 3135
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 95/179 (53%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELYTWG E GRLG G + P V++L V V+CG TM LT +
Sbjct: 3068 ELYTWGLGE-YGRLGHG------DTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTAD 3120
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G + P L+ L + ++QI G SLALT G+V++WG
Sbjct: 3121 GSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGK 3180
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3181 GDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3239
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG G + G P V L + V + CG F++ LT+ G++
Sbjct: 3123 VYSWG-DGDFGKLGRGG------SDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEV 3175
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G+ KP L+ L ++I +A G H LA+TD G+V++WG H
Sbjct: 3176 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDH 3235
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T K P ++ L D V ++CG S S A
Sbjct: 3236 GQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3272
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V + A G + LTE+ +++WG LG GDR +PKL+ +LVD I IA
Sbjct: 506 VAMIASHPDGKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIAC 565
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSA 156
G +S AL+ +G++++WG G +G+LGH + + VP ++ AL + ++ACG S +
Sbjct: 566 GSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTL 625
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
VT G ++ WG+ +LG
Sbjct: 626 CVTASGIVFSWGDGDYGKLG 645
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 17/179 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT G +
Sbjct: 4110 VWSWG-DGDYGKLGRGG------SDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSI 4162
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L +II IA G H +A +D G+VF+WG
Sbjct: 4163 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDE 4222
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG T + P ++ AL + +T +ACG + + A W K +Q +P
Sbjct: 4223 GQLGDGTTCALQRPRLVHALQGKKITRVACGSAHTLA---------WSTMKATQSRMPA 4272
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG +G GRLG G E P +++L + ++CG ++ L+ G+L
Sbjct: 527 VYSWGNGDG-GRLGHGDRTWYEE------PKLIESLVDKNITFIACGSTYSAALSSNGEL 579
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G+ P L+ L I+ +A +G +L +T G VFSWG G
Sbjct: 580 YTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDG 639
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG K P +++ L D V + CGG SAA+T G++Y WG + +LG
Sbjct: 640 DYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG 697
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 13/194 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G + + +P+ V AL + V+CG T+ +T
Sbjct: 578 ELYTWGRG-NYGRLGHG------NSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTAS 630
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G PK++ L+D+ + ++ GG S ALT G+V++WG
Sbjct: 631 GIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGK 690
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG- 176
G +LGH ++ + P IEAL + V + G A+TE +Y WG Q+
Sbjct: 691 GEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQIDP 750
Query: 177 VPGLPVVQP--CPV 188
G V +P CP
Sbjct: 751 ALGTIVSEPTLCPT 764
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGG--FFTMVLTEE 57
LYTWG+ GR G LG G ++ P V+AL V V+CG T+ +T++
Sbjct: 4056 LYTWGK----GRYGRLGHGDSEDQL----TPKLVEALQDYKVIDVACGSGDAQTLCVTDD 4107
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + +I++ G S+ALT G +++WG
Sbjct: 4108 DNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGK 4167
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P + AL + + IA G A ++KG+++ WG+ + QLG
Sbjct: 4168 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4226
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWN--WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
+ + C M+L+ G ++ +G+ + Y RV G+ K V +I
Sbjct: 464 IKQLCCTERALMILSTSGNVYMMYYGSETQYP----QRVYGFSDKF------VAMIASHP 513
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H LALT+D V+SWG G G+LGH + P +IE+L D+ +T IACG + SAA+
Sbjct: 514 DGKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAAL 573
Query: 159 TEKGKLYMWGNAKDSQLG 176
+ G+LY WG +LG
Sbjct: 574 SSNGELYTWGRGNYGRLG 591
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N G P V K L + VA V CGG F+ LT G++
Sbjct: 633 VFSWG-DGDYGKLGRG---GCN---GSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEV 685
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG Y LG G+ PK + L ++ ++ G H LALT+D V+ WG +
Sbjct: 686 YTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDY 745
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ+ + P + L+ + V + CG + S A
Sbjct: 746 GQIDPALGTIVSEPTLCPTLSGKNVIGLVCGPTQSFA 782
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +L +R +Q+ G A+T DGKV++ GY
Sbjct: 3896 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 3955
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T + +P ++E++ FV +A GG A++ +G +Y WG D +L
Sbjct: 3956 GAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4015
Query: 176 G 176
G
Sbjct: 4016 G 4016
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%)
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
D I+Q + V+ WG QLG K+P+ E+L+ HIA
Sbjct: 2889 DWEIVQEQASSQRGVETPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIA 2948
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G T V+++GKLY G + +LG+
Sbjct: 2949 GGSKTLFVVSQEGKLYACGEGTNGRLGL 2976
Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G ++ WG+ GQLG K+P++ E+L+ + G T AVT GK+Y G
Sbjct: 3896 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 3955
Query: 170 AKDSQLGVPGL-PVVQPCPVE 189
+LG+ G V+ P +E
Sbjct: 3956 GAVGRLGIGGTDSVMMPTLLE 3976
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG E S P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFSWGQNK-HGQLGLG-----FELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +++ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTH 147
D++I+QIA G YHSLAL+ +VFSWG HGQLG F + Q P +I++L T
Sbjct: 135 TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTD 113
Query: 121 GQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG T+ +VP I++L D + IACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL 171
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+PG
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPG 120
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|330842136|ref|XP_003293040.1| hypothetical protein DICPUDRAFT_157834 [Dictyostelium purpureum]
gi|325076672|gb|EGC30440.1| hypothetical protein DICPUDRAFT_157834 [Dictyostelium purpureum]
Length = 1404
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ-IANG 99
+ VS G + ++LTE G +W WG N+N +LG +P +V+++ ++ IA G
Sbjct: 358 IKQVSLGNYHIVILTESGNVWTWGLNTNGQLGYAQDANSLN---VPRMVEIKCVKTIATG 414
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
++ ALT+ G+++ WG HG+LG T +++VP ++ L +E VT IAC + SA T
Sbjct: 415 IRNTAALTEWGELYMWGINEHGELGLGDTNDRRVPTRVQRLKNEIVTVIACSSTHSACYT 474
Query: 160 EKGKLYMWGNAKDS 173
E GK+Y+WG ++
Sbjct: 475 ESGKMYLWGQCDEA 488
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACG 151
I Q++ G YH + LT+ G V++WG +GQLG++ N VP ++E + V IA G
Sbjct: 358 IKQVSLGNYHIVILTESGNVWTWGLNTNGQLGYAQDANSLNVPRMVEI---KCVKTIATG 414
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLGV 177
+AA+TE G+LYMWG + +LG+
Sbjct: 415 IRNTAALTEWGELYMWGINEHGELGL 440
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++TWG + G+LG +A L++P V+ V ++ G T LTE G+L+
Sbjct: 377 VWTWGLNT-NGQLGYA-----QDANSLNVPRMVEI--KCVKTIATGIRNTAALTEWGELY 428
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH- 120
WG N + ELG GD P + L + + IA HS T+ GK++ WG
Sbjct: 429 MWGINEHGELGLGDTNDRRVPTRVQRLKNEIVTVIACSSTHSACYTESGKMYLWGQCDEA 488
Query: 121 GQLG--------HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
G++ HS+ + + +ACG AA+T+ G+++MW
Sbjct: 489 GKIQTIPTSIPIHSYLDREIKNSNGIYGGGGKIKQLACGEWCIAALTQMGEVFMW 543
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 56/220 (25%), Positives = 83/220 (37%), Gaps = 69/220 (31%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAV-SCGGFFTMVLTEEGQ 59
ELY WG +E G LGLG + +P++V+ L + V +C + TE G+
Sbjct: 426 ELYMWGINE-HGELGLG------DTNDRRVPTRVQRLKNEIVTVIACSSTHSACYTESGK 478
Query: 60 LWNWG-------------------------ANSNY---------ELGRGD---------- 75
++ WG NSN +L G+
Sbjct: 479 MYLWGQCDEAGKIQTIPTSIPIHSYLDREIKNSNGIYGGGGKIKQLACGEWCIAALTQMG 538
Query: 76 -----RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
VGG L L + + I G +H + LTD G+V + G GQLG +
Sbjct: 539 EVFMWNVGGVPAPLRHALENHSVRSIVMGNFHLVCLTDSGEVITIGRNKSGQLGRG--DD 596
Query: 131 QKVPMVIEAL----------ADEFVTHIACGGSTSAAVTE 160
+ VP +++ L ADEFV + G S A+ E
Sbjct: 597 EAVPGIVKQLSFSATGEGLSADEFVVAVHAGEYHSVALVE 636
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 112 VFSWGYGGHGQLGHSFTQN--QKVPMVIEALA--DEFVTHIACGGSTSAAVTEKGKLYMW 167
VFS+G G +G LG +N Q P I+ D+ V IACG + VT+ +LY+
Sbjct: 3 VFSFGLGINGALGLGKLENDCQTTPQKIDYFTEIDKRVKKIACGSYHTVFVTDDEQLYIC 62
Query: 168 GNAKDSQLG 176
G +D + G
Sbjct: 63 GIRRDPKHG 71
>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
Length = 1014
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 110/197 (55%), Gaps = 15/197 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
EL+++G D G+LG + + P ++ AL + V VSCG ++ + +G+
Sbjct: 43 ELHSYG-DNSHGQLGRRDVQRQEQ------PKRIPALETLRVDLVSCGKEHSLAVCYKGR 95
Query: 60 LWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WGA S +LG G+ P+ + L D++IIQ++ G +HSLAL++DG++F+WG
Sbjct: 96 VFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSN 155
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
HGQLG +Q P ++ L +T +A GG+ S A++ G + WG+ + QL +
Sbjct: 156 SHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLAL 215
Query: 178 --PGLPVVQ---PCPVE 189
+PVVQ PC V+
Sbjct: 216 RKKNVPVVQSSKPCSVD 232
Score = 99.0 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG EG+LG+G N IP K+K L + + VSCG ++ L+E+G+L
Sbjct: 96 VFAWGAGS-EGQLGIGEFNEIN-----LIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRL 149
Query: 61 WNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG+NS+ +LG G P+ + L + + Q+A GG HS AL+ G F WG
Sbjct: 150 FTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNS 209
Query: 120 HGQLGHSFTQNQKVPMV-------IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
GQL + + VP+V ++AL + V +I+CG +A +T+ GK++ +G
Sbjct: 210 EGQLA---LRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFGGNSY 266
Query: 173 SQLG 176
QLG
Sbjct: 267 GQLG 270
Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L G+L ++G NS+ +LGR D +PK +P L +R+ ++ G HSLA+ G
Sbjct: 35 SLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEHSLAVCYKG 94
Query: 111 KVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + +P I+ L D + ++CG S A++E G+L+ WG+
Sbjct: 95 RVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGS 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 13/173 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
L+TWG + G+LGLG P++A P +V+ L +P+ V+ GG + L+ G
Sbjct: 149 LFTWGSNS-HGQLGLGK-ECPSQAS----PQRVQFLDGIPLTQVAAGGAHSFALSLSGAS 202
Query: 61 WNWGANSNYELGRGDR----VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L + V KP + L ++ ++ I+ G H+ LT GKVF++G
Sbjct: 203 FGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFG 262
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWG 168
+GQLG+S T ++ P ++E + D V+ I CG T A V GK+ +G
Sbjct: 263 GNSYGQLGYSPTAGKEGPQLVEGI-DGLVSQIDCGSYHTLAYVYTTGKVVSFG 314
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 47/83 (56%)
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
Q A+G HSL L +G++ S+G HGQLG Q Q+ P I AL V ++CG
Sbjct: 27 QAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEH 86
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
S AV KG+++ WG + QLG+
Sbjct: 87 SLAVCYKGRVFAWGAGSEGQLGI 109
>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
Length = 432
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG--GWKPKLLPNLVDVRIIQIAN 98
+A V+ G + T+ +++G+L+ WG+N + +LG D +P+ + L D I Q+A
Sbjct: 156 IADVAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVAC 215
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G YHS+ALT DG+V++WG+G HG+LGH T+++ +P +EAL E ++ I G S+AV
Sbjct: 216 GSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAV 275
Query: 159 TEKGKLYMWG 168
+ GK+++WG
Sbjct: 276 STSGKVFVWG 285
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 10/178 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKAL-PVPVAAVSCGGFFTMVLTEEG 58
+LY WG ++ G+LG + A L++ P ++ L P+ V+CG + +M LT++G
Sbjct: 174 KLYAWGSNK-HGQLG-----HHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDG 227
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG ++ LG G + PK + LV I I G +S A++ GKVF WGYG
Sbjct: 228 EVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAVSTSGKVFVWGYG 287
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LG ++Q P+V++ + +A G +AAV+ G L+ WG+A LG
Sbjct: 288 HFYVLGQGDKKDQLAPVVLDFPTS--IRQLAFGSFHAAAVSHSGMLFTWGHATHGPLG 343
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 17/173 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+YTWG GRLG G +P +V+AL ++++ G ++ ++ G+
Sbjct: 228 EVYTWGFG-AHGRLGHGSTEDE------FMPKRVEALVGENISSIHAGFEYSSAVSTSGK 280
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG Y LG+GD+ K +L P ++D I Q+A G +H+ A++ G +F+WG+
Sbjct: 281 VFVWGYGHFYVLGQGDK----KDQLAPVVLDFPTSIRQLAFGSFHAAAVSHSGMLFTWGH 336
Query: 118 GGHGQLGHSFTQNQKV--PMVIEALAD-EFVTHIACGGSTSAAVTEKGKLYMW 167
HG LGH + P V++A A + +ACG + VT G ++ +
Sbjct: 337 ATHGPLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSF 389
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLG---HS----FTQNQKVPMVIE--ALADEFVT 146
+ +G + L ++SWG HG+ G H+ F QK P +E L + +
Sbjct: 48 LIHGREQKVTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLIK 107
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+ACGG+ S VTE G+L G + QLG+ L
Sbjct: 108 KVACGGAHSMIVTESGRLLTCGLNDNGQLGLGNL 141
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 37 LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL--PNLVDV--- 91
P + ++ G F ++ G L+ WG ++ LG G + P ++ P ++D
Sbjct: 308 FPTSIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHGLK----SPNIILEPTVLDAPAQ 363
Query: 92 --RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
Q+A G H+L +T G VFS+G GG GQLG + P I + + +A
Sbjct: 364 LQNSKQVACGSQHTLVVTGTGDVFSFGLGGQGQLGLGSDLDHYEPKQIPRFVGKSLRQVA 423
Query: 150 CG 151
CG
Sbjct: 424 CG 425
Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPN---EAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
L+TWG G LG G + PN E L P++++ V+CG T+V+T G
Sbjct: 331 LFTWGHAT-HGPLGHGL-KSPNIILEPTVLDAPAQLQ----NSKQVACGSQHTLVVTGTG 384
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSL 104
++++G +LG G + ++PK +P V + Q+A G +H +
Sbjct: 385 DVFSFGLGGQGQLGLGSDLDHYEPKQIPRFVGKSLRQVACGLFHCI 430
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG+++ G+LGLG +E S P +K+L +P A ++ GG + LT G
Sbjct: 141 DIYSWGQNQ-YGQLGLG-----SEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGA 194
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D P LL +L +II I G H+ ALT +G VF++G GG
Sbjct: 195 IFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 254
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG T A V G++Y +G + QLG
Sbjct: 255 YGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 312
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 101/179 (56%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRG-PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+YT G ++ G+LG R P++ G L + + AVSCG T+ L ++GQ+
Sbjct: 39 VYTCGCNDL-GQLGHDKSRKKPDQVGALDAQT--------IVAVSCGEAHTLALNDKGQV 89
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG ++ ++G + P+ + +L D++I+Q+A G +HSLAL+ + ++SWG
Sbjct: 90 FSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYSWGQNQ 149
Query: 120 HGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG S + + P I++LA HIA GG S A+T G ++ WG K QLG+
Sbjct: 150 YGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGL 208
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V CG T+ + ++G ++ G N +LG KP + L I+ ++ G
Sbjct: 20 VRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDK--SRKKPDQVGALDAQTIVAVSCGE 77
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
H+LAL D G+VFSWG+ HGQ+G S ++ +VP I++L D + +ACG S A++
Sbjct: 78 AHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALS 137
Query: 160 EKGKLYMWGNAKDSQLGV 177
++ +Y WG + QLG+
Sbjct: 138 KESDIYSWGQNQYGQLGL 155
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ S P+ +K+L + + CG T LT+EG +
Sbjct: 195 IFGWGRNKF-GQLGL------NDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGV 247
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+LA G+++S+G GG
Sbjct: 248 FTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGG 307
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 308 NGQLGTGSTSNRKSPFTVK 326
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P+ ++ + + G H++ + DDG V++ G GQLGH +++K P + AL
Sbjct: 8 EPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHD--KSRKKPDQVGAL 65
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ + ++CG + + A+ +KG+++ WG+A Q+G+
Sbjct: 66 DAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGL 102
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 98/167 (58%), Gaps = 5/167 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLG+G G + ++ ++ + V AV+ GG + L+ EG +++WG + +L
Sbjct: 4322 GRLGIG---GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4378
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G G+R+ +PKL+ L+ I+ IA GG+HS A+T G +++WG G +G+LGH +++Q
Sbjct: 4379 GHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ 4438
Query: 132 KVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
P ++EAL D V +ACG + + VT+ ++ WG+ +LG
Sbjct: 4439 LTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLG 4485
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTM-VLTEEGQL 60
+Y WG ++ + +LG G + SK+K P+ +A GG T+ V+++EG+L
Sbjct: 3256 VYVWGLNDKD-QLGGLKGSKIKLPVYSEVLSKLK--PIHIA----GGSKTLFVVSQEGKL 3308
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ G +N LG GD +PKL+P L I ++A +GG H+LALT DGK+FSWG G
Sbjct: 3309 YACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEG 3368
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LGH + + P +IE+L + + IACG SAA+T G+LY WG + +LG
Sbjct: 3369 EDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLG 3426
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY G EG GRLGLG E + S+ + AV GG + LT++G+
Sbjct: 3307 KLYACG--EGTNGRLGLGDDSNVCEPKLIPFLSQYM---IKKVAVHSGGKHALALTQDGK 3361
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG + +LG G+ V KP+L+ +L RI IA G HS A+T G++++WG G
Sbjct: 3362 IFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGE 3421
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+G+LGH T Q P ++++L + V +ACG + + A+T G +Y WG+ +LG
Sbjct: 3422 YGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLG 3480
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 95/179 (53%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELYTWG E GRLG G + P V++L V V+CG TM LT +
Sbjct: 3413 ELYTWGLGE-YGRLGHG------DTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTAD 3465
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G + P L+ L + ++QI G SLALT G+V++WG
Sbjct: 3466 GSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGK 3525
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3526 GDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3584
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
PV + A G + LT++ +++WG LG GDRV +PKL+ LVD I IA
Sbjct: 496 PVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIA 555
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STS 155
G +S L+ +G++++WG G +G+LGH + N +P ++ AL V ++ACG S +
Sbjct: 556 CGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQT 615
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
VT G ++ WG+ +LG
Sbjct: 616 LCVTASGIVFSWGDGNYGKLG 636
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 17/179 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G IP K+++L + V V CG F++ LT G +
Sbjct: 4473 VWSWG-DGDYGKLGRGG------SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAI 4525
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L +II IA G H +A TD G+VF+WG
Sbjct: 4526 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDE 4585
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG T + P ++ AL + +T +ACG + + A W K +Q +P
Sbjct: 4586 GQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLA---------WSTMKATQSRMPA 4635
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG G + G P + L + V + CG F++ LT+ G++
Sbjct: 3468 VYSWG-DGDFGKLGRGG------SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEV 3520
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G+ KP L+ L +++ +A G H LA+TD G+V++WG H
Sbjct: 3521 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDH 3580
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T K P ++ L D V ++CG S S A
Sbjct: 3581 GQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3617
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 98/191 (51%), Gaps = 11/191 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G + + IP+ V AL V V+CG T+ +T
Sbjct: 569 ELYTWGRG-NYGRLGHG------NSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTAS 621
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG + +LGRG G PK++ L+D+ + ++ GG S ALT G+V++WG
Sbjct: 622 GIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGK 681
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +LGH ++ + P VIE L + V + G A+TE +Y WG Q+
Sbjct: 682 GEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQID- 740
Query: 178 PGLPVVQPCPV 188
P L + P P
Sbjct: 741 PALGTIVPEPT 751
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGG--FFTMVLTEE 57
LYTWG+ GR G LG G ++ P V+AL V V+CG T+ +T++
Sbjct: 4419 LYTWGK----GRYGRLGHGDSEDQL----TPKLVEALQDYKVIDVACGSGDAQTLCVTDD 4470
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + +I++ G S+ALT G +++WG
Sbjct: 4471 DNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGK 4530
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P + AL + + IA G A T+KG+++ WG+ + QLG
Sbjct: 4531 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4589
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G P V K L + VA V CGG F+ LT G++
Sbjct: 624 VFSWG-DGNYGKLGRGG------CDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEV 676
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG Y LG G+ PK++ L ++ ++ G +H LALT+D V+ WG +
Sbjct: 677 YTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDY 736
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ+ + P + L+ + + +ACG + S A
Sbjct: 737 GQIDPALGTIVPEPTLCPTLSGKNIIGLACGLTQSFA 773
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +L +R +Q+ G LA+T DGKV++ GY
Sbjct: 4259 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGY 4318
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T + VP ++E++ FV +A GG A++ +G +Y WG D +L
Sbjct: 4319 GAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4378
Query: 176 G 176
G
Sbjct: 4379 G 4379
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V+ WG QLG K+P+ E L+ HIA G T V+++GKLY G
Sbjct: 3256 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGT 3315
Query: 172 DSQLGV 177
+ +LG+
Sbjct: 3316 NGRLGL 3321
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G ++ WG+ GQLG K+P++ E+L+ + G T AVT GK+Y G
Sbjct: 4259 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGY 4318
Query: 170 AKDSQLGVPGLPVV 183
+LG+ G V
Sbjct: 4319 GAAGRLGIGGTDSV 4332
>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
1279]
Length = 593
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 94/188 (50%), Gaps = 11/188 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WGR++ G+LGLG P E+ L IP V A++ G T+ L +G +W
Sbjct: 350 VYAWGRND-VGQLGLGTITAPQESPAL-IPGLSD-----VIALAAGDDHTLALKADGSVW 402
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N N ELG GD P + NL V+ IA GG HS+AL DG V +WGY HG
Sbjct: 403 AWGDNPNGELGTGDITPYSVPTAVSNLPGVK--AIAAGGNHSVALLADGTVRTWGYNNHG 460
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLP 181
QLG+ N VP+ + L D V IA G + AV G + WG+ QLG
Sbjct: 461 QLGNGSNTNSNVPVPVTGLTD--VVGIAAGYEFTLAVLSNGSVKAWGHDDSFQLGNGATT 518
Query: 182 VVQPCPVE 189
Q PV+
Sbjct: 519 GDQTTPVD 526
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
++ GG+F+ + GQ+W+WG N+ +LGR +L++ + I+ G YH+
Sbjct: 226 LAAGGYFSAAIKPNGQVWSWGDNTYGQLGRATTSPSDSTPTQASLIN-DAVSISLGEYHA 284
Query: 104 LALTDDGKVFSWGYGGHGQLG---------HSF--TQNQKVPMVIEALADEFVTHIACGG 152
+ALT+DG+V + G +GQLG H+ ++ +P I+A+A + G
Sbjct: 285 IALTNDGRVVTLGRDDYGQLGDGPGDSSGTHTAPNLRDNILPAGIKAVA------VQAGR 338
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
S A+T +G +Y WG QLG+ + Q P
Sbjct: 339 YHSLALTSEGTVYAWGRNDVGQLGLGTITAPQESP 373
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 15/183 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++++WG D G+LG P++ S P++ + V+ +S G + + LT +G++
Sbjct: 241 QVWSWG-DNTYGQLGRAT-TSPSD----STPTQASLINDAVS-ISLGEYHAIALTNDGRV 293
Query: 61 WNWGANSNYELGRG--DRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSW 115
G + +LG G D G P L N++ ++ + + G YHSLALT +G V++W
Sbjct: 294 VTLGRDDYGQLGDGPGDSSGTHTAPNLRDNILPAGIKAVAVQAGRYHSLALTSEGTVYAW 353
Query: 116 GYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G GQLG + T Q+ P +I L+D V +A G + A+ G ++ WG+ + +
Sbjct: 354 GRNDVGQLGLGTITAPQESPALIPGLSD--VIALAAGDDHTLALKADGSVWAWGDNPNGE 411
Query: 175 LGV 177
LG
Sbjct: 412 LGT 414
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ TWG + G+LG G N +P V L V ++ G FT+ + G +
Sbjct: 451 VRTWGYNN-HGQLGNGSNTNSN------VPVPVTGL-TDVVGIAAGYEFTLAVLSNGSVK 502
Query: 62 NWGANSNYELGRGDRVGGWKPKL----LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
WG + +++LG G G + +P VR + G +H+LAL DDG + +WG
Sbjct: 503 AWGHDDSFQLGNGATTGDQTTPVDVQGIPTGRSVR--GLTAGIFHALALLDDGSMVAWGS 560
Query: 118 GGHGQLG 124
GQLG
Sbjct: 561 NVQGQLG 567
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
+R +A GGY S A+ +G+V+SWG +GQLG + T +L ++ V+ I+
Sbjct: 221 LRANTLAAGGYFSAAIKPNGQVWSWGDNTYGQLGRATTSPSDSTPTQASLINDAVS-ISL 279
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + A+T G++ G QLG
Sbjct: 280 GEYHAIALTNDGRVVTLGRDDYGQLG 305
>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
aries]
Length = 1137
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 60/180 (33%), Positives = 107/180 (59%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG D EG++GL + +P +V + P++ +SCG + + +T EG+L
Sbjct: 186 ELFMWG-DNSEGQIGL------QNITNMCVPHQV-TVGKPISWISCGYYHSAFVTTEGEL 237
Query: 61 WNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G + +LG + V P+L+P + + ++IQ+A GG H++ LT+ V+++G G
Sbjct: 238 YTFGEPESGKLGLPPKLLVNHKVPQLVPGISE-KVIQVACGGGHTVVLTEKA-VYTFGLG 295
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +FT P VIE++ D+ ++H+ CG + +A +TE G LY +G+ + +LG+
Sbjct: 296 QFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALITESGLLYTFGDGRHGKLGL 355
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L+ +G + G+LGLG N+ P+ +KAL P V V+CG T+VLT G+
Sbjct: 81 KLFMFGSNNW-GQLGLGSKATVNK------PTCIKALKPEKVKFVACGRNHTLVLTGGGK 133
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD L+ +I Q++ G S ALT+DG++F WG
Sbjct: 134 VYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTEDGELFMWGDN 193
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + ++ I+CG SA VT +G+LY +G + +LG+P
Sbjct: 194 SEGQIGLQNITNMCVPH--QVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLP 251
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 29 SIPSKV---KALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+IPSK K +P+ ++SCG T + T +L+ +G+N+ +LG G + KP +
Sbjct: 51 NIPSKFWFKKDIPI---SLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCI 107
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF- 144
L ++ +A G H+L LT GKV++ G GQLG T + +I +
Sbjct: 108 KALKPEKVKFVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHK 167
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++ G +TSAA+TE G+L+MWG+ + Q+G+
Sbjct: 168 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL 200
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYT+G E G+LGL P N +P V + V V+CGG T+VLTE+ +
Sbjct: 236 ELYTFGEPE-SGKLGLPPKLLVNH----KVPQLVPGISEKVIQVACGGGHTVVLTEKA-V 289
Query: 61 WNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G +LG G +PK++ ++ D +I + G H+ +T+ G ++++G G
Sbjct: 290 YTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALITESGLLYTFGDGR 349
Query: 120 HGQLGHSFTQ--NQKVPMVIEALADEFVTHIACGG 152
HG+LG NQ +P + V +ACGG
Sbjct: 350 HGKLGLGMENFANQFLPTLCSNFLKYIVHLVACGG 384
>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
Length = 390
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 3/169 (1%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S P +V+ L V ++ G F + L EEG++W WG N +LG GD +
Sbjct: 183 PGDIKQISTPVRVQGLE-NVQLIAVGAFHNLALLEEGEVWAWGNNEYGQLGTGDTQPRSQ 241
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK-VPMVIEAL 140
P + L + + IA GG+HS ALT D +V++WG G HG+LG ++ K VP + L
Sbjct: 242 PVPVQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLGFGDDKSSKMVPQKVHLL 301
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
A E + ++CGG+ S A T G+++ +G A +LG G V P+E
Sbjct: 302 AGETIAQVSCGGTHSVARTADGRIFSYGRADHGRLGY-GRKVTTGHPME 349
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 40/181 (22%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPV--------AAVSCGGFFTM 52
E++ WG +E G+LG G ++ ++ PVPV A ++ GG+ +
Sbjct: 219 EVWAWGNNE-YGQLGTGD-------------TQPRSQPVPVQGLSGLILADIAAGGWHST 264
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYHSLALTD 108
LT + +++ WG + LG GD K++P V + I Q++ GG HS+A T
Sbjct: 265 ALTTDAEVYAWGRGEHGRLGFGDDK---SSKMVPQKVHLLAGETIAQVSCGGTHSVARTA 321
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVI-----------EALADEFVTHIACGGSTSAA 157
DG++FS+G HG+LG+ PM + E FV +ACGG + A
Sbjct: 322 DGRIFSYGRADHGRLGYGRKVTTGHPMEVPIGIRPPKNAAENSGCWFVKLVACGGRHTLA 381
Query: 158 V 158
Sbjct: 382 T 382
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 9/138 (6%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANG 99
V +V G ++ + E+GQL+ WG N LG + P + L +V+I+Q A G
Sbjct: 42 VVSVVAGSRNSLAICEDGQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIG 101
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI-------EALADEF-VTHIACG 151
G+H LA+ D G+ ++WG +GQ G + + V+ + A + V +A G
Sbjct: 102 GWHCLAVDDQGQAYAWGGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAG 161
Query: 152 GSTSAAVTEKGKLYMWGN 169
G+ S +T G ++ WG
Sbjct: 162 GTHSVVLTHNGHVWTWGQ 179
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS-FTQNQKVPMVIEALADEFVTHIAC 150
R++ + G +SLA+ +DG++F+WG+ G LGH ++ + P ++AL + + A
Sbjct: 41 RVVSVVAGSRNSLAICEDGQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAI 100
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLG 176
GG AV ++G+ Y WG + Q G
Sbjct: 101 GGWHCLAVDDQGQAYAWGGNEYGQCG 126
Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 106 LTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD--EFVTHIACGGSTSAAVTEKGK 163
+ D V +WG G GQLG +++ I+ALA + V + G S A+ E G+
Sbjct: 1 MESDHAVLAWGSGEDGQLGVGNMEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQ 60
Query: 164 LYMWGNAKDSQLGVPGLPVVQPCPVE 189
L+ WG + LG P + P +
Sbjct: 61 LFTWGWNQRGTLGHPPESKTESTPTQ 86
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 88/159 (55%), Gaps = 7/159 (4%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +SIP +V+ L V ++ G F + L E G LW WG N +LG GD +
Sbjct: 180 PGDIKQISIPVRVQGLE-NVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTGDTQPRSQ 238
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK----VPMVI 137
P + L + ++ IA GG+HS ALTD G+V+ WG G HG+LG F N K +P +
Sbjct: 239 PIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG--FGDNDKSSKMLPQKV 296
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LA E + ++CGG+ S A+T G+++ +G +LG
Sbjct: 297 NLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 16/177 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+ WG E +G+LGLG +E + + V+AL P V +V G ++ + ++G L
Sbjct: 7 VIAWGSGE-DGQLGLGTN---DEKEWVCV---VEALEPYAVRSVVSGSRNSLAICDDGTL 59
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N LG P + L +V+I+Q A GG+H LA+ D G+ ++WG
Sbjct: 60 FTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 120 HGQLGHSFTQNQ-----KVPMVI--EALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+GQ G +++ + +VI V +A GG+ S +T +G ++ WG
Sbjct: 120 YGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTREGHVWSWGQ 176
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG+ + +LG G ++ L + + +G +SLA+ DDG +F+WG+ G
Sbjct: 10 WGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQRGT 69
Query: 123 LGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LGH T+ + +P ++ALA+ + A GG AV ++G+ Y WG + Q G
Sbjct: 70 LGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V +WG G GQLG ++ V+EAL V + G S A+ + G L+ WG +
Sbjct: 7 VIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQ 66
Query: 172 DSQLGVP 178
LG P
Sbjct: 67 RGTLGHP 73
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 101/184 (54%), Gaps = 14/184 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG G+LGLG G + L+ PS++ P V V+CG T+ LT G+
Sbjct: 6 ELYCWG-STSHGQLGLG---GIEDEQILT-PSQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 60 LWNWGANSNYELGRGDRVGGWKPK-----LLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
++ G+N +LG + +P+ L+P L D IIQI G HSLAL+D G+V S
Sbjct: 61 VYACGSNDYSQLGHD--LPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLS 118
Query: 115 WGYGGHGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
WG GQLGH+ + ++P V+ L + V IACG + S A+T G+LY WG+
Sbjct: 119 WGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYG 178
Query: 174 QLGV 177
QLGV
Sbjct: 179 QLGV 182
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 100/179 (55%), Gaps = 6/179 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + G+LG+ PN+ + P ++ L +P+AA++CGG + ++++ G
Sbjct: 168 ELYSWGSN-IYGQLGVN---SPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGA 223
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + + +A G S+ LT++G VF+ G G
Sbjct: 224 VFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 283
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH F+ N+ +P ++ L +T +ACG T A V +G++Y +G QLG
Sbjct: 284 YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGT 342
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 7/164 (4%)
Query: 18 PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DR 76
P + P + L IP + + + CG ++ L++ GQ+ +WG N +LG D+
Sbjct: 77 PTKRPRMSPFLLIPELQDYV---IIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDK 133
Query: 77 VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ---KV 133
PK++ LV ++QIA G HSLALT G+++SWG +GQLG + +
Sbjct: 134 EIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNY 193
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
P+ + L + IACGG+ S +++ G ++ WG QLG+
Sbjct: 194 PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL 237
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LGL N+ S P+++K L + V V+CG F++ LT EG +
Sbjct: 224 VFGWGRNNC-GQLGL------NDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 276
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+++ L+ I Q+A G H+LAL G+V+++G G
Sbjct: 277 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGS 336
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG T++ +P V+
Sbjct: 337 SGQLGTRSTKSLMLPQVV 354
>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
Length = 1053
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 103/188 (54%), Gaps = 9/188 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG + G+LGLG G + L+ PS++ P V V+CG T+ LT G+
Sbjct: 2 ELYCWG-NASHGQLGLG---GIEDEQILT-PSQIPWKPDSAVNQVACGHRHTLFLTASGK 56
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+N +LG + +P +P L D I QIA G HS+ALT+ G+V SWG
Sbjct: 57 VYACGSNDYSQLGH--ELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNE 114
Query: 120 HGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH+ Q+ ++P ++ L + V IACG + S A+T G+LY WG+ QLGV
Sbjct: 115 CGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVK 174
Query: 179 GLPVVQPC 186
+ C
Sbjct: 175 SPSELSQC 182
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 99/179 (55%), Gaps = 6/179 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + G+LG+ + P+E + P ++ L +P AA++CGG T ++++
Sbjct: 159 ELYSWGSN-IYGQLGV---KSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSA 214
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + + +A G S+ LT++G VF+ G G
Sbjct: 215 VFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 274
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH F+ N+ +P ++ L ++ +ACG T A V +G++Y +G QLG
Sbjct: 275 YGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGT 333
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 11/161 (6%)
Query: 27 GLSIPSKVKALPVP------VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DRVGG 79
G +P+K + L +P + ++CG +M LTE GQ+ +WG N +LG D+
Sbjct: 69 GHELPTK-RPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVI 127
Query: 80 WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH---SFTQNQKVPMV 136
PK++ LV ++QIA G HSLALT G+++SWG +GQLG S PM
Sbjct: 128 QLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSELSQCNYPMR 187
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ L IACGG+ + +++ ++ WG QLG+
Sbjct: 188 LTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGL 228
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LGL N+ + P+++K L + V V+CG F++ LT EG +
Sbjct: 215 VFGWGRNNC-GQLGL------NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 267
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+++ L+ I Q+A G H+LAL G+++ +G G
Sbjct: 268 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGS 327
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG T++ +P V+
Sbjct: 328 SGQLGTRNTKSLNLPQVV 345
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 18/185 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L + V + CG F++ LT+ G++
Sbjct: 2269 VFSWG-DGDFGKLGRGGSEGCN------IPHNIERLNALEVVQIECGAQFSLALTKTGEV 2321
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G KP ++ +L D ++I +A G H LA+TD G+V++WG H
Sbjct: 2322 WTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDH 2381
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQ G+ T + P ++ L D + +ACG S S A T +D+Q+
Sbjct: 2382 GQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWT----------LQDTQVVSKVE 2431
Query: 181 PVVQP 185
PV+ P
Sbjct: 2432 PVIFP 2436
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELYTWG E GRLG G + P +K+L + V+CG T+ LT+E
Sbjct: 2214 ELYTWGLGE-YGRLGHGDNITQLK------PKLIKSLVGHRIVQVACGSRDAQTLALTDE 2266
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L + ++QI G SLALT G+V++WG
Sbjct: 2267 GWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGK 2326
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P VIE+L D+ V H+A G AVT+ G++Y WG+ Q G
Sbjct: 2327 GDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 2385
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 99/182 (54%), Gaps = 14/182 (7%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTE 56
+LY G EG GRLGLG + + P + L + AV GG M LT
Sbjct: 2108 KLYACG--EGTNGRLGLG------HSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTL 2159
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+G++++WG + +LG G+R+ KPK++ L +I IA G HS A+T G++++WG
Sbjct: 2160 DGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWG 2219
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQ 174
G +G+LGH Q P +I++L + +ACG + + A+T++G ++ WG+ +
Sbjct: 2220 LGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGK 2279
Query: 175 LG 176
LG
Sbjct: 2280 LG 2281
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P+ +A S F +++ EG+L+ G +N LG G P+ +P L I ++A
Sbjct: 2090 PIHIAGGSKSLF---IVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVA 2146
Query: 98 --NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTS 155
+GG H++ALT DGKVFSWG G G+LGH N P +IEAL + + IACG S S
Sbjct: 2147 VHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHS 2206
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
AA+T G+LY WG + +LG
Sbjct: 2207 AAITSSGELYTWGLGEYGRLG 2227
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT G +
Sbjct: 3245 VWSWG-DGDYGKLGRGG------SDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSV 3297
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L +II IA G H +A +D+G+VF+WG
Sbjct: 3298 YTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDE 3357
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + +T++ACG + + A
Sbjct: 3358 GQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTLA 3394
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 85/150 (56%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ + +++WG + +LG G+R+ PKL+ L
Sbjct: 3108 TLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEAL 3167
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
II IA GG HS A+T G++++WG G +G+LGH +++Q P +IE L V +
Sbjct: 3168 QGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDV 3227
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 3228 ACGSGDAQTLCITDDDNVWSWGDGDYGKLG 3257
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 6/185 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LYTWG+ GR G LG G ++ I V + VA S G T+ +T++
Sbjct: 3190 QLYTWGK----GRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGS-GDAQTLCITDDDN 3244
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PK + +L + +I++ G S+ALT G V++WG G
Sbjct: 3245 VWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGD 3304
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P + AL + + IA G A +++G+++ WG+ + QLG
Sbjct: 3305 YHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDT 3364
Query: 180 LPVVQ 184
+Q
Sbjct: 3365 TNAIQ 3369
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGKV++ GY
Sbjct: 3031 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGY 3090
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T + VP ++E++ F+ IA GG A++ +Y WG D +L
Sbjct: 3091 GAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKL 3150
Query: 176 G 176
G
Sbjct: 3151 G 3151
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 59 QLWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+++ WG N +LG +G +V P L + I IA G ++ +GK+++ G
Sbjct: 2056 RVFVWGLNDKDQLGGMKGSKVK--LPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACG 2113
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQ 174
G +G+LG + N P I L+ + +A GG + A+T GK++ WG +D +
Sbjct: 2114 EGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGK 2173
Query: 175 LG 176
LG
Sbjct: 2174 LG 2175
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+VF WG QLG K+P+ + L+ + HIA G + V+ +GKLY G
Sbjct: 2056 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEG 2115
Query: 171 KDSQLGV---PGLPVVQPCP 187
+ +LG+ +P +P P
Sbjct: 2116 TNGRLGLGHSNNVPYPRPIP 2135
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 104/198 (52%), Gaps = 16/198 (8%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCG-GFFTMV 53
LYT DE G LGLG + E L S K +A +S G G ++
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDCLSGKK-----IACLSYGSGPHVVL 89
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+V
Sbjct: 90 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 149
Query: 113 FSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
F+WGY GQ+G T NQ +P V L ++ V +IACG S AV + G++Y+WG
Sbjct: 150 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNG 209
Query: 172 DSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 210 NGQLGL-GSSGNQPTPCR 226
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG +M + + G
Sbjct: 148 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 201 EVYVWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 261 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 98/167 (58%), Gaps = 5/167 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLG+G G + ++ ++ + V AV+ GG + L+ EG +++WG + +L
Sbjct: 4355 GRLGIG---GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4411
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G G+R+ +PKL+ L+ I+ IA GG+HS A+T G +++WG G +G+LGH +++Q
Sbjct: 4412 GHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ 4471
Query: 132 KVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
P ++EAL D V +ACG + + VT+ ++ WG+ +LG
Sbjct: 4472 LTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLG 4518
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTM-VLTEEGQL 60
+Y WG ++ + +LG G + SK+K P+ +A GG T+ V+++EG+L
Sbjct: 3261 VYVWGLNDKD-QLGGLKGSKIKLPVYSEVLSKLK--PIHIA----GGSKTLFVVSQEGKL 3313
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ G +N LG GD +PKL+P L I ++A +GG H+LALT DGK+FSWG G
Sbjct: 3314 YACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEG 3373
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LGH + + P +IE+L + + IACG SAA+T G+LY WG + +LG
Sbjct: 3374 EDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLG 3431
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY G EG GRLGLG E + S+ + AV GG + LT++G+
Sbjct: 3312 KLYACG--EGTNGRLGLGDDSNVCEPKLIPFLSQYM---IKKMAVHSGGKHALALTQDGK 3366
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG + +LG G+ V KP+L+ +L RI IA G HS A+T G++++WG G
Sbjct: 3367 IFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGE 3426
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+G+LGH T Q P ++++L + V +ACG + + A+T G +Y WG+ +LG
Sbjct: 3427 YGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLG 3485
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 95/179 (53%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P V++L V V+CG TM LT +
Sbjct: 3418 ELYTWGLGE-YGRLGHG------DTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTAD 3470
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G + P L+ L + ++QI G SLALT G+V++WG
Sbjct: 3471 GSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGK 3530
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3531 GDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3589
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
PV + A G + LT++ +++WG LG GDRV +PKL+ LVD I IA
Sbjct: 504 PVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIA 563
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STS 155
G +S L+ +G++++WG G +G+LGH + N +P ++ AL V H+ACG S +
Sbjct: 564 CGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQT 623
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
VT G ++ WG+ +LG
Sbjct: 624 LCVTASGIVFSWGDGNYGKLG 644
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 17/179 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G IP K+++L + V V CG F++ LT G +
Sbjct: 4506 VWSWG-DGDYGKLGRGG------SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAI 4558
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L +II IA G H +A TD G+VF+WG
Sbjct: 4559 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDE 4618
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG T + P ++ AL + +T +ACG + + A W K +Q +P
Sbjct: 4619 GQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLA---------WSTMKATQSRMPA 4668
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG G + G P + L + V + CG F++ LT+ G++
Sbjct: 3473 VYSWG-DGDFGKLGRGG------SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEV 3525
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G+ KP L+ L +++ +A G H LA+TD G+V++WG H
Sbjct: 3526 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDH 3585
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T K P ++ L D V ++CG S S A
Sbjct: 3586 GQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3622
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 98/191 (51%), Gaps = 11/191 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G + + IP+ V AL V V+CG T+ +T
Sbjct: 577 ELYTWGRG-NYGRLGHG------NSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTAS 629
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG + +LGRG G PK++ L+D+ + ++ GG S ALT G+V++WG
Sbjct: 630 GIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGK 689
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +LGH ++ + P VIE L + V + G A+TE +Y WG Q+
Sbjct: 690 GEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQID- 748
Query: 178 PGLPVVQPCPV 188
P L V P P
Sbjct: 749 PALGTVVPEPT 759
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGG--FFTMVLTEE 57
LYTWG+ GR G LG G ++ P V+AL V V+CG T+ +T++
Sbjct: 4452 LYTWGK----GRYGRLGHGDSEDQL----TPKLVEALQDYKVIDVACGSGDAQTLCVTDD 4503
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + +I++ G S+ALT G +++WG
Sbjct: 4504 DNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGK 4563
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P + AL + + IA G A T+KG+++ WG+ + QLG
Sbjct: 4564 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4622
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G P V K L + VA V CGG F+ LT G++
Sbjct: 632 VFSWG-DGNYGKLGRGG------CDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEV 684
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG Y LG G+ PK++ L ++ ++ G +H LALT+D V+ WG +
Sbjct: 685 YTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDY 744
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ+ + P + L+ + + +ACG + S A
Sbjct: 745 GQIDPALGTVVPEPTLCPTLSGKNIIGLACGLTQSFA 781
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +L +R +Q+ G LA+T DGKV++ GY
Sbjct: 4292 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGY 4351
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T + VP ++E++ FV +A GG A++ +G +Y WG D +L
Sbjct: 4352 GAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4411
Query: 176 G 176
G
Sbjct: 4412 G 4412
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V+ WG QLG K+P+ E L+ HIA G T V+++GKLY G
Sbjct: 3261 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGT 3320
Query: 172 DSQLGV 177
+ +LG+
Sbjct: 3321 NGRLGL 3326
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G ++ WG+ GQLG K+P++ E+L+ + G T AVT GK+Y G
Sbjct: 4292 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGY 4351
Query: 170 AKDSQLGVPGLPVV 183
+LG+ G V
Sbjct: 4352 GAAGRLGIGGTDSV 4365
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 105/191 (54%), Gaps = 10/191 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE-EG 58
++Y+WG + GRLG G E G + +P + PVA V+CG T+V+T+ +G
Sbjct: 83 QIYSWGWGD-FGRLGHG------ECGDVFVPRPIAFFSGRPVARVACGDTHTLVVTQGDG 135
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L+ +G N N +LG G P+L+ L R+ +A G HSLA T+ G VFSWG+G
Sbjct: 136 ALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWG 195
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV- 177
+G LG +Q++ P + L VT + CG SA VT++G+++ +G +K QLG
Sbjct: 196 RYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHG 255
Query: 178 PGLPVVQPCPV 188
+ +PC V
Sbjct: 256 DHVDHTRPCLV 266
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
LYT+GR++ G+LGLG N+ LS P V AL V++V+CG ++ TE G +
Sbjct: 137 LYTFGRNQ-NGQLGLGH---TNDC--LS-PQLVTALQGERVSSVACGSEHSLAATEAGTV 189
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG LG GD + P + L V + + G HS +TD+G+VF++G+ +
Sbjct: 190 FSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKY 249
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH + P ++ L V+ +A G + A +G LY WG K QLG+
Sbjct: 250 GQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGL 306
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 30 IPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
P++V L V V +V CG + V+T+EG+++ +G + +LG GD V +P L+ L
Sbjct: 210 TPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGL 269
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD------ 142
R+ +A G H++A +G +++WG+ GQLG ++++ P +
Sbjct: 270 QHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVE 329
Query: 143 ------EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V +ACG + AVTE G++Y WG + QLG
Sbjct: 330 AGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLG 369
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V VSCG ++ L + G + +WG + +LG G P + L D + + G
Sbjct: 12 VLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGA 71
Query: 101 YHSLAL-TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
+++A+ + G+++SWG+G G+LGH + VP I + V +ACG + + VT
Sbjct: 72 EYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHTLVVT 131
Query: 160 E-KGKLYMWGNAKDSQLGV 177
+ G LY +G ++ QLG+
Sbjct: 132 QGDGALYTFGRNQNGQLGL 150
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
+ R++ ++ G HS+AL D G V SWG G GQLGH P I AL D V +
Sbjct: 9 EARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVV 68
Query: 150 CGGSTSAAV-TEKGKLYMWGNAKDSQLG 176
CG + AV + +G++Y WG +LG
Sbjct: 69 CGAEYTVAVASSRGQIYSWGWGDFGRLG 96
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV--------- 91
V+ V+ G TM EG L+ WG N +LG GD P +
Sbjct: 274 VSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAA 333
Query: 92 ---RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
R+ +A G H++A+T+ G+V+SWG G +GQLGH Q+
Sbjct: 334 TPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQD 375
Score = 35.4 bits (80), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGR---GPNEAGGLSIPSKVKA----LPVPVAAVSCGGFFTMV 53
LY WG ++ G+LGLG P G + P VA ++CG T+
Sbjct: 292 NLYAWGWNK-FGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVA 350
Query: 54 LTEEGQLWNWGANSNYELGRG 74
+TE G++++WG N +LG G
Sbjct: 351 VTEAGEVYSWGRGVNGQLGHG 371
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 13/180 (7%)
Query: 2 LYTWGRDEGEGRLGLGP--GRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
LYTWG+ GP G + + P V AL + V+CG T+V+ EEG
Sbjct: 269 LYTWGK--------AGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEG 320
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++++G N ELG+G KP ++PNLV I +++ G +HS A+ +DG +F WG+G
Sbjct: 321 RVYSFGINKFGELGQGHDKAITKPTMVPNLVS--ICKVSCGRHHSAAIDEDGVLFMWGWG 378
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLG ++ P + D+ + ++CG +AA+T G Y WG+ SQ GVP
Sbjct: 379 ARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVP 438
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 72/134 (53%), Gaps = 11/134 (8%)
Query: 44 VSCGGFFTMVLTEEG--QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIA 97
V G T VL ++ L+ WG LG D KP+ LPN+V+ + IA
Sbjct: 146 VQLGTIKTKVLLKDNSCDLYLWGGGDRGRLGHKDD----KPRFLPNVVESLLGQNVTMIA 201
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSA 156
GG H++AL G+VFSWG G G LGH +++ P++I+ L D V H+AC + SA
Sbjct: 202 CGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDRYSPLMIDGPLRDVNVVHVACYENHSA 261
Query: 157 AVTEKGKLYMWGNA 170
++E G LY WG A
Sbjct: 262 VISEDGNLYTWGKA 275
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG + GRLG + +P+ V++L V ++CGG T+ L +GQ
Sbjct: 163 DLYLWGGGD-RGRLG------HKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQ 215
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WGA LG G+ + P ++ L DV ++ +A HS +++DG +++WG
Sbjct: 216 VFSWGAGPQGCLGHGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGKA 275
Query: 119 G--HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G + S T+ K P +++AL + +ACG S + + E+G++Y +G K +LG
Sbjct: 276 GPFLGYMDDSVTKQTK-PRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELG 334
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 7/175 (4%)
Query: 19 GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG 78
G+G ++A ++ P+ V L V + VSCG + + E+G L+ WG + +LG+G+
Sbjct: 334 GQGHDKA--ITKPTMVPNL-VSICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPKS 390
Query: 79 GWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG--HSFTQNQKVPMV 136
+ P + D + ++ G H+ A+T +G + WG Q G S P
Sbjct: 391 LFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELSSPRG 450
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL--GVPGLPVVQPCPVE 189
I + T I CG + + VT G+L+ WG QL G QP PVE
Sbjct: 451 IVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLGNGEAKKTFSQPMPVE 505
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 27 GLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW-KPKLL 85
G+ +PS ++ ++CG FT+++T GQL+ WG N + +LG G+ + +P +
Sbjct: 450 GIVLPSGIRP-----TQINCGANFTVLVTSIGQLFTWGCNMSGQLGNGEAKKTFSQPMPV 504
Query: 86 PNLVDVRIIQIANGGYH 102
+L + R+ +A G H
Sbjct: 505 ESLSEKRVKMVACGEDH 521
>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
Length = 1280
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 96/176 (54%), Gaps = 13/176 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCG-GFFTMVLTEEGQL 60
++TWG +E G+LG+G N P++V L + A+S G + M L+E G +
Sbjct: 104 VWTWGANE-NGQLGIGTITNVNA------PAQVPGLS-GIKAISGGLAYHGMALSENGTV 155
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG N N ELG G + P L+ L DV IA GGY+SLAL DG V++WG G
Sbjct: 156 WTWGKNDNGELGNGTTIQQNSPVLVAGLSDV--TAIAAGGYYSLALKSDGTVWAWGVNGS 213
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T ++ VP+ + L D V IA GGS S A+ + G ++ WGN LG
Sbjct: 214 GELGDGTTTDRHVPVQVAGLTD--VMAIAAGGSHSLAIKQDGTVWAWGNNTYGTLG 267
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 94/188 (50%), Gaps = 13/188 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++TWG+++ G LG G N P V L V A++ GG++++ L +G +W
Sbjct: 155 VWTWGKND-NGELGNGTTIQQNS------PVLVAGLS-DVTAIAAGGYYSLALKSDGTVW 206
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N + ELG G P + L DV + IA GG HSLA+ DG V++WG +G
Sbjct: 207 AWGVNGSGELGDGTTTDRHVPVQVAGLTDV--MAIAAGGSHSLAIKQDGTVWAWGNNTYG 264
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV-PGL 180
LG ++ P+ + L + + +A GG S AV G ++ WG+ QLG+
Sbjct: 265 TLGDGTRTHRTRPVQVRNL--QHIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNA 322
Query: 181 PVVQPCPV 188
+ P PV
Sbjct: 323 SSLIPVPV 330
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 16/191 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG + G+LG G + P K L V + G +M L ++G +
Sbjct: 53 EVYSWGYGD-RGQLGDGTWNTR------TTPVMAKNLN-HVIDIHSGVRSSMALRQDGTV 104
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG--YHSLALTDDGKVFSWGYG 118
W WGAN N +LG G P +P L ++ I +GG YH +AL+++G V++WG
Sbjct: 105 WTWGANENGQLGIGTITNVNAPAQVPGLSGIKAI---SGGLAYHGMALSENGTVWTWGKN 161
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+G+LG+ T Q P+++ L+D VT IA GG S A+ G ++ WG +LG
Sbjct: 162 DNGELGNGTTIQQNSPVLVAGLSD--VTAIAAGGYYSLALKSDGTVWAWGVNGSGELG-D 218
Query: 179 GLPVVQPCPVE 189
G + PV+
Sbjct: 219 GTTTDRHVPVQ 229
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 12/175 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG + G G LG G + +P +V L V A++ GG ++ + ++G +W
Sbjct: 205 VWAWGVN-GSGELGDGTTTDRH------VPVQVAGL-TDVMAIAAGGSHSLAIKQDGTVW 256
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N+ LG G R +P + NL I+ +A GGYHSLA+ G V+SWG
Sbjct: 257 AWGNNTYGTLGDGTRTHRTRPVQVRNLQ--HIVAVAGGGYHSLAVDRAGNVWSWGDNSQQ 314
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG + + +P+ + + E V I+ GG S A+ + G ++ WG Q+G
Sbjct: 315 QLGLNSNASSLIPVPVPGI--EHVREISAGGFHSVAMKKDGTVWGWGYNSGGQIG 367
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD 90
P +V+ L + AV+ GG+ ++ + G +W+WG NS +LG P +P +
Sbjct: 277 PVQVRNLQ-HIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNASSLIPVPVPGIEH 335
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIA 149
VR +I+ GG+HS+A+ DG V+ WGY GQ+G ++ + +P + +A+ D
Sbjct: 336 VR--EISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGTYNNTRGIPTLTKAVLDTTSPDTG 393
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDS 173
G ++T W A D+
Sbjct: 394 SGSLNPHSITSDSVALEWPKASDN 417
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
+I G YH+ +L G+V+SWGYG GQLG + P++ + L V I G +
Sbjct: 37 KIVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNL--NHVIDIHSGVRS 94
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
S A+ + G ++ WG ++ QLG+
Sbjct: 95 SMALRQDGTVWTWGANENGQLGI 117
>gi|302808359|ref|XP_002985874.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
gi|300146381|gb|EFJ13051.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
Length = 394
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 3/169 (1%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S+P +V+ L V ++ G F + L + G++W WG N +LG GD
Sbjct: 185 PGDIKQISVPVRVQGLE-NVTMIAVGAFHNLALVQHGEVWAWGNNEYGQLGTGDTQPRSS 243
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK-VPMVIEAL 140
P + L + ++ IA GG+HS+ALT DG V+ WG G HG+LG ++ K +P + L
Sbjct: 244 PVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLL 303
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
A E V ++CGG+ S A T G+++ +G +LG G V PVE
Sbjct: 304 AGEPVVQVSCGGTHSVAATISGRMFSFGRGDHGRLGYSG-AVTTGHPVE 351
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 33/181 (18%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG +E G+LG G + S P VK L + + ++ GG+ +M LT +G
Sbjct: 221 EVWAWGNNE-YGQLGTG------DTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGA 273
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR----IIQIANGGYHSLALTDDGKVFSW 115
++ WG + LG GD K+LP V + ++Q++ GG HS+A T G++FS+
Sbjct: 274 VYGWGRGEHGRLGFGDDK---SSKMLPQKVHLLAGEPVVQVSCGGTHSVAATISGRMFSF 330
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTH------------------IACGGSTSAA 157
G G HG+LG+S P+ + + H +ACGG + A
Sbjct: 331 GRGDHGRLGYSGAVTTGHPVEVPVSLHHYSRHNIVSEDEANGSTGWVVKLVACGGRHALA 390
Query: 158 V 158
V
Sbjct: 391 V 391
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WGA + +LG G+ ++ L D ++ + G +SLA+ +DG++F+WG+ G
Sbjct: 10 WGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWGWNQRGT 69
Query: 123 LGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
LGH T+ + P ++ALA+ + A GG AV E+G+ Y WG
Sbjct: 70 LGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGRTYAWG 116
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 21/182 (11%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+ WG E +G+LGLG + + V AL V +V G ++ + E+G+L
Sbjct: 7 VLAWGAGE-DGQLGLGNLQDKDSV------CVVDALRDHNVVSVVAGSRNSLAICEDGRL 59
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N LG P + L +V+I+Q A GG+H LA+ ++G+ ++WG
Sbjct: 60 FTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGRTYAWGGNE 119
Query: 120 HGQL------------GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
+GQ G S ++ + + V + GG+ S +TE+G ++ W
Sbjct: 120 YGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVRQLTAGGTHSVVLTEEGHVWTW 179
Query: 168 GN 169
G
Sbjct: 180 GQ 181
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V +WG G GQLG Q++ V++AL D V + G S A+ E G+L+ WG +
Sbjct: 7 VLAWGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWGWNQ 66
Query: 172 DSQLGVP 178
LG P
Sbjct: 67 RGTLGHP 73
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 8/172 (4%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + + +P +V+ L V+ ++ G F + L E+G+L WG N +LG GD
Sbjct: 180 PGDIKQIFVPVRVQGLE-NVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSH 238
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK----VPMVI 137
P + L D+ ++ IA GG+HS ALTD G+V+ WG G HG+LG F N K VP +
Sbjct: 239 PVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG--FGDNDKSSKMVPQKV 296
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
LA+E + ++CGG+ S A+T G+++ +G +LG G V P+E
Sbjct: 297 NLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY-GRKVTTGQPLE 347
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG+ + +LG G ++ L + + +G +SLA+ DDG +F+WG+ G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 123 LGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LGH T+ + +P ++ALA+ +T A GG AV ++G+ Y WG + Q G
Sbjct: 70 LGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+ WG E +G+LG+G A V+AL P V +V G ++ + ++G +
Sbjct: 7 IIAWGSGE-DGQLGIGTNEEKEWA------CVVEALEPYSVRSVVSGSRNSLAICDDGTM 59
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N LG P + L +V+I Q A GG+H LA+ D G+ ++WG
Sbjct: 60 FTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 120 HGQLGHSFTQNQ-----KVPMVIEALADEFVT--HIACGGSTSAAVTEKGKLYMWGN 169
+GQ G +++ + +VI +T +A GG+ S +T +G ++ WG
Sbjct: 120 YGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
+ +WG G GQLG + ++ V+EAL V + G S A+ + G ++ WG +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 172 DSQLGVP 178
LG P
Sbjct: 67 RGTLGHP 73
>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
Length = 993
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 102/178 (57%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + P V+ L VP+ +S G +M L+ G
Sbjct: 126 ELFAWGQN-LHGQLGVG-----RLFASIPTPQAVEHLSGVPLVQISAGKAHSMALSMSGN 179
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G G P L+ L + ++ +A GG H+ LT DG VF++G G
Sbjct: 180 VYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTFGAGK 239
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ TQN+ P ++ LA VT IACG T A V++ GK++ +G+ K+ QLG
Sbjct: 240 YGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLG 297
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 80/137 (58%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N + +LG G P+ + +L V ++QI+ G
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 167
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ G V+SWG GQLG T + P +IE L ++ V +ACGGS +A +T
Sbjct: 168 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT 227
Query: 160 EKGKLYMWGNAKDSQLG 176
G ++ +G K QLG
Sbjct: 228 TDGLVFTFGAGKYGQLG 244
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 82/144 (56%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WGR++ G+LGLG G + PS ++ L V ++CGG T +LT +G +
Sbjct: 180 VYSWGRNDL-GQLGLGHTDGED------FPSLIETLDNQQVEFLACGGSHTALLTTDGLV 232
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA +LG +P+L+ L R+ QIA G H+LA D GKVFS+G G
Sbjct: 233 FTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGK 292
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T NQ +P+ ++ ++E
Sbjct: 293 EGQLGNGGTHNQLIPLPMKLPSNE 316
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 13/140 (9%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
+ + +V G ++L+ +G+ + + N + E R + L + IIQIA
Sbjct: 66 MKIHSVDQGAEHMLILSSDGKPFEY--NYSIEHARFQCI----------LQEKSIIQIAC 113
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
G YHSLAL+ G++F+WG HGQLG + P +E L+ + I+ G + S A
Sbjct: 114 GDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAHSMA 173
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
++ G +Y WG QLG+
Sbjct: 174 LSMSGNVYSWGRNDLGQLGL 193
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
++I + G H L L+ DGK F + Y + H+ Q L ++ + IAC
Sbjct: 66 MKIHSVDQGAEHMLILSSDGKPFEYNYS----IEHARFQC--------ILQEKSIIQIAC 113
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
G S A+++ G+L+ WG QLGV L P P
Sbjct: 114 GDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTP 150
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 100/192 (52%), Gaps = 12/192 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL++WG + G+LGLG NE +P +V L VP+A V+CG ++ LT G
Sbjct: 214 ELFSWGGN-ASGQLGLGRDSTGNE----RLPRRVSHLVGVPLALVACGAMHSVGLTPSGT 268
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG NS +LG D+ P +L L RI + G H+ ALT DG VF++G G
Sbjct: 269 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGT 328
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG-- 176
+GQLGH N+ VP + L ++ ++CG T A + G+LY++G QLG
Sbjct: 329 YGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNG 388
Query: 177 ---VPGLPVVQP 185
LPV P
Sbjct: 389 TLESSALPVTVP 400
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANG 99
+ AV+CG ++ L++ GQ+++WG N N +LG G + +PK++ L + I+QIA G
Sbjct: 143 IRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACG 202
Query: 100 GYHSLALTDDGKVFSWGYGGHGQ--LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
H LAL ++G++FSWG GQ LG T N+++P + L + +ACG S
Sbjct: 203 AVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVG 262
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
+T G +++WG QLG+
Sbjct: 263 LTPSGTVFVWGRNSCGQLGL 282
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG + G+LG G E P +K L + + ++CG + L G+
Sbjct: 161 QVFSWGCNRN-GQLGCG-----TEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGE 214
Query: 60 LWNWGANSNYELGRG-DRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
L++WG N++ +LG G D G + P+ + +LV V + +A G HS+ LT G VF WG
Sbjct: 215 LFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGR 274
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S +++ P V++ L + + H+ CG + +AA+T G ++ +G QLG
Sbjct: 275 NSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLG 333
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 94/179 (52%), Gaps = 6/179 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGR-GPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
LY+WG G LGL G+ G + +S P +V+ V V+CG T+VL G
Sbjct: 53 LYSWGLGPN-GELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGS 111
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++ GAN +LG+ DR K + + L I +A G HSLAL+D G+VFSWG
Sbjct: 112 VYSCGANDFGQLGQ-DR-SMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNR 169
Query: 120 HGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG + ++ P VI+ LA + IACG A+ G+L+ WG QLG+
Sbjct: 170 NGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGL 228
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AVS GG + L+ EG +++WG + +LG G++V +PKL+ +L
Sbjct: 4 TLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDL 63
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ V I+ IA GG+HS A+T G +++WG G +G+LGH + +Q P V+EAL D V +
Sbjct: 64 LGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDV 123
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + VT+ ++ WG+ +LG
Sbjct: 124 ACGSGDAQTLCVTDDDNVWSWGDGDYGKLG 153
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+Y+WG + +G+LG G + P ++ L V + ++CGG + +T G
Sbjct: 34 HVYSWGEGD-DGKLGHGNKVSYDR------PKLIEDLLGVEIVDIACGGHHSAAITSAGW 86
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGY 117
L+ WG LG GD +PK++ L D ++I +A +G +L +TDD V+SWG
Sbjct: 87 LYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGD 146
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +G+LG + KVP+ I++LA V + CG S A+T G +Y WG +LG
Sbjct: 147 GDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLG 205
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT G +
Sbjct: 141 VWSWG-DGDYGKLGRGG------SDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAV 193
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L +II IA G H +A +D G+VF+WG
Sbjct: 194 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDE 253
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG T P ++ AL + +T +ACG + + A W AK +Q +P
Sbjct: 254 GQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLA---------WSTAKATQSRMPA 303
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGG--FFTMVLTEE 57
LYTWG+ GR G LG G ++ P V+AL V V+CG T+ +T++
Sbjct: 87 LYTWGK----GRYGRLGHGDSDDQLR----PKVVEALQDYKVIDVACGSGDAQTLCVTDD 138
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 139 DNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGK 198
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P + AL + + IA G A ++KG+++ WG+ + QLG
Sbjct: 199 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 257
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 82 PKLLPNL--VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA 139
P LL ++ V ++ + +++GG H +AL+ +G V+SWG G G+LGH + P +IE
Sbjct: 3 PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIED 62
Query: 140 LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
L + IACGG SAA+T G LY WG + +LG
Sbjct: 63 LLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLG 99
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 16/198 (8%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCG-GFFTMV 53
LYT DE G LGLG + E L S K +A +S G G ++
Sbjct: 35 LYTTINDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKK-----IACLSYGSGPHIIL 89
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
T EG+++ WG N +LG G G P ++ NL + ++I++A G YHSL LT DG+V
Sbjct: 90 ATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEV 149
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
++WGY GQ+G T NQ +P + L ++ V +IACG S AV + G++Y+WG
Sbjct: 150 YAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNG 209
Query: 172 DSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 210 NGQLGL-GSSGNQPTPCR 226
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E+Y WG + G++G G N+A IP +V V ++CG ++ + + G
Sbjct: 148 EVYAWGYNNS-GQVG--SGSTANQA----IPRRVTGCLQNKVVVNIACGQMCSVAVVDTG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 201 EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + + +
Sbjct: 261 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 100/192 (52%), Gaps = 12/192 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL++WG + G+LGLG NE +P +V L VP+A V+CG ++ LT G
Sbjct: 208 ELFSWGGN-ASGQLGLGRDSTGNE----RLPRRVSHLVGVPLALVACGAMHSVGLTPSGT 262
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG NS +LG D+ P +L L RI + G H+ ALT DG VF++G G
Sbjct: 263 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGT 322
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG-- 176
+GQLGH N+ VP + L ++ ++CG T A + G+LY++G QLG
Sbjct: 323 YGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNG 382
Query: 177 ---VPGLPVVQP 185
LPV P
Sbjct: 383 TLESSALPVTVP 394
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANG 99
+ AV+CG ++ L++ GQ+++WG N N +LG G + +PK++ L + I+QIA G
Sbjct: 137 IRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACG 196
Query: 100 GYHSLALTDDGKVFSWGYGGHGQ--LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
H LAL ++G++FSWG GQ LG T N+++P + L + +ACG S
Sbjct: 197 AVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVG 256
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
+T G +++WG QLG+
Sbjct: 257 LTPSGTVFVWGRNSCGQLGL 276
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG + G+LG G E P +K L + + ++CG + L G+
Sbjct: 155 QVFSWGCNRN-GQLGCG-----TEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGE 208
Query: 60 LWNWGANSNYELGRG-DRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
L++WG N++ +LG G D G + P+ + +LV V + +A G HS+ LT G VF WG
Sbjct: 209 LFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGR 268
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S +++ P V++ L + + H+ CG + +AA+T G ++ +G QLG
Sbjct: 269 NSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLG 327
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 94/179 (52%), Gaps = 6/179 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGR-GPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
LY+WG G LGL G+ G + +S P +V+ V V+CG T+VL G
Sbjct: 47 LYSWGLGPN-GELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGS 105
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++ GAN +LG+ DR K + + L I +A G HSLAL+D G+VFSWG
Sbjct: 106 VYSCGANDFGQLGQ-DR-SMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNR 163
Query: 120 HGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG + ++ P VI+ LA + IACG A+ G+L+ WG QLG+
Sbjct: 164 NGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGL 222
>gi|350994396|ref|NP_001017352.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
gi|89272755|emb|CAJ83624.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
Length = 599
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 79/128 (61%), Gaps = 2/128 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDG 110
+V E+G++++WG N +LG G+ + G P ++ L+ ++IQ+A G +HS+ALT DG
Sbjct: 157 LVCNEDGEVYSWGHNGYSQLGNGNAIQGVAPVQVCMELLAKKVIQVACGSHHSMALTSDG 216
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF WGY GQ+G T NQ VP + A L + V IA G S+S AVT+ G +Y WG
Sbjct: 217 EVFCWGYNNCGQVGSGTTANQSVPRRVSATLQSKVVVSIAAGQSSSMAVTDNGHVYCWGY 276
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 277 NGTGQLGI 284
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 9/191 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS-IPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + G +LG G N G++ + ++ L V V+CG +M LT +G+
Sbjct: 164 EVYSWGHN-GYSQLGNG-----NAIQGVAPVQVCMELLAKKVIQVACGSHHSMALTSDGE 217
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-IIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG N+ ++G G P+ + + + ++ IA G S+A+TD+G V+ WGY
Sbjct: 218 VFCWGYNNCGQVGSGTTANQSVPRRVSATLQSKVVVSIAAGQSSSMAVTDNGHVYCWGYN 277
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
G GQLG T NQ +P + + + G + + A++++G LY WG QLG+
Sbjct: 278 GTGQLGIGNTGNQLMPCRLVFAHPVCIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGI- 336
Query: 179 GLPVVQPCPVE 189
G Q PV+
Sbjct: 337 GNKSNQTAPVK 347
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 11/183 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G S+P +V A V +++ G +M +T+ G
Sbjct: 217 EVFCWGYNNC-GQVGSGT------TANQSVPRRVSATLQSKVVVSIAAGQSSSMAVTDNG 269
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG N +LG G+ P L V IIQ+ G H+LAL+D G +++WG
Sbjct: 270 HVYCWGYNGTGQLGIGNTGNQLMPCRLVFAHPVCIIQVVLGYAHTLALSDQGVLYAWGAN 329
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST-SAAVTEKGKLYMWGNAKDSQLGV 177
HGQLG NQ P+ + + V AC + SAA ++ G++YMWG + L
Sbjct: 330 SHGQLGIGNKSNQTAPVKV-GTNERMVEVTACHSTNISAAKSQSGQVYMWGLCRGQSLLS 388
Query: 178 PGL 180
P L
Sbjct: 389 PHL 391
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDGKVF 113
T+ +++ +G NS+ LG GD P+ L L RI+ ++ G G H L +DG+V+
Sbjct: 107 TQNNEVFVFGMNSSNCLGTGDNQSTIIPRRLDVLCGKRIVDLSYGSGPHILVCNEDGEVY 166
Query: 114 SWGYGGHGQL--GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
SWG+ G+ QL G++ V + +E LA + V +ACG S A+T G+++ WG
Sbjct: 167 SWGHNGYSQLGNGNAIQGVAPVQVCMELLAKK-VIQVACGSHHSMALTSDGEVFCWGYNN 225
Query: 172 DSQLG 176
Q+G
Sbjct: 226 CGQVG 230
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 101/179 (56%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+ WG + G+LG+G E + IPS++ P P+ ++CG T+ LT G+
Sbjct: 2 DLFCWG-NASHGQLGMGGI----EDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGK 56
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G N +LG + +P L+P L + ++ IA G HS+ALT+ G+V SWG
Sbjct: 57 VYACGNNDQAQLGHN--LPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDND 114
Query: 120 HGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG S Q+ ++P +I +L + V IACG + S A+T G+LY WG+ QLGV
Sbjct: 115 CGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 173
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 96/178 (53%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + G+LG+ P P E + P ++ L +P+A ++CGG + ++++
Sbjct: 159 ELYSWGSN-IYGQLGVKP---PQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSA 214
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ +G N+ +LG D P L L + + +A G S+ LT++G VF+ G G
Sbjct: 215 VFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGT 274
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH N+ +P ++ L +T +ACG T A V +G++Y +G QLG
Sbjct: 275 YGQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLG 332
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 90/161 (55%), Gaps = 11/161 (6%)
Query: 27 GLSIPSKVKALPVP------VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DRVGG 79
G ++P+K + L +P V A++CG +M LTE GQ+ +WG N +LG+ D+
Sbjct: 69 GHNLPTK-RPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLGQSTDQSII 127
Query: 80 WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ---NQKVPMV 136
PK++ +LV ++QIA G HSLALT G+++SWG +GQLG Q + P+
Sbjct: 128 ELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQELSHCNYPLR 187
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ L + IACGG+ S +++ ++ +G QLG+
Sbjct: 188 LTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGL 228
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 9/135 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ +GR+ G+LGL N+ + P+++K L + V V+CG F++ LT EG +
Sbjct: 215 VFGFGRNNC-GQLGL------NDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 267
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+++ L+ I Q+A G H+LAL G+V+ +G G
Sbjct: 268 FTCGAGTYGQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGS 327
Query: 120 HGQLGHSFTQNQKVP 134
GQLG+ T + +P
Sbjct: 328 SGQLGNRSTNSVTLP 342
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNY 69
G LGLG + E P ++ +L +A S G G ++ T EG+++ WG N+
Sbjct: 146 GCLGLGDIQSTIE------PRRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYS 199
Query: 70 ELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G G P + NL + ++I++A G YHSL LT DG+VF+WGY GQ+G T
Sbjct: 200 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST 259
Query: 129 QNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
NQ +P V L ++ V +IACG S AV + G++Y+WG + QLG+
Sbjct: 260 ANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGL 309
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG ++ + + G
Sbjct: 242 EVFAWGYNNS-GQVGSG------STANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNG 294
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L + + ++A G H+L LTD+G+V+ WG
Sbjct: 295 EVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGAN 354
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + + +
Sbjct: 355 SYGQLGTGNKSNQSYPTPVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 414
Query: 178 PGL 180
P L
Sbjct: 415 PHL 417
>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
Length = 1263
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + P V+ L VP+ +S G +M L+ G
Sbjct: 397 ELFAWGQN-LHGQLGVG-----RLFTSIPTPQLVEHLSGVPLVQISAGKAHSMALSMSGN 450
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G G P L+ L + ++ +A GG H+ LT DG VF++G G
Sbjct: 451 IYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGK 510
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ TQN+ P ++ LA VT +ACG T A V++ GK++ +G+ K+ QLG
Sbjct: 511 YGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDLGKVFSFGSGKEGQLG 568
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N + +LG G P+L+ +L V ++QI+ G
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAG 438
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ G ++SWG GQLG T + P +IEAL ++ V +ACGGS +A +T
Sbjct: 439 KAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLT 498
Query: 160 EKGKLYMWGNAKDSQLG 176
+ G ++ +G K QLG
Sbjct: 499 KDGLVFTFGAGKYGQLG 515
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 84/144 (58%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WGR++ G+LGLG G PS ++AL V ++CGG T +LT++G +
Sbjct: 451 IYSWGRNDL-GQLGLG------HTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLV 503
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA +LG +P+L+ L R+ Q+A G +H+LA D GKVFS+G G
Sbjct: 504 FTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDLGKVFSFGSGK 563
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T NQ +P+ ++ ++E
Sbjct: 564 EGQLGNGGTHNQLIPLPMKLPSNE 587
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 15/141 (10%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
+ + +V G ++L+ +G+ + + N + E R + L + IIQI
Sbjct: 337 MKIHSVDQGAEHMLILSSDGKPFEY--NYSIEHARFQCI----------LQEKSIIQITC 384
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
G YHSLAL+ G++F+WG HGQL G FT + P ++E L+ + I+ G + S
Sbjct: 385 GDYHSLALSKGGELFAWGQNLHGQLGVGRLFT-SIPTPQLVEHLSGVPLVQISAGKAHSM 443
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
A++ G +Y WG QLG+
Sbjct: 444 ALSMSGNIYSWGRNDLGQLGL 464
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
++I + G H L L+ DGK F + Y + H+ Q L ++ + I C
Sbjct: 337 MKIHSVDQGAEHMLILSSDGKPFEYNYS----IEHARFQC--------ILQEKSIIQITC 384
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
G S A+++ G+L+ WG QLGV L P P
Sbjct: 385 GDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTP 421
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 8/172 (4%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S+P +V+ L V ++ G F + L E+G LW WG N +LG GD
Sbjct: 180 PGDIKQISVPVRVQGLE-NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSY 238
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK----VPMVI 137
P + L D+ ++ IA GG+HS ALT++G+V+ WG G HG+LG F N K +P +
Sbjct: 239 PIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLG--FGDNDKSSKMLPQKV 296
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
L E + ++CGG+ S A+T G+++ +G +LG G V P+E
Sbjct: 297 NLLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY-GRKVTTGQPLE 347
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 30/180 (16%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
L+ WG +E G+LG G + S P V+ L + + ++ GG+ + LT EG++
Sbjct: 217 LWAWGNNE-YGQLGTG------DTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEV 269
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYHSLALTDDGKVFSWG 116
+ WG + LG GD K+LP V++ IIQ++ GG HS+ALT DG++FS+G
Sbjct: 270 YGWGRGEHGRLGFGDNDK--SSKMLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSFG 327
Query: 117 YGGHGQLGH----SFTQNQKVPMVIEALADEF------------VTHIACGGSTSAAVTE 160
G HG+LG+ + Q ++P+ I F H+ACGG + A+ E
Sbjct: 328 RGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 16/177 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+ WG E +G+LGLG + S V AL P V +V G ++ + ++G+L
Sbjct: 7 VIAWGSGE-DGQLGLGTDEEKE------LASVVDALEPFNVRSVVGGSRNSLAICDDGKL 59
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N LG P L+ +L +V+I+Q A G +H LA+ D G+ ++WG
Sbjct: 60 FTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNE 119
Query: 120 HGQLGHSFTQNQ-----KVPMVIEALADEFVT--HIACGGSTSAAVTEKGKLYMWGN 169
+GQ G ++++ + +VI + +T +A GG+ S +T +G ++ WG
Sbjct: 120 YGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ 176
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V +WG G GQLG + +++ V++AL V + G S A+ + GKL+ WG +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 172 DSQLGVPGLPVVQPCP 187
LG P + P
Sbjct: 67 RGTLGHPPETKTESTP 82
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 105/178 (58%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG N L +P K++A VP+ V+ G ++ +TE G+
Sbjct: 139 EVQSWGRNQ-NGQLGLG-----NTEDSL-VPQKIQAFKGVPIKMVAAGAEHSVAITENGE 191
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR W P+ + ++ +++ +A G H+++++ G ++++G+
Sbjct: 192 LYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSK 251
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH ++ VP ++AL+D+ ++ ++ G S A+T G L+ WG K Q+GV
Sbjct: 252 YGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGV 309
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTE-EGQLW 61
+WGR E +G+LG G + +P+++ AL + +++CG T+ +E +L+
Sbjct: 37 SWGRGE-DGQLGHG------DTDDRPLPTQLSALDAQHIDSIACGADHTLAYSESRNELY 89
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ P+ + L +RI QIA G H LA+T +G+V SWG +G
Sbjct: 90 SWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNG 149
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+A + +A G S A+TE G+LY WG + LG+
Sbjct: 150 QLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGL 205
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + GRLG G + L IP + AL + + ++CG + +T EG+
Sbjct: 87 ELYSWGWGD-FGRLGHG------NSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGE 139
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G+ P+ + V I +A G HS+A+T++G+++ WG+G
Sbjct: 140 VQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGR 199
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ P + ++ + + +ACG + +V+ G +Y +G +K QLG
Sbjct: 200 YGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLG 256
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P K++AL ++ VS G +M LT G L+ WG N ++G GD + P +
Sbjct: 265 VPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFP 324
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
D R++QI+ G H++A+T+ VFSWG G +GQLGH T ++ P +IEAL+
Sbjct: 325 QDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEALS 377
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P V +S G T+ L + +WG + +LG GD P L L I IA
Sbjct: 13 PSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIA 72
Query: 98 NGGYHSLALTDD-GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
G H+LA ++ +++SWG+G G+LGH + + +P I AL + IACG S
Sbjct: 73 CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCL 132
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
AVT +G++ WG ++ QLG+
Sbjct: 133 AVTMEGEVQSWGRNQNGQLGL 153
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG E + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----ECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG +G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG Q Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 100/179 (55%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG+++ G+LGLG +S P +++L +P A +S GG + +T G
Sbjct: 157 QVFSWGQNQF-GQLGLGM-----HGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D W P LL +L R+I ++ G H+ ALT +G VF++G GG
Sbjct: 211 VFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT-EKGKLYMWGNAKDSQLGV 177
+GQLGH+ T ++ P + L VT I+CG + A T GK+Y +G + QLG
Sbjct: 271 YGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLGT 329
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 17/182 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+ WG + G+LGLG G +E + P K + V V CG T+ L ++G +
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVIE-PRKCEFFHGKKVCDVGCGLKHTVFLLDDGTV 55
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLV---DVRIIQIANGG-YHSLALTDDGKVFSWG 116
+ G N +LG+ +G KP+ P V D +II +GG H+LAL D G++FSWG
Sbjct: 56 YTCGCN---DLGQ---LGHEKPRKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWG 109
Query: 117 YGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G GQLG ++F + +VP I+ L+D + +ACG S A+++ G+++ WG + QL
Sbjct: 110 LGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQL 169
Query: 176 GV 177
G+
Sbjct: 170 GL 171
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVPV-AAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNL 88
P V AL + AVS G T+ L ++GQ+++WG S+ +LG + + P+ + L
Sbjct: 75 PEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTH 147
DV+I Q+A G HS AL+ G+VFSWG GQLG + P +I++L
Sbjct: 135 SDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
++ GG+ S A+T G ++ WG K QLG+
Sbjct: 195 LSAGGAHSFAITLSGAVFGWGRNKFGQLGL 224
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 9/135 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ P+ +K+L V VSCG T LT+EG +
Sbjct: 211 VFGWGRNKF-GQLGL------NDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QI+ G H+LA T GK++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVP 134
+GQLG T N+K P
Sbjct: 324 NGQLGTRSTCNRKSP 338
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 102/187 (54%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTM 52
LYT DE G LGLG + E P ++ +L +A +S G G +
Sbjct: 76 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIACLSYGSGPHVV 129
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
+ T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 130 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 189
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V +IACG S AV + G++Y+WG
Sbjct: 190 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYN 249
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 250 GNGQLGL 256
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG +M + + G
Sbjct: 189 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTG 241
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 242 EVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 301
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 302 SYGQLGTGNKSNQSYPTPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTL 361
Query: 178 PGL 180
P L
Sbjct: 362 PHL 364
>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 393
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 102/187 (54%), Gaps = 13/187 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LYTWG +E G G + SIP V AL + + +SCG + T + EEG+
Sbjct: 66 KLYTWGSNEYHQL-----GHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGK 120
Query: 60 L--WNWGANSNYELGRGDRVGGWK---PKLLPNLVD--VRIIQIANGGYHSLALTDDGKV 112
L W WG ++ G GG P+L+ LVD V + + G H++ALT DG++
Sbjct: 121 LFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEI 180
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
++WG G +G+LG+ + N +VP +E ADE + I+ G + A+TE G++Y WG
Sbjct: 181 WAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSWGINSH 240
Query: 173 SQLGVPG 179
SQLG+ G
Sbjct: 241 SQLGLGG 247
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 15/179 (8%)
Query: 1 ELYTWG--RDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLT 55
+L+TWG +G LG G +E SIP V+ L VPV +V CG T+ LT
Sbjct: 120 KLFTWGWGGSTMKGSGALGHAGGEDE----SIPRLVRTLVDQGVPVKSVECGELHTVALT 175
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
++G++W WG LG G P+ + D I I+ G + A+T+ G+V+SW
Sbjct: 176 KDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSW 235
Query: 116 GYGGHGQLGH------SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G H QLG + + +P+V+EAL++ V ++ G +AAVT GK++MWG
Sbjct: 236 GINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWG 294
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 91/159 (57%), Gaps = 10/159 (6%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIAN 98
+A + G + + +EG+L+ WG+N ++LG G + P+++ L ++I+ I+
Sbjct: 48 IAKLDFGATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISC 107
Query: 99 GGYHSLALTDDGKVFSWGYG-----GHGQLGHSFTQNQKVPMVIEALADEF--VTHIACG 151
G YH+ A+ ++GK+F+WG+G G G LGH+ +++ +P ++ L D+ V + CG
Sbjct: 108 GEYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECG 167
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQ-PCPVE 189
+ A+T+ G+++ WGN + +LG + P PVE
Sbjct: 168 ELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVE 206
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + +LGLG G + +IP V+AL V VA VS G +T +G+
Sbjct: 231 EVYSWGINS-HSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGK 289
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WGA E P + L D II + G Y++ AL+ G +F++G G
Sbjct: 290 MFMWGAKLWLE-----------PHEMTILKDETIISVQCGRYYTAALSASGNLFTFGKGH 338
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
LGH + Q P+++E+L V + CG S A+T+
Sbjct: 339 SNCLGHGERKTQLQPLLVESLNRYNVVSMTCGYSHMGALTK 379
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 10/125 (8%)
Query: 54 LTEEGQLWNWGANSNYELGRG--DRVG------GWKPKLLPNLVDVRIIQIANGGYHSLA 105
++ + ++ WG + +LG G ++ G P++L I ++ G HS A
Sbjct: 1 MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60
Query: 106 LTDDGKVFSWGYGGHGQLGH-SFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
+ +GK+++WG + QLGH S Q+ Q +P V++AL + I+CG + AV E+GK
Sbjct: 61 IDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGK 120
Query: 164 LYMWG 168
L+ WG
Sbjct: 121 LFTWG 125
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 106 LTDDGKVFSWGYGGHGQLGH-SFTQN-------QKVPMVIEALADEFVTHIACGGSTSAA 157
++ VF+WG G GQLGH SF + + P ++E + + + G + SAA
Sbjct: 1 MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60
Query: 158 VTEKGKLYMWGNAKDSQLG 176
+ ++GKLY WG+ + QLG
Sbjct: 61 IDKEGKLYTWGSNEYHQLG 79
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG+++ G+LGLG +E S P +K+L +P A ++ GG + LT G +
Sbjct: 158 IYSWGQNQ-YGQLGLG-----SEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAI 211
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG N +LG D P LL +L +II I G H+ ALT +G VF++G GG+
Sbjct: 212 FGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH+ ++ P + L VT IACG T A V G++Y +G + QLG+
Sbjct: 272 GQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGI 329
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVPV-AAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNL 88
P +V AL + AVSCG T+ L ++GQ+++WG ++ ++G + P+ + +L
Sbjct: 75 PEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G +HSLAL+ + ++SWG +GQLG S + + P I++L+ H
Sbjct: 135 SDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAH 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IA GG S A+T G ++ WG K QLG+
Sbjct: 195 IAAGGGHSFALTISGAIFGWGRNKFGQLGL 224
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V CG T + ++G ++ G N +LG KP+ + L I+ ++ G
Sbjct: 36 VRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDK--SRKKPEQVGALDAQIIVAVSCGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
H+LAL D G+VFSWG+ HGQ+G S ++ +VP I++L+D + +ACG S A++
Sbjct: 94 AHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALS 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
++ +Y WG + QLG+
Sbjct: 154 KESNIYSWGQNQYGQLGL 171
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ S P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+LA G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P +++
Sbjct: 324 NGQLGIGSTSNKKSPSMVK 342
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ + + G H+ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH +++K P + AL + + ++CG + + A+ +KG+++ WG+A Q+GV
Sbjct: 64 GQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGV 118
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 3/169 (1%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S P +V+ L V ++ G F + L+E+ LW WG N +LG GD +
Sbjct: 184 PGDIKQISTPVRVQGLE-KVMMIAVGAFHNLALSEDAVLWAWGNNEYGQLGIGDTQPRSQ 242
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ-NQKVPMVIEAL 140
P + L + ++ IA GG+HS ALT DG+V++WG G HG+LG + + VP+ ++ L
Sbjct: 243 PIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVQLL 302
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
E + ++CGG+ S A+T G+++ +G +LG G V P+E
Sbjct: 303 DGEDIVQVSCGGTHSVALTSDGRIFSYGRGDHGRLGY-GRKVTTGHPME 350
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
L+ WG +E G+LG+G + S P +V+ L + + ++ GG+ + LT++G++
Sbjct: 221 LWAWGNNE-YGQLGIG------DTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEV 273
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVD-VRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG + LG GD L L+D I+Q++ GG HS+ALT DG++FS+G G
Sbjct: 274 YAWGRGEHGRLGFGDDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFSYGRGD 333
Query: 120 HGQLGHSFTQNQKVPMVI 137
HG+LG+ PM +
Sbjct: 334 HGRLGYGRKVTTGHPMEV 351
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 17/178 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+ WG E +G+LG+G G +E +V AL P V+AV G ++ + ++G+L
Sbjct: 10 VLAWGSGE-DGQLGMG---GCDEK---DWAHRVAALDPYAVSAVVAGSRNSLAICDDGRL 62
Query: 61 WNWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N LG P + L V+I+Q A GG+H LA+ D G+ ++WG
Sbjct: 63 FTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDKGRAYAWGGNE 122
Query: 120 HGQLGHSFTQNQ--------KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+GQ G + + +P V +A GG+ S +T++G ++ WG
Sbjct: 123 YGQCGEEPERKEDGTRALRRDIPTPQRCALKLKVQQVAAGGTHSVVLTQEGHVWTWGQ 180
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG+ + +LG G + L + + G +SLA+ DDG++F+WG+ G
Sbjct: 13 WGSGEDGQLGMGGCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICDDGRLFTWGWNQRGT 72
Query: 123 LGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LGH T+ + P +EALA + A GG AV +KG+ Y WG + Q G
Sbjct: 73 LGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCG 127
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V +WG G GQLG + + AL V+ + G S A+ + G+L+ WG +
Sbjct: 10 VLAWGSGEDGQLGMGGCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICDDGRLFTWGWNQ 69
Query: 172 DSQLGVPGLPVVQ--PCPVE 189
LG P + P PVE
Sbjct: 70 RGTLGHPPETKTESSPAPVE 89
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFSWGQNK-YGQLGLGI-----DCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN-QKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VFSWG +GQLG N Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGL 171
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|332030031|gb|EGI69856.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Acromyrmex echinatior]
Length = 2956
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 62/178 (34%), Positives = 97/178 (54%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV---KALPVPVAAVSCGGFFTMVLTEEG 58
+YTWG +G LG G + P + K++ + V +VSCG T+ +T G
Sbjct: 1911 IYTWGSSV-QGCLGTG-----SSVLRYGTPHAICFFKSMKIEVFSVSCGHCHTLAVTNNG 1964
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WGA+ +LG G + P+L+ +L I+ G YHS+ALT DG++F+WG+G
Sbjct: 1965 -IYAWGASQFGQLGLGKVLQCSSPELVTSLAQEIIVDAVAGQYHSVALTADGRIFTWGWG 2023
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
HGQLGH T + +P +++AL V I+ G + + A++ G LY +G QLG
Sbjct: 2024 VHGQLGHGNTDEKAIPSLVKALLGIVVCCISAGYAHTLALSIDGVLYAFGCNILGQLG 2081
Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 12/169 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEEGQ 59
+Y WG + G+LGLG + S P V +L + V AV+ G + ++ LT +G+
Sbjct: 1965 IYAWGASQF-GQLGLG------KVLQCSSPELVTSLAQEIIVDAVA-GQYHSVALTADGR 2016
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG + +LG G+ P L+ L+ + + I+ G H+LAL+ DG ++++G
Sbjct: 2017 IFTWGWGVHGQLGHGNTDEKAIPSLVKALLGIVVCCISAGYAHTLALSIDGVLYAFGCNI 2076
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GQLG VP+ + +L D +T I+ G + AV+ KLY+WG
Sbjct: 2077 LGQLGTGDNIKSSVPIKV-SLPDR-ITLISTGYFHNLAVSNTNKLYIWG 2123
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 48 GFFTMVLTEEGQLWNWGANSNYELGRGD---RVGGWKPKLLPNLVDVRIIQIANGGYHSL 104
GF + L G ++ WG++ LG G R G + + + ++ G H+L
Sbjct: 1899 GFSHVALVRNGNIYTWGSSVQGCLGTGSSVLRYGTPHAICFFKSMKIEVFSVSCGHCHTL 1958
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
A+T++G +++WG GQLG P ++ +LA E + G S A+T G++
Sbjct: 1959 AVTNNG-IYAWGASQFGQLGLGKVLQCSSPELVTSLAQEIIVDAVAGQYHSVALTADGRI 2017
Query: 165 YMWGNAKDSQLG 176
+ WG QLG
Sbjct: 2018 FTWGWGVHGQLG 2029
Score = 36.2 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP 134
+LV +I QI+ G +H+ +T DG +++WG GQ+G+ + +P
Sbjct: 2230 SLVKGQINQISVGCHHNALITKDGSLYTWGRNLDGQIGNGTRREVLIP 2277
>gi|302806118|ref|XP_002984809.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
gi|300147395|gb|EFJ14059.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
Length = 391
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 3/169 (1%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S+P +V+ L V ++ G F + L + G++W WG N +LG GD
Sbjct: 182 PGDIKQISVPVRVQGLE-NVTMIAVGAFHNLALVQHGEVWAWGNNEYGQLGTGDTQPRSS 240
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK-VPMVIEAL 140
P + L + ++ IA GG+HS+ALT DG V+ WG G HG+LG ++ K +P + L
Sbjct: 241 PVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLL 300
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
A E V ++CGG+ S A T G+++ +G +LG G V PVE
Sbjct: 301 AGEPVVQVSCGGTHSVAATISGRMFSFGRGDHGRLGYGG-AVTTGHPVE 348
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WGA + +LG G+ ++ L D ++ + G +SLA+ +DG++F+WG+ G
Sbjct: 10 WGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWGWNQRGT 69
Query: 123 LGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
LGH T+ + P ++ALA+ + A GG AV E+G+ Y WG
Sbjct: 70 LGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGRTYAWG 116
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG +E G+LG G + S P VK L + + ++ GG+ +M LT +G
Sbjct: 218 EVWAWGNNE-YGQLGTG------DTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGA 270
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR----IIQIANGGYHSLALTDDGKVFSW 115
++ WG + LG GD K+LP V + ++Q++ GG HS+A T G++FS+
Sbjct: 271 VYGWGRGEHGRLGFGDDK---SSKMLPQKVHLLAGEPVVQVSCGGTHSVAATISGRMFSF 327
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTH------------------IACGGSTSAA 157
G G HG+LG+ P+ + + H +ACGG + A
Sbjct: 328 GRGDHGRLGYGGAVTTGHPVEVPVSLHHYSRHNIVSEDEANGSTRWVVKLVACGGRHALA 387
Query: 158 V 158
V
Sbjct: 388 V 388
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 18/179 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+ WG E +G+LGLG + + V AL V +V G ++ + E+G+L
Sbjct: 7 VLAWGAGE-DGQLGLGNLQDKDSV------CVVDALRDHNVVSVVAGSRNSLAICEDGRL 59
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N LG P + L +V+I+Q A GG+H LA+ ++G+ ++WG
Sbjct: 60 FTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGRTYAWGGNE 119
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVT--------HIACGGSTSAAVTEKGKLYMWGN 169
+GQ T+ Q+ + L + +A GG+ S +TE+G ++ WG
Sbjct: 120 YGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAGGTHSVVLTEEGHVWTWGQ 178
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V +WG G GQLG Q++ V++AL D V + G S A+ E G+L+ WG +
Sbjct: 7 VLAWGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWGWNQ 66
Query: 172 DSQLGVP 178
LG P
Sbjct: 67 RGTLGHP 73
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 97/178 (54%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAA-VSCGGFFTMVLTEEGQ 59
+L++WG + EG+LGL +P V+AL V V+CG + LT G+
Sbjct: 181 QLFSWGSN-AEGQLGLNSKNLIE-----CVPHMVRALGTSVVVQVACGINHVLALTNNGK 234
Query: 60 LWNWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L++WG+NS+ +LG G V KPKL+ +L V I I GGYHS+A++ G VF WG
Sbjct: 235 LYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKN 294
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG + T+N+ +P ++ L + V + ACG S +T G ++ G QLG
Sbjct: 295 TFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLG 352
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 97/178 (54%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY+WG + +G+LGLG NE P + +L VP+A ++CGG+ +M +++ G
Sbjct: 234 KLYSWGSN-SDGQLGLGTD-VKNEIK----PKLISSLAGVPIAFITCGGYHSMAISKSGA 287
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P+ L L + ++ A G S+ LT DG VF+ G G
Sbjct: 288 VFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGM 347
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH T N+ +P + L VT I+CG T V +G++Y WG QLG
Sbjct: 348 YGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLG 405
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 96/178 (53%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALPVPVAAVSCGGFFTMVLTEEGQL 60
++ WG G LGLG N + +P ++ + ++CG +T+++T +GQ+
Sbjct: 78 MFCWG-STIHGELGLGGIEDEN----ILVPRELDFQKATEIEQIACGENYTVLITRDGQV 132
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++ G N +LG G + +L+P L ++A G +H+LA+ + G++FSWG
Sbjct: 133 YSCGNNDYGQLGHEK--GRKRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAE 190
Query: 121 GQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +S + VP ++ AL V +ACG + A+T GKLY WG+ D QLG+
Sbjct: 191 GQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGL 248
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 6 GRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
G ++G RL L PG V+CG T+ + E GQL++WG+
Sbjct: 144 GHEKGRKRLQLIPGLDA----------------FVFKKVACGAHHTLAVNEWGQLFSWGS 187
Query: 66 NSNYELGRGDR-VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
N+ +LG + + P ++ L ++Q+A G H LALT++GK++SWG GQLG
Sbjct: 188 NAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLG 247
Query: 125 H-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ +N+ P +I +LA + I CGG S A+++ G ++ WG QLG+
Sbjct: 248 LGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLGL 301
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL R N +P +++ L V +CG F++ LT +G +
Sbjct: 288 VFGWGKNTF-GQLGLNDTRNRN------LPRQLQTLQNAKVCYAACGEEFSVFLTVDGGV 340
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA +LG G+ P+ + L+ + QI+ G H+L L G+V++WG GG
Sbjct: 341 FTCGAGMYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGG 400
Query: 120 HGQLGHSFTQNQKVPMVIE 138
GQLG++ T++ P V+
Sbjct: 401 AGQLGNNITRSVATPQVVH 419
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPK--LLPNLVDVR----IIQIANGGYHSLALTDDG 110
+ ++ WG+ + ELG +GG + + L+P +D + I QIA G +++ +T DG
Sbjct: 75 DKNMFCWGSTIHGELG----LGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDG 130
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+V+S G +GQLGH + +K +I L +ACG + AV E G+L+ WG+
Sbjct: 131 QVYSCGNNDYGQLGHE--KGRKRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSN 188
Query: 171 KDSQLGVPGLPVVQPCP 187
+ QLG+ +++ P
Sbjct: 189 AEGQLGLNSKNLIECVP 205
>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
Length = 719
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 99/189 (52%), Gaps = 14/189 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCG-GFFTMVLTEEGQL 60
++TWG +E G+LG+G N P++V L + A+S G + M L+E G +
Sbjct: 104 VWTWGANE-NGQLGIGTITNVNA------PAQVPGLS-GIKAISGGLAYHGMALSENGTV 155
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG N N ELG G P L+ L DV IA GGY+SLAL DG V++WG G
Sbjct: 156 WTWGKNDNGELGNGTTTQQNSPVLVAGLSDV--TAIAAGGYYSLALKSDGTVWAWGVNGS 213
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
G+LG T + VP+ + L D V IA GGS S A+ + G ++ WGN LG G
Sbjct: 214 GELGDGTTTERHVPVQVAGLTD--VMAIAAGGSHSLAIRQDGTVWAWGNNTYGTLG-DGT 270
Query: 181 PVVQPCPVE 189
+ PV+
Sbjct: 271 RTHRTRPVQ 279
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 13/188 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++TWG+++ G LG G N P V L V A++ GG++++ L +G +W
Sbjct: 155 VWTWGKND-NGELGNGTTTQQNS------PVLVAGLS-DVTAIAAGGYYSLALKSDGTVW 206
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N + ELG G P + L DV + IA GG HSLA+ DG V++WG +G
Sbjct: 207 AWGVNGSGELGDGTTTERHVPVQVAGLTDV--MAIAAGGSHSLAIRQDGTVWAWGNNTYG 264
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG-L 180
LG ++ P+ + L + + +A GG S AV + G ++ WG+ QLG+
Sbjct: 265 TLGDGTRTHRTRPVQVRNL--QHIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSNA 322
Query: 181 PVVQPCPV 188
+ P PV
Sbjct: 323 SSLIPVPV 330
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 16/191 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG + G+LG G + P K L V + G +M L ++G +
Sbjct: 53 EVYSWGYGD-RGQLGDGTWNTR------TTPVMAKNLN-HVIDIHSGVRSSMALRQDGTV 104
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG--YHSLALTDDGKVFSWGYG 118
W WGAN N +LG G P +P L ++ I +GG YH +AL+++G V++WG
Sbjct: 105 WTWGANENGQLGIGTITNVNAPAQVPGLSGIKAI---SGGLAYHGMALSENGTVWTWGKN 161
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+G+LG+ T Q P+++ L+D VT IA GG S A+ G ++ WG +LG
Sbjct: 162 DNGELGNGTTTQQNSPVLVAGLSD--VTAIAAGGYYSLALKSDGTVWAWGVNGSGELG-D 218
Query: 179 GLPVVQPCPVE 189
G + PV+
Sbjct: 219 GTTTERHVPVQ 229
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 5/147 (3%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
+P +V L V A++ GG ++ + ++G +W WG N+ LG G R +P + NL
Sbjct: 226 VPVQVAGL-TDVMAIAAGGSHSLAIRQDGTVWAWGNNTYGTLGDGTRTHRTRPVQVRNLQ 284
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
I+ +A GGYHSLA+ G V+SWG QLG S + +P+ + + E V I+
Sbjct: 285 --HIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSNASSLIPVPVTGI--EHVREIS 340
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GG S A+ + G ++ WG QLG
Sbjct: 341 AGGFHSVAMKKDGTVWGWGYNSGGQLG 367
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD 90
P +V+ L + AV+ GG+ ++ + + G +W+WG NS +LG P + +
Sbjct: 277 PVQVRNLQ-HIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSNASSLIPVPVTGIEH 335
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIA 149
VR +I+ GG+HS+A+ DG V+ WGY GQLG ++ + +P + +A+ D
Sbjct: 336 VR--EISAGGFHSVAMKKDGTVWGWGYNSGGQLGDGTYNNTRGIPTLTKAVLDTTSPDTG 393
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDS 173
G ++T W A D+
Sbjct: 394 SGSLNPHSITSDSVALEWPKASDN 417
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
++ G YH+ +L G+V+SWGYG GQLG + P++ + L V I G +
Sbjct: 37 KLVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNL--NHVIDIHSGVRS 94
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
S A+ + G ++ WG ++ QLG+
Sbjct: 95 SMALRQDGTVWTWGANENGQLGI 117
>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
Length = 667
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 101/189 (53%), Gaps = 14/189 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCG-GFFTMVLTEEGQL 60
++TWG +E G+LG+G N +P+ V L + A+S G G+ +M LTE G +
Sbjct: 105 VWTWGSNE-NGQLGIGTTADKN------VPTPVSGLS-GIKAISGGLGYHSMALTENGTV 156
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG N N ELG G V P L+ L DV IA GGY+SLAL DG +++WG G+
Sbjct: 157 WTWGKNDNGELGNGTTVQQNSPVLVIGLSDV--TAIAAGGYYSLALKSDGTIWAWGANGN 214
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
G+LG ++ P+ + L+D V I GGS S A+ + G ++ WG LG G
Sbjct: 215 GELGDGTIVDKHTPVQVSGLSD--VIAITAGGSHSLAIKQDGTVWAWGINMYGTLG-DGT 271
Query: 181 PVVQPCPVE 189
+ PV+
Sbjct: 272 RTNRTIPVK 280
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 94/176 (53%), Gaps = 12/176 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++TWG+++ G LG G N P V L V A++ GG++++ L +G +W
Sbjct: 156 VWTWGKND-NGELGNGTTVQQNS------PVLVIGLS-DVTAIAAGGYYSLALKSDGTIW 207
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WGAN N ELG G V P + L DV I I GG HSLA+ DG V++WG +G
Sbjct: 208 AWGANGNGELGDGTIVDKHTPVQVSGLSDV--IAITAGGSHSLAIKQDGTVWAWGINMYG 265
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
LG N+ +P+ + L + + IA GG S A+ ++G ++ WG+ QLG+
Sbjct: 266 TLGDGTRTNRTIPVKVRNL--QHIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGL 319
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 2 LYTWGRDEGEGRLGLGP---GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
++ WG + G G LG G P + GLS V A++ GG ++ + ++G
Sbjct: 206 IWAWGAN-GNGELGDGTIVDKHTPVQVSGLS----------DVIAITAGGSHSLAIKQDG 254
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W WG N LG G R P + NL ++ IA GG+HSLAL +G V+ WG
Sbjct: 255 TVWAWGINMYGTLGDGTRTNRTIPVKVRNLQHIK--AIAGGGHHSLALDQEGNVWGWGDN 312
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG ++ P + + E V IA GG SAA+ + G+++ WG Q+G
Sbjct: 313 SRGQLGLGHNSSRTTPEQLTGI--EHVLDIAGGGFHSAALKKDGRVWGWGLNSSGQIG 368
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 16 LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD 75
LG G N +IP KV+ L + A++ GG ++ L +EG +W WG NS +LG G
Sbjct: 267 LGDGTRTNR----TIPVKVRNLQ-HIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGH 321
Query: 76 RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
P+ L + ++ IA GG+HS AL DG+V+ WG GQ+G ++ P
Sbjct: 322 NSSRTTPEQLTGIE--HVLDIAGGGFHSAALKKDGRVWGWGLNSSGQIGDGTRNDRNAPA 379
Query: 136 VIEALAD 142
+ +A+ D
Sbjct: 380 LTKAVLD 386
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 46 CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR----IIQIANGGY 101
G + T L G ++ WG ++G W + P V R ++ I G
Sbjct: 41 AGYYHTASLVSSGDVYVWGQGDRGQIGDA----AWNARNTP--VQARGLNDVMDIHTGVR 94
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTE 160
++AL DG V++WG +GQLG T ++ VP + L+ + I+ G G S A+TE
Sbjct: 95 STMALRSDGTVWTWGSNENGQLGIGTTADKNVPTPVSGLSG--IKAISGGLGYHSMALTE 152
Query: 161 KGKLYMWGNAKDSQLGVPGLPVVQPCPV 188
G ++ WG + +LG G V Q PV
Sbjct: 153 NGTVWTWGKNDNGELG-NGTTVQQNSPV 179
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 11/173 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +SIP ++ L V V GG ++ +T EG++++WG +
Sbjct: 2932 GRLGLG------NTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGID 2985
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG GD P L+ L I++IA G HS A+T DG++++WG G +G+LGH +
Sbjct: 2986 GKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGDS 3045
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +P ++AL D V IACG + + A+T+ ++ WG+ +LG G
Sbjct: 3046 KTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGG 3098
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 67/180 (37%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG + GRLG G ++ L IP +VKAL V ++CG T+ LT+
Sbjct: 3028 ELYTWGLGD-YGRLGHG------DSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDN 3080
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P+ + L + +IA G SLAL+ GKV++WG
Sbjct: 3081 NCVWSWGDGDFGKLGRGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGK 3140
Query: 118 GGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P +IE L + +T IA G AVT+ G++Y WG+ Q G
Sbjct: 3141 GDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQG 3200
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP K+ AL V ++CG F++ L+ G++
Sbjct: 3083 VWSWG-DGDFGKLGRGGSEGCN------IPQKIDALCGRDVCRIACGAQFSLALSTTGKV 3135
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
W WG Y LG G+ P+L+ L RI +IA G H LA+TD G+V+SWG
Sbjct: 3136 WTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDND 3195
Query: 120 HGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQ G+ T K P + D ++HIACG S S A +L + S + VP
Sbjct: 3196 HGQQGNGNTTVNKRPQICLGELDGVKISHIACGSSHSIAWCGNLQLTV------SYVPVP 3249
Query: 179 GLPVVQP 185
L V P
Sbjct: 3250 MLSVKDP 3256
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 14/180 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG +G GRLG G R P VK L + ++CG ++ +T G+L
Sbjct: 534 VYSWGSGDG-GRLGHGDIRRE--------PELVKELVNKKITQIACGSTYSAAVTSNGEL 584
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG S LG G+ P L+ L ++ +A +G H+LA+ DG V+SWG G
Sbjct: 585 YTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDG 644
Query: 119 GHGQLGHSFTQNQKVPMVIEALA--DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + KVP V+E L ++++ ++ CG S A+ + G ++ WG + +LG
Sbjct: 645 DYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLG 704
Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 5/189 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWG+ GRLG G G ++ + +K+ V A G T+ +T++ +
Sbjct: 3929 ELYTWGKGR-YGRLGHGDG---DDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCV 3984
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG +LGRG G KP + +L+ + + ++ G S+ALT +G +++WG G +
Sbjct: 3985 WSWGDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDY 4044
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+LGH + + P + L + + +A G A T+ G+++ WG+ + QLG L
Sbjct: 4045 YRLGHGTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTL 4104
Query: 181 -PVVQPCPV 188
P+ +P V
Sbjct: 4105 NPIPEPTLV 4113
Score = 89.4 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 47/152 (30%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
I ++ L + +V GG MVLT ++++WG + +LG GD++ P+ + L+
Sbjct: 3848 IIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRKIEALL 3907
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
+I+ I+ G HS A+T G++++WG G +G+LGH + P ++EAL V +A
Sbjct: 3908 GKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKSYKVIDVA 3967
Query: 150 CGG--STSAAVTEKGKLYMWGNAKDSQLGVPG 179
CG + + A+T+ ++ WG+ +LG G
Sbjct: 3968 CGSGDAQTLAITDDDCVWSWGDGDYGKLGRGG 3999
Score = 86.3 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
A + G + L+ +G +++WG+ LG GD +P+L+ LV+ +I QIA G +
Sbjct: 517 AANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDIRR--EPELVKELVNKKITQIACGSTY 574
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S A+T +G++++WG G +G+LGH ++++ +P ++ L+ V +ACG + + A+ +
Sbjct: 575 SAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDK 634
Query: 161 KGKLYMWGNAKDSQLGVPG 179
G ++ WG+ +LG G
Sbjct: 635 DGIVWSWGDGDYGKLGRGG 653
Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 64/180 (35%), Positives = 96/180 (53%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTM-VLTEEG 58
+ Y WG + G+LG G + I + AL P VA GG T+ +LT EG
Sbjct: 3771 KFYVWGHNH-RGQLG---GVQGTKVKSPVINDIIAALRPTAVA----GGEQTLFILTSEG 3822
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI--IQIANGGYHSLALTDDGKVFSWG 116
+++ G + LG G P ++ L ++I + + +GG H++ LT + +VFSWG
Sbjct: 3823 KVYASGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWG 3882
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH + + P IEAL + + HI+CG S SAA+T KG+LY WG + +LG
Sbjct: 3883 DGEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLG 3942
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEG 58
+++WG D G+LG RG ++ +P V+ L + V CG F++ L ++G
Sbjct: 638 VWSWG-DGDYGKLG----RGGSDC--CKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDG 690
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W WG + Y LG G PK++ L++ I+ IA G H LALTD+ ++F+WG
Sbjct: 691 TVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWGSD 750
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
S N + P I A+ EF+ +ACG + + T GKL
Sbjct: 751 VQKYALSSDNYNME-PTCISAINKEFIAGVACGPAQNFLWTSGGKL 795
Score = 83.6 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G + P ++++L + V V CG F++ LT+ G L
Sbjct: 3984 VWSWG-DGDYGKLGRGGSDGCKK------PLRIESLIGMAVCKVECGSQFSVALTKNGDL 4036
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG Y LG G +P+ + L +I+ +A G H +A TD G+VF+WG
Sbjct: 4037 YTWGKGDYYRLGHGTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDE 4096
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG+ P ++ L + + + CG + S A
Sbjct: 4097 GQLGNGTLNPIPEPTLVTVLENVKLNRVGCGSAHSFA 4133
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/174 (32%), Positives = 88/174 (50%), Gaps = 12/174 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G N L +P+ V L V V+CG T+ + ++
Sbjct: 583 ELYTWGRGS-YGRLGHG-----NSEDRL-LPTLVAGLSGSHVVDVACGSGDAHTLAIDKD 635
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLV--DVRIIQIANGGYHSLALTDDGKVFSW 115
G +W+WG +LGRG PK++ L + I+ + G S+AL DG V++W
Sbjct: 636 GIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTW 695
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G +LGH + + P ++E L + + IA G S A+T+ +++ WG+
Sbjct: 696 GKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWGS 749
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 57 EGQLWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
+ +++ WG N +LG +G +V P + N+ +R + IA G +T DGKV+
Sbjct: 2868 DSRVFVWGLNDKGQLGGCKGSKVK--SPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYV 2925
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKD 172
G G +G+LG T+N +P+ ++ L FV + GG S +T +GK++ WG D
Sbjct: 2926 SGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGID 2985
Query: 173 SQLG 176
+LG
Sbjct: 2986 GKLG 2989
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 50/166 (30%)
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK--- 111
T + ++ WG N N+ LG G K + + ++ I QI + +ALT++G+
Sbjct: 437 TPKTEVLGWG-NINW-LGGESNDGSLK--IYETVAELGIKQIMCSSDNIIALTNNGRVYS 492
Query: 112 -----------------------------------------VFSWGYGGHGQLGHSFTQN 130
V+SWG G G+LGH +
Sbjct: 493 LAYNARCEAPVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDIRR 552
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ P +++ L ++ +T IACG + SAAVT G+LY WG +LG
Sbjct: 553 E--PELVKELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLG 596
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 33/69 (47%)
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
D +VF WG GQLG K P ++ +A IA G T VT GK+Y+ G
Sbjct: 2868 DSRVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSG 2927
Query: 169 NAKDSQLGV 177
+ +LG+
Sbjct: 2928 EGANGRLGL 2936
>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
caballus]
Length = 988
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG EG+LG G +G N P K+K L + + VSCG + ++ L+E GQ+
Sbjct: 67 VFAWGAGS-EGQLGTGEVKGIN-----FTPKKIKTLTGIKIIQVSCGDYHSLALSEGGQV 120
Query: 61 WNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG NS +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 121 FSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNS 180
Query: 120 HGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQL G++ P I AL + V +I+CG +A +T+ GK++ +G+ QLG
Sbjct: 181 AGQLALSGNNVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLG 240
Score = 99.0 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 57/158 (36%), Positives = 89/158 (56%), Gaps = 7/158 (4%)
Query: 31 PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG-GWKPKLLPNL 88
P ++ L + V+ VSCG ++ + G+++ WGA S +LG G+ G + PK + L
Sbjct: 37 PEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTL 96
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ--LGHSFTQNQKVPMVIEALADEFVT 146
++IIQ++ G YHSLAL++ G+VFSWG GQ LG F +Q P + +L +
Sbjct: 97 TGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFP-SQDSPQRVRSLEGIPLA 155
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--LPV 182
+A GG+ S A++ G + WGN QL + G +PV
Sbjct: 156 QVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPV 193
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/173 (32%), Positives = 95/173 (54%), Gaps = 12/173 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ +G+LGLG E P +V++L +P+A V+ GG + L+ G
Sbjct: 119 QVFSWGKNS-QGQLGLG-----KEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALSVSGT 172
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG NS +L G V +KP+ + L ++ +I I+ G H+ LT +GKVF++G
Sbjct: 173 SFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFG 232
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWG 168
GQLGHS + + P ++E + D V+ I CG T A V G++ +G
Sbjct: 233 DNSCGQLGHSPSAQDRGPQLVERI-DGLVSQIDCGSYHTLAYVYTTGQVVSFG 284
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG E + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----ECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG +G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG Q Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++IIQ+A G YHSLAL+ +VF WG +GQLG + + Q P +I++L
Sbjct: 135 SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
Length = 363
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%)
Query: 40 PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG 99
V +SCG + V+T G+L+ +G N +LG G+ KP ++ L ++ +A G
Sbjct: 36 AVVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACG 95
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
H++A T+ G ++S+G GG GQLGH ++ VP +IE L + H+ACG SAA+T
Sbjct: 96 RNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAAIT 155
Query: 160 EKGKLYMWGNAKDSQLGV 177
E G+LY WG+ + Q G+
Sbjct: 156 ENGELYTWGSCGEGQNGL 173
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LYT+G ++ G+LG G + + PS VK L P V V+CG T+ TE G
Sbjct: 55 KLYTFGCNDW-GQLGHGNTKS------YTKPSVVKKLKPEKVYMVACGRNHTIAATESGH 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+++G + +LG GD PK++ L + +A G S A+T++G++++WG G
Sbjct: 108 LYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAAITENGELYTWGSCG 167
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ G ++ ++P + V ++CG A VTE G LYM G + +LG+
Sbjct: 168 EGQNG--LGEDTEIPTRLHLHGK--VRMVSCGYYHMAVVTEDGSLYMCGEKEGGKLGL 221
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 12/179 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWG GEG+ GLG IP+++ L V VSCG + V+TE+G L
Sbjct: 159 ELYTWGSC-GEGQNGLGED--------TEIPTRLH-LHGKVRMVSCGYYHMAVVTEDGSL 208
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ G +LG +L ++ +++ A G + +T +G V+++G G
Sbjct: 209 YMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVYTFGQGN 268
Query: 120 HGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG S + P I ++CG S +A +T+ G LY +G+ + +LG+
Sbjct: 269 QGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRHGKLGL 327
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 81 KPKLLPNLV------DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP 134
K + NL D ++ ++ G HS +T +GK++++G GQLGH T++ P
Sbjct: 19 KTRFADNLANKFWIRDDAVVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKP 78
Query: 135 MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V++ L E V +ACG + + A TE G LY +G D QLG
Sbjct: 79 SVVKKLKPEKVYMVACGRNHTIAATESGHLYSFGCGGDGQLG 120
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LY G EG G+LGL + N S K+K++ V +CG FT V+T+ G ++
Sbjct: 208 LYMCGEKEG-GKLGLDHEQLDN----TSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVY 262
Query: 62 NWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+G + +LG G + + P+ +P V+ ++ G + +T G ++++G G H
Sbjct: 263 TFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRH 322
Query: 121 GQLG---HSFTQNQKVPMVIEALADEFVTHIACGG 152
G+LG F+ K P ++ + V + CGG
Sbjct: 323 GKLGLGDECFSNTFK-PEKVKRFNNFTVKMVTCGG 356
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Hydra magnipapillata]
Length = 364
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 102/192 (53%), Gaps = 18/192 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
E+Y WG + G+LGLG N+A P +V +P + +VSCG FT++LT +G+
Sbjct: 144 EVYAWGSNNC-GQLGLGISN--NQA----TPKRVSLIPSKKIVSVSCGQSFTVMLTTDGE 196
Query: 60 LWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L++WG N N +LG + +P ++ +L I +I G H L LTD G+++SWG
Sbjct: 197 LYSWGYNGNGQLGIENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDIGELYSWGAN 256
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACG--GSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG T N VP +I D+ + IA SA VT GK+YMWG+
Sbjct: 257 SYGQLGLGTTHNTSVPTLINTTTDDRWSDIAAHHYNHISAGVTISGKIYMWGHCH----- 311
Query: 177 VPGLPVVQPCPV 188
GL ++ P V
Sbjct: 312 --GLTILSPREV 321
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 22/184 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV------PVAAVSCGGFFTMVL 54
ELY+WG G G+LG S+ K+ PV V V+CG + ++ L
Sbjct: 95 ELYSWGHG-GYGQLGH--------------TSEEKSKPVLVYMQKKVIQVACGSYHSIAL 139
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
TE+G+++ WG+N+ +LG G PK + + +I+ ++ G ++ LT DG+++S
Sbjct: 140 TEDGEVYAWGSNNCGQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYS 199
Query: 115 WGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
WGY G+GQLG NQ P+ V +L +F+ I CG + +T+ G+LY WG
Sbjct: 200 WGYNGNGQLGIENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDIGELYSWGANSYG 259
Query: 174 QLGV 177
QLG+
Sbjct: 260 QLGL 263
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 12/179 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCG-GFFTMVLTEEG 58
++Y G + G G LG+G G E P ++ L + ++ G G + +T+ G
Sbjct: 42 DVYALGFN-GNGCLGVGDGSSTLE------PKIIEQLCQKDIVQLAYGMGPHVLAVTDSG 94
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+L++WG +LG KP L+ + ++IQ+A G YHS+ALT+DG+V++WG
Sbjct: 95 ELYSWGHGGYGQLGHTSEEKS-KPVLV--YMQKKVIQVACGSYHSIALTEDGEVYAWGSN 151
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + NQ P + + + + ++CG S + +T G+LY WG + QLG+
Sbjct: 152 NCGQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNGNGQLGI 210
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 7/160 (4%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLT-EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
IPS + A V A V G +LT G ++ G N N LG GD +PK++ L
Sbjct: 13 IPSSL-ATKVKKAFVFGGAGNEALLTLTNGDVYALGFNGNGCLGVGDGSSTLEPKIIEQL 71
Query: 89 VDVRIIQIANG-GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
I+Q+A G G H LA+TD G+++SWG+GG+GQLGH+ + K +V + V
Sbjct: 72 CQKDIVQLAYGMGPHVLAVTDSGELYSWGHGGYGQLGHTSEEKSKPVLV---YMQKKVIQ 128
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
+ACG S A+TE G++Y WG+ QLG+ G+ Q P
Sbjct: 129 VACGSYHSIALTEDGEVYAWGSNNCGQLGL-GISNNQATP 167
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG E + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----ECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG +G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG Q Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH+ T ++ P + L VT +ACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + AV+CG T+ L ++GQ++ WG +S+ +LG +G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG Q Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ +A G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + +ACG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNK-FGQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + Q+A G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|307176968|gb|EFN66274.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Camponotus floridanus]
Length = 1719
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 63/179 (35%), Positives = 96/179 (53%), Gaps = 6/179 (3%)
Query: 2 LYTWGRD-EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+YTWG +G LG G G +++ V V +VSCG T+ +T G +
Sbjct: 833 IYTWGSSVQG----CLGTGSSVLRYGAPHAICFFRSMEVEVFSVSCGHCHTLAVTNNG-I 887
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG++ +LG G + P+L+ +L II G YHS+ALT DG+VF+WG+G H
Sbjct: 888 YAWGSSQFGQLGLGKVLQCSSPELIISLAQEIIIDAVAGQYHSVALTADGRVFTWGWGIH 947
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH T + P ++ AL V I+ G + + A++ G +Y +G+ QLG+ G
Sbjct: 948 GQLGHGNTDEKITPSLVTALLGVVVRCISAGYAHTLALSVDGIVYAFGSNVLGQLGIGG 1006
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 12/169 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEEGQ 59
+Y WG + G+LGLG + S P + +L + + AV+ G + ++ LT +G+
Sbjct: 887 IYAWGSSQF-GQLGLG------KVLQCSSPELIISLAQEIIIDAVA-GQYHSVALTADGR 938
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG + +LG G+ P L+ L+ V + I+ G H+LAL+ DG V+++G
Sbjct: 939 VFTWGWGIHGQLGHGNTDEKITPSLVTALLGVVVRCISAGYAHTLALSVDGIVYAFGSNV 998
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GQLG +P I +L D + I G + A+++ KLY+WG
Sbjct: 999 LGQLGIGGNAKSSIPTKI-SLPDGIIL-INTGYFHNLALSDTNKLYVWG 1045
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGRGD---RVGGWKPKLLPNLVDVRIIQIANGGYHS 103
GF + L G ++ WG++ LG G R G ++V + ++ G H+
Sbjct: 820 AGFSHVALIRNGNIYTWGSSVQGCLGTGSSVLRYGAPHAICFFRSMEVEVFSVSCGHCHT 879
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
LA+T++G +++WG GQLG P +I +LA E + G S A+T G+
Sbjct: 880 LAVTNNG-IYAWGSSQFGQLGLGKVLQCSSPELIISLAQEIIIDAVAGQYHSVALTADGR 938
Query: 164 LYMWGNAKDSQLG 176
++ WG QLG
Sbjct: 939 VFTWGWGIHGQLG 951
Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 84 LLPNLVDVRII-----QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP 134
L P++VD +I QI+ G +H+ +T DG +++WG GQLG+ + +P
Sbjct: 1134 LKPSIVDTSLIRGQITQISAGCHHNALITKDGSLYTWGRNLDGQLGNGTRKEVPIP 1189
>gi|340721977|ref|XP_003399389.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like isoform 2
[Bombus terrestris]
Length = 506
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 96/172 (55%), Gaps = 4/172 (2%)
Query: 21 GPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVG 78
G +A P KV+AL + + G G + LTEEG++++WG NS+ ELG
Sbjct: 33 GTGDACNTFYPKKVEALCGKNIKTFAYGKGPHVLALTEEGKVYSWGHNSHGELGNCSTNH 92
Query: 79 GWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE 138
+ NL D I+ IA G +HSLALT++GKV++WG GQ+G S N+ PM +
Sbjct: 93 MIPMPVTKNLNDEFIVDIACGSHHSLALTNEGKVYAWGENTCGQVGKSVNINENTPMKVN 152
Query: 139 A-LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG-LPVVQPCPV 188
+ LA + V I+CG S+S VT+ GK+Y WG QLG+ + V PC V
Sbjct: 153 STLAGKTVICISCGQSSSMTVTDTGKVYGWGCNDVGQLGIGNYVNQVDPCEV 204
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+++T + ++ G+N++ LG GD + PK + L I A G G H LALT++G
Sbjct: 13 LIITRDKIVYALGSNTSGCLGTGDACNTFYPKKVEALCGKNIKTFAYGKGPHVLALTEEG 72
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
KV+SWG+ HG+LG+ T N +PM V + L DEF+ IACG S A+T +GK+Y WG
Sbjct: 73 KVYSWGHNSHGELGNCST-NHMIPMPVTKNLNDEFIVDIACGSHHSLALTNEGKVYAWGE 131
Query: 170 AKDSQLG 176
Q+G
Sbjct: 132 NTCGQVG 138
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 15/179 (8%)
Query: 21 GPNEAGGLSIPSKVKALPVPVAA---------VSCGGFFTMVLTEEGQLWNWGANSNYEL 71
G N G L S +P+PV ++CG ++ LT EG+++ WG N+ ++
Sbjct: 78 GHNSHGELGNCSTNHMIPMPVTKNLNDEFIVDIACGSHHSLALTNEGKVYAWGENTCGQV 137
Query: 72 GRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
G+ + P K+ L +I I+ G S+ +TD GKV+ WG GQLG N
Sbjct: 138 GKSVNINENTPMKVNSTLAGKTVICISCGQSSSMTVTDTGKVYGWGCNDVGQLGIGNYVN 197
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
Q P + L ++ I CG + A++ KG LY+WG QLG+ G+ + PV+
Sbjct: 198 QVDPCEVTTLIEK----IVCGYAHVLALSNKGALYVWGGNNYGQLGL-GMKMNMCNPVQ 251
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV--PVAAVSCGGFFTMVLTEEG 58
++Y WG + G++G N P KV + V +SCG +M +T+ G
Sbjct: 125 KVYAWGENTC-GQVGKSVNINENT------PMKVNSTLAGKTVICISCGQSSSMTVTDTG 177
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N +LG G+ V P + L++ +I G H LAL++ G ++ WG
Sbjct: 178 KVYGWGCNDVGQLGIGNYVNQVDPCEVTTLIE----KIVCGYAHVLALSNKGALYVWGGN 233
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACG--GSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG N P+ ++ V +A S A+ E +++MWG +
Sbjct: 234 NYGQLGLGMKMNMCNPVQLKQEMMGRVLDVATSHYNHISIAMAEGNRIFMWGECMGQSIT 293
Query: 177 VPGLP 181
P L
Sbjct: 294 FPVLT 298
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 101/182 (55%), Gaps = 11/182 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVL-TEEGQLWNWGANSNY 69
G LGLG + E P ++ +L +A +S G +VL T EG+++ WG N+
Sbjct: 76 GCLGLGDVQSTIE------PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 129
Query: 70 ELGRGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G G P + NL + ++I++A G YHSL LT DG+VF+WGY GQ+G T
Sbjct: 130 QLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST 189
Query: 129 QNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
NQ +P + L ++ V +IACG S AV + G++Y+WG + QLG+ G QP P
Sbjct: 190 ANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGL-GSSGNQPTP 248
Query: 188 VE 189
Sbjct: 249 CR 250
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG +M + + G
Sbjct: 172 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L + + ++A G H+L LTD+G+V++WG
Sbjct: 225 EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P I D + AC + TSAA T+ G +YMWG + + +
Sbjct: 285 SYGQLGTGNKSNQSYPTPISVEKDRIIEIAACHSTHTSAAKTQGGNVYMWGQCRGQSVTL 344
Query: 178 PGL 180
P L
Sbjct: 345 PHL 347
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 104/193 (53%), Gaps = 9/193 (4%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY G EG GRLGLG E + S+ + AV GG + LT++G+
Sbjct: 2975 KLYACG--EGTNGRLGLGDNNNVGEPKPIPFLSQ---YIIKKVAVHSGGKHALALTQDGK 3029
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG + +LG G+RV KP+L+ L RI IA G HS A+ +G++++WG G
Sbjct: 3030 VFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGE 3089
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLGV 177
+G+LGH T P +++AL + V +ACG + + A+TE G +Y WG+ +LG
Sbjct: 3090 YGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGR 3149
Query: 178 PGLP-VVQPCPVE 189
G P PV+
Sbjct: 3150 GGSDGCYSPLPVD 3162
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTM-VLTEEGQL 60
+Y WG ++ + +LG G + SK+K P+ +A GG T+ V+++EG+L
Sbjct: 2924 VYVWGLNDKD-QLGGLKGSKIKLPVHSEVLSKLK--PIHIA----GGSKTLFVVSQEGKL 2976
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ G +N LG GD +PK +P L I ++A +GG H+LALT DGKVFSWG G
Sbjct: 2977 YACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEG 3036
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LGH + P +IEAL + + IACG SAA+ G+LY WG + +LG
Sbjct: 3037 EDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLG 3094
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLG G G + ++ ++ + + AV+ GG + L+ EG +++WG + +L
Sbjct: 3957 GRLGTG---GVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4013
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G G+R+ +PKL+ L+ I+ IA GG+HS A++ G +++WG G +G+LGH + +Q
Sbjct: 4014 GHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQ 4073
Query: 132 KVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
P V+ AL V +ACG + + VT+ ++ WG+ +LG
Sbjct: 4074 LKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLG 4120
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P V AL V V+CG TM LTE+
Sbjct: 3081 ELYTWGLGE-YGRLGHG------DTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTED 3133
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G + P + L + ++Q+ G SLALT G+V++WG
Sbjct: 3134 GSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGK 3193
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3194 GDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3252
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 94/178 (52%), Gaps = 10/178 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
EL TWGR GRLG G +SIP+ V AL V V+CG T+ +T
Sbjct: 573 ELLTWGRG-SYGRLGHGI------CDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNS 625
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G PK++ L+D ++++ GG S ALT G+V++WG
Sbjct: 626 GIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGK 685
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G H +LGH ++ + P ++E L ++ V ++ G A+TE +Y WG Q+
Sbjct: 686 GDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQI 743
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG G + G P V L + V V CG F++ LT+ G++
Sbjct: 3136 VYSWG-DGDFGKLGRGG------SDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEV 3188
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G+ +P L+ L +++ +A G H LA+TD G+V++WG H
Sbjct: 3189 WTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDH 3248
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P ++ L D V +ACG S S A
Sbjct: 3249 GQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSHSIA 3285
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT G +
Sbjct: 4108 VWSWG-DGDYGKLGRGG------SDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAV 4160
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L +I+ IA G H +A +D G+V++WG
Sbjct: 4161 YTWGKGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDE 4220
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T Q+ P ++ AL + +T +ACG + + A
Sbjct: 4221 GQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLA 4257
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 8/177 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y+WG +G GRLG G +E + + S V ++CG ++ ++ G+L
Sbjct: 522 VYSWGNGDG-GRLGHGDSFSCDEPQVIEVLSDRT-----VTYIACGSTYSAAISSTGELL 575
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGG 119
WG S LG G P ++ L + +A +G +L +T+ G VFSWG G
Sbjct: 576 TWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGD 635
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K+P +++ L D+ V + CGG SAA+T G++Y WG +LG
Sbjct: 636 YGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLG 692
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
LYTWG+ GR G LG G ++ P+ V AL V V+CG T+ +T++
Sbjct: 4054 LYTWGK----GRYGRLGHGDSDDQLK----PTVVTALQGYKVIDVACGSGDAQTLCVTDD 4105
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4106 DNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGK 4165
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P + AL + + IA G A ++KG++Y WG+ + QLG
Sbjct: 4166 GDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLG 4224
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 48 GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G + LT +G +++WG LG GD +P+++ L D + IA G +S A++
Sbjct: 510 GKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAIS 569
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLY 165
G++ +WG G +G+LGH + +P V+ AL VTH+ACG S + VT G ++
Sbjct: 570 STGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVF 629
Query: 166 MWGNAKDSQLG 176
WG+ +LG
Sbjct: 630 SWGDGDYGKLG 640
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 93 IIQIAN--GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
++QIA+ G H LALT G V+SWG G G+LGH + + P VIE L+D VT+IAC
Sbjct: 501 VVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIAC 560
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + SAA++ G+L WG +LG
Sbjct: 561 GSTYSAAISSTGELLTWGRGSYGRLG 586
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G +P V K L V V CGG F+ LT G++
Sbjct: 628 VFSWG-DGDYGKLGRGGSDGSK------LPKIVDKLLDQNVVKVFCGGQFSAALTAHGEV 680
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG +Y LG G+ PKL+ L + ++ ++ G H LA+T+D V+ WG
Sbjct: 681 YTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDA 740
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q+ S P + L+ + V + CG S A
Sbjct: 741 CQIDPSLGAVVSEPTLCPTLSGKSVIGLVCGPMQSFA 777
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKL-LP--NLVDVRIIQIANGGYHSLALTDDGKVFS 114
G ++ WG N +LG + G K KL LP +L +R IQ+A G A+T DGKV++
Sbjct: 3894 GAIYGWGHNHRGQLGG---LEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVYA 3950
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKD 172
GYG G+LG + VP ++E++ F+ +A GG A++ +G +Y WG D
Sbjct: 3951 TGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4010
Query: 173 SQLG 176
+LG
Sbjct: 4011 GKLG 4014
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
D ++Q + + + V+ WG QLG K+P+ E L+ HIA
Sbjct: 2902 DWEVVQEQMTAQRASDVQQNAAVYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIA 2961
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G T V+++GKLY G + +LG+
Sbjct: 2962 GGSKTLFVVSQEGKLYACGEGTNGRLGL 2989
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G ++ WG+ GQLG K+P+ E+L+ +A G T AVT GK+Y G
Sbjct: 3894 GAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVYATGY 3953
Query: 170 AKDSQLGVPGLPVV 183
+LG G+ V
Sbjct: 3954 GALGRLGTGGVDSV 3967
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 107/183 (58%), Gaps = 9/183 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L++ G ++ G+LG PN+ P + +L V VSCG ++ LT GQ
Sbjct: 56 KLFSCGNND-HGQLGHDTDCLPNKR-----PQFISSLENYIVTHVSCGTTHSLALTNWGQ 109
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG+NS +LG + + P+++ + ++QIA+G +HSLALT+ G++FSWG
Sbjct: 110 VFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGAN 169
Query: 119 GHGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G+GQLG T + V P ++++LA + IACGG+ S AV++ G ++ WG QLG+
Sbjct: 170 GYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL 229
Query: 178 PGL 180
L
Sbjct: 230 NDL 232
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 92/167 (55%), Gaps = 8/167 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL++WG + G G+LGLG + P+ VK+L +P+A ++CGG + +++ G
Sbjct: 162 ELFSWGAN-GYGQLGLG-----TTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGA 215
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D V P+ L L ++ + I+ G S LT +G VF+ G G
Sbjct: 216 IFGWGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGT 275
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLY 165
GQLGH N+ +P ++ L +T IACG T A V +GK+Y
Sbjct: 276 FGQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 10/193 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALPVPVAAVSCGGFFTMVLTEEGQL 60
+Y WG + G LGLG E + +P ++ V +CG T++LT++G+L
Sbjct: 3 VYCWG-NTVHGELGLGGI----EDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKL 57
Query: 61 WNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G N + +LG D + +P+ + +L + + ++ G HSLALT+ G+VFSWG
Sbjct: 58 FSCGNNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNS 117
Query: 120 HGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV- 177
GQLGH + Q P +I+ +A + V IA G S A+T G+L+ WG QLG+
Sbjct: 118 IGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLG 177
Query: 178 -PGLPVVQPCPVE 189
G VV P V+
Sbjct: 178 TTGEKVVTPTLVK 190
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL N+ P ++K L + V +SCG F+ LT+EG +
Sbjct: 216 IFGWGKNTF-GQLGL------NDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGV 268
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+++ L+ +I QIA G H+LA GK++ +G GG
Sbjct: 269 FTCGAGTFGQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGG 328
Query: 120 HGQLGHSFTQNQKVPMVIE 138
GQLG N P ++
Sbjct: 329 VGQLGVGVISNYNTPQIVR 347
>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
Length = 1909
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 19 GRGPNEAGGLSIPSKVKALPVP----------VAAVSCGGFFTMVLTEEGQLWNWGANSN 68
G N G + SK ++ P P + ++S G +++ LTE G ++ WG S
Sbjct: 604 GSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMWGRGSV 663
Query: 69 YE-----LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL 123
LG P L +L D+ ++ I G YHS A+ +G++ +WG G GQL
Sbjct: 664 KNPPVPVLGIPQIEDQLLPIKLESLTDIVVVSI--GFYHSAAVRANGELLTWGVGEEGQL 721
Query: 124 GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GH TQNQ P VI++L ++T + CG + +T+ GK+Y WG+++ QLG+
Sbjct: 722 GHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGL 775
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WGR G + P G + +P K+++L + VS G + + + G+L
Sbjct: 654 DVYMWGR--GSVKNPPVPVLGIPQIEDQLLPIKLESL-TDIVVVSIGFYHSAAVRANGEL 710
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG +LG GD +PK++ +L I Q+ G H++ LT +GKV++WG +
Sbjct: 711 LTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEY 770
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN-AKDSQLGVPG 179
GQLG T PM + AL V IA G + A +T ++ ++GN A +
Sbjct: 771 GQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNGAAMGAASIIS 830
Query: 180 LPVVQP 185
+P + P
Sbjct: 831 IPTLVP 836
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 58/225 (25%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
EL TWG E EG+LG G + E P +++L + V CG T+ LT+ G+
Sbjct: 709 ELLTWGVGE-EGQLGHGDTQNQVE------PKVIQSLTSFWITQVQCGEKHTICLTKNGK 761
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD---------- 109
++ WG++ +LG GD KP + L ++QIA+G H LT+
Sbjct: 762 VYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNGA 821
Query: 110 --------------------------------------GKVFSWGYGGHGQLGHSFTQNQ 131
G V++WG G +LGH Q +
Sbjct: 822 AMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTGQ--ELGHGNNQTE 879
Query: 132 KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
P ++EAL ++ + I+CGG +A +T+ G+++ G QLG
Sbjct: 880 STPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLG 924
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 49/146 (33%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
Query: 14 LGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
L G G A +SIP+ V +L + + + CG + T ++E G ++ WG + ELG
Sbjct: 815 LVFGNGAAMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWG--TGQELG 872
Query: 73 RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
G+ PKL+ L + I QI+ GG H+ LTD G++F+ G GQLGH +Q
Sbjct: 873 HGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLGHQ-AGDQN 931
Query: 133 VPMVIEALADEFVTHIACGGSTSAAV 158
P IE+L ++CG + + A+
Sbjct: 932 KPKKIESLTKTTFISVSCGENYNIAL 957
Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 112 VFSWGYGGHGQLGH---SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW- 167
+ +WG + +LG S Q+Q P + + I+ G SAA+TE G +YMW
Sbjct: 600 LMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMWG 659
Query: 168 -GNAKDSQLGVPGLPVVQ 184
G+ K+ + V G+P ++
Sbjct: 660 RGSVKNPPVPVLGIPQIE 677
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++IIQ+A G YHSLAL+ +VF WG +GQLG + + Q P +I++L
Sbjct: 135 SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 96/178 (53%), Gaps = 7/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++YTWG + G+LGL NE +S S + P+ V+ G +VLT G L
Sbjct: 168 QIYTWGSN-NHGQLGLANKTPQNEPQWVSCISGL-----PIVRVAAGADHNLVLTISGAL 221
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG NS +LG GD P L+ L + I +A G HSLALT DG VF++G G +
Sbjct: 222 FAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMY 281
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA-VTEKGKLYMWGNAKDSQLGV 177
GQLGH+ + N+ +P + L VT IACG S A V G++Y++G + QLG
Sbjct: 282 GQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGT 339
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 100/177 (56%), Gaps = 6/177 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++TWG +E + +LG RG ++ SIP V+ L V V+CG T+ LT GQ
Sbjct: 114 QVFTWGSNE-DNQLG----RGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQ 168
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG+N++ +LG ++ +P+ + + + I+++A G H+L LT G +F+WG
Sbjct: 169 IYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNS 228
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG Q++ P +++ L ++ + +ACG S A+T G ++ +G QLG
Sbjct: 229 FGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLG 285
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIAN 98
V S G + VLT+ GQ++ WG+N + +LGRG D P+++ L D +++Q+A
Sbjct: 96 VLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVAC 155
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H++ LT G++++WG HGQLG + Q P + ++ + +A G + +
Sbjct: 156 GSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVL 215
Query: 159 TEKGKLYMWGNAKDSQLGV 177
T G L+ WG QLGV
Sbjct: 216 TISGALFAWGCNSFGQLGV 234
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 9/170 (5%)
Query: 11 EGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNY 69
G+LGLG E +++P ++++ V V ++CG T+ + ++G++ + G N
Sbjct: 19 HGQLGLGGL----EEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDYG 74
Query: 70 ELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSF 127
+LG +P L+ +L + ++Q ++G HS LTD G+VF+WG QL G
Sbjct: 75 QLGHEKPCK--RPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVD 132
Query: 128 TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ + +P ++ LAD V +ACG + + +T G++Y WG+ QLG+
Sbjct: 133 SASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGL 182
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
V WG HGQLG + + V P I + + V HIACG + V + G++
Sbjct: 9 SSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSC 68
Query: 168 GNAKDSQLG 176
GN QLG
Sbjct: 69 GNNDYGQLG 77
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
harrisii]
Length = 552
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 93/163 (57%), Gaps = 5/163 (3%)
Query: 31 PSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP-N 87
P +V L +A +S G G ++ T+EG+++ WG N+ +LG G G P + N
Sbjct: 90 PRRVDHLCGKKIACLSYGSGPHVVIATDEGEVYTWGHNAYNQLGNGTTNHGLVPTHISTN 149
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVT 146
L + ++I++A G +HSL LT DG+VF+WGY GQ+G T NQ +P V L ++ T
Sbjct: 150 LGNRKVIEVACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRKVTGCLQNKIAT 209
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
IACG S AV E G++Y+WG + QLG+ G QP P
Sbjct: 210 TIACGQMCSMAVVESGEVYVWGYNGNGQLGL-GSSGNQPTPCR 251
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALPVPVAA-VSCGGFFTMVLTEEG 58
E++ WG + G++G G IP KV L +A ++CG +M + E G
Sbjct: 173 EVFAWGYNNS-GQVGSGS------TANQPIPRKVTGCLQNKIATTIACGQMCSMAVVESG 225
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ +I G H+L LTD+G +++WG
Sbjct: 226 EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWGAN 285
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 286 SYGQLGTGNKSNQSYPTPVSVEKDRVIEIAACHSAHTSAAKTQSGHIYMWGQCRGQSVTL 345
Query: 178 PGL 180
P L
Sbjct: 346 PHL 348
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++IIQ+A G YHSLAL+ +VF WG +GQLG + + Q P +I++L
Sbjct: 135 SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++IIQ+A G YHSLAL+ +VF WG +GQLG + + Q P +I++L
Sbjct: 135 SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++IIQ+A G YHSLAL+ +VF WG +GQLG + + Q P +I++L
Sbjct: 135 SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++IIQ+A G YHSLAL+ +VF WG +GQLG + + Q P +I++L
Sbjct: 135 SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFSWGQNK-YGQLGLGI-----DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q++ G YHSLAL+ +VFSWG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + ++CG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
griseus]
gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
Length = 551
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LG+G + E P ++ +L +A++S G +V
Sbjct: 59 LYTTVDDEIFVLGTNCSGCLGIGDIQSTIE------PRRLNSLTGKKIASLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T +G+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V +IACG S AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 233 GNGQLGL-GSSGNQPTPCR 250
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG +M + + G
Sbjct: 172 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 225 EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 285 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVL 344
Query: 178 PGL 180
P L
Sbjct: 345 PHL 347
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 94/170 (55%), Gaps = 11/170 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG + + IP +V L V AV GG M LT +G++++WG +
Sbjct: 2269 GRLGLGSSQN------VDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 2322
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+LL L RI IA G HS A+T G++++WG G +G+LGH +
Sbjct: 2323 GKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGDS 2382
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++AL + V +ACG + + +T++G +Y WG+ +LG
Sbjct: 2383 TTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLG 2432
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG RG +E G S+P V+ L V + CG F++ LT+ GQ+
Sbjct: 2420 VYSWG-DGDFGKLG----RGGSE--GCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQV 2472
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G KP++ L +II +A G H LA+TD G+VF+WG H
Sbjct: 2473 WTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDH 2532
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P +++ L +T +ACG S S A
Sbjct: 2533 GQQGDGSTTVNKKPALVQGLEGVRITRVACGSSHSTA 2569
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P KV AL + V V CG F++ LT+ G +
Sbjct: 3395 VWSWG-DGDYGKLGRGG------SDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCV 3447
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L +II IA G H +A +D G+V++WG
Sbjct: 3448 YTWGKGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDE 3507
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL D+ +T++ACG + + A
Sbjct: 3508 GQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHTVA 3544
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 95/169 (56%), Gaps = 5/169 (2%)
Query: 10 GEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNY 69
GRLG+G G + ++ ++ + + AV+ GG + L+ EG++++WG +
Sbjct: 3242 ASGRLGIG---GTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDG 3298
Query: 70 ELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ 129
+LG G+R +P+++ +L +I IA GG HS +T G++++WG G +G+LGH ++
Sbjct: 3299 KLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSE 3358
Query: 130 NQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+Q P + +AL V +ACG S + +++ ++ WG+ +LG
Sbjct: 3359 DQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLG 3407
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELYTWG E GRLG G ++ P VKAL V V+CG T+ LT+E
Sbjct: 2365 ELYTWGLGE-YGRLGHG------DSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDE 2417
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L +IQI G SLALT G+V++WG
Sbjct: 2418 GMVYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGK 2477
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V E L + + H+A G AVT+ G+++ WG+ Q G
Sbjct: 2478 GDYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQG 2536
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
ELYTWG+ GRLG G P A L K V A G T+ ++++
Sbjct: 3340 ELYTWGKGR-YGRLGHGDSEDQLRPKMADAL------KGYRVIDVACGSGDSQTLCISDD 3392
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P+ + L + + ++ G S+ALT G V++WG
Sbjct: 3393 DNVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGK 3452
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P + AL + + IA G A +++G++Y WG+ + QLG
Sbjct: 3453 GDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLG 3511
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P + +L +R IQI G A+T DGK+++ GY
Sbjct: 3181 GTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGY 3240
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T + P ++E++ + +A GG + A++ +G++Y WG +D +L
Sbjct: 3241 GASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKL 3300
Query: 176 G 176
G
Sbjct: 3301 G 3301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 57 EGQLWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
+ +++ WG N +LG RG ++ P L L ++++ A G +T +GKV++
Sbjct: 2205 QTKVFVWGLNDKDQLGGPRGSKIK--TPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYA 2262
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKD 172
G G +G+LG +QN +P + L+ V +A GG + A+T GK++ WG D
Sbjct: 2263 CGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 2322
Query: 173 SQLG 176
+LG
Sbjct: 2323 GKLG 2326
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 82 PKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA 139
PKL+ L + + + IA G +LA+TD G +FS+G G +G+LG + K+P +++
Sbjct: 8 PKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKLVDK 67
Query: 140 LADEFVTHIACGGSTSAAVTEKGKLY 165
L + CG S +T+ G +Y
Sbjct: 68 LQGQHAVIACCGNQFSVILTKTGTVY 93
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 34/74 (45%)
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G ++ WG+ GQLG KVP IE+L I G T AVT GKLY G
Sbjct: 3181 GTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGY 3240
Query: 170 AKDSQLGVPGLPVV 183
+LG+ G V
Sbjct: 3241 GASGRLGIGGTDSV 3254
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
KVF WG QLG K P++ E L+ V A G + VT +GK+Y G
Sbjct: 2207 KVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYACGEG 2266
Query: 171 KDSQLGV 177
+ +LG+
Sbjct: 2267 TNGRLGL 2273
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 94/170 (55%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG M LT +G++++WG +
Sbjct: 1831 GRLGLGLS-----SGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 1885
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS A+T G+++SWG G +G+LGH
Sbjct: 1886 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 1945
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 1946 TTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLG 1995
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 1983 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2035
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+T+ G+VF+WG H
Sbjct: 2036 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDH 2095
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P +++ L + +T +ACG S S A
Sbjct: 2096 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 1769 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGK 1821
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L + V+ + + +GG H++ALT DGKVFSWG
Sbjct: 1822 VYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 1881
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 1882 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLG 1941
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
AV+ GG + L+ EG+L++WG + +LG G+R +P+++ +L V ++ IA GG H
Sbjct: 2854 AVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAH 2913
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S +T G++++WG G +G+LGH +++Q P ++EAL V +ACG + + +T+
Sbjct: 2914 SACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTD 2973
Query: 161 KGKLYMWGNAKDSQLG 176
++ WG+ +LG
Sbjct: 2974 DDMVWSWGDGDYGKLG 2989
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
ELYTWG+ GR G LG G ++ P V+AL V V+CG T+ LT+
Sbjct: 2922 ELYTWGK----GRYGRLGHGDSEDQLK----PKLVEALQGHRVIDVACGSGDAQTLCLTD 2973
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 2974 DDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 3033
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 3034 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 3093
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELY+WG E GRLG G P VK L V V+CG T+ LT+E
Sbjct: 1928 ELYSWGLGE-YGRLGHGDNTTQLR------PKLVKVLLGHRVVQVACGSRDAQTLALTDE 1980
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 1981 GMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2040
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + + H+A G AVTE G+++ WG+ Q G
Sbjct: 2041 GDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQG 2099
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 2977 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3029
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 3030 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 3089
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + + +ACG + + A
Sbjct: 3090 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 3126
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 2763 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 2822
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G+LY WG A+D +L
Sbjct: 2823 GAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKL 2882
Query: 176 G 176
G
Sbjct: 2883 G 2883
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
A T KVF WG QLG KVP E L+ V +A G + AVT +GK+
Sbjct: 1763 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKV 1822
Query: 165 YMWGNAKDSQLGV 177
Y G A + +LG+
Sbjct: 1823 YACGEATNGRLGL 1835
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 106/199 (53%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A++S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIASLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P ++ NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 233 GNGQLGL-GSSGNQPTPCR 250
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G N+ IP +V V ++CG M + + G
Sbjct: 172 EVFAWGYNN-SGQVG--SGSTVNQP----IPRRVTGCLQNKVVVTIACGQMCCMAVVDTG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 225 EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + + +
Sbjct: 285 SYGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 344
Query: 178 PGL 180
P L
Sbjct: 345 PHL 347
>gi|160774403|gb|AAI55388.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
Length = 530
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 79/128 (61%), Gaps = 2/128 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDG 110
+V E+G++++WG N +LG G+ + G P ++ L+ +++Q+A G +HS+ALT DG
Sbjct: 88 LVCNEDGEVYSWGHNGYSQLGNGNAIQGVAPVQVCMELLAKKVVQVACGSHHSMALTSDG 147
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF WGY GQ+G T NQ VP + A L + V IA G S+S AVT+ G +Y WG
Sbjct: 148 EVFCWGYNNCGQVGSGTTANQSVPRRVSATLQSKVVVSIAAGQSSSMAVTDNGHVYCWGY 207
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 208 NGTGQLGI 215
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 9/191 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS-IPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + G +LG G N G++ + ++ L V V+CG +M LT +G+
Sbjct: 95 EVYSWGHN-GYSQLGNG-----NAIQGVAPVQVCMELLAKKVVQVACGSHHSMALTSDGE 148
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-IIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG N+ ++G G P+ + + + ++ IA G S+A+TD+G V+ WGY
Sbjct: 149 VFCWGYNNCGQVGSGTTANQSVPRRVSATLQSKVVVSIAAGQSSSMAVTDNGHVYCWGYN 208
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
G GQLG T NQ +P + + + G + + A++++G LY WG QLG+
Sbjct: 209 GTGQLGIGNTGNQLMPCRLVFAHPVCIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGI- 267
Query: 179 GLPVVQPCPVE 189
G Q PV+
Sbjct: 268 GNKSNQTAPVK 278
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 11/183 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G S+P +V A V +++ G +M +T+ G
Sbjct: 148 EVFCWGYNNC-GQVGSGT------TANQSVPRRVSATLQSKVVVSIAAGQSSSMAVTDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG N +LG G+ P L V IIQ+ G H+LAL+D G +++WG
Sbjct: 201 HVYCWGYNGTGQLGIGNTGNQLMPCRLVFAHPVCIIQVVLGYAHTLALSDQGVLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST-SAAVTEKGKLYMWGNAKDSQLGV 177
HGQLG NQ P+ + + V AC + SAA ++ G++YMWG + L
Sbjct: 261 SHGQLGIGNKSNQTAPVKV-GTNERMVEVTACHSTNISAAKSQSGQVYMWGLCRGQSLLS 319
Query: 178 PGL 180
P L
Sbjct: 320 PHL 322
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDGKVF 113
T+ +++ +G NS+ LG GD P+ L L RI+ ++ G G H L +DG+V+
Sbjct: 38 TQNNEVFVFGMNSSNCLGTGDNQSTIIPRRLDVLCGKRIVDLSYGSGPHILVCNEDGEVY 97
Query: 114 SWGYGGHGQL--GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
SWG+ G+ QL G++ V + +E LA + V +ACG S A+T G+++ WG
Sbjct: 98 SWGHNGYSQLGNGNAIQGVAPVQVCMELLAKK-VVQVACGSHHSMALTSDGEVFCWGYNN 156
Query: 172 DSQLG 176
Q+G
Sbjct: 157 CGQVG 161
>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 954
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 69/191 (36%), Positives = 103/191 (53%), Gaps = 13/191 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG E +GRLG G R N +P K+ AL + VSCGG T V++++
Sbjct: 316 EVYSWGSGE-DGRLGHGEMRDRN------VPRKIMALLRHRIEYVSCGGSHTAVVSDQNL 368
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPN--LVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ +G N LG GD P+ +P RII++ G ++AL+ +G+VFSWG
Sbjct: 369 VFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCGWNFTIALSLEGRVFSWGK 428
Query: 118 GGHGQLGHSFT-QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ G F Q++ P +IE L D + +ACG + S A+T + ++ WG + QLG
Sbjct: 429 QSEGQCGLGFCDQDELSPCLIEKLLDNRIVDVACGYTHSLALTSQHEVLSWGLGEYGQLG 488
Query: 177 VPGLPVVQPCP 187
G+ V QP P
Sbjct: 489 -RGI-VYQPSP 497
Score = 86.3 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 52/169 (30%), Positives = 92/169 (54%), Gaps = 13/169 (7%)
Query: 19 GRGP--NEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD 75
GR P + L P KV LP +A ++CGG + L+ G ++ ++ ++ + +
Sbjct: 217 GRPPGWSHTNSLLTPQKVDVLPGQSIAEIACGGNHILYLSSAGDVY---SSEDHAISTTE 273
Query: 76 RVGGWK-PKLLPNLVDVR------IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+ P+L+ L + II IA G HS+ALT G+V+SWG G G+LGH
Sbjct: 274 PTNMLQTPQLVKELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEM 333
Query: 129 QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+++ VP I AL + +++CGGS +A V+++ ++ +G ++ +LG+
Sbjct: 334 RDRNVPRKIMALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGL 382
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 11/173 (6%)
Query: 28 LSIPSKVKALPV-------PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW 80
L P VK L + P+ ++CG ++ LT G++++WG+ + LG G+
Sbjct: 278 LQTPQLVKELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRN 337
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-- 138
P+ + L+ RI ++ GG H+ ++D VF++G G +G+LG T+ P +
Sbjct: 338 VPRKIMALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTW 397
Query: 139 ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ--LGVPGLPVVQPCPVE 189
+ + + CG + + A++ +G+++ WG + Q LG + PC +E
Sbjct: 398 GFRKQRIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLGFCDQDELSPCLIE 450
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 60/178 (33%), Positives = 81/178 (45%), Gaps = 22/178 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGR---GPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
++T+GR GRLGLG + P E + + V CG FT+ L+ EG
Sbjct: 369 VFTFGRGR-NGRLGLGDTKCHDTPQEVPTWGFRKQ------RIIKVVCGWNFTIALSLEG 421
Query: 59 QLWNWGANSNYELGRG----DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
++++WG S + G G D + P L+ L+D RI+ +A G HSLALT +V S
Sbjct: 422 RVFSWGKQSEGQCGLGFCDQDEL---SPCLIEKLLDNRIVDVACGYTHSLALTSQHEVLS 478
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIE----ALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
WG G +GQLG Q P I+ A I CG S LY WG
Sbjct: 479 WGLGEYGQLGRGIVY-QPSPESIDQSLFACEGGHPQRIYCGAFHSIITAGSKILYAWG 535
>gi|170581639|ref|XP_001895769.1| hypothetical protein [Brugia malayi]
gi|158597158|gb|EDP35375.1| conserved hypothetical protein [Brugia malayi]
Length = 916
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 30/211 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-----VPVAAVSCGGFFTMVLT 55
+LY +G G+G+LG P +++ + +P V P V V +++ G T+ L+
Sbjct: 5 QLYVFGC-AGDGQLGFRPDSVESDSQMMIVPRLVYGAPTGQNGVTVKSIASGERHTLFLS 63
Query: 56 EEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
++G++W+ G+N N ELGRG R G + + V IIQI+ G HS+A++DDG++F+
Sbjct: 64 DDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSMAVSDDGRLFA 123
Query: 115 WGYGGHGQLGHS-----FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
WG HGQL S ++VP + E + +ACG S + ++ G++++WG
Sbjct: 124 WGSNSHGQLAMSGDILASDTPKRVPSLPETV------QVACGASHTVSLNGGGRVFIWGQ 177
Query: 170 AKDSQLG--------VPGLPVVQ----PCPV 188
D ++ +P+VQ PC V
Sbjct: 178 QSDGRIRHSPAEVEIFISIPIVQNVVNPCAV 208
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 22/187 (11%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG + G+L + + P +V +LP V V+CG T+ L G+++
Sbjct: 121 LFAWGSNS-HGQLAMS-----GDILASDTPKRVPSLPETVQ-VACGASHTVSLNGGGRVF 173
Query: 62 NWGANSNYELGRGDR-----------VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
WG S+ + P +PN+ V + + G HS+ALT +G
Sbjct: 174 IWGQQSDGRIRHSPAEVEIFISIPIVQNVVNPCAVPNINSV--VAVECGDSHSIALTHEG 231
Query: 111 KVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VFS G GQLG ++Q I + VT IAC G V GK++ +G
Sbjct: 232 RVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIAC-GRCHTIVVANGKMHTFGL 290
Query: 170 AKDSQLG 176
+ QLG
Sbjct: 291 NSNGQLG 297
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 25/155 (16%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIP---SKVKALPVP----VAAVSCGGFFTMVL 54
++ WG+ + +GR+ P +SIP + V VP V AV CG ++ L
Sbjct: 172 VFIWGQ-QSDGRIRHSPAE---VEIFISIPIVQNVVNPCAVPNINSVVAVECGDSHSIAL 227
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN-------LVDVRIIQIANGGYHSLALT 107
T EG++++ G++S +LG G +P N ++ + +IA G H++ +
Sbjct: 228 THEGRVFSCGSDSFGQLGCG------QPNRSQNCMRGITEMLGSHVTRIACGRCHTIVVA 281
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD 142
+ GK+ ++G +GQLGH T+NQ P VI+++ +
Sbjct: 282 N-GKMHTFGLNSNGQLGHGNTRNQITPRVIDSVEN 315
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG R E P ++ +L +A +S G +V
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGDVRSTIE------PRRLDSLNGKKIACLSYGSGPHIV 88
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 148
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P + L ++ V IACG AV + G++Y+WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 208
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 209 GNGQLGL 215
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 148 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 199
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 200 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 259
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 260 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 319
Query: 177 VPGL 180
+P L
Sbjct: 320 LPHL 323
>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
Length = 963
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ +G+LG+G S P V+ L VP+ +S G +M L+ G
Sbjct: 172 ELFAWGQN-LDGQLGVG-----RIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGN 225
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P + L D ++ +A GG H+ LT G VF++G G
Sbjct: 226 VYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGK 285
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ K+ QLG
Sbjct: 286 YGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLG 343
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 84/137 (61%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N + +LG G P+++ NL V ++QI+ G
Sbjct: 154 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAG 213
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ G V+SWG GQLG T N++ P IEAL D+ V +ACGG +A +T
Sbjct: 214 EAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLT 273
Query: 160 EKGKLYMWGNAKDSQLG 176
+ G ++ +G+ K QLG
Sbjct: 274 KSGLVFTFGDGKYGQLG 290
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 9/135 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WGR++ G+LGLG PS ++AL V ++CGG T +LT+ G +
Sbjct: 226 VYSWGRNDC-GQLGLGHTYNKES------PSCIEALDDQKVEFLACGGCHTALLTKSGLV 278
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA-LTDDGKVFSWGYGG 119
+ +G +LG +P+L+ LV R+ QIA G H+LA ++D GKVFS+G G
Sbjct: 279 FTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGK 338
Query: 120 HGQLGHSFTQNQKVP 134
GQLG+ T+NQ +P
Sbjct: 339 EGQLGNGGTRNQLIP 353
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVT 146
L + IIQI G YHSLAL+ G++F+WG GQLG + P ++E L+ +
Sbjct: 149 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLV 208
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
I+ G + S A++ G +Y WG QLG+
Sbjct: 209 QISAGEAHSMALSMSGNVYSWGRNDCGQLGL 239
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
G KPK + ++I + G H L L+ DGK F + Y + H+ Q
Sbjct: 99 GARKPKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYS----IEHARFQC------- 147
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L ++ + I CG S A+++ G+L+ WG D QLGV
Sbjct: 148 -ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGV 186
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LG+G + E P ++ +L +A++S G +V
Sbjct: 68 LYTTVNDEIFVLGTNCSGCLGVGDIQSTIE------PRRLDSLTGKKIASLSYGSGPHIV 121
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T +G+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 122 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 181
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V +IACG S AV + G++Y+WG
Sbjct: 182 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 241
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 242 GNGQLGL-GSSGNQPTPCR 259
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG +M + + G
Sbjct: 181 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTG 233
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G++++WG
Sbjct: 234 EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGAN 293
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 294 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 353
Query: 178 P 178
P
Sbjct: 354 P 354
>gi|380018674|ref|XP_003693250.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
florea]
Length = 534
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 85/140 (60%), Gaps = 3/140 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL-PNLVDVRIIQIANGGYHSLALTDDG 110
+ LTE+G++++WG NS+ ELG G P L+ NL + II IA G +HSLALT +G
Sbjct: 89 LALTEDGKIYSWGHNSHCELGNISASQGLIPMLVTKNLCNEFIIDIACGSHHSLALTIEG 148
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+V++WG Q+G+S N+ PM + + LAD+ V I+CG S+S VT+ G++Y WG
Sbjct: 149 RVYAWGENTSRQVGNSVNINEGTPMKVNSTLADKRVVCISCGQSSSMVVTDNGEIYSWGC 208
Query: 170 AKDSQLGVPGLP-VVQPCPV 188
+ QLG+ PC +
Sbjct: 209 NEVGQLGIGNYANHANPCKI 228
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+++T++ ++ G+N++ LG GD P+ + L I A G G H LALT+DG
Sbjct: 36 LIVTKDKMVYAVGSNTSGCLGTGDTYNTLYPRRVEELCGKDIKTFAYGKGPHVLALTEDG 95
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVI-EALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
K++SWG+ H +LG+ +PM++ + L +EF+ IACG S A+T +G++Y WG
Sbjct: 96 KIYSWGHNSHCELGNISASQGLIPMLVTKNLCNEFIIDIACGSHHSLALTIEGRVYAWGE 155
Query: 170 AKDSQLG 176
Q+G
Sbjct: 156 NTSRQVG 162
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANG 99
+ ++CG ++ LT EG+++ WG N++ ++G + P K+ L D R++ I+ G
Sbjct: 131 IIDIACGSHHSLALTIEGRVYAWGENTSRQVGNSVNINEGTPMKVNSTLADKRVVCISCG 190
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
S+ +TD+G+++SWG GQLG N P I L + + CG + A++
Sbjct: 191 QSSSMVVTDNGEIYSWGCNEVGQLGIGNYANHANPCKITTLIGITIEKVVCGYAHVLALS 250
Query: 160 EKGKLYMWGNAKDSQLGV 177
G LY+WG QLG+
Sbjct: 251 NTGILYVWGGNYCGQLGL 268
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 7/183 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+Y WG + +G NE + + S + V +SCG +MV+T+ G++
Sbjct: 149 RVYAWGENTSRQ---VGNSVNINEGTPMKVNSTLA--DKRVVCISCGQSSSMVVTDNGEI 203
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG N +LG G+ P + L+ + I ++ G H LAL++ G ++ WG
Sbjct: 204 YSWGCNEVGQLGIGNYANHANPCKITTLIGITIEKVVCGYAHVLALSNTGILYVWGGNYC 263
Query: 121 GQLGHSFTQN--QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLG N V ++++ + + S A+ E +++MWG + +P
Sbjct: 264 GQLGLGMKTNICNPVQLIVQEMGRVLDIAASHYSHISIAMGENNQIFMWGECLGQSITIP 323
Query: 179 GLP 181
L
Sbjct: 324 TLT 326
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 105/199 (52%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLTGKKIACLSYGSGPHIV 88
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGE 148
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P + L ++ V +IACG S AV G++++WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYN 208
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 209 GNGQLGL-GSSGNQPTPCR 226
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG +M + G
Sbjct: 148 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 201 EVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 261 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
>gi|340721975|ref|XP_003399388.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like isoform 1
[Bombus terrestris]
Length = 534
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 96/172 (55%), Gaps = 4/172 (2%)
Query: 21 GPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVG 78
G +A P KV+AL + + G G + LTEEG++++WG NS+ ELG
Sbjct: 57 GTGDACNTFYPKKVEALCGKNIKTFAYGKGPHVLALTEEGKVYSWGHNSHGELGNCSTNH 116
Query: 79 GWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE 138
+ NL D I+ IA G +HSLALT++GKV++WG GQ+G S N+ PM +
Sbjct: 117 MIPMPVTKNLNDEFIVDIACGSHHSLALTNEGKVYAWGENTCGQVGKSVNINENTPMKVN 176
Query: 139 A-LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG-LPVVQPCPV 188
+ LA + V I+CG S+S VT+ GK+Y WG QLG+ + V PC V
Sbjct: 177 STLAGKTVICISCGQSSSMTVTDTGKVYGWGCNDVGQLGIGNYVNQVDPCEV 228
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+++T + ++ G+N++ LG GD + PK + L I A G G H LALT++G
Sbjct: 37 LIITRDKIVYALGSNTSGCLGTGDACNTFYPKKVEALCGKNIKTFAYGKGPHVLALTEEG 96
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
KV+SWG+ HG+LG+ T N +PM V + L DEF+ IACG S A+T +GK+Y WG
Sbjct: 97 KVYSWGHNSHGELGNCST-NHMIPMPVTKNLNDEFIVDIACGSHHSLALTNEGKVYAWGE 155
Query: 170 AKDSQLG 176
Q+G
Sbjct: 156 NTCGQVG 162
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 11/185 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV--PVAAVSCGGFFTMVLTEEG 58
++Y WG + G++G N P KV + V +SCG +M +T+ G
Sbjct: 149 KVYAWGENTC-GQVGKSVNINENT------PMKVNSTLAGKTVICISCGQSSSMTVTDTG 201
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N +LG G+ V P + LVDV I +I G H LAL++ G ++ WG
Sbjct: 202 KVYGWGCNDVGQLGIGNYVNQVDPCEVTMLVDVVIKKIVCGYAHVLALSNKGALYVWGGN 261
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACG--GSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG N P+ ++ V +A S A+ E +++MWG +
Sbjct: 262 NYGQLGLGMKMNMCNPVQLKQEMMGRVLDVATSHYNHISIAMAEGNRIFMWGECMGQSIT 321
Query: 177 VPGLP 181
P L
Sbjct: 322 FPVLT 326
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LG+G + E P ++ +L +A++S G +V
Sbjct: 35 LYTTVNDEIFVLGTNCSGCLGVGDIQSTIE------PRRLDSLTGKKIASLSYGSGPHIV 88
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T +G+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 89 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 148
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V +IACG S AV + G++Y+WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 208
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 209 GNGQLGL-GSSGNQPTPCR 226
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG +M + + G
Sbjct: 148 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G++++WG
Sbjct: 201 EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 261 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 P 178
P
Sbjct: 321 P 321
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LG+G + E P ++ +L +A++S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGVGDIQSTIE------PRRLDSLTGKKIASLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T +G+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V +IACG S AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 233 GNGQLGL-GSSGNQPTPCR 250
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG +M + + G
Sbjct: 172 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G++++WG
Sbjct: 225 EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 285 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 344
Query: 178 P 178
P
Sbjct: 345 P 345
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G HSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 14/182 (7%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTE 56
+LY G EG GRLGLG + P +V L V AV GG M LT
Sbjct: 3081 KLYACG--EGTNGRLGLG------HNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTL 3132
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+G++++WG + +LG G+R+ KPKL+ L RI IA G HS A+T G++++WG
Sbjct: 3133 DGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWG 3192
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQ 174
G +G+LGH Q P ++ AL D V +ACG + + +TE G ++ WG+ +
Sbjct: 3193 LGEYGRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGK 3252
Query: 175 LG 176
LG
Sbjct: 3253 LG 3254
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 88/169 (52%), Gaps = 14/169 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG RG +E G SIP +V L V V + CG F++ LT+ G++
Sbjct: 3242 VFSWG-DGDFGKLG----RGGSE--GCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEV 3294
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP + L ++I +A G H LA+TD G+V++WG H
Sbjct: 3295 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDH 3354
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA------VTEKGK 163
GQ G T K P ++ L FV +ACG S S A TEK K
Sbjct: 3355 GQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVAWSLPQNQTEKDK 3403
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++ WG ++ E +LG G S+ S++K P+ +A S F +++++G+L
Sbjct: 3029 KVLVWGLNDKE-QLGGLKGSKVKLPTYSSVLSQLK--PIHIAGGSKSLF---IVSQDGKL 3082
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ G +N LG G PK +P L V+ + + +GG H++ALT DGKVFSWG G
Sbjct: 3083 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3142
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LGH + P +IE L + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3143 EDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG 3200
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + L P V AL V V+CG T+ LTE+
Sbjct: 3187 ELYTWGLGE-YGRLGHG-----DNCTQLK-PKLVTALQDHRVVQVACGSRDAQTLCLTED 3239
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L V ++QI G SLALT G+V++WG
Sbjct: 3240 GLVFSWGDGDFGKLGRGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGK 3299
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I+ L + V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3300 GDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3358
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 4/150 (2%)
Query: 31 PSKVKALPVPVA--AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
P++VK L + A C G + L G +++WG+ LG GD P + L
Sbjct: 599 PAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAAL 658
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
D ++ + G +S A+T G++++WG G +G+LGH ++++ VP ++ AL V H+
Sbjct: 659 ADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHV 718
Query: 149 A--CGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A CG + S VTE G + WG+ +LG
Sbjct: 719 ALGCGDAHSLCVTEAGLAFAWGDGDFGKLG 748
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 88/155 (56%), Gaps = 5/155 (3%)
Query: 27 GLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
++ P+ V++L + AV+ GG + L+ +G++++WG + +LG G+R +PK
Sbjct: 4161 SVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPK 4220
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
L+ +L + ++ IA G HS +T G V +WG G +G+LGH +++Q P ++EAL
Sbjct: 4221 LIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGY 4280
Query: 144 FVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
IACG + + +T+ ++ WG+ +LG
Sbjct: 4281 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4315
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG +G GRLG G + +P+++ AL V V CG ++ +T G+
Sbjct: 629 DVYSWGSGDG-GRLGHG------DTSAKELPTRIAALADRQVTGVFCGSSYSAAITASGE 681
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGY 117
L+ WG + LG G+ + P L+ L R++ +A G HSL +T+ G F+WG
Sbjct: 682 LYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGD 741
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LG+ VP+ ++ V + G S A+T +G +Y WG +LG
Sbjct: 742 GDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLG 800
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT G +
Sbjct: 4303 VWSWG-DGDYGKLGRGG------SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSV 4355
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G+ +PK + L +II IA G H +A +D G+VF+WG
Sbjct: 4356 YTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDE 4415
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++++L + + + CG + + A++
Sbjct: 4416 GQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4454
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGR GRLG G + ++ + +KA V A+ CG ++ +TE G
Sbjct: 681 ELYTWGRGT-YGRLGHG---NSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLA 736
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG +LG VG P + ++++ +G S+ALT +G V++WG G
Sbjct: 737 FAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKGHG 796
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G+LGH +++ VP +++AL + + +A G + A+T G+LY WG Q+
Sbjct: 797 GRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQI 851
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+ TWG+ GRLG G + P V+AL ++CG T+ +T++
Sbjct: 4248 HVLTWGKGR-YGRLGHGDSEDQLQ------PKLVEALLGYRAIDIACGSGDAQTLCITDD 4300
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + + ++ G S+ALT G V++WG
Sbjct: 4301 DNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGK 4360
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH T + + P + AL + + IA G A ++ G+++ WG+ + QLG
Sbjct: 4361 GDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGD 4420
Query: 178 PGLPVVQ 184
+ +Q
Sbjct: 4421 GTVSAIQ 4427
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D P L +R IQIA G A+T DGK+++ GYG
Sbjct: 4091 IFGWGHNHRGQLGGLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA 4150
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T + P ++E+L + +A GG A++ G+++ WG +D +LG
Sbjct: 4151 GGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4209
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ R+ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ R+ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 98/176 (55%), Gaps = 8/176 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG + GRLG G + L +P +KAL + + ++CG + +T +G++
Sbjct: 79 IYSWGWGD-FGRLGHG------NSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEV 131
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG N N +LG GD P L V + +A G H+ A+TD GK++ WG+G +
Sbjct: 132 YSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRY 191
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G LG ++ +P + A+ DE + +ACG + AV++ GKLY +G +K QLG
Sbjct: 192 GNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLG 247
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 99/177 (55%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WGR++ G+LGLG + +P K+ A V V ++ G T +T+ G+
Sbjct: 130 EVYSWGRNQ-NGQLGLG------DTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGK 182
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P +P + D ++ +A G H++A++ GK++++G+
Sbjct: 183 LYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSK 242
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH + +P + ALA+ +T ++ G + A+TE GKLY WG K Q+G
Sbjct: 243 YGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVG 299
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + G +P++V A+ + V+CG T+ +++ G+
Sbjct: 182 KLYGWGWGR-YGNLGLG------DRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGK 234
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P + L + I Q++ G H++ALT+ GK++ WG+
Sbjct: 235 LYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNK 294
Query: 120 HGQLGHSFTQNQKVPMVIEALAD-EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G + P +I + V ++CG + AVT+K +Y WG QLG
Sbjct: 295 FGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLG 352
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEG-QLW 61
++GR E +G+LG G +A +P + AL ++ V+CG T + ++
Sbjct: 28 SFGRGE-DGQLGHG------DAEDRLLPRIIGALNDCEISLVACGADHTTAYSATRLTIY 80
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P + L + I QIA G H LA+T DG+V+SWG +G
Sbjct: 81 SWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNG 140
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T + VP + A V +A G +AAVT+ GKLY WG + LG+
Sbjct: 141 QLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGL 196
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V VS G T+ L + ++G + +LG GD P+++ L D I +A G
Sbjct: 7 VLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGA 66
Query: 101 YHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
H+ A + ++SWG+G G+LGH + + VP I+AL + IACG S AVT
Sbjct: 67 DHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVT 126
Query: 160 EKGKLYMWGNAKDSQLGV 177
G++Y WG ++ QLG+
Sbjct: 127 ADGEVYSWGRNQNGQLGL 144
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 79/147 (53%), Gaps = 17/147 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LYT+G + G+LG G + A L +P +V AL + VS G T+ LTE G+
Sbjct: 234 KLYTYGWSK-YGQLGHG-----DYADHL-LPHQVAALAEFNITQVSGGWRHTVALTEAGK 286
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV-----RIIQIANGGYHSLALTDDGKVFS 114
L+ WG N ++G GD P L+ + R++Q++ G H++A+TD V+S
Sbjct: 287 LYGWGWNKFGQVGSGDV----DDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYS 342
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALA 141
WG G GQLGH ++ P I+AL+
Sbjct: 343 WGRGTSGQLGHGDAVDRSAPKGIQALS 369
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
+++ ++ G H++AL V S+G G GQLGH +++ +P +I AL D ++ +ACG
Sbjct: 6 KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACG 65
Query: 152 GS-TSAAVTEKGKLYMWGNAKDSQLG 176
T+A + +Y WG +LG
Sbjct: 66 ADHTTAYSATRLTIYSWGWGDFGRLG 91
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + + V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ RI + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + +IA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG+++ G+LGLG +E S P +K+L +P A ++ GG + LT G +
Sbjct: 158 IYSWGQNQ-YGQLGLG-----SEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAI 211
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG N +LG D P LL +L +II I G H+ ALT +G VF++G GG+
Sbjct: 212 FGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH+ ++ P + L VT IACG T A V G++Y +G + QLG+
Sbjct: 272 GQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGI 329
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVPV-AAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNL 88
P +V AL + AVSCG T+ L ++GQ+++WG ++ ++G + P+ + +L
Sbjct: 75 PEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G +HSLAL+ + ++SWG +GQLG S + + P I++L+ H
Sbjct: 135 SDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAH 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IA GG S A+T G ++ WG K QLG+
Sbjct: 195 IAAGGGHSFALTISGAIFGWGRNKFGQLGL 224
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V CG T + ++G ++ G N +LG KP+ + L I+ ++ G
Sbjct: 36 VRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDK--SRKKPEQVGALDAQIIVAVSCGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
H+LAL D G+VFSWG+ HGQ+G S ++ +VP I++L+D + +ACG S A++
Sbjct: 94 AHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALS 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
++ +Y WG + QLG+
Sbjct: 154 KESNIYSWGQNQYGQLGL 171
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ S P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+LA G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P +++
Sbjct: 324 NGQLGIGSTSNKKSPSMVK 342
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ + + G H+ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH +++K P + AL + + ++CG + + A+ +KG+++ WG+A Q+GV
Sbjct: 64 GQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGV 118
>gi|350408000|ref|XP_003488267.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 534
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 31 PSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP-N 87
P KV+AL + + G G + LTEEG++++WG NS+ ELG P L+ N
Sbjct: 67 PKKVEALCGKDIKTFAYGKGPHVLALTEEGKVYSWGHNSHGELGNC-FANNMIPMLVTRN 125
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVT 146
L D I+ IA G +HSLALT++GKV++WG GQ+G S N+ PM V +LA + V
Sbjct: 126 LSDEFIVDIACGSHHSLALTNEGKVYAWGENTSGQVGKSVNINENTPMKVNSSLAGKTVI 185
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG-LPVVQPCPV 188
I+CG S+S VT+ GK+Y WG QLG+ + V PC V
Sbjct: 186 CISCGQSSSMTVTDTGKVYGWGCNDVGQLGIGNYVNQVDPCKV 228
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+++T + ++ G+N++ LG GD + PK + L I A G G H LALT++G
Sbjct: 37 LIITRDKIVYALGSNTSGCLGTGDDCNTFYPKKVEALCGKDIKTFAYGKGPHVLALTEEG 96
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
KV+SWG+ HG+LG+ F N +V L+DEF+ IACG S A+T +GK+Y WG
Sbjct: 97 KVYSWGHNSHGELGNCFANNMIPMLVTRNLSDEFIVDIACGSHHSLALTNEGKVYAWGEN 156
Query: 171 KDSQLG 176
Q+G
Sbjct: 157 TSGQVG 162
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 10/191 (5%)
Query: 1 ELYTWGRD-EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GE LG N L + V +A CG ++ LT EG+
Sbjct: 97 KVYSWGHNSHGE----LGNCFANNMIPMLVTRNLSDEFIVDIA---CGSHHSLALTNEGK 149
Query: 60 LWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG N++ ++G+ + P K+ +L +I I+ G S+ +TD GKV+ WG
Sbjct: 150 VYAWGENTSGQVGKSVNINENTPMKVNSSLAGKTVICISCGQSSSMTVTDTGKVYGWGCN 209
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLG NQ P + LA + I CG + A++ KG LY+WG QLG+
Sbjct: 210 DVGQLGIGNYVNQVDPCKVTMLAGVVIEKIVCGYAHVLALSNKGALYVWGGNNYGQLGL- 268
Query: 179 GLPVVQPCPVE 189
G+ + PV+
Sbjct: 269 GMKMNICSPVQ 279
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV--PVAAVSCGGFFTMVLTEEG 58
++Y WG + G++G N P KV + V +SCG +M +T+ G
Sbjct: 149 KVYAWGENTS-GQVGKSVNINENT------PMKVNSSLAGKTVICISCGQSSSMTVTDTG 201
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N +LG G+ V P + L V I +I G H LAL++ G ++ WG
Sbjct: 202 KVYGWGCNDVGQLGIGNYVNQVDPCKVTMLAGVVIEKIVCGYAHVLALSNKGALYVWGGN 261
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACG--GSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG N P+ ++ A V +A S A+ E +++MWG +
Sbjct: 262 NYGQLGLGMKMNICSPVQLKQEAMRRVLDVATSHYNHISIAMAEGNRIFMWGECLGQSIT 321
Query: 177 VPGLPVV 183
P L +
Sbjct: 322 FPVLTTL 328
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 105/199 (52%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTM 52
LYT DE G LGLG + E P K+ +L +A +S G G +
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDIQSTIE------PRKLDSLSGKKIACLSYGSGPHVV 112
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
+ T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ + IACG S AV + G++++WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYN 232
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 233 GNGQLGL-GSSGNQPTPCR 250
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V + ++CG +M + + G
Sbjct: 172 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 225 EVFVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 285 SYGQLGTGNKSNQSYPTPVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVL 344
Query: 178 PGL 180
P L
Sbjct: 345 PYL 347
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
Length = 958
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ +G+LG+G S P V+ L VP+ +S G +M L+ G
Sbjct: 167 ELFAWGQN-LDGQLGVG-----RIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGN 220
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P + L D ++ +A GG H+ LT G VF++G G
Sbjct: 221 VYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGK 280
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ K+ QLG
Sbjct: 281 YGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLG 338
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 84/137 (61%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N + +LG G P+++ NL V ++QI+ G
Sbjct: 149 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAG 208
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ G V+SWG GQLG T N++ P IEAL D+ V +ACGG +A +T
Sbjct: 209 EAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLT 268
Query: 160 EKGKLYMWGNAKDSQLG 176
+ G ++ +G+ K QLG
Sbjct: 269 KSGLVFTFGDGKYGQLG 285
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 9/135 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WGR++ G+LGLG PS ++AL V ++CGG T +LT+ G +
Sbjct: 221 VYSWGRNDC-GQLGLGHTYNKES------PSCIEALDDQKVEFLACGGCHTALLTKSGLV 273
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA-LTDDGKVFSWGYGG 119
+ +G +LG +P+L+ LV R+ QIA G H+LA ++D GKVFS+G G
Sbjct: 274 FTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGK 333
Query: 120 HGQLGHSFTQNQKVP 134
GQLG+ T+NQ +P
Sbjct: 334 EGQLGNGGTRNQLIP 348
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVT 146
L + IIQI G YHSLAL+ G++F+WG GQLG + P ++E L+ +
Sbjct: 144 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLV 203
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
I+ G + S A++ G +Y WG QLG+
Sbjct: 204 QISAGEAHSMALSMSGNVYSWGRNDCGQLGL 234
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
G KPK + ++I + G H L L+ DGK F + Y + H+ Q
Sbjct: 94 GARKPKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYS----IEHARFQC------- 142
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L ++ + I CG S A+++ G+L+ WG D QLGV
Sbjct: 143 -ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGV 181
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ R+ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + +IA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
Length = 1009
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ +G+LG+G S P V+ L VP+ +S G +M L+ G
Sbjct: 142 ELFAWGQN-LDGQLGVG-----RIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGN 195
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P + L D ++ +A GG H+ LT G VF++G G
Sbjct: 196 VYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTALLTKSGLVFTFGDGK 255
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ K+ QLG
Sbjct: 256 YGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLG 313
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N + +LG G P+++ NL V ++QI+ G
Sbjct: 124 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAG 183
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ G V+SWG GQLG T N+ P IE L D+ V +ACGG +A +T
Sbjct: 184 EAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTALLT 243
Query: 160 EKGKLYMWGNAKDSQLG 176
+ G ++ +G+ K QLG
Sbjct: 244 KSGLVFTFGDGKYGQLG 260
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 78/135 (57%), Gaps = 9/135 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WGR++ G+LGLG + PS ++ L V ++CGG T +LT+ G +
Sbjct: 196 VYSWGRNDC-GQLGLGHTYNKDS------PSCIETLDDQKVEFLACGGCHTALLTKSGLV 248
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA-LTDDGKVFSWGYGG 119
+ +G +LG +P+L+ LV R+ QIA G H+LA ++D GKVFS+G G
Sbjct: 249 FTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGK 308
Query: 120 HGQLGHSFTQNQKVP 134
GQLG+ T+NQ +P
Sbjct: 309 EGQLGNGGTRNQLIP 323
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVT 146
L + IIQI G YHSLAL+ G++F+WG GQLG + P ++E L+ +
Sbjct: 119 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLV 178
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
I+ G + S A++ G +Y WG QLG+
Sbjct: 179 QISAGEAHSMALSMSGNVYSWGRNDCGQLGL 209
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
G KPK + ++I + G H L L+ DGK F + Y + H+ Q
Sbjct: 69 GARKPKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYS----IEHARFQC------- 117
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L ++ + I CG S A+++ G+L+ WG D QLGV
Sbjct: 118 -ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGV 156
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 16/198 (8%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
LYT DE G LGLG + E L S K +A +S G +VL
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKK-----IACLSYGSGPHIVL 113
Query: 55 -TEEGQLWNWGANSNYELGRGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKV 112
T EG++++WG N+ +LG G G P + NL + ++ ++A G YHSL LT DG+V
Sbjct: 114 ATTEGEVFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEV 173
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
F+WGY GQ+G T NQ +P + L ++ V +IACG S AV + G++Y+WG
Sbjct: 174 FAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNG 233
Query: 172 DSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 234 NGQLGL-GSSGNQPTPCR 250
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G N+A IP +V V ++CG +M + + G
Sbjct: 172 EVFAWGYNNS-GQVG--SGSTANQA----IPRRVTGCLQNKVVVNIACGQMCSMAVVDTG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 225 EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + + +
Sbjct: 285 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVTL 344
Query: 178 PGL 180
P L
Sbjct: 345 PHL 347
>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
Length = 551
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 106/199 (53%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A++S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIASLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P ++ NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P + L ++ V IACG AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 233 GNGQLGL-GSSGNQPTPCR 250
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 172 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 223
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 343
Query: 177 VPGL 180
+P L
Sbjct: 344 LPHL 347
>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
Length = 988
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 60/186 (32%), Positives = 102/186 (54%), Gaps = 18/186 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-----VPVAAVSCGGFFTMVLT 55
+LY +G G+G+LG P ++A + +P V P V V +++ G T+ L+
Sbjct: 5 QLYVFGC-AGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLS 63
Query: 56 EEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
++G++W+ G+N N ELGRG R G + + V IIQI+ G HS+A++DDG++F+
Sbjct: 64 DDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSMAVSDDGRLFA 123
Query: 115 WGYGGHGQLGHS-----FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
WG HGQL S ++VP + E + +ACG S + ++ G++++WG
Sbjct: 124 WGSNSHGQLAMSGDILASDTPKRVPSLPETV------QVACGASHTVSLNGGGRVFIWGQ 177
Query: 170 AKDSQL 175
D ++
Sbjct: 178 QSDGRI 183
Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 11/172 (6%)
Query: 19 GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRV 77
GRG G +I + V + +S G +M ++++G+L+ WG+NS+ +L GD +
Sbjct: 80 GRGGVREGSYTIYPVHISSTVSIIQISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDIL 139
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
PK +P+L + +Q+A G H+++L G+VF WG G++ HS P +
Sbjct: 140 ASDTPKRVPSLPET--VQVACGASHTVSLNGGGRVFIWGQQSDGRIRHS-------PAEV 190
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG-VPGLPVVQPCPV 188
E + I+ G + A+T G L+ WG ++ QLG VV PC V
Sbjct: 191 EIFISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDFTNKDVVNPCAV 242
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 31 PSKVKA-LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P++V+ + +P+ +S G FTM LT G L+ WG N +LG P +PN+
Sbjct: 187 PAEVEIFISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDFTNKDVVNPCAVPNIN 246
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHI 148
V + + G HS+ALT +G+VFS G GQLG ++Q I + VT I
Sbjct: 247 SV--VAVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRI 304
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
AC G V GK++ +G + QLG
Sbjct: 305 AC-GRCHTIVVANGKMHTFGLNSNGQLG 331
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 30/152 (19%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP----VAAVSCGGFFTMVLTEE 57
L+ WG++E EG+LG + V VP V AV CG ++ LT E
Sbjct: 217 LFAWGKNE-EGQLG-----------DFTNKDVVNPCAVPNINSVVAVECGDSHSIALTHE 264
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPN-------LVDVRIIQIANGGYHSLALTDDG 110
G++++ G++S +LG G +P N ++ + +IA G H++ + + G
Sbjct: 265 GRVFSCGSDSFGQLGCG------QPNRSQNCMRGITEMLGSHVTRIACGRCHTIVVAN-G 317
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD 142
K+ ++G +GQLGH T+NQ P VI+++ +
Sbjct: 318 KMHTFGLNSNGQLGHGNTRNQITPRVIDSVEN 349
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 106/199 (53%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A++S G +V
Sbjct: 64 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIASLSYGSGPHIV 117
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P ++ NL + ++I++A G YHSL LT DG+
Sbjct: 118 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGE 177
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P + L ++ V IACG AV + G++Y+WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 238 GNGQLGL-GSSGNQPTPCR 255
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 177 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 228
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 229 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 288
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 289 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 348
Query: 177 VPGL 180
+P L
Sbjct: 349 LPHL 352
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT +ACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ+++WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+ WG + G+LGLG G +E L P K V V CG T+ + ++G +
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLE-PRKSDFFANKKVRDVGCGLRHTVFVLDDGTV 55
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ G N +LG KP+ + L I+ ++ G H+LAL D G+V+SWG
Sbjct: 56 YTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSD 113
Query: 121 GQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + Q+A G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ + ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLG 120
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G HSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
Length = 897
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 5/176 (2%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y WG D +G+LG+ N P ++K+L V V+CG ++ + +G +
Sbjct: 106 IYAWG-DNSDGQLGV---TDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTV 161
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG+N +LG V +PK + L I+QIA GG HSLA+T+ G + +WG
Sbjct: 162 FSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSF 221
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG P + +L + + + ACG +A +T++G ++ +G QLG
Sbjct: 222 GQLGLGTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLG 277
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 45 SCGGFFTMVLTEEGQLWNWGANSNYELGRGD---RVGGWKPKLLPNLVDVRIIQIANGGY 101
S G + + ++ ++ WG NS+ +LG D + P+ + +L ++Q+A G
Sbjct: 91 SNGANHNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQS 150
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
HSLA+ +DG VFSWG +GQLG + P I L+ ++ IA GG+ S A+T
Sbjct: 151 HSLAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNS 210
Query: 162 GKLYMWGNAKDSQLGV 177
G L WG QLG+
Sbjct: 211 GALLTWGKNSFGQLGL 226
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG+ EG+LGLG G +E L + +SCG T++L ++GQ++
Sbjct: 1 MFAWGK-AIEGQLGLG---GIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQI-ANGGYHSLALTDDGKVFSWGYGGH 120
+ G+N + GR + + + +RI + +NG H+LA+ D +++WG
Sbjct: 57 SCGSNDYGQTGR--QRNNKRFARIDAFESMRITNVSSNGANHNLAINDKNCIYAWGDNSD 114
Query: 121 GQLG---HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + Q + P I++L+ V +ACG S S AV G ++ WG+ + QLG+
Sbjct: 115 GQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGI 174
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
Query: 21 GPNEAGGLSIPSKVKALPVP---------VAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
G N G L I S V ++ + ++ GG ++ +T G L WG NS +L
Sbjct: 165 GSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQL 224
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G G G P + +L I A G H+ LT +G VF++G G GQLGH+ +
Sbjct: 225 GLGTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSHH 284
Query: 132 KVPMVIEALADEFVTHIACG 151
P ++ L VT I CG
Sbjct: 285 CSPQMVVDLMGIVVTQITCG 304
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
L TWG++ G+LGLG G+ P+ V +L +A +CG T VLT+EG +
Sbjct: 213 LLTWGKNSF-GQLGLGTN------DGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGV 265
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSL 104
+ +GA S+ +LG P+++ +L+ + + QI G +++L
Sbjct: 266 FTFGAGSSGQLGHNSLSHHCSPQMVVDLMGIVVTQITCGRFYAL 309
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ R+ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
Length = 429
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 14/187 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG +E +LGLG ++P +V+AL V + VSCG +FT + +G+
Sbjct: 103 KLYVWGSNE-YSKLGLGESSEME-----TLPREVEALKGVKIVDVSCGDYFTAAVDADGK 156
Query: 60 LWNWG-ANSNYELGRGDRVGGWK----PKLLPNLVD--VRIIQIANGGYHSLALTDDGKV 112
+++WG S + G G K P+LL LVD V I+ + G +H++AL+ DG++
Sbjct: 157 MYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEI 216
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
++WG G +G+LG+ + +VP IE + + V IA G S A+T+ G+LY WG
Sbjct: 217 WAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDNGELYSWGGNSQ 276
Query: 173 SQLGVPG 179
+QLG+ G
Sbjct: 277 NQLGIGG 283
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 6/137 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VP+ V CG F T+ L+++G++W WG LG G+ P+ + ++ IA
Sbjct: 195 VPILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAA 254
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLG------HSFTQNQKVPMVIEALADEFVTHIACGG 152
G S ALTD+G+++SWG QLG + +P+++EA V IA G
Sbjct: 255 GRDFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGY 314
Query: 153 STSAAVTEKGKLYMWGN 169
+AAVT+ G+LYMWG+
Sbjct: 315 DHAAAVTDDGRLYMWGS 331
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 13/152 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + + +LG+G G + SIP V+A + V ++ G +T++G+
Sbjct: 267 ELYSWGGN-SQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGR 325
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG+ E P + + + +++Q+A G +++AL+++G+VF++G G
Sbjct: 326 LYMWGSKIWIE-----------PHEMTAVNEYKMVQVACGRQYTVALSENGEVFTFGKGS 374
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
LGH +NQ P+ IEALAD +T I+CG
Sbjct: 375 SNCLGHGDRKNQLQPVQIEALADVNITSISCG 406
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 25/183 (13%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
E++ WG E GRLG G E+ +P ++ V +++ G F+ LT+ G+
Sbjct: 215 EIWAWGNGE-YGRLGNG------ESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDNGE 267
Query: 60 LWNWGANSNYELGRGD--RVGGWKPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVF 113
L++WG NS +LG G + + + +P LV+ + + QIA G H+ A+TDDG+++
Sbjct: 268 LYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLY 327
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
WG ++ P + A+ + + +ACG + A++E G+++ +G +
Sbjct: 328 MWG-----------SKIWIEPHEMTAVNEYKMVQVACGRQYTVALSENGEVFTFGKGSSN 376
Query: 174 QLG 176
LG
Sbjct: 377 CLG 379
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 96/186 (51%), Gaps = 12/186 (6%)
Query: 2 LYTWGRDEGEGRLGLGP--GRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
+YTWG G+LG GP G A P ++A + V G + + E+G
Sbjct: 44 VYTWGNGT-LGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHSAAIDEDG 102
Query: 59 QLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+L+ WG+N +LG G+ P+ + L V+I+ ++ G Y + A+ DGK++SWG+
Sbjct: 103 KLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSWGW 162
Query: 118 GGHGQ-----LGHSFTQNQKVPMVIEALADEFV--THIACGGSTSAAVTEKGKLYMWGNA 170
GG LGH+ +++ P ++ L D+ V + CG + A+++ G+++ WGN
Sbjct: 163 GGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWAWGNG 222
Query: 171 KDSQLG 176
+ +LG
Sbjct: 223 EYGRLG 228
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGG--------WKPKLLPNLVDVRIIQIANGGYHSLA 105
+ + ++ WG + +LG G V PKLL I + G HS A
Sbjct: 38 FSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHSAA 97
Query: 106 LTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
+ +DGK++ WG + +LG ++ + +P +EAL + ++CG +AAV GK+
Sbjct: 98 IDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKM 157
Query: 165 YMWG 168
Y WG
Sbjct: 158 YSWG 161
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 105 ALTDDGKVFSWGYGGHGQLGH-----SFTQN---QKVPMVIEALADEFVTHIACGGSTSA 156
A + V++WG G GQLGH S +N + P ++EA + +TH+ G S SA
Sbjct: 37 AFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHSA 96
Query: 157 AVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
A+ E GKLY+WG+ + S+LG+ ++ P E
Sbjct: 97 AIDEDGKLYVWGSNEYSKLGLGESSEMETLPRE 129
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ R+ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ R+ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G HSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 100/190 (52%), Gaps = 18/190 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ-L 60
LYTWG D GRLG G + SIP+ VK + V +VSCG FT+V++++ +
Sbjct: 543 LYTWG-DGDYGRLGHG------DNHSRSIPTLVKDI-TGVGSVSCGSSFTVVISQDATTV 594
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG-- 118
W++GA N +LG GD ++PK++ NL + I ++ SLALT G+VF WG G
Sbjct: 595 WSFGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPC 654
Query: 119 -GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ--L 175
G+GQ +F VP ++ D + IA G + A+T +Y WGN Q L
Sbjct: 655 LGYGQADATFL----VPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGL 710
Query: 176 GVPGLPVVQP 185
G PV+ P
Sbjct: 711 GNNNSPVLLP 720
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/190 (32%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P++V AL P+ V ++CG T+V+T + +
Sbjct: 3564 KLFTFGASD-LGRLGLG------NTSNKKLPAQVTALQPIMVELIACGANHTVVVTTDRE 3616
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W +G +LG G P+ + + I +I G +LALT +GKV+S G+
Sbjct: 3617 SVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHN 3676
Query: 119 GHGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ TQ+ P + AL+++F+ IA G + A+T++G ++ WGN D QLG+
Sbjct: 3677 RCNGIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGL 3736
Query: 178 -PGLPVVQPC 186
LP +PC
Sbjct: 3737 GQTLPQREPC 3746
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 64/182 (35%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E YTWG G+L E+G L + + + + CG T V+ +G +
Sbjct: 3408 EAYTWGGGR-HGQLA--------ESGRLVLQPTLTSSFSKAKQIHCGHNSTFVIEHDGTV 3458
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLP--NLVDVRIIQIANGGY---HSLALTDDGKVFSW 115
G S LG+G+ P+L P L + ++A HSLALT+ G+VFSW
Sbjct: 3459 LACGEGSYGRLGQGNSDD--LPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSW 3516
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G +G+LGH ++ Q+ P IEAL E V H+ACG SA VT GKL+ +G + +L
Sbjct: 3517 GDGDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRL 3576
Query: 176 GV 177
G+
Sbjct: 3577 GL 3578
Score = 75.9 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 88/167 (52%), Gaps = 6/167 (3%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLGLG N + + K + + S G T+ + +G++++WG +L
Sbjct: 444 GRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDG--HTLAIASDGRIYSWGDGDYGKL 501
Query: 72 GRGDRVGGWKPKLLPNLVDVRII-QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
G G+ V PKL+ + +++ QIA G HS A+T +G +++WG G +G+LGH +
Sbjct: 502 GHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHS 561
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKG-KLYMWGNAKDSQLG 176
+ +P +++ + V ++CG S + +++ ++ +G + +LG
Sbjct: 562 RSIPTLVKDITG--VGSVSCGSSFTVVISQDATTVWSFGAGDNGKLG 606
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
++ LTE G++++WG +LG G+ +P+ + L ++ +A G HS +T DG
Sbjct: 3504 SLALTETGEVFSWGDGDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDG 3563
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV-TEKGKLYMWGN 169
K+F++G G+LG T N+K+P + AL V IACG + + V T++ ++ +G
Sbjct: 3564 KLFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGE 3623
Query: 170 AKDSQLGV 177
+ QLG+
Sbjct: 3624 GEYGQLGL 3631
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 32/153 (20%)
Query: 56 EEGQLWNWGANSNYE----------------------------LGRGDRVGGWKPKLLPN 87
+E ++ WG+NS+Y+ LG GD +PKL+
Sbjct: 403 KESHVYVWGSNSSYQLGISEPEKMLIPHLTPSFANSEQGNYGRLGLGDSSNQNRPKLIRF 462
Query: 88 LVDVRIIQIAN---GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP-MVIEALADE 143
+ +I + + H+LA+ DG+++SWG G +G+LGH QK P +++ + +
Sbjct: 463 EHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGHGNHVTQKSPKLILGPMQGK 522
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V IA G SAA+T +G LY WG+ +LG
Sbjct: 523 VVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLG 555
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W EGE G+LGLG P V A + + + CG FT+ LT+EG++++
Sbjct: 3619 WTFGEGEYGQLGLG------RTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYS 3672
Query: 63 WGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N + D + + P+ + L + I IA G H+LALT +G V+SWG G
Sbjct: 3673 CGHNRCNGIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDG 3732
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
QLG T Q+ P +I +L + + I+ G + SAA T
Sbjct: 3733 QLGLGQTLPQREPCLISSLQGKGIRQISAGHNHSAAWT 3770
Score = 72.4 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG D G+LG G P +++AL V V+CG + ++T +G+
Sbjct: 3512 EVFSWG-DGDYGKLGHGNSERQRR------PRQIEALRGEDVLHVACGHKHSAIVTVDGK 3564
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYG 118
L+ +GA+ LG G+ P + L + + IA G H++ +T D + V+++G G
Sbjct: 3565 LFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEG 3624
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
+GQLG T + P ++A + + I CG + A+T++GK+Y G+ +
Sbjct: 3625 EYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNR 3677
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 109/184 (59%), Gaps = 6/184 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y G ++ G+LG PN+ +S ++ +L + +SCG ++ LT GQ
Sbjct: 56 KMYACGNND-HGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQ 114
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG+N+ +LG G P+++ + ++QIA+G YH LALT++G++++WG
Sbjct: 115 VFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSN 174
Query: 119 GHGQLGHSFTQNQKVPM--VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG T ++KVPM +I++LA + IACGG+ S AV++ G ++ WG QLG
Sbjct: 175 SYGQLGIG-TTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 233
Query: 177 VPGL 180
+ L
Sbjct: 234 LNDL 237
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALPVPVAAVSCGGFFTMVLTEEGQL 60
+Y WG + G LGLG E + +P K+ + V V CG T+ LT+EG++
Sbjct: 3 IYCWG-NTAHGELGLGGI----EEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKM 57
Query: 61 WNWGANSNYELGRG-DRVGGWKPKL-----LPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
+ G N + +LG D + +P++ L +L + I I+ G HSLALT+ G+VFS
Sbjct: 58 YACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFS 117
Query: 115 WGYGGHGQLGHSFTQ-NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
WG GQLGH Q P +I+A+ + V IA G A+T G+LY WG+
Sbjct: 118 WGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYG 177
Query: 174 QLGVPGLPVVQPCPV 188
QLG+ P P
Sbjct: 178 QLGIGTTSEKVPMPT 192
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG + G+LG+G + + +P+ +++L VP+A ++CGG + +++ G
Sbjct: 167 ELYAWGSN-SYGQLGIG-----TTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGA 220
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + + I+ G S+ LT++G VF+ G G
Sbjct: 221 IFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGT 280
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH N+ VP + L +T IACG T A V +GK+Y +G QLG+
Sbjct: 281 FGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGI 339
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL N+ P++++ L + V +SCG F++ LT EG +
Sbjct: 221 IFGWGKNTF-GQLGL------NDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGV 273
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+ + L+ +I QIA G H+LA GK++ +G GG
Sbjct: 274 FTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGG 333
Query: 120 HGQLGHSFTQNQKVPMVIE 138
GQLG N P ++
Sbjct: 334 VGQLGIGMVGNHSTPQIVR 352
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGL-----DCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 106/199 (53%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A++S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIASLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P ++ NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 233 GNGQLGL-GSSGNQPTPCR 250
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 172 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 223
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 343
Query: 177 VPGL 180
+P L
Sbjct: 344 LPHL 347
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ R+ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 106/199 (53%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A++S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIASLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P ++ NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 233 GNGQLGL-GSSGNQPTPCR 250
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 172 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 223
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 343
Query: 177 VPGL 180
+P L
Sbjct: 344 LPHL 347
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
Length = 1034
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 60/180 (33%), Positives = 103/180 (57%), Gaps = 13/180 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLS-IPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++TWG EG+LG+G E+ +S +P+K+ +L + + VSCG + ++ L+E+GQ
Sbjct: 101 VFTWGAGS-EGQLGIG------ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQ 153
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG+N +LG G+ + P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 154 VFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNN 213
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G+S + P I AL V +I+CG ++ +TE G+++ +G + QL
Sbjct: 214 RSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL 273
Score = 99.0 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 61/181 (33%), Positives = 100/181 (55%), Gaps = 10/181 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+ G D G+LG + P P ++AL V + VSCG ++ + +G++
Sbjct: 49 VYSCG-DNSRGQLG---QKSPQST---KRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRV 101
Query: 61 WNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WGA S +LG G+ + + P + +L ++IIQ++ G YHSLAL++DG+VFSWG
Sbjct: 102 FTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNR 161
Query: 120 HGQLGHSFTQ-NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLG +Q P +++L + +A GG+ S A++ G + WGN + QL +
Sbjct: 162 QGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALS 221
Query: 179 G 179
G
Sbjct: 222 G 222
Score = 75.9 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 12/173 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG + +G+LGLG N + P KVK+L +P+A V+ GG + L+ G
Sbjct: 153 QVFSWGSNR-QGQLGLG-----NNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGT 206
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG N + +L G + +KP + L + ++ I+ G H+ LT+DG+VF++G
Sbjct: 207 SFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFG 266
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWG 168
QL HS + P +IE + V+ I CG T A V G++ G
Sbjct: 267 GSSSEQLQHSPRSGRGGPQLIEGIGGH-VSQIECGSYHTIAYVYTTGQVVSLG 318
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++++ G NS +LG+ +P+ + L V I ++ G HS+A+ G
Sbjct: 40 SLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQG 99
Query: 111 KVFSWGYGGHGQLGHSFTQNQK-VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG ++ +P I +LA + ++CG S A++E G+++ WG+
Sbjct: 100 RVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGS 159
Query: 170 AKDSQLGV 177
+ QLG+
Sbjct: 160 NRQGQLGL 167
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 56/100 (56%)
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
G +P+ L +++++ A+G HSL L + +V+S G GQLG Q+ K P I
Sbjct: 15 GRRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPI 74
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+AL+ + ++CG S AV +G+++ WG + QLG+
Sbjct: 75 QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI 114
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 52 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIACLSYGSGPHIV 105
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 106 LATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGE 165
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P + L + V +IACG S AV G++++WG
Sbjct: 166 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYN 225
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 226 GNGQLGL-GSSGNQPTPCR 243
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + SKV V ++CG +M +
Sbjct: 165 EVFAWGYNNS-GQVGSGSTANQPIPRRVTG-CLQSKV------VVNIACGQMCSMAVVNT 216
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 217 GEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 276
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC TSAA T+ G +YMWG + +
Sbjct: 277 NSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVT 336
Query: 177 VPGL 180
+P L
Sbjct: 337 LPHL 340
>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
Length = 1017
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 22/188 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-----VPVAAVSCGGFFTMVLT 55
+LY +G +G+L P N+A + P V P V V AV+ G T+ L
Sbjct: 5 QLYVFGC-ASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLA 63
Query: 56 EEGQLWNWGANSNYELGRGD-RVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
+G++W+ G+N N ELGRG + G + P + N V RIIQI+ G HS+A++DDG++
Sbjct: 64 NDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAV--RIIQISAGRSHSMAVSDDGRL 121
Query: 113 FSWGYGGHGQLGHS-----FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
F+WG HGQL S ++VP + E + +ACG S + ++ G++++W
Sbjct: 122 FAWGSNSHGQLAMSGDILISDTPKRVPSLPETV------QVACGASHTVSLNGGGRVFIW 175
Query: 168 GNAKDSQL 175
G D ++
Sbjct: 176 GQQSDGRI 183
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 5/148 (3%)
Query: 31 PSKVKA-LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P++V+ + VP+ +S G FTM LT G L+ WG N +LG P+ +PN+
Sbjct: 187 PAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNIN 246
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHI 148
V +++ G HS+ALT +G+VFS G GQLG +++Q I + VT I
Sbjct: 247 SVVVVEC--GDSHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRI 304
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
AC G V GK++ +G + QLG
Sbjct: 305 AC-GRCHTIVVANGKMHTFGLNSNGQLG 331
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 19 GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRV 77
GRG + G +I + V + +S G +M ++++G+L+ WG+NS+ +L GD +
Sbjct: 80 GRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDIL 139
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
PK +P+L + +Q+A G H+++L G+VF WG G++ HS P +
Sbjct: 140 ISDTPKRVPSLPET--VQVACGASHTVSLNGGGRVFIWGQQSDGRIRHS-------PAEV 190
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
E + I+ G + A+T G L+ WG ++ QLG
Sbjct: 191 ELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLG 229
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 59 QLWNWGANSNYELG-RGDRVGG-WKPKLLPNLV--------DVRIIQIANGGYHSLALTD 108
QL+ +G S+ +L R + G + L P+LV V + +A+G H+L L +
Sbjct: 5 QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAN 64
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKGKLYMW 167
DGKV+S G +G+LG + + +++ + I+ G S S AV++ G+L+ W
Sbjct: 65 DGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAW 124
Query: 168 GNAKDSQLGVPGLPVVQPCP 187
G+ QL + G ++ P
Sbjct: 125 GSNSHGQLAMSGDILISDTP 144
>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
Length = 1043
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 22/188 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-----VPVAAVSCGGFFTMVLT 55
+LY +G +G+L P N+A + P V P V V AV+ G T+ L
Sbjct: 5 QLYVFGC-ASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLA 63
Query: 56 EEGQLWNWGANSNYELGRGD-RVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
+G++W+ G+N N ELGRG + G + P + N V RIIQI+ G HS+A++DDG++
Sbjct: 64 NDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAV--RIIQISAGRSHSMAVSDDGRL 121
Query: 113 FSWGYGGHGQLGHS-----FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
F+WG HGQL S ++VP + E + +ACG S + ++ G++++W
Sbjct: 122 FAWGSNSHGQLAMSGDILISDTPKRVPSLPETV------QVACGASHTVSLNGGGRVFIW 175
Query: 168 GNAKDSQL 175
G D ++
Sbjct: 176 GQQSDGRI 183
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 5/148 (3%)
Query: 31 PSKVKA-LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P++V+ + VP+ +S G FTM LT G L+ WG N +LG P+ +PN+
Sbjct: 187 PAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNIN 246
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHI 148
V +++ G HS+ALT +G+VFS G GQLG +++Q I + VT I
Sbjct: 247 SVVVVEC--GDSHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRI 304
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
AC G V GK++ +G + QLG
Sbjct: 305 AC-GRCHTIVVANGKMHTFGLNSNGQLG 331
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 19 GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRV 77
GRG + G +I + V + +S G +M ++++G+L+ WG+NS+ +L GD +
Sbjct: 80 GRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDIL 139
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
PK +P+L + +Q+A G H+++L G+VF WG G++ HS P +
Sbjct: 140 ISDTPKRVPSLPET--VQVACGASHTVSLNGGGRVFIWGQQSDGRIRHS-------PAEV 190
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
E + I+ G + A+T G L+ WG ++ QLG
Sbjct: 191 ELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLG 229
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 59 QLWNWGANSNYELG-RGDRVGG-WKPKLLPNLV--------DVRIIQIANGGYHSLALTD 108
QL+ +G S+ +L R + G + L P+LV V + +A+G H+L L +
Sbjct: 5 QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAN 64
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKGKLYMW 167
DGKV+S G +G+LG + + +++ + I+ G S S AV++ G+L+ W
Sbjct: 65 DGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAW 124
Query: 168 GNAKDSQLGVPGLPVVQPCP 187
G+ QL + G ++ P
Sbjct: 125 GSNSHGQLAMSGDILISDTP 144
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG E + P +K+L +P A ++ GG + VLT G
Sbjct: 157 EVFSWGQNK-YGQLGLG-----YEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +++ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT I CG T+A V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 97/179 (54%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRG-PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+YT G ++ G+LG R P G L + + AVSCG T+ L ++GQ+
Sbjct: 55 VYTCGCND-LGQLGHEKARKRPEHVGALDAQN--------IVAVSCGEAHTLALNDKGQV 105
Query: 61 WNWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG ++ +LG G P+ + +L +++I+Q+A G YHSLAL+ +VFSWG
Sbjct: 106 YAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNK 165
Query: 120 HGQLGHSFT-QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG + + Q P +I++L IA GG+ S +T G ++ WG K QLG+
Sbjct: 166 YGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L L V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG +P+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGHEK--ARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T+ +VP I +L++ + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL 171
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ R+ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH + +K P + AL + + ++CG + + A+ +KG++Y WG A D QLG+PG
Sbjct: 64 GQLGHE--KARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPG 120
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L V + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QI G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGTTSNRKSPFTVK 342
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 99/182 (54%), Gaps = 11/182 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVL-TEEGQLWNWGANSNY 69
G LGLG + E P ++ AL +A +S G +VL T EG+++ WG N+
Sbjct: 76 GCLGLGDVQSTIE------PRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 129
Query: 70 ELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G G P + NL + ++ ++A G YHSL LT DG+VF+WGY GQ+G T
Sbjct: 130 QLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST 189
Query: 129 QNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
NQ +P V L ++ V +IACG S AV G++Y+WG + QLG+ G QP P
Sbjct: 190 ANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGL-GSSGNQPTP 248
Query: 188 VE 189
Sbjct: 249 CR 250
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG +M + G
Sbjct: 172 EVFAWGYNN-SGQVGSG------STANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +RI ++A G H+L LTD+G+V++WG
Sbjct: 225 EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D V AC TSAA T+ G +YMWG + + +
Sbjct: 285 SYGQLGTGNKSNQSYPAPVVVEKDRIVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVL 344
Query: 178 PGL 180
P L
Sbjct: 345 PHL 347
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIACLSYGSGPHIV 88
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGE 148
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P + L + V +IACG S AV G++++WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYN 208
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 209 GNGQLGL-GSSGNQPTPCR 226
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + SKV V ++CG +M +
Sbjct: 148 EVFAWGYNNS-GQVGSGSTANQPIPRRVTG-CLQSKV------VVNIACGQMCSMAVVNT 199
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 200 GEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 259
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC TSAA T+ G +YMWG + +
Sbjct: 260 NSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVT 319
Query: 177 VPGL 180
+P L
Sbjct: 320 LPHL 323
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ R+ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + +IA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 591
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 15/184 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y G +E G+LG+G NEA +S P+ V LP + ++CG + L+E G+L
Sbjct: 315 EVYACGNNE-HGQLGIGS----NEA--MSEPTLVTNLPERIVRIACGNSHAVALSETGRL 367
Query: 61 WNWGANSNYELGRG----DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WGA+S+ +LG G DR+ ++ N+V + A GG H++ L++ G ++++G
Sbjct: 368 YAWGAHSSGQLGVGEPLEDRLS--PVRVESNVVRDDVADFACGGNHTIILSNSGLLYAFG 425
Query: 117 YGGHGQLGHS--FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G GQLG T+NQ P + T I+CG SAAV+++GK+Y WG+ +
Sbjct: 426 SGAQGQLGLGPLATKNQATPAALPNPEGRKYTAISCGQDISAAVSDRGKIYTWGSGASNA 485
Query: 175 LGVP 178
LG+P
Sbjct: 486 LGLP 489
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 98/180 (54%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E Y WGR +G LG+ E P+++ AL V +CG FT+ + E G+
Sbjct: 264 EAYVWGRGI-DGSLGV-------EGDKHVSPTQIHALDGKRVVHAACGAAFTLFVIESGE 315
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G N + +LG G +P L+ NL + RI++IA G H++AL++ G++++WG
Sbjct: 316 VYACGNNEHGQLGIGSNEAMSEPTLVTNLPE-RIVRIACGNSHAVALSETGRLYAWGAHS 374
Query: 120 HGQLGH-SFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +++ P+ +E+ + + V ACGG+ + ++ G LY +G+ QLG+
Sbjct: 375 SGQLGVGEPLEDRLSPVRVESNVVRDDVADFACGGNHTIILSNSGLLYAFGSGAQGQLGL 434
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 86/179 (48%), Gaps = 11/179 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSC-GGFFTMVLTEEG 58
++YTWG EG G LG G EA P V+AL + C G TM L G
Sbjct: 160 DVYTWG----EGTRGMLGHGEEDPEAS----PRVVEALLGHDIKMLCLGSGHTMALAVSG 211
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++++WG LG+G + P L L I IA HS+A+ D+G+ + WG G
Sbjct: 212 EVYSWGLGLGGRLGQGRERDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVWGRG 271
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G LG ++ P I AL + V H ACG + + V E G++Y GN + QLG+
Sbjct: 272 IDGSLGVEGDKHVS-PTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGI 329
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
LY WG G+LG+G P E + + + VA +CGG T++L+ G L
Sbjct: 366 RLYAWGA-HSSGQLGVGE---PLEDRLSPVRVESNVVRDDVADFACGGNHTIILSNSGLL 421
Query: 61 WNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G+ + +LG G + P LPN + I+ G S A++D GK+++WG G
Sbjct: 422 YAFGSGAQGQLGLGPLATKNQATPAALPNPEGRKYTAISCGQDISAAVSDRGKIYTWGSG 481
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
LG + + P +IE++AD+ +ACG AA G
Sbjct: 482 ASNALGLPDGRTKYAPTLIESMADKRCRTVACGFFHMAATIIHG 525
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
G ++ + ++ WG + LG G+ P+++ L+ I + G H++AL
Sbjct: 148 GSTRVLIREDASDVYTWGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHTMAL 207
Query: 107 TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
G+V+SWG G G+LG +++ P+ + L +THIAC + S AV + G+ Y+
Sbjct: 208 AVSGEVYSWGLGLGGRLGQGRERDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYV 267
Query: 167 WGNAKDSQLGVPGLPVVQPCPVE 189
WG D LGV G V P +
Sbjct: 268 WGRGIDGSLGVEGDKHVSPTQIH 290
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 106/199 (53%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LG+G + E P ++ +L +A++S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGVGDIQSTIE------PRRLDSLTGKKIASLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T +G+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG S AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 233 GNGQLGL-GSSGNQPTPCR 250
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V +++CG +M + + G
Sbjct: 172 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G++++WG
Sbjct: 225 EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA ++ G +YMWG + + +
Sbjct: 285 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQCRGQSVIL 344
Query: 178 PGL 180
P L
Sbjct: 345 PHL 347
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P ++ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IA GG+ S +T G ++ WG K QLG+
Sbjct: 195 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ R+ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + +IA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
[Ornithorhynchus anatinus]
Length = 1006
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG E + P +K+L +P ++ GG + VLT G
Sbjct: 106 EVFSWGQNK-YGQLGLG-----FEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 159
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 160 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 219
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT +ACG TSA V G++Y +G + QLG
Sbjct: 220 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 277
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 101/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y WG D +G+LGL P + +P +K+L + + VSCG + ++ L++ +
Sbjct: 53 QVYAWGLD-TDGQLGL-----PGTEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKGSE 106
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG N +LG G P+L+ +L+ + +QIA GG HS LT G +F WG
Sbjct: 107 VFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRN 166
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG + ++ VP ++++L + + +I CG +AA+T++G ++ +G QLG
Sbjct: 167 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 224
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANG 99
+ AVSCG T+ L ++GQ++ WG +++ +LG G P+ + +L D++I+Q++ G
Sbjct: 35 IVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCG 94
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTHIACGGSTSAAV 158
YHSLAL+ +VFSWG +GQLG F + Q P +I++L IA GG+ S +
Sbjct: 95 YYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVL 154
Query: 159 TEKGKLYMWGNAKDSQLGV 177
T G ++ WG K QLG+
Sbjct: 155 TLSGAIFGWGRNKFGQLGL 173
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 160 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 212
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + Q+A G H+ A G+++S+G GG
Sbjct: 213 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 272
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 273 NGQLGTGSTSNRKSPFTVK 291
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ AL + + ++CG + + A+ +KG++Y WG D QLG+PG
Sbjct: 27 VVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPG 69
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E + WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EFFCWGQNK-YGQLGLGI-----DCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +G+ F WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A++++G+ + WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGL 171
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGIDYKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + +G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 104/199 (52%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIACLSYGSGPHIV 88
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++ ++A G YHSL LT DG+
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGE 148
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V +IACG S AV G++Y+WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYN 208
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 209 GNGQLGL-GSSGNQPTPCR 226
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG +M + G
Sbjct: 148 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 201 EVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 261 SYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + + V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ RI + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + +IA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + + V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ RI + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + +IA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH+ T ++ P + L VT +ACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + AV+CG T+ L ++GQ++ WG +S+ +LG +G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG Q Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ +A G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + +ACG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + Q+A G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 104/199 (52%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIACLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++ ++A G YHSL LT DG+
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V +IACG S AV G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYN 232
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 233 GNGQLGL-GSSGNQPTPCR 250
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG +M + G
Sbjct: 172 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 225 EVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 285 SYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWGQCRGQSVIL 344
Query: 178 PGL 180
P L
Sbjct: 345 PHL 347
>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
Length = 527
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y WG + G++G G N+ + S ++ V ++CG +M + + G+
Sbjct: 148 EVYAWGYNNS-GQVG--SGSTANQPTPRRVSSCLQ--NKVVVNIACGQLCSMAVLDNGET 202
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG N N +LG G+ P + L + IIQ+A G H+LALTD+G V+SWG +
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSWGANSY 262
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG NQ VP +I + V AC S TSAA T+ G++ MWG + + P
Sbjct: 263 GQLGTGNKSNQAVPTLINMDKERMVEVAACHTSHTSAAKTQSGQVLMWGQCRGQAVAYPH 322
Query: 180 L 180
L
Sbjct: 323 L 323
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++ G + G LGLG + E + I K + + G ++ T +G++
Sbjct: 42 EVFALGTN-CSGCLGLGDTQSTIEPRRIDILCGKKIISLSYGT----GPHVVIATADGEV 96
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N +LG G G P L+ NL+ R+ +++ G +H++ALT DG+V++WGY
Sbjct: 97 YAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNN 156
Query: 120 HGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G T NQ P V L ++ V +IACG S AV + G+ Y WG + QLG+
Sbjct: 157 SGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGL 215
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T +++ G N + LG GD +P+ + L +II ++ G G H + T DG
Sbjct: 35 IYVTVNDEVFALGTNCSGCLGLGDTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATADG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+V++WG+ G+ QLG+ T + P ++ L + VT ++CG + A+T G++Y WG
Sbjct: 95 EVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNSGQVG-SGSTANQPTP 171
>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
Length = 953
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 53 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 106
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 107 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 166
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 167 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 224
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 34 VKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DRVGGWKPKLLPNLVDV 91
+K+L + + V+CG + ++ L++ +++ WG N +LG G D P+LL +L+ +
Sbjct: 27 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 86
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
+Q+A GG HS LT G +F WG GQLG + ++ VP ++++L + + +I CG
Sbjct: 87 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCG 146
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLG 176
+AA+T++G ++ +G QLG
Sbjct: 147 EDHTAALTKEGGVFTFGAGGYGQLG 171
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADE 143
+ +L D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 27 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 86
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 87 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 120
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 107 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 159
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + +IA G H+ A G+++S+G GG
Sbjct: 160 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 219
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 220 NGQLGTGSTSNRKSPFTVK 238
>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
porcellus]
Length = 1080
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 180 EVFCWGQNK-YGQLGLGI-----DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 233
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 234 IFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 293
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 294 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 351
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P +K+L + + CG T LT+EG +
Sbjct: 234 IFGWGRNKF-GQLGL------NDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGV 286
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 287 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 346
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 347 NGQLGTGSTSNRKSPFTVK 365
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 28/174 (16%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-----RGDRVGGWKPKL 84
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG RV K
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR-KSIF 133
Query: 85 LPNLVDVRIIQIANGGYHS---------LA----LTDDGKV-------FSWGYGGHGQLG 124
+P ++RI + LA L + G+V F WG +GQLG
Sbjct: 134 MPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAVSASEVFCWGQNKYGQLG 193
Query: 125 HSF-TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ Q P +I++L +A GG+ S +T G ++ WG K QLG+
Sbjct: 194 LGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 247
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLG 124
QLG
Sbjct: 115 QLG 117
>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
Length = 947
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 47 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 100
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 101 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 160
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 161 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 218
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 34 VKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DRVGGWKPKLLPNLVDV 91
+K+L + + V+CG + ++ L++ +++ WG N +LG G D P+LL +L+ +
Sbjct: 21 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 80
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
+Q+A GG HS LT G +F WG GQLG + ++ VP ++++L + + +I CG
Sbjct: 81 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCG 140
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLG 176
+AA+T++G ++ +G QLG
Sbjct: 141 EDHTAALTKEGGVFTFGAGGYGQLG 165
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADE 143
+ +L D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 21 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 80
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 81 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 114
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 101 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 153
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + +IA G H+ A G+++S+G GG
Sbjct: 154 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 213
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 214 NGQLGTGSTSNRKSPFTVK 232
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
Length = 4305
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 11/170 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSK---VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG + +S P + + V AV GG + LT +G++++WG +
Sbjct: 3120 GRLGLG------HSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGED 3173
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R+ P+L+ +L R+I IA G HS +T G +++WG G +G+LGH
Sbjct: 3174 GKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGEYGRLGHGDD 3233
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q VP ++EALA+ V +ACG + + A+T GK++ WG+ +LG
Sbjct: 3234 NIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLG 3283
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ + ++ + + A + GG + L+ +G++++WG + +LG G+RV +PKL+ L
Sbjct: 4028 TLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITAL 4087
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ IA GG HS LT G++++WG G +G+LGH +++Q +P ++EAL+ V +
Sbjct: 4088 SGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDV 4147
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4148 ACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4177
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 98/179 (54%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTM-VLTEEGQ 59
+++ WG ++ + LG +G + P+ PV +A GG T+ +++ +G+
Sbjct: 3058 KVFVWGLNDKDQ---LGGVKGSKVKVPVFSPALSALRPVHIA----GGSKTLFIVSHDGK 3110
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNL--VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
L+ G +N LG G P+ P L V VR + + +GG H+LALT DGKV+SWG
Sbjct: 3111 LFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGE 3170
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH + P +IE+LA E V IACG + SA VT +G LY WG + +LG
Sbjct: 3171 GEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGEYGRLG 3229
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+YTWG+ GRLG G ++ IP V+AL V V+CG T+ +T++
Sbjct: 4110 RIYTWGKGR-YGRLGHG------DSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDD 4162
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + L +R+I++ G S+AL G V++WG
Sbjct: 4163 DNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGK 4222
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH ++ + PM + + + + IA G A T+ G++Y WG+ + QLG
Sbjct: 4223 GDYHRLGHGSYEHVRRPMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLG 4281
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
LYTWG E GRLG G + +P V+AL V V+CG T+ LT
Sbjct: 3216 HLYTWGLGE-YGRLGHG------DDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTAC 3268
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG +LGRG G P + L + + Q+ G SLALT DG+V++WG
Sbjct: 3269 GKVFSWGDGDFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGK 3328
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++EAL V H+A G AVT + +++ WG+ Q G
Sbjct: 3329 GDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQG 3387
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 8/138 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G +IP V+ L + V V CG F++ LT +G+
Sbjct: 3270 KVFSWG-DGDFGKLGRG------GSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGE 3322
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W WG + LG G +P L+ L R+I +A G H LA+T + +V++WG
Sbjct: 3323 VWTWGKGDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDND 3382
Query: 120 HGQLGHSFTQNQKVPMVI 137
HGQ G+ T + P ++
Sbjct: 3383 HGQQGNGTTCVNRRPALV 3400
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG RG +E G +P ++ L + V V CG F++ L + G +
Sbjct: 4165 VWSWG-DGDYGKLG----RGGSE--GCKLPMRIDCLKGLRVIKVECGSQFSVALCQCGSV 4217
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P + + I+ IA G H +A TD G+V++WG
Sbjct: 4218 YTWGKGDYHRLGHGSYEHVRRPMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDE 4277
Query: 121 GQLGHSFTQNQKVPMVIEAL 140
GQLG T + P ++ AL
Sbjct: 4278 GQLGDGTTLAAQRPRLLMAL 4297
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 13/177 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LYTWGR +GRLG G +S + + VA + G T+ T EG +
Sbjct: 598 LYTWGRG-AQGRLGHGTIENCLTPQPVSFNAHNIERIIDVA-LGWGEGSTLCCTWEGAVQ 655
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+G E G P+ L L R+ ++ G + ALTD G+V++WG G
Sbjct: 656 VFGEG---EAG--------TPRALSALAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGY 704
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+LGH ++ K+P ++EAL + ++ G S A++ +G L++WG + +Q+ P
Sbjct: 705 RLGHGNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWGTHERTQISNP 761
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA- 97
+ + ++C ++LT +G ++ ++ P L+P L I Q++
Sbjct: 483 IRIQQIACAEKLALLLTHDGAVYTLPYDT------------MTPHLVPGLESKTITQVSC 530
Query: 98 -NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
+ G H L + G +SWG G G+LGH T + P + LA V +A G + SA
Sbjct: 531 HSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAAGLACSA 590
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
+T +G LY WG +LG
Sbjct: 591 VITSRGALYTWGRGAQGRLG 610
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 21 GPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGG 79
G EAG P + AL + V V G + LT+ GQ++ WG Y LG G+
Sbjct: 658 GEGEAG---TPRALSALAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGYRLGHGNMEST 714
Query: 80 WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
PKL+ L ++I+ ++ G H +AL+ +G +F WG Q+ + Q K
Sbjct: 715 KIPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWGTHERTQISNPVPQPVK 767
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 47/183 (25%)
Query: 41 VAAVSCG--GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
+ VSC G + + G W+WG + LG GD P+ L +L ++++A
Sbjct: 525 ITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAA 584
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN----QKV--------------------- 133
G S +T G +++WG G G+LGH +N Q V
Sbjct: 585 GLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGEGS 644
Query: 134 --------------------PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
P + ALA VT + G AA+T+ G++Y WG
Sbjct: 645 TLCCTWEGAVQVFGEGEAGTPRALSALAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGY 704
Query: 174 QLG 176
+LG
Sbjct: 705 RLG 707
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG + P L + +Q+ G A+T DGKV++ GYG
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYGA 4012
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG + P ++ ++ F+T +AC GG A++ G++Y WG +D +LG
Sbjct: 4013 GGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLG 4071
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 33/70 (47%)
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
D KVF WG QLG KVP+ AL+ HIA G T V+ GKL+
Sbjct: 3055 DCPKVFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHIAGGSKTLFIVSHDGKLFAC 3114
Query: 168 GNAKDSQLGV 177
G + +LG+
Sbjct: 3115 GEGTNGRLGL 3124
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGIDYKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + +G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
Length = 963
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ +G+LG+G S P V+ L VP+ +S G +M L+ G
Sbjct: 172 ELFAWGQN-LDGQLGVG-----RIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGN 225
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P + L D ++ +A GG H+ LT G VF++G G
Sbjct: 226 VYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGSHTALLTKSGLVFTFGDGK 285
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ K+ QLG
Sbjct: 286 YGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHTLAYVSDMGKVFSFGSGKEGQLG 343
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N + +LG G P+++ NL V ++QI+ G
Sbjct: 154 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAG 213
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ G V+SWG GQLG T N+ P IEAL D+ V +ACGGS +A +T
Sbjct: 214 EAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGSHTALLT 273
Query: 160 EKGKLYMWGNAKDSQLGVPGLP-VVQPCPV 188
+ G ++ +G+ K QLG ++PC V
Sbjct: 274 KSGLVFTFGDGKYGQLGHNSTQNELRPCLV 303
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WGR++ G+LGLG + PS ++AL V ++CGG T +LT+ G +
Sbjct: 226 VYSWGRNDC-GQLGLGHTYNKDS------PSCIEALDDQKVEFLACGGSHTALLTKSGLV 278
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA-LTDDGKVFSWGYGG 119
+ +G +LG +P L+ LV R+ QIA G H+LA ++D GKVFS+G G
Sbjct: 279 FTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHTLAYVSDMGKVFSFGSGK 338
Query: 120 HGQLGHSFTQNQKVP 134
GQLG+ T NQ +P
Sbjct: 339 EGQLGNGGTCNQLMP 353
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVT 146
L + IIQI G YHSLAL+ G++F+WG GQLG + P ++E L+ +
Sbjct: 149 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLV 208
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
I+ G + S A++ G +Y WG QLG+
Sbjct: 209 QISAGEAHSMALSMSGNVYSWGRNDCGQLGL 239
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
G KPK + ++I + G H L L+ DGK F + Y + H+ Q
Sbjct: 99 GARKPKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYS----IEHARFQC------- 147
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L ++ + I CG S A+++ G+L+ WG D QLGV
Sbjct: 148 -ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGV 186
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 100/182 (54%), Gaps = 11/182 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVL-TEEGQLWNWGANSNY 69
G LGLG + E P ++++L +A +S G +VL T EG+++ WG N+
Sbjct: 5 GCLGLGDVQSTIE------PRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 58
Query: 70 ELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G G P + NL + ++ ++A G YHSL LT DG+VF+WGY GQ+G T
Sbjct: 59 QLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST 118
Query: 129 QNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
NQ +P V L ++ V +IACG S AV G++Y+WG + QLG+ G QP P
Sbjct: 119 ANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGL-GSSGNQPTP 177
Query: 188 VE 189
Sbjct: 178 CR 179
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG +M + G
Sbjct: 101 EVFAWGYNN-SGQVGSG------STANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTG 153
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 154 EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 213
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 214 SYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTL 273
Query: 178 PGL 180
P L
Sbjct: 274 PHL 276
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 17/194 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ +WGR++ G+LGLG +P K++A VP+ V+ G T +TE+G+
Sbjct: 139 QVQSWGRNQ-NGQLGLGTTEDS------LVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGE 191
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYHSLALTDDGKVFSW 115
L+ WG LG GDR K +L+P V + +++ +A G H+++++ G ++++
Sbjct: 192 LYGWGWGRYGNLGLGDR----KDRLVPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTY 247
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G+ +GQLGH + +P +EAL F++ I+ G + AVT GKLY WG K Q+
Sbjct: 248 GWSKYGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQV 307
Query: 176 GVPGLPVVQPCPVE 189
GV G V + PV+
Sbjct: 308 GV-GDNVDRSSPVQ 320
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GRLG G + L P ++ L + + ++CG + +T EGQ
Sbjct: 87 DVYSWGWGD-FGRLGHG------NSSDLFTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQ 139
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G P+ + V I +A G H+ A+T+DG+++ WG+G
Sbjct: 140 VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGR 199
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG +++ VP + E + +ACG + +V+ G LY +G +K QLG
Sbjct: 200 YGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLG 256
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 93/176 (52%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE-EGQLW 61
TWGR E +G+LG G +A P+ + L + + +V CG T+ +E ++
Sbjct: 37 TWGRGE-DGQLGHG------DAQDRLSPTILSTLEGLEIISVICGADHTIAYSESHTDVY 89
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P+ + L ++I QIA G H LA+T +G+V SWG +G
Sbjct: 90 SWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNG 149
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+A + +A G +AAVTE G+LY WG + LG+
Sbjct: 150 QLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGL 205
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 6/176 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELY WG G LGLG + +S+P K + V+CG T+ ++ G L
Sbjct: 191 ELYGWGWGR-YGNLGLGDRKDRLVPEKVSLPHGEK-----MVMVACGWRHTISVSSSGGL 244
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ +G + +LG GD P L L I QI+ G H++A+T DGK++ WG+
Sbjct: 245 YTYGWSKYGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKF 304
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G ++ P+ ++ ++ V I+CG + AVTE+ ++ WG + QLG
Sbjct: 305 GQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLG 360
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 32 SKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV 91
S+V A V +S G ++ L + WG + +LG GD P +L L +
Sbjct: 7 SEVTAPVRRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGL 66
Query: 92 RIIQIANGGYHSLALTDD-GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
II + G H++A ++ V+SWG+G G+LGH + + P I L + IAC
Sbjct: 67 EIISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIAC 126
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G S AVT +G++ WG ++ QLG+
Sbjct: 127 GDSHCLAVTMEGQVQSWGRNQNGQLGL 153
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 30 IPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
IP +++AL ++ +S G TM +T +G+L+ WG N ++G GD V P +
Sbjct: 265 IPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLP 324
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
++ ++I I+ G H+LA+T+ VFSWG G +GQLG+ ++ VP++I+AL+ +
Sbjct: 325 LEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIKALSVDG---- 380
Query: 149 ACGGSTSAAVTEKGKLYMW 167
+CG +++ + W
Sbjct: 381 SCGQHIESSMVDSSSGKTW 399
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
Length = 870
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 31 EVFCWGQNK-YGQLGLGI-----DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 84
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 85 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 144
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 145 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 202
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 34 VKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DRVGGWKPKLLPNLVDV 91
+K+L + + V+CG + ++ L++ +++ WG N +LG G D P+L+ +L+ +
Sbjct: 5 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI 64
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
+Q+A GG HS LT G +F WG GQLG + ++ VP ++++L + + +I CG
Sbjct: 65 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCG 124
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLG 176
+AA+T++G ++ +G QLG
Sbjct: 125 EDHTAALTKEGGVFTFGAGGYGQLG 149
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADE 143
+ +L D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 5 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI 64
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 65 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 98
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 85 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 137
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 138 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 197
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 198 NGQLGTGSTSNRKSPFTVK 216
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT +ACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ+++WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 11/179 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+ WG + G+LGLG G +E L P K V V CG T+ + ++G +
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLE-PRKSDFFANKKVRDVGCGLRHTVFVLDDGTV 55
Query: 61 WNWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V+SWG
Sbjct: 56 YTCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDS 112
Query: 120 HGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 113 DGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + Q+A G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ + ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLG 120
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 96/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPV-AAVSCGGFFTMVLTEEGQ 59
+L++WG + EG+LGL + E P VK L + ++CG + LT G+
Sbjct: 152 QLFSWGSN-SEGQLGLN-SKNFMECS----PRMVKTLGTSIIVQIACGMKHALALTNNGE 205
Query: 60 LWNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L++WG+NS +LG G D KPKL+ L V I IA GGYHS+A++ G +F WG
Sbjct: 206 LYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKN 265
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG + TQN+ +P ++ L + V + ACG S +T G ++ G QLG
Sbjct: 266 TFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLG 323
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + EG+LGLG + P + L VP+A ++CGG+ ++ +++ G
Sbjct: 205 ELYSWGSN-SEGQLGLGV-----DIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGA 258
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + ++ A G S+ LT DG VF+ G G
Sbjct: 259 IFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGM 318
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH N+ +P + L VT I+CG T A V +G++Y WG QLG
Sbjct: 319 YGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 376
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y+ G ++ G+LG GR L + + A AA CG + T+ + E GQL
Sbjct: 102 KIYSCGNNDY-GQLGHEQGRK-----RLQLILGLDAFVFKKAA--CGAYHTIAVNEWGQL 153
Query: 61 WNWGANSNYELGRGDR-VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG+NS +LG + P+++ L I+QIA G H+LALT++G+++SWG
Sbjct: 154 FSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNS 213
Query: 120 HGQLGHSF-TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + + P +I LA + IACGG S A+++ G ++ WG QLG+
Sbjct: 214 EGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGL 272
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+++ WG + G LGLG E + +P +V + ++CG +T+V+T +G+
Sbjct: 48 DMFCWG-NTRHGELGLGGI----EDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGK 102
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++ G N +LG G + +L+ L + A G YH++A+ + G++FSWG
Sbjct: 103 IYSCGNNDYGQLGHEQ--GRKRLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGSNS 160
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +S + P +++ L + IACG + A+T G+LY WG+ + QLG+
Sbjct: 161 EGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQLGL 219
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL N+ ++P +++ L V +CG F++ LT +G +
Sbjct: 259 IFGWGKNTF-GQLGL------NDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGV 311
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA +LG G P+ + L+ + QI+ G H+LAL G+V++WG GG
Sbjct: 312 FTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGG 371
Query: 120 HGQLGHSFTQNQKVPMVIE 138
GQLG++ T++ P V+
Sbjct: 372 AGQLGNNSTRSTTTPQVVR 390
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPK--LLPNLVDVR----IIQIANGGYHSLALT 107
L ++ ++ WG + ELG +GG + + L+P VD + I QIA G +++ +T
Sbjct: 43 LLKKEDMFCWGNTRHGELG----LGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVIT 98
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
DGK++S G +GQLGH Q +K +I L ACG + AV E G+L+ W
Sbjct: 99 HDGKIYSCGNNDYGQLGHE--QGRKRLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSW 156
Query: 168 GNAKDSQLGVPGLPVVQPCP 187
G+ + QLG+ ++ P
Sbjct: 157 GSNSEGQLGLNSKNFMECSP 176
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT +ACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ+++WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 11/179 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+ WG + G+LGLG G +E L P K V V CG T+ + ++G +
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLE-PRKSDFFANKKVRDVGCGLRHTVFVLDDGTV 55
Query: 61 WNWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V+SWG
Sbjct: 56 YTCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDS 112
Query: 120 HGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 113 DGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + Q+A G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ + ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLG 120
>gi|349605413|gb|AEQ00660.1| putative E3 ubiquitin-protein ligase HERC4-like protein, partial
[Equus caballus]
Length = 911
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + P +K+L +P V+ GG + VLT G
Sbjct: 18 EVFCWGQNK-YGQLGLGIDYKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 71
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 72 IFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 131
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 132 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 189
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYH 102
V+CG + ++ L++ +++ WG N +LG G D P+L+ +L+ + +Q+A GG H
Sbjct: 3 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAH 62
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
S LT G +F WG GQLG + ++ P ++++L + + +I CG +AA+T++G
Sbjct: 63 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEG 122
Query: 163 KLYMWGNAKDSQLG 176
++ +G QLG
Sbjct: 123 GVFTFGAGGYGQLG 136
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ P+ +K+L + + CG T LT+EG +
Sbjct: 72 IFGWGRNKF-GQLGL------NDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 124
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 125 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 184
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 185 NGQLGTGSTSNRKSPFTVK 203
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTHIACGG 152
+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L +A GG
Sbjct: 1 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGG 60
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ S +T G ++ WG K QLG+
Sbjct: 61 AHSFVLTLSGAIFGWGRNKFGQLGL 85
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P ++ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IA GG+ S +T G ++ WG K QLG+
Sbjct: 195 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 98/176 (55%), Gaps = 8/176 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG + GRLG G + L +P +KAL + + ++CG + +T +G++
Sbjct: 79 IYSWGWGD-FGRLGHG------NSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEV 131
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG N N +LG GD P L V + +A G H+ A+TD GK++ WG+G +
Sbjct: 132 YSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRY 191
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G LG ++ +P + A+ DE + +ACG + AV++ GKLY +G +K QLG
Sbjct: 192 GNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLG 247
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 99/177 (55%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WGR++ G+LGLG + +P K+ A V V ++ G T +T+ G+
Sbjct: 130 EVYSWGRNQ-NGQLGLG------DTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGK 182
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P +P + D ++ +A G H++A++ GK++++G+
Sbjct: 183 LYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSK 242
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH + +P + ALA+ +T ++ G + A+TE GKLY WG K Q+G
Sbjct: 243 YGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVG 299
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + G +P++V A+ + V+CG T+ +++ G+
Sbjct: 182 KLYGWGWGR-YGNLGLG------DRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGK 234
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P + L + I Q++ G H++ALT+ GK++ WG+
Sbjct: 235 LYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNK 294
Query: 120 HGQLGHSFTQNQKVPMVIEALAD-EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G + P +I + V ++CG + AVT+K +Y WG QLG
Sbjct: 295 FGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLG 352
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEG-QLW 61
++GR E +G+LG G +A +P + AL ++ V+CG T + ++
Sbjct: 28 SFGRGE-DGQLGHG------DAEDRHLPRIIGALNDCEISLVACGADHTTAYSATRLTIY 80
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P + L + I QIA G H LA+T DG+V+SWG +G
Sbjct: 81 SWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNG 140
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T + VP + A V +A G +AAVT+ GKLY WG + LG+
Sbjct: 141 QLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGL 196
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V VS G T+ L + ++G + +LG GD P+++ L D I +A G
Sbjct: 7 VLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGA 66
Query: 101 YHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
H+ A + ++SWG+G G+LGH + + VP I+AL + IACG S AVT
Sbjct: 67 DHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVT 126
Query: 160 EKGKLYMWGNAKDSQLGV 177
G++Y WG ++ QLG+
Sbjct: 127 ADGEVYSWGRNQNGQLGL 144
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 17/147 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LYT+G + G+LG G + +P +V AL + VS G T+ LTE G+
Sbjct: 234 KLYTYGWSK-YGQLGHG------DYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGK 286
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV-----RIIQIANGGYHSLALTDDGKVFS 114
L+ WG N ++G GD P L+ + R++Q++ G H++A+TD V+S
Sbjct: 287 LYGWGWNKFGQVGSGDV----DDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYS 342
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALA 141
WG G GQLGH ++ P I+AL+
Sbjct: 343 WGRGTSGQLGHGDAVDRSAPKGIQALS 369
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
+++ ++ G H++AL V S+G G GQLGH +++ +P +I AL D ++ +ACG
Sbjct: 6 KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACG 65
Query: 152 GS-TSAAVTEKGKLYMWGNAKDSQLG 176
T+A + +Y WG +LG
Sbjct: 66 ADHTTAYSATRLTIYSWGWGDFGRLG 91
>gi|22795248|gb|AAN08220.1| putative chromosome condensation regulator [Oryza sativa Japonica
Group]
gi|108709680|gb|ABF97475.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
Length = 505
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 26/202 (12%)
Query: 1 ELYTWGRDEGEG--RLGLGPGRGPNEAGGLSIPSKV----------KALPVPVA-AVSCG 47
L+ WG+++G RL G PN A G + S + + L + V VSCG
Sbjct: 141 RLWVWGQNQGSDYPRLFWG-AFAPNTASGATEQSTITCASSQFLSLRCLSLEVIHQVSCG 199
Query: 48 GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN----LVD-----VRIIQIAN 98
M L+E+G L WG N +LGRG G + + N +D V+I++++
Sbjct: 200 AVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPELVKIVRVSC 259
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN---QKVPMVIEALADEFVTHIACGGSTS 155
G YH+ A++++G+V++WG G GQLGH Q+ + +P + AL + ++CGG S
Sbjct: 260 GEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGGVHS 319
Query: 156 AAVTEKGKLYMWGNAKDSQLGV 177
AVTE G LY WG QLG+
Sbjct: 320 CAVTEDGALYAWGGGHVGQLGL 341
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNLV-------DVRIIQIAN 98
GG + + ++ WG N + + R G PK LP + ++R I +A
Sbjct: 8 GGLRVAGVPTKSAIYLWGYNHSGQTARKGKECHLRIPKSLPPKLFKWQDGKNLRWIDVAC 67
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H+ A+ DG +++WG GQLG ++ K P ++AL EFV ++CG +AAV
Sbjct: 68 GRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSVSCGAHCTAAV 127
Query: 159 TE---------KGKLYMWGNAKDS 173
E + +L++WG + S
Sbjct: 128 AEPRENNGTISRSRLWVWGQNQGS 151
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAA-VSCGGFFTMVLTEEG 58
E+YTWG G+LG G E IP +V AL V VSCGG + +TE+G
Sbjct: 272 EVYTWGLGS-MGQLGHCSLQSGDKEL----IPRRVVALDRTVIRDVSCGGVHSCAVTEDG 326
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKL---------LPNLVDVRIIQIANGGY-HSLALTD 108
L+ WG +LG G + G + L +P LV +Q+ G+ H+L
Sbjct: 327 ALYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVIPSGVQLVTCGHSHTLVSMK 386
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
D +++ WGY +GQ + + P ++ E V +A GG SA +T+ L
Sbjct: 387 DSRIYGWGYNSYGQAANEKSTYAWFPSPVDWCVGE-VRRLAAGGGHSAVLTDACSL 441
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 63/160 (39%), Gaps = 27/160 (16%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
V+CG T + +G L+ WGAN +LG G +P+ + L + ++ G + +
Sbjct: 65 VACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSVSCGAHCT 124
Query: 104 LALTD---------DGKVFSWGYGGHGQLGHSF------------TQNQKVP------MV 136
A+ + +++ WG F T+ + +
Sbjct: 125 AAVAEPRENNGTISRSRLWVWGQNQGSDYPRLFWGAFAPNTASGATEQSTITCASSQFLS 184
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ L+ E + ++CG A++E G L WG + QLG
Sbjct: 185 LRCLSLEVIHQVSCGAVHVMALSEDGLLQAWGYNEYGQLG 224
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LG+G + E P ++ +L +A++S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGVGDIQSTIE------PRRLDSLTGKKIASLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T +G+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V +I+CG S AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 233 GNGQLGL-GSSGNQPTPCR 250
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V +SCG +M + + G
Sbjct: 172 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G++++WG
Sbjct: 225 EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 285 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 344
Query: 178 P 178
P
Sbjct: 345 P 345
>gi|443697240|gb|ELT97775.1| hypothetical protein CAPTEDRAFT_180059 [Capitella teleta]
Length = 453
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 91/178 (51%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG + G +LG G G P L + A++CG +M L+ EG++
Sbjct: 97 EVYSWGHN-GYCQLG----NGSTNQGPTPTPVTSSLLGKRITAIACGSHHSMALSSEGEI 151
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N+ ++G G P+ + + + I IA G S+A D G+VF WGY G
Sbjct: 152 FAWGQNNCGQVGSGTTSNQPTPRKVTACIGSKKCISIACGQTSSIAAFDTGEVFGWGYNG 211
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + L + F+T IACG + + +T++G LY WG QLG
Sbjct: 212 NGQLGLGNNINQPNPCRLVVLNNVFITQIACGYAHTLGLTDEGSLYAWGANSYGQLGT 269
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG++ G++G G P KV A +++CG ++ + G
Sbjct: 150 EIFAWGQNNC-GQVGSG------TTSNQPTPRKVTACIGSKKCISIACGQTSSIAAFDTG 202
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ + P L L +V I QIA G H+L LTD+G +++WG
Sbjct: 203 EVFGWGYNGNGQLGLGNNINQPNPCRLVVLNNVFITQIACGYAHTLGLTDEGSLYAWGAN 262
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P+ I FV A SAA+T+ GK++MWG + +
Sbjct: 263 SYGQLGTGNKANMISPVRIAVDLGRFVEIAATHYNHLSAALTQAGKVFMWGQCRGQSVTS 322
Query: 178 P 178
P
Sbjct: 323 P 323
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 11/193 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP--VAAVSCGGFFTMVLTEEG 58
E+Y+ G + G LGLG + GL P KV+ L V+ G + T G
Sbjct: 43 EVYSLGSN-CSGCLGLGS----DAMSGLE-PRKVEQLCKKNIVSFAYGSGPHVLATTNAG 96
Query: 59 QLWNWGANSNYELGRGDRVGGWKPK-LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++++WG N +LG G G P + +L+ RI IA G +HS+AL+ +G++F+WG
Sbjct: 97 EVYSWGHNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHHSMALSSEGEIFAWGQ 156
Query: 118 GGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G T NQ P + A + + IACG ++S A + G+++ WG + QLG
Sbjct: 157 NNCGQVGSGTTSNQPTPRKVTACIGSKKCISIACGQTSSIAAFDTGEVFGWGYNGNGQLG 216
Query: 177 VPGLPVVQPCPVE 189
+ G + QP P
Sbjct: 217 L-GNNINQPNPCR 228
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 4/139 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDD 109
+V+T + ++++ G+N + LG G D + G +P+ + L I+ A G G H LA T+
Sbjct: 36 IVITNDDEVYSLGSNCSGCLGLGSDAMSGLEPRKVEQLCKKNIVSFAYGSGPHVLATTNA 95
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G+V+SWG+ G+ QLG+ T P V +L + +T IACG S A++ +G+++ WG
Sbjct: 96 GEVYSWGHNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHHSMALSSEGEIFAWG 155
Query: 169 NAKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 156 QNNCGQVG-SGTTSNQPTP 173
>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
Length = 1378
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LGLG + P V+ L VP+ +S G +M L+ G
Sbjct: 914 ELFAWGQN-SHGQLGLGRIFPSSPT-----PQIVEHLAGVPLVQISAGEAHSMALSMTGN 967
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P LL L ++ +A GG H+ LT DG VF++G G
Sbjct: 968 VYSWGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGK 1027
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGHS T+++ P ++ L VT IACG T A V+E GK++ +G+ K+ QLG
Sbjct: 1028 YGQLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLG 1085
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G + + P K+KAL + + VSCG + ++ L+E+GQ
Sbjct: 117 RVFAWGAG-SEGQLGIGEFKERS-----FTPQKIKALAGIKIIQVSCGYYHSLALSEDGQ 170
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS+ +LG G V P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 171 VFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSN 230
Query: 119 GHGQLGHSFTQ---NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL S T+ + P+ + AL V +I+CG +A +T+ G +Y +G QL
Sbjct: 231 SAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQL 290
Query: 176 G 176
G
Sbjct: 291 G 291
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 93/168 (55%), Gaps = 3/168 (1%)
Query: 15 GLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR 73
L P E+ S P +++A + V VSCG ++ + +G+++ WGA S +LG
Sbjct: 72 ALLPALLREESAPSSKPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 131
Query: 74 GD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQ 131
G+ + + P+ + L ++IIQ++ G YHSLAL++DG+VFSWG HGQLG +Q
Sbjct: 132 GEFKERSFTPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQ 191
Query: 132 KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
P + +L + +A GG+ S A++ G + WG+ QL + G
Sbjct: 192 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSG 239
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Query: 58 GQLWNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
G+L+ WG NS+ +LG G R+ P+++ +L V ++QI+ G HS+AL+ G V+SW
Sbjct: 913 GELFAWGQNSHGQLGLG-RIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSW 971
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G GQLG T+++ P ++ AL + V +ACGGS +A +T+ G ++ +G K QL
Sbjct: 972 GKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQL 1031
Query: 176 GVPGL-PVVQPCPV 188
G ++PC V
Sbjct: 1032 GHSSTRDELRPCLV 1045
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 18/158 (11%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
+Y+WG+++ G+LGLG + PS ++AL V ++CGG T +LT++G +
Sbjct: 968 VYSWGKNDF-GQLGLGHTESKDS------PSLLRALDSQKVDFLACGGSHTALLTQDGLV 1020
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA +LG +P L+ L+ R+ QIA G +H+LA + GKVF++G G
Sbjct: 1021 FTFGAGKYGQLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGK 1080
Query: 120 HGQLGHSFTQNQ---------KVPMVIEALADEFVTHI 148
+GQLG+ T NQ ++P + EA ++ +
Sbjct: 1081 NGQLGNCGTHNQPNSYVNLRRRIPTLNEATVKRWIADV 1118
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 14/174 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG E + P +V++L +P+A V+ GG + L+ G
Sbjct: 170 QVFSWGKN-SHGQLGLG-----KEVPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGT 223
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L G V +KP + L + ++ I+ G H+ LT +G V+++G
Sbjct: 224 SFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFG 283
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGN 169
GQLGHS Q+ P +E + D V+ I CG T A V G++ +G+
Sbjct: 284 ANSSGQLGHS--AEQRGPQCVERI-DGLVSQIDCGSYHTLAYVYTTGQVVSFGH 334
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 100 GYHSLALTDD-----GKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGS 153
+H L L + G++F+WG HGQLG + P ++E LA + I+ G +
Sbjct: 898 AFHKLKLDEKKKFLCGELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEA 957
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGV 177
S A++ G +Y WG QLG+
Sbjct: 958 HSMALSMTGNVYSWGKNDFGQLGL 981
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT +ACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + AV+CG T+ L ++GQ++ WG +S+ +LG +G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG Q Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ +A G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + +ACG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + Q+A G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|328791212|ref|XP_391873.2| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
mellifera]
Length = 508
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 83/140 (59%), Gaps = 3/140 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL-PNLVDVRIIQIANGGYHSLALTDDG 110
+ LTE+G++++WG NS+ ELG G P L+ NL + II IA G +HSLALT +G
Sbjct: 66 LALTEDGKVYSWGHNSHCELGNISASQGLIPMLVTKNLCNEFIIDIACGSHHSLALTIEG 125
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
KV++WG Q+G S N+ PM + + L D+ V I+CG S+S VT+ G++Y WG
Sbjct: 126 KVYAWGENTSRQVGSSVNVNEGTPMKVNSTLTDKRVVCISCGQSSSMVVTDNGEIYSWGC 185
Query: 170 AKDSQLGVPGLP-VVQPCPV 188
+ QLG+ PC +
Sbjct: 186 NEVGQLGIGNYANHANPCKI 205
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+++T++ ++ G+N++ LG GD P+ + L I A G G H LALT+DG
Sbjct: 13 LIVTKDKMVYAIGSNTSGCLGTGDTYNTLYPRRVEELCGKDIKTFAYGKGPHVLALTEDG 72
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVI-EALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
KV+SWG+ H +LG+ +PM++ + L +EF+ IACG S A+T +GK+Y WG
Sbjct: 73 KVYSWGHNSHCELGNISASQGLIPMLVTKNLCNEFIIDIACGSHHSLALTIEGKVYAWGE 132
Query: 170 AKDSQLG 176
Q+G
Sbjct: 133 NTSRQVG 139
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANG 99
+ ++CG ++ LT EG+++ WG N++ ++G V P K+ L D R++ I+ G
Sbjct: 108 IIDIACGSHHSLALTIEGKVYAWGENTSRQVGSSVNVNEGTPMKVNSTLTDKRVVCISCG 167
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
S+ +TD+G+++SWG GQLG N P I L ++ V CG + A++
Sbjct: 168 QSSSMVVTDNGEIYSWGCNEVGQLGIGNYANHANPCKITTLIEKVV----CGYAHVLALS 223
Query: 160 EKGKLYMWGNAKDSQLGV 177
G LY+WG QLG+
Sbjct: 224 NTGVLYVWGGNYCGQLGL 241
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 11/183 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG + +G NE + + S + V +SCG +MV+T+ G++
Sbjct: 126 KVYAWGENTSRQ---VGSSVNVNEGTPMKVNSTLT--DKRVVCISCGQSSSMVVTDNGEI 180
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG N +LG G+ P + L++ ++ G H LAL++ G ++ WG
Sbjct: 181 YSWGCNEVGQLGIGNYANHANPCKITTLIE----KVVCGYAHVLALSNTGVLYVWGGNYC 236
Query: 121 GQLGHSFTQN--QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLG N V ++++ + + S A+ E+ +++MWG + +P
Sbjct: 237 GQLGLGMKTNICNPVQLIVQEMGRVLDIAASHYSHISIAMGERNQIFMWGECLGQSITIP 296
Query: 179 GLP 181
L
Sbjct: 297 MLT 299
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT +ACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + AV+CG T+ L ++GQ++ WG +S+ +LG +G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG Q Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ +A G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + +ACG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + Q+A G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT +ACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + AV+CG T+ L ++GQ++ WG +S+ +LG +G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG Q Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ +A G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + +ACG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + Q+A G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 67/241 (27%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNE------------AGGLSIPSKVKALP-VPVAAVSCG 47
ELYTWG ++ G+LG + N+ A G +P+KV++L + VSCG
Sbjct: 150 ELYTWG-NKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCG 208
Query: 48 GFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNLVDV--------------- 91
G FT+VLTE G+++++G + +LG + + G ++PK +P+L ++
Sbjct: 209 GQFTVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDLQNIINIDCGQQFSAAVSS 268
Query: 92 -----------------------------------RIIQIANGGYHSLALTDDGKVFSWG 116
+II I+ G AL+++GK+F+WG
Sbjct: 269 SGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWG 328
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
YG GQLGHS + P IE E + + CGG+ +A +T+ +LY++G + QLG
Sbjct: 329 YGNDGQLGHSNRNDLYAPKQIE--FKEKIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLG 386
Query: 177 V 177
+
Sbjct: 387 I 387
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 28/196 (14%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y WG G+LGL NE S P +V+ L + V +M L+++G++
Sbjct: 45 VYAWGYGNF-GQLGLA-----NENNQYS-PQEVEKLSDRNIIKVKANKSVSMALSQDGKV 97
Query: 61 WNWGANSNYELGRGD--RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG N LG D +P+L+ L +++I QI+ G +H A++ DG++++WG
Sbjct: 98 YTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNK 157
Query: 119 GHGQLGHSFTQ----------NQK--------VPMVIEALADEFVTHIACGGSTSAAVTE 160
HG+LGH Q NQ +P +++L ++CGG + +TE
Sbjct: 158 DHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTE 217
Query: 161 KGKLYMWGNAKDSQLG 176
G++Y +GN+ QLG
Sbjct: 218 NGEVYSFGNSMKGQLG 233
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 27/196 (13%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++YTWG+++G G LG N + P V+ L + + +SCG F ++++G+
Sbjct: 96 KVYTWGKNKG-GILGHYDITSFN----MIQPELVEKLENIQIKQISCGPFHMAAISQDGE 150
Query: 60 LWNWG-------------ANSNYELGRGDR-----VGGWKPKLLPNLVDVRIIQIANGGY 101
L+ WG ++ E+ RG++ G P + +L ++ Q++ GG
Sbjct: 151 LYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQ 210
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTE 160
++ LT++G+V+S+G GQLG+ + P I L + + +I CG SAAV+
Sbjct: 211 FTVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDLQN--IINIDCGQQFSAAVSS 268
Query: 161 KGKLYMWGNAKDSQLG 176
GK+Y WGN QLG
Sbjct: 269 SGKVYTWGNNDHGQLG 284
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++YTWG ++ G+LG N++ + P++V + +SCG F L+ EG+
Sbjct: 271 KVYTWGNND-HGQLG------NNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGK 323
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG ++ +LG +R + PK + +II++ GG H+ LT + +++ +G G
Sbjct: 324 LFTWGYGNDGQLGHSNRNDLYAPKQIE--FKEKIIKVDCGGTHTAFLTQNNQLYLFGRGN 381
Query: 120 HGQLG-----HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
GQLG S + P ++E V + CGG + A+TE
Sbjct: 382 EGQLGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAITE 427
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V++WGYG GQLG + NQ P +E L+D + + S S A+++ GK+Y WG K
Sbjct: 45 VYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNK 104
Query: 172 DSQLG---VPGLPVVQPCPVE 189
LG + ++QP VE
Sbjct: 105 GGILGHYDITSFNMIQPELVE 125
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG E + P +K+L +P A ++ GG + VLT G
Sbjct: 157 EVFSWGQNK-YGQLGLG-----YEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +++ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT I CG T+A V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 97/179 (54%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRG-PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+YT G ++ G+LG R P G L + + AVSCG T+ L ++GQ+
Sbjct: 55 VYTCGCND-LGQLGHEKARKRPEHVGALDAQN--------IVAVSCGEAHTLALNDKGQV 105
Query: 61 WNWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG ++ +LG G P+ + +L +++I+Q+A G YHSLAL+ +VFSWG
Sbjct: 106 YAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNK 165
Query: 120 HGQLGHSFT-QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG + + Q P VI++L IA GG+ S +T G ++ WG K QLG+
Sbjct: 166 YGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L L + V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G +P+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG T+ +VP I++L++ + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL 171
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ RI + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH + +K P + AL + + ++CG + + A+ +KG++Y WG A D QLG+PG
Sbjct: 64 GQLGHE--KARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPG 120
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L V + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QI G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGTTSNRKSPFTVK 342
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 99.8 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 17/188 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
ELYTWG ++ G+LG G LS+P +V P+ V CGG T+ +
Sbjct: 1142 ELYTWGSNQ-SGQLG----HGLEVNKTLSLPKRVDFFRGKSPIFMVECGGEHTIAVDSNY 1196
Query: 59 QLWNWGANSNYELGRGDR-VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+++WG++ +LG G + V +PK++ L +I IA G H++ L G++FS+GY
Sbjct: 1197 FVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGY 1256
Query: 118 GGHGQLGHSFTQNQKVPMVIEALA---------DEFVTHIACGGSTSAAVTEKGKLYMWG 168
G GQLG ++ +P IE A +T IACG S +E G++Y WG
Sbjct: 1257 GDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWG 1316
Query: 169 NAKDSQLG 176
K QLG
Sbjct: 1317 LGKQGQLG 1324
Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 40/210 (19%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV----------PVAAVSCGGFF 50
EL+++G + G+LG G N IP++++ + + ++CG
Sbjct: 1250 ELFSFGYGDF-GQLGTGSFHSKN------IPTRIEINAIMGGLQHHDGGKITQIACGFGH 1302
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++ +E G++++WG +LG KP+L+ L V +I+ G +H++A TD
Sbjct: 1303 SVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRGV--TKISCGHFHTVATTDLK 1360
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT----------- 159
V+SWG G H +LGHS +++ VP V++ + V+ + CG + + +T
Sbjct: 1361 NVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQD 1420
Query: 160 ----------EKGKLYMWGNAKDSQLGVPG 179
+Y WG+A+ +LG+ G
Sbjct: 1421 DEDEENMNGKSSSPIYAWGSAEHGKLGLGG 1450
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV-----RIIQIAN 98
VSCG V+T++G+L+ WG+N + +LG G V K LP VD I +
Sbjct: 1127 VSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVN--KTLSLPKRVDFFRGKSPIFMVEC 1184
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ-NQKVPMVIEALADEFVTHIACGGSTSAA 157
GG H++A+ + V+SWG GQLGH NQ P VIE L + + IA G + +
Sbjct: 1185 GGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIV 1244
Query: 158 VTEKGKLYMWGNAKDSQLG 176
+ + G+L+ +G QLG
Sbjct: 1245 LKKSGELFSFGYGDFGQLG 1263
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 34/202 (16%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG + +G+LG +S P ++ L V +SCG F T+ T+ +
Sbjct: 1311 EVYSWGLGK-QGQLG------HKVFENISKPRLIETLR-GVTKISCGHFHTVATTDLKNV 1362
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT----------DD- 109
++WG+ + +LG PK++ + + ++ G H++ +T DD
Sbjct: 1363 YSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDE 1422
Query: 110 ------GK----VFSWGYGGHGQLG-----HSFTQNQKVPMVIEALADEFVTHIACGGST 154
GK +++WG HG+LG S ++ +P I+ + + I+CG
Sbjct: 1423 DEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLNLIDISCGSDF 1482
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SA +T +Y+WG + Q+G
Sbjct: 1483 SAMITSNNAIYVWGCGRFGQIG 1504
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-----VT 146
+ I+++ G H +TDDG++++WG GQLGH N+ + + D F +
Sbjct: 1123 KAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSL--PKRVDFFRGKSPIF 1180
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ CGG + AV +Y WG+ K QLG
Sbjct: 1181 MVECGGEHTIAVDSNYFVYSWGSDKFGQLG 1210
Score = 37.4 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 34/163 (20%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLT----- 55
+Y+WG E + LG +E S+P V + V+ V CG TM +T
Sbjct: 1362 VYSWGSGE---HMKLGHSSDKDE----SVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDL 1414
Query: 56 ---------EEGQ-------LWNWGANSNYELGRG-DRVGGWKPKLLPNLV----DVRII 94
EE ++ WG+ + +LG G D + K +P + + +I
Sbjct: 1415 NNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLNLI 1474
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
I+ G S +T + ++ WG G GQ+G+ + VP I
Sbjct: 1475 DISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRI 1517
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P ++ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IA GG+ S +T G ++ WG K QLG+
Sbjct: 195 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG E +G+LG G L P +V+AL + V+CG + ++ +G+
Sbjct: 3181 KVFSWGEGE-DGKLGHG------NRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGE 3233
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD KPKL+ L R++Q+A G +LALT+DG VFSWG
Sbjct: 3234 LYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3293
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LG ++ P IE L+ V I CG S A+T G+++ WG +LG
Sbjct: 3294 GDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG 3352
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G + P +++ L + V + CG F++ LT G++
Sbjct: 3288 VFSWG-DGDFGKLGRGGSEGSD------TPHEIERLSGIGVIQIECGAQFSLALTRAGEV 3340
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP+ + L R+I +A G H LA+TD G+V++WG H
Sbjct: 3341 WTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDH 3400
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P ++ L D FV +ACG S S A
Sbjct: 3401 GQQGSGNTFVNKKPALVIGLDDVFVNRVACGSSHSIA 3437
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + A L P V AL V V+CG T+ LTE+
Sbjct: 3233 ELYTWGLGE-YGRLGHG-----DNATQLK-PKLVAALAGRRVVQVACGSRDAQTLALTED 3285
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L + +IQI G SLALT G+V++WG
Sbjct: 3286 GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGK 3345
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I L V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3346 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3404
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V AV+ GG + LT EG+++ WG + +LG G+RV +PKL+ +L + + IA
Sbjct: 4311 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIAC 4370
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSA 156
G HS A+T G+V +WG G +G+LGH +++Q P ++EAL IACG + +
Sbjct: 4371 GSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTL 4430
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
+T+ ++ WG+ +LG
Sbjct: 4431 CITDDDNVWSWGDGDYGKLG 4450
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 11/170 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG + +P ++ L V AV GG + LT +G++++WG +
Sbjct: 3137 GRLGLG------VTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED 3190
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R KP+ + L +I +A G HS A++ G++++WG G +G+LGH
Sbjct: 3191 GKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3250
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P ++ ALA V +ACG + + A+TE G ++ WG+ +LG
Sbjct: 3251 ATQLKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3300
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDD 109
++++EG+++ G +N LG G P LP L V+ + + +GG H+LALT D
Sbjct: 3120 FIVSQEGRVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLD 3179
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
GKVFSWG G G+LGH P +EAL + + +ACG S SAA++ +G+LY WG
Sbjct: 3180 GKVFSWGEGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGL 3239
Query: 170 AKDSQLG 176
+ +LG
Sbjct: 3240 GEYGRLG 3246
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 12/171 (7%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLW 61
Y+WG E + RLG G + ++P+K+ AL V +V CG ++ V+T G L
Sbjct: 653 YSWGAGE-DHRLGHG------DTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCGGNLL 705
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGG 119
WG + LG G+ P L+ L + ++ +A +G HSLALT +G VF+WG G
Sbjct: 706 TWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGD 765
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+G+LG+ P+++E+L V I G S A++ +G++Y WG A
Sbjct: 766 YGKLGNGNCNGSLQPILVESLPR--VQRIFAGSQYSVALSSEGQVYTWGKA 814
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT+ G +
Sbjct: 4438 VWSWG-DGDYGKLGRG------GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAV 4490
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L +II IA G H +A +D G+V++WG
Sbjct: 4491 YTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDE 4550
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++ AL + + + CG + + A++
Sbjct: 4551 GQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLALS 4589
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
++ TWG+ GR G LG G ++ P V+AL ++CG T+ +T+
Sbjct: 4383 QVLTWGK----GRYGRLGHGDSEDQLR----PKLVEALLGYRAIDIACGSGDAQTLCITD 4434
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + +I++ G S+ALT G V++WG
Sbjct: 4435 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWG 4494
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LGH + + P + AL + + IA G A ++ G++Y WG+ + QLG
Sbjct: 4495 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 4554
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 46 CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA 105
C G M + ++WGA ++ LG GD P + L + + G +S
Sbjct: 638 CEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAV 697
Query: 106 LTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGK 163
+T G + +WG G + +LGH + ++ +P ++ ALA+ V +A G + S A+T +G
Sbjct: 698 ITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGL 757
Query: 164 LYMWGNAKDSQLG 176
++ WG+ +LG
Sbjct: 758 VFAWGDGDYGKLG 770
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEG 58
L TWGR RLG G + +P+ V AL V A+ G ++ LT EG
Sbjct: 704 LLTWGRGT-YARLGHG------NSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEG 756
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG +LG G+ G +P L+ +L R+ +I G +S+AL+ +G+V++WG
Sbjct: 757 LVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRIFAGSQYSVALSSEGQVYTWGKA 814
Query: 119 ---GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GH QL Q VP ++ +L + + +A G + A++ G+++ WG D Q
Sbjct: 815 TCLGH-QLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGR-NDCQQ 872
Query: 176 GVPGLPVVQP 185
P +P
Sbjct: 873 VCPSSVSSEP 882
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 63 WGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N +LG +G +V P + +R I IA G ++ +G+VF+ G G +
Sbjct: 3079 WGLNDKEQLGGLKGSKVK--VPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGEGTN 3136
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T N +P + L V +A GG + A+T GK++ WG +D +LG
Sbjct: 3137 GRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 3194
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 60 LWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG N +LG G R+ P L +R +Q+A G A+T DGK+F+ GY
Sbjct: 4226 IYGWGHNHRGQLGGLEGSRIK--TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4283
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG + + +P ++ +L FV +A GG A+T +G++Y WG +D +L
Sbjct: 4284 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4343
Query: 176 G 176
G
Sbjct: 4344 G 4344
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 25/182 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG D G+LG G N G L P V++LP V + G +++ L+ EGQ++
Sbjct: 758 VFAWG-DGDYGKLGNG-----NCNGSLQ-PILVESLPR-VQRIFAGSQYSVALSSEGQVY 809
Query: 62 NWGANS--NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
WG + ++L G P+L+ +L RI+ +A G H LAL+ G+VF WG
Sbjct: 810 TWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRND 869
Query: 120 HGQLGHSFTQNQ---KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
Q+ S ++ + P+++ AL + IAC G+ +W + S G
Sbjct: 870 CQQVCPSSVSSEPLLRSPILV-ALPTLPASGIACTA---------GQSLIW--TQSSHQG 917
Query: 177 VP 178
VP
Sbjct: 918 VP 919
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG E + P +K+L +P A ++ GG + VLT G
Sbjct: 157 EVFSWGQNK-YGQLGLG-----YEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +++ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT I CG T+A V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 97/179 (54%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRG-PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+YT G ++ G+LG R P G L + + AVSCG T+ L ++GQ+
Sbjct: 55 VYTCGCND-LGQLGHEKARKRPEHVGALDAQN--------IVAVSCGEAHTLALNDKGQV 105
Query: 61 WNWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG ++ +LG G P+ + +L +++I+Q+A G YHSLAL+ +VFSWG
Sbjct: 106 YAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNK 165
Query: 120 HGQLGHSFT-QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG + + Q P VI++L IA GG+ S +T G ++ WG K QLG+
Sbjct: 166 YGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L L + V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG +P+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGHEK--ARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T+ +VP I++L++ + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL 171
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ RI + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH + +K P + AL + + ++CG + + A+ +KG++Y WG A D QLG+PG
Sbjct: 64 GQLGHE--KARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPG 120
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L V + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QI G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGTTSNRKSPFTVK 342
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P ++ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IA GG+ S +T G ++ WG K QLG+
Sbjct: 195 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 166 EVFCWGQNK-YGQLGLGI-----DCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 219
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 220 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 279
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT +ACG TSA V G++Y +G + QLG
Sbjct: 280 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 337
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + AV+CG T+ L ++GQ++ WG +S+ +LG +G P+ + +L
Sbjct: 84 PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 143
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG Q Q P +I++L
Sbjct: 144 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ 203
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 204 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 233
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 10 MLCWG-NASYGQLGLG---GIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 65
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ +A G H+LAL D G+V++WG
Sbjct: 66 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 122
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 123 GQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 180
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 13 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 72
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + +ACG + + A+ +KG++Y WG D QLG+ G
Sbjct: 73 GQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 129
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 220 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 272
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + Q+A G H+ A G+++S+G GG
Sbjct: 273 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 332
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 333 NGQLGTGSTSNRKSPFTVK 351
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 96/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPV-AAVSCGGFFTMVLTEEGQ 59
+L++WG + EG+LGL + E P VK L + V+CG + LT G+
Sbjct: 136 QLFSWGSN-SEGQLGLN-SKNFMECS----PRMVKTLGTSIIVQVACGMKHALALTNNGE 189
Query: 60 LWNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L++WG+NS +LG G D KPKL+ L V I IA GGYHS+A++ G +F WG
Sbjct: 190 LYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKN 249
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG + TQN+ +P ++ L + + + ACG S +T G ++ G QLG
Sbjct: 250 TFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLG 307
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + EG+LGLG + P + L VP+A ++CGG+ ++ +++ G
Sbjct: 189 ELYSWGSN-SEGQLGLGV-----DIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGA 242
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + +I A G S+ LT DG VF+ G G
Sbjct: 243 IFGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGM 302
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH N+ +P + L VT I+CG T A V +G++Y WG QLG
Sbjct: 303 YGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 360
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 80/136 (58%), Gaps = 2/136 (1%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR-VGGWKPKLLPNLVDVRIIQIANGGYH 102
V+CG + T+ + E GQL++WG+NS +LG + P+++ L I+Q+A G H
Sbjct: 121 VACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKH 180
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEK 161
+LALT++G+++SWG GQLG +V P +I LA + IACGG S A+++
Sbjct: 181 ALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKS 240
Query: 162 GKLYMWGNAKDSQLGV 177
G ++ WG QLG+
Sbjct: 241 GAIFGWGKNTFGQLGL 256
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+++ WG + G LGLG E + +P +V + ++CG +T+V+T +G+
Sbjct: 32 DMFCWG-NTRHGELGLGGI----EDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGK 86
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++ G N +LG G + +L+ L ++A G YH++A+ + G++FSWG
Sbjct: 87 IYSCGNNDYGQLGH--ERGRKRLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNS 144
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +S + P +++ L + +ACG + A+T G+LY WG+ + QLG+
Sbjct: 145 EGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGL 203
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 12/140 (8%)
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPK--LLPNLVDVR----IIQIANGGYHSLALT 107
L ++G ++ WG + ELG +GG + + L+P VD + I QIA G +++ +T
Sbjct: 27 LLKKGDMFCWGNTRHGELG----LGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVIT 82
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
DGK++S G +GQLGH + +K +I L +ACG + AV E G+L+ W
Sbjct: 83 HDGKIYSCGNNDYGQLGHE--RGRKRLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSW 140
Query: 168 GNAKDSQLGVPGLPVVQPCP 187
G+ + QLG+ ++ P
Sbjct: 141 GSNSEGQLGLNSKNFMECSP 160
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL N+ ++P +++ L + +CG F++ LT +G +
Sbjct: 243 IFGWGKNTF-GQLGL------NDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGV 295
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA +LG G P+ + L+ + QI+ G H+LAL G+V++WG GG
Sbjct: 296 FTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGG 355
Query: 120 HGQLGHSFTQNQKVPMVIE 138
GQLG++ T++ P V+
Sbjct: 356 AGQLGNNSTRSIPTPQVVH 374
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQ--KVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
+L G +F WG HG+LG +++ VP ++ + IACG + + +T G
Sbjct: 26 SLLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDG 85
Query: 163 KLYMWGNAKDSQLG 176
K+Y GN QLG
Sbjct: 86 KIYSCGNNDYGQLG 99
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P ++ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IA GG+ S +T G ++ WG K QLG+
Sbjct: 195 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG E + P +K+L +P A ++ GG + VLT G
Sbjct: 157 EVFSWGQNK-YGQLGLG-----YEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +++ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT I CG T+A V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 97/179 (54%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRG-PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+YT G ++ G+LG R P G L + + AVSCG T+ L ++GQ+
Sbjct: 55 VYTCGCND-LGQLGHEKARKRPEHVGALDAQN--------IVAVSCGEAHTLALNDKGQV 105
Query: 61 WNWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG ++ +LG G P+ + +L +++I+Q+A G YHSLAL+ +VFSWG
Sbjct: 106 YAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNK 165
Query: 120 HGQLGHSFT-QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG + + Q P VI++L IA GG+ S +T G ++ WG K QLG+
Sbjct: 166 YGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L L + V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG +P+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGHEK--ARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T+ +VP I++L++ + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL 171
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ RI + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH + +K P + AL + + ++CG + + A+ +KG++Y WG A D QLG+PG
Sbjct: 64 GQLGHE--KARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPG 120
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L V + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QI G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGTTSNRKSPFTVK 342
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P ++ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IA GG+ S +T G ++ WG K QLG+
Sbjct: 195 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Homo sapiens]
Length = 310
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLNGKKIACLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 233 GNGQLGL 239
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++TWG + +LG G G + V V+CG + ++VLT +G++
Sbjct: 119 EVFTWGHN-AYSQLG----NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII-QIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N++ ++G G V P+ + + +++ IA G +A+ D G+V+ WGY G
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 233
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG + NQ P + AL V +ACG + + +T++G++Y WG QLG
Sbjct: 234 NGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGT 291
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G N+ IP +V V ++CG M + + G
Sbjct: 172 EVFAWGYNN-SGQVG--SGSTVNQP----IPRRVTGCLQNKVVVTIACGQMCCMAVVDTG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 225 EVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADE 143
+GQLG NQ P + D
Sbjct: 285 SYGQLGTGNKSNQSYPTPVTVEKDR 309
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ T +++ G N LG GD +P+ L +L +I ++ G G H + T +G
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEG 118
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG+ + QLG+ T + VP I L+++ V +ACG S +T G+++ WG
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G V QP P
Sbjct: 179 NNSGQVG-SGSTVNQPIP 195
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIACLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYN 232
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 233 GNGQLGL 239
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 172 EVFAWGYNNS-GQVGSGSTINQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDS 223
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 343
Query: 177 VPGL 180
+P L
Sbjct: 344 LPHL 347
>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
Length = 396
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 98/176 (55%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y+ G G GRLGL R G P V V +++CGG ++L+ G+++
Sbjct: 6 VYSCGHGAG-GRLGLNDERARTAFTG---PLGTLQ-DVEVKSLACGGKHNLLLSRAGKVY 60
Query: 62 NWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+WG N + + G G + + W+P+ + L V+++QIA G HS+ALTD +VF+WG G H
Sbjct: 61 SWGYNDSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLH 120
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLGH + P +++ L + + I CG + A+T GK+ +G+A +LG
Sbjct: 121 GQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLG 176
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 19/188 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
E++TWGR GL G + + P VK L + ++ CG T +T G+
Sbjct: 111 EVFTWGR-------GLHGQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGK 163
Query: 60 LWNWGANSNYELGRGDRVGG-----WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
+ +G+ ++ +LG GD GG + P L +L IIQ G S+ L+ G+++S
Sbjct: 164 VLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYS 223
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADE------FVTHIACGGSTSAAVTEKGKLYMWG 168
GY +GQLG F + + + + E FV +++CG S S A++E G +Y WG
Sbjct: 224 VGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWG 283
Query: 169 NAKDSQLG 176
+ + LG
Sbjct: 284 SGINWALG 291
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 7/159 (4%)
Query: 26 GGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPK 83
G + +P ++K+L + + G F+M L+ GQL++ G +N +LG + V
Sbjct: 186 GNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNLP 245
Query: 84 LLPNLVDVR-----IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE 138
+ +V + ++ G HSLAL++DG V+SWG G + LGH T++ P ++
Sbjct: 246 YTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVA 305
Query: 139 ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L + ++ GG SAAV+ G++Y WG QLG
Sbjct: 306 MLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLGT 344
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V V VSCG ++ L+E+G +++WG+ N+ LG G + PK++ L + ++
Sbjct: 258 VFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAMLEADPCVSVSA 317
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLG-------HSFTQNQKVP--MVIEALAD--EFVTH 147
GGYHS A++ G++++WG GQLG HS Q++P ++++ D E
Sbjct: 318 GGYHSAAVSATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRLPTRVILKGSVDSSEMAMR 377
Query: 148 IACG 151
+ CG
Sbjct: 378 VGCG 381
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 31 PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P ++AL V V ++ G ++ LT+ +++ WG + +LG GD W P L+ L
Sbjct: 82 PRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGDVSDVWFPFLVKGLQ 141
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ-----NQKVPMVIEALADEF 144
I I G ++ A+T GKV +G G+LG+ N +P+ +++LA
Sbjct: 142 GKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKFT 201
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+ G + S ++ G+LY G A + QLG+P
Sbjct: 202 IIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIP 235
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 64 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIACLSYGSGPHIV 117
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 118 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 177
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P + L ++ V IACG AV + G++Y+WG
Sbjct: 178 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYN 237
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 238 GNGQLGL 244
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 177 EVFAWGYNNS-GQVGSGSTINQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDS 228
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 229 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 288
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 289 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 348
Query: 177 VPGL 180
+P L
Sbjct: 349 LPHL 352
>gi|255569912|ref|XP_002525919.1| Protein pim1, putative [Ricinus communis]
gi|223534748|gb|EEF36439.1| Protein pim1, putative [Ricinus communis]
Length = 478
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 90/154 (58%), Gaps = 12/154 (7%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLL---PNLVD- 90
AL + VSCG + L+E+G L WG N +LGRG G + P+++ +D
Sbjct: 164 ALNTIICQVSCGAVHVVALSEDGLLQAWGYNEYGQLGRGITCEGLQGPRVINAYAKFLDE 223
Query: 91 ----VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN---QKVPMVIEALADE 143
V+I +++ G YH+ A+++ G+V++WG G GQLGH+ Q+ + +P + AL
Sbjct: 224 APELVKITRVSCGEYHTAAISEKGEVYTWGLGSTGQLGHTSLQSGNKELLPRRVVALDGI 283
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+T +ACGG + AVT+KG LY WG ++ QLG+
Sbjct: 284 LITDVACGGVHTCAVTQKGALYAWGGSQFGQLGL 317
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 81/199 (40%), Gaps = 62/199 (31%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL--------------- 88
++CG T + +G L+ WGAN +LG G G PK + L
Sbjct: 67 IACGREHTAAVASDGSLFTWGANEFGQLGDGTEEGKKYPKKVKQLETEFVKSVSCGAHCT 126
Query: 89 --------------------------------------VDVRIIQIANGGYHSLALTDDG 110
++ I Q++ G H +AL++DG
Sbjct: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNYPRLFSGAFALNTIICQVSCGAVHVVALSEDG 186
Query: 111 KVFSWGYGGHGQLGHSFT-QNQKVPMVIEALA---DEF-----VTHIACGGSTSAAVTEK 161
+ +WGY +GQLG T + + P VI A A DE +T ++CG +AA++EK
Sbjct: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVINAYAKFLDEAPELVKITRVSCGEYHTAAISEK 246
Query: 162 GKLYMWGNAKDSQLGVPGL 180
G++Y WG QLG L
Sbjct: 247 GEVYTWGLGSTGQLGHTSL 265
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLL-------PNLVDVRIIQIANGGYH 102
+M L + ++ WG N N + GR + + PK L P + R + IA G H
Sbjct: 14 SMNLPTKSAIYVWGYNHNGQTGRKGKEQELRIPKQLSPELFGCPAGANARWLDIACGREH 73
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE-- 160
+ A+ DG +F+WG GQLG + +K P ++ L EFV ++CG +AA+ E
Sbjct: 74 TAAVASDGSLFTWGANEFGQLGDGTEEGKKYPKKVKQLETEFVKSVSCGAHCTAAIAEPR 133
Query: 161 -------KGKLYMWGNAKDS 173
+L++WG + S
Sbjct: 134 ENDGTISTSRLWVWGQNQGS 153
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK---PKLLPNLVDVRIIQ 95
V + VSCG + T ++E+G+++ WG S +LG G K P+ + L + I
Sbjct: 228 VKITRVSCGEYHTAAISEKGEVYTWGLGSTGQLGHTSLQSGNKELLPRRVVALDGILITD 287
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLG-------HSFTQNQKVPMVIEALADEF---V 145
+A GG H+ A+T G +++WG GQLG SF + + A F V
Sbjct: 288 VACGGVHTCAVTQKGALYAWGGSQFGQLGLGPQTGSFSFIPSDTESFLRNIPALVFPTGV 347
Query: 146 THIACGGSTSAAVTEKGKLYMWG 168
+ACG S + G+++ WG
Sbjct: 348 QLVACGHSHTLICLRDGRIHGWG 370
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+YTWG G+LG + N+ +P +V AL + + V+CGG T +T++G
Sbjct: 248 EVYTWGLGS-TGQLGHTSLQSGNKE---LLPRRVVALDGILITDVACGGVHTCAVTQKGA 303
Query: 60 LWNWGANSNYELGRGDRVGGWK---------PKLLPNLVDVRIIQ-IANGGYHSLALTDD 109
L+ WG + +LG G + G + + +P LV +Q +A G H+L D
Sbjct: 304 LYAWGGSQFGQLGLGPQTGSFSFIPSDTESFLRNIPALVFPTGVQLVACGHSHTLICLRD 363
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
G++ WGY +GQ + T P ++ E V +A GG SA +T+ L
Sbjct: 364 GRIHGWGYNSYGQAANEKTTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 417
>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
Length = 1003
Score = 99.8 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 21/193 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS-IPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
+++ WG EG+LG+G E +S +P+K+KAL + + VSCG + ++ L+E+G
Sbjct: 94 KVFAWGAGS-EGQLGIG------EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDG 146
Query: 59 QLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+++WG NS +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 147 HVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGS 206
Query: 118 GGHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
GQL G+ + P I AL + V +I+CG +A +TE+G+++ +G Q
Sbjct: 207 NRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQ 266
Query: 175 LGVPGLPVVQPCP 187
L QP P
Sbjct: 267 L--------QPSP 271
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/152 (34%), Positives = 90/152 (59%), Gaps = 3/152 (1%)
Query: 31 PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNL 88
P ++AL + V VSCG ++ + +G+++ WGA S +LG G+ + + P + L
Sbjct: 65 PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL 124
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTH 147
++IIQ++ G YHSLAL++DG VFSWG GQLG +++Q +P +++L +
Sbjct: 125 AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQ 184
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A GG+ S A++ G + WG+ + QL + G
Sbjct: 185 VAAGGTHSFALSLTGTSFGWGSNRSGQLALSG 216
Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 16/193 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WGR+ EG+LGLG + +IP KVK+L +P+A V+ GG + L+ G
Sbjct: 148 VFSWGRNS-EGQLGLG-----KNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTS 201
Query: 61 WNWGANSNYELG-RGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+ WG+N + +L G++V +KP + L ++ +I I+ G H+ LT++G+VF++G
Sbjct: 202 FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG 261
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLG 176
GQL S Q+ P +IE + V+ I C T A V G++ G
Sbjct: 262 NSSGQLQPSPRSGQRGPQLIEGIGGR-VSQIECASYHTIAYVYTTGQVVSLGRGPSHTSN 320
Query: 177 VPGLPVVQPCPVE 189
P Q P E
Sbjct: 321 ----PTHQEAPAE 329
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
Query: 25 AGGLSIPSKVKA--LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP 82
A G P ++KA + + + G +++L ++++ G NS +LG+ +P
Sbjct: 6 AAGSRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERP 65
Query: 83 KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALA 141
+ + L D+ + ++ G HS+A+ GKVF+WG G GQLG F + +P I+ALA
Sbjct: 66 EPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALA 125
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++CG S A++E G ++ WG + QLG+
Sbjct: 126 GIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL 161
>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
Length = 986
Score = 99.8 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG +P ++AL + V VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRRGAQRG-------ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L D++IIQ++ G YHSLAL+ D +VFSWG HGQ
Sbjct: 102 GSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--L 180
LG F +Q P + +L + +A GG+ S A++ G + WG+ QL + G +
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV 220
Query: 181 PVVQPCPV 188
PV P+
Sbjct: 221 PVQSNKPL 228
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 13/186 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G E +S P K+ L + + VSCG + ++ L+++ Q
Sbjct: 96 VFAWGAGS-EGQLGIG------EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQ 148
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSN 208
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G + P+ + AL + V +I+CG + +A +T+ GK++ +G+ + QL
Sbjct: 209 SAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Query: 176 GVPGLP 181
G P
Sbjct: 269 GYSPTP 274
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 99/175 (56%), Gaps = 12/175 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKNS-HGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR V KP + L ++ ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNA 170
GQLG+S T ++ P ++E + D V+ I CG T A V G++ +G+
Sbjct: 262 DNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVVSFGHG 315
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WGA+S EL R G +LL Q A+G HSL L + +V S G GQ
Sbjct: 5 WGADSR-ELQRRRTAGSPGAELL---------QAASGERHSLLLLTNHRVLSCGDNSRGQ 54
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
LG Q ++P I+AL V ++CG S AV KG+++ WG + QLG+
Sbjct: 55 LGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + P I L D + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
Full=HECT domain and RCC1-like domain-containing protein
6
gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
Length = 1022
Score = 99.8 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG +P ++AL + V VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRRGAQRG-------ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L D++IIQ++ G YHSLAL+ D +VFSWG HGQ
Sbjct: 102 GSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--L 180
LG F +Q P + +L + +A GG+ S A++ G + WG+ QL + G +
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV 220
Query: 181 PVVQPCPV 188
PV P+
Sbjct: 221 PVQSNKPL 228
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 13/186 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G E +S P K+ L + + VSCG + ++ L+++ Q
Sbjct: 96 VFAWGAGS-EGQLGIG------EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQ 148
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSN 208
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G + P+ + AL + V +I+CG + +A +T+ GK++ +G+ + QL
Sbjct: 209 SAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Query: 176 GVPGLP 181
G P
Sbjct: 269 GYSPTP 274
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 99/175 (56%), Gaps = 12/175 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKNS-HGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR V KP + L ++ ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNA 170
GQLG+S T ++ P ++E + D V+ I CG T A V G++ +G+
Sbjct: 262 DNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVVSFGHG 315
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WGA+S EL R G +LL Q A+G HSL L + +V S G GQ
Sbjct: 5 WGADSR-ELQRRRTAGSPGAELL---------QAASGERHSLLLLTNHRVLSCGDNSRGQ 54
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
LG Q ++P I+AL V ++CG S AV KG+++ WG + QLG+
Sbjct: 55 LGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + P I L D + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
Length = 1028
Score = 99.8 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG +P ++AL + V VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRRGAQRG-------ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L D++IIQ++ G YHSLAL+ D +VFSWG HGQ
Sbjct: 102 GSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--L 180
LG F +Q P + +L + +A GG+ S A++ G + WG+ QL + G +
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV 220
Query: 181 PVVQPCPV 188
PV P+
Sbjct: 221 PVQSNKPL 228
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 13/186 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G E +S P K+ L + + VSCG + ++ L+++ Q
Sbjct: 96 VFAWGAGS-EGQLGIG------EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQ 148
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSN 208
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G + P+ + AL + V +I+CG + +A +T+ GK++ +G+ + QL
Sbjct: 209 SAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Query: 176 GVPGLP 181
G P
Sbjct: 269 GYSPTP 274
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 99/175 (56%), Gaps = 12/175 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKNS-HGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR V KP + L ++ ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNA 170
GQLG+S T ++ P ++E + D V+ I CG T A V G++ +G+
Sbjct: 262 DNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVVSFGHG 315
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WGA+S EL R G +LL Q A+G HSL L + +V S G GQ
Sbjct: 5 WGADSR-ELQRRRTAGSPGAELL---------QAASGERHSLLLLTNHRVLSCGDNSRGQ 54
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
LG Q ++P I+AL V ++CG S AV KG+++ WG + QLG+
Sbjct: 55 LGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + P I L D + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
Length = 1626
Score = 99.8 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 11/192 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK---ALPVPVAAVSCGGFFTMVLTEE 57
+LYTWG G LG+GP + P+ V + V V V+CG ++ LT
Sbjct: 814 KLYTWGHSS-YGCLGVGP-----HMTKTATPNPVSWFVYIRVEVIQVACGRNHSIALTTN 867
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG+N +LG G R P L+ +L + I+ ++ G YHSLA++ G++++WG+
Sbjct: 868 G-VYSWGSNHYGQLGTGRRGQAPYPMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGW 926
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +GQLGH + + P ++++L +E + G S S +T GK++ +G+ QLG
Sbjct: 927 GVYGQLGHGAIDDCEKPKLLKSLENENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGN 986
Query: 178 -PGLPVVQPCPV 188
+ P PV
Sbjct: 987 GSTTKITSPVPV 998
Score = 86.7 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 61/172 (35%), Positives = 92/172 (53%), Gaps = 13/172 (7%)
Query: 2 LYTWGRDEGEGRLGLGP-GRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+Y+WG + G+LG G G+ P P V +L + +VS G + ++ ++ GQ
Sbjct: 869 VYSWGSNH-YGQLGTGRRGQAP-------YPMLVDSLSNELIVSVSAGQYHSLAISASGQ 920
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY-HSLALTDDGKVFSWGYG 118
LW WG +LG G KPKLL +L + II A GGY HS+ LT +GKVF++G G
Sbjct: 921 LWTWGWGVYGQLGHGAIDDCEKPKLLKSLENENIIS-AYGGYSHSIILTSNGKVFTFGSG 979
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
GQLG+ T P+ + L E + I + A+++ G+LY WG++
Sbjct: 980 SFGQLGNGSTTKITSPVPVYGLP-EPIKCIYTAYFHNLALSDVGRLYTWGSS 1030
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 83/209 (39%), Gaps = 46/209 (22%)
Query: 10 GEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWG---- 64
G G G LG G ++ P V LP P+ + F + L++ G+L+ WG
Sbjct: 977 GSGSFGQLGNG----STTKITSPVPVYGLPEPIKCIYTAYFHNLALSDVGRLYTWGSSPQ 1032
Query: 65 -----------ANSNYELGRGDRVGGWKPKLL----------PNLVDVR-----IIQIAN 98
A + L GD+ + L P LVD I Q+
Sbjct: 1033 VLRFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCC 1092
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI-----------EALADEFVTH 147
G +HS ++ G++++WG GQLG S + + VP V + + +
Sbjct: 1093 GCHHSAVISTTGQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVDSSSTSGSLIKE 1152
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ CG + A+ KL+ WG+ + QLG
Sbjct: 1153 VRCGADFTLALDAANKLWGWGSNHEGQLG 1181
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 15/83 (18%)
Query: 1 ELYTWGRDEGEGRLGLGPGR----------GPNEAGGLSIPSKVKALPVPVAAVSCGGFF 50
+LYTWG + +G+LG+ R GP I + V CG F
Sbjct: 1105 QLYTWGLNL-DGQLGVSGIRERLVPTVTLVGPPSV----IVDSSSTSGSLIKEVRCGADF 1159
Query: 51 TMVLTEEGQLWNWGANSNYELGR 73
T+ L +LW WG+N +LG+
Sbjct: 1160 TLALDAANKLWGWGSNHEGQLGK 1182
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGL-----DCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P ++++L
Sbjct: 135 ADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++LAD + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGL-----DCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + Q P ++++L
Sbjct: 135 ADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++LAD + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
>gi|222625331|gb|EEE59463.1| hypothetical protein OsJ_11655 [Oryza sativa Japonica Group]
Length = 581
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 26/202 (12%)
Query: 1 ELYTWGRDEGEG--RLGLGPGRGPNEAGGLSIPSKV----------KALPVPVA-AVSCG 47
L+ WG+++G RL G PN A G + S + + L + V VSCG
Sbjct: 217 RLWVWGQNQGSDYPRLFWG-AFAPNTASGATEQSTITCASSQFLSLRCLSLEVIHQVSCG 275
Query: 48 GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN----LVD-----VRIIQIAN 98
M L+E+G L WG N +LGRG G + + N +D V+I++++
Sbjct: 276 AVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPELVKIVRVSC 335
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN---QKVPMVIEALADEFVTHIACGGSTS 155
G YH+ A++++G+V++WG G GQLGH Q+ + +P + AL + ++CGG S
Sbjct: 336 GEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGGVHS 395
Query: 156 AAVTEKGKLYMWGNAKDSQLGV 177
AVTE G LY WG QLG+
Sbjct: 396 CAVTEDGALYAWGGGHVGQLGL 417
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNLV-------DVRIIQIAN 98
GG + + ++ WG N + + R G PK LP + ++R I +A
Sbjct: 84 GGLRVAGVPTKSAIYLWGYNHSGQTARKGKECHLRIPKSLPPKLFKWQDGKNLRWIDVAC 143
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H+ A+ DG +++WG GQLG ++ K P ++AL EFV ++CG +AAV
Sbjct: 144 GRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSVSCGAHCTAAV 203
Query: 159 TE---------KGKLYMWGNAKDS 173
E + +L++WG + S
Sbjct: 204 AEPRENNGTISRSRLWVWGQNQGS 227
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAA-VSCGGFFTMVLTEEG 58
E+YTWG G+LG G E IP +V AL V VSCGG + +TE+G
Sbjct: 348 EVYTWGLG-SMGQLGHCSLQSGDKEL----IPRRVVALDRTVIRDVSCGGVHSCAVTEDG 402
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKL---------LPNLVDVRIIQIANGGY-HSLALTD 108
L+ WG +LG G + G + L +P LV +Q+ G+ H+L
Sbjct: 403 ALYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVIPSGVQLVTCGHSHTLVSMK 462
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
D +++ WGY +GQ + + P ++ E V +A GG SA +T+ L
Sbjct: 463 DSRIYGWGYNSYGQAANEKSTYAWFPSPVDWCVGE-VRRLAAGGGHSAVLTDACSL 517
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 63/160 (39%), Gaps = 27/160 (16%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
V+CG T + +G L+ WGAN +LG G +P+ + L + ++ G + +
Sbjct: 141 VACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSVSCGAHCT 200
Query: 104 LALTD---------DGKVFSWGYGGHGQLGHSF------------TQNQKVP------MV 136
A+ + +++ WG F T+ + +
Sbjct: 201 AAVAEPRENNGTISRSRLWVWGQNQGSDYPRLFWGAFAPNTASGATEQSTITCASSQFLS 260
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ L+ E + ++CG A++E G L WG + QLG
Sbjct: 261 LRCLSLEVIHQVSCGAVHVMALSEDGLLQAWGYNEYGQLG 300
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 78/128 (60%), Gaps = 2/128 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDG 110
+V T EG+++ WG N+ +LG G P ++ NLV+ ++ ++A G +HS+ LT DG
Sbjct: 88 VVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDG 147
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+V++WGY GQ+G T NQ +P V L ++ +IACG S AV E G++Y+WG
Sbjct: 148 EVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGY 207
Query: 170 AKDSQLGV 177
+ QLG+
Sbjct: 208 NGNGQLGL 215
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 99/183 (54%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVPVAA-VSCGGFFTMVLTEEG 58
E+YTWG + G++G G N+A IP +V + L +A ++CG +M + E G
Sbjct: 148 EVYTWGYNNS-GQVG--SGSTANQA----IPRRVTSCLQNKIAVNIACGQMCSMAVVENG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G++++WG
Sbjct: 201 EVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P+ I D + AC TSAA T+ ++YMWG + + +
Sbjct: 261 SYGQLGTGNRSNQSYPVPITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWGQCRGQSITL 320
Query: 178 PGL 180
P L
Sbjct: 321 PYL 323
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 96/178 (53%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+YTWG + LG G N I + + + V V+CG +M+LT +G++
Sbjct: 95 EVYTWGHN---AYSQLGNGTTNNSLLPCQISTNL--VNKKVTEVACGSHHSMILTSDGEV 149
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI-IQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N++ ++G G P+ + + + +I + IA G S+A+ ++G+V+ WGY G
Sbjct: 150 YTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNG 209
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG + NQ P I AL V +ACG + + +T++G++Y WG QLG
Sbjct: 210 NGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGT 267
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 77 VGGWKPKLLPNLVDVRIIQIA----NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
VG W + ++++I+ A + G L +T++ +VF+ G G LG TQN
Sbjct: 4 VGKWPIFAFRSPEELKLIRQACVFGSAGNEVLYVTENNEVFALGTNCSGCLGVGDTQNSV 63
Query: 133 VPMVIEALADEFVTHIACGGSTSAAV-TEKGKLYMWGNAKDSQLG 176
P ++ L + +T ++ G V T +G++Y WG+ SQLG
Sbjct: 64 EPRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLG 108
>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
Length = 926
Score = 99.4 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 21/193 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS-IPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
+++ WG EG+LG+G E +S +P+K+KAL + + VSCG + ++ L+E+G
Sbjct: 94 KVFAWGAGS-EGQLGIG------EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDG 146
Query: 59 QLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+++WG NS +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 147 HVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGS 206
Query: 118 GGHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
GQL G+ + P I AL + V +I+CG +A +TE+G+++ +G Q
Sbjct: 207 NRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQ 266
Query: 175 LGVPGLPVVQPCP 187
L QP P
Sbjct: 267 L--------QPSP 271
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/152 (34%), Positives = 90/152 (59%), Gaps = 3/152 (1%)
Query: 31 PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNL 88
P ++AL + V VSCG ++ + +G+++ WGA S +LG G+ + + P + L
Sbjct: 65 PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL 124
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTH 147
++IIQ++ G YHSLAL++DG VFSWG GQLG +++Q +P +++L +
Sbjct: 125 AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQ 184
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A GG+ S A++ G + WG+ + QL + G
Sbjct: 185 VAAGGTHSFALSLTGTSFGWGSNRSGQLALSG 216
Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 16/193 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WGR+ EG+LGLG + +IP KVK+L +P+A V+ GG + L+ G
Sbjct: 148 VFSWGRNS-EGQLGLG-----KNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTS 201
Query: 61 WNWGANSNYELG-RGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+ WG+N + +L G++V +KP + L ++ +I I+ G H+ LT++G+VF++G
Sbjct: 202 FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG 261
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLG 176
GQL S Q+ P +IE + V+ I C T A V G++ G
Sbjct: 262 NSSGQLQPSPRSGQRGPQLIEGIGGR-VSQIECASYHTIAYVYTTGQVVSLGRGPSHTSN 320
Query: 177 VPGLPVVQPCPVE 189
P Q P E
Sbjct: 321 ----PTHQEAPAE 329
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
Query: 25 AGGLSIPSKVKA--LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP 82
A G P ++KA + + + G +++L ++++ G NS +LG+ +P
Sbjct: 6 AAGSRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERP 65
Query: 83 KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALA 141
+ + L D+ + ++ G HS+A+ GKVF+WG G GQLG F + +P I+ALA
Sbjct: 66 EPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALA 125
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++CG S A++E G ++ WG + QLG+
Sbjct: 126 GIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL 161
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 107/190 (56%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG + +P K++A +P+ V+ G T +TE+G
Sbjct: 140 EVQSWGRNQ-NGQLGLG------DTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGD 192
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + + ++ +A G H+++++ G ++++G+
Sbjct: 193 LYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK 252
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH ++ +P +EAL++ F++ I+ G + A+T GKLY WG K Q+GV G
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-G 311
Query: 180 LPVVQPCPVE 189
+ Q PV+
Sbjct: 312 NNLDQCSPVQ 321
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + GRLG G + L P +KAL + + ++CG + +T EG+
Sbjct: 88 EVYSWGWGD-FGRLGHG------NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 140
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG GD P+ + + I +A G H+ A+T+DG ++ WG+G
Sbjct: 141 VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGR 200
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + + E ++ +ACG + +V+ G LY +G +K QLG
Sbjct: 201 YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLG 257
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG-QLW 61
+WGR E +G+LG G +A P+++ AL + +V+CG T+ ++ G +++
Sbjct: 38 SWGRGE-DGQLGHG------DAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVY 90
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P + L +RI QIA G H LA+T +G+V SWG +G
Sbjct: 91 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNG 150
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+A + +A G +AAVTE G LY WG + LG+
Sbjct: 151 QLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 206
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Query: 33 KVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR 92
+V A P V +S G ++ L + +WG + +LG GD P L L +
Sbjct: 9 EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ 68
Query: 93 IIQIANGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
I+ + G H++A + G +V+SWG+G G+LGH + + P+ I+AL + IACG
Sbjct: 69 IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLGV 177
S AVT +G++ WG ++ QLG+
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGL 154
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
IP K++AL ++ +S G TM LT +G+L+ WG N ++G G+ + P +
Sbjct: 266 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 325
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
D +++Q++ G H+LA+T+ VF+WG G +GQLG + ++ P +IEAL+
Sbjct: 326 DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378
>gi|194391082|dbj|BAG60659.1| unnamed protein product [Homo sapiens]
Length = 281
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLNGKKIACLSYGSGPHIV 88
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 148
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG AV + G++Y+WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 208
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 209 GNGQLGL 215
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++TWG + G G G + V V+CG + ++VLT +G++
Sbjct: 95 EVFTWGHNAYSQL-----GNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 149
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII-QIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N++ ++G G V P+ + + +++ IA G +A+ D G+V+ WGY G
Sbjct: 150 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 209
Query: 120 HGQLGHSFTQNQKVPMVIEAL 140
+GQLG + NQ P + AL
Sbjct: 210 NGQLGLGNSGNQPTPCRVAAL 230
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 64 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLNGKKIACLSYGSGPHIV 117
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 118 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 177
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG AV + G++Y+WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 238 GNGQLGL 244
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 177 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 228
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 229 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 288
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 289 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 348
Query: 177 VPGL 180
+P L
Sbjct: 349 LPHL 352
>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
Length = 487
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 93/171 (54%), Gaps = 3/171 (1%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG + G+LG G +S P KVKAL V VSCG + T LT++ +
Sbjct: 112 ELYTWGCSKN-GKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKK 170
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
WG LG GD + PKL+ +L + I +I+ GG+H+ L GK++ +G G
Sbjct: 171 ALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGA 230
Query: 120 HGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G+LG T + +P ++E L D +T ++ G SAAVT+ GK+Y WG
Sbjct: 231 FGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQ 281
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
TWG LGL G + + P +++L +P+ +SCGG T +L G+L+
Sbjct: 173 TWG-------LGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYM 225
Query: 63 WGANSNYELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+G + +LG G P+LL L D++I +++ G HS A+T GKV++WG GG
Sbjct: 226 FGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGG-- 283
Query: 122 QLGHSFT---QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV- 177
+LGH F + P + L F+ I+CG S S A+++ G +Y WG K+ G+
Sbjct: 284 RLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKNIGHGIQ 343
Query: 178 ---PGLPVVQP 185
P +P P
Sbjct: 344 GIHPNMPSKHP 354
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW------KPKLLPNLVDVRII 94
V V+C T + G+L+ WG + N +LG G +P + L ++I
Sbjct: 94 VVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVI 153
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
Q++ G YH+ LTDD K +WG G G+LGH TQ+ P +IE+LA + I+CGG
Sbjct: 154 QVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHH 213
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
+A + GKLYM+G +LG
Sbjct: 214 TAILLVTGKLYMFGGGAFGKLG 235
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 86 PNLVD-----VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
P+LVD I +++ G +S A+T+ G + WGYGG GQLG ++ VP V +L
Sbjct: 32 PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ V +AC +AA+ G+LY WG +K+ +LG
Sbjct: 92 KN--VVQVACSDRHTAAILSNGELYTWGCSKNGKLG 125
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++YTWG+ G + GP E LS P ++ L + +SCG ++ L++ G
Sbjct: 275 KVYTWGQGGRLGHIFNGP-----EHDFLS-PKRLSNLEKAFIVDISCGNSHSVALSDVGD 328
Query: 60 LWNWGANSNYELGRGDRVGGWKPKL---LPNLVDVRIIQIANGGYHSLALTDDGKV 112
++ WG N +G G + G P + P L + I+Q+ HS+AL+D G +
Sbjct: 329 IYTWGMTKN--IGHG--IQGIHPNMPSKHPILQNKNIVQVVCSSSHSIALSDIGAL 380
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALAD-EFVTHIACGGSTSAAVTEKGKLYMWGNA 170
V WG +GQ G + P +++ L ++ ++CG + SAA+T G L +WG
Sbjct: 10 VVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69
Query: 171 KDSQLGVPGL 180
QLG L
Sbjct: 70 GCGQLGFGNL 79
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG M LT +G++++WG +
Sbjct: 2774 GRLGLGIS-----SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 2828
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS A+T G++++WG G +G+LGH
Sbjct: 2829 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 2888
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 2889 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 2938
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 2926 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2978
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 2979 WTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3038
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P +++ L + +T +ACG S S A
Sbjct: 3039 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3075
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2712 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2764
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L + V+ + + +GG H++ALT DGK+FSWG
Sbjct: 2765 VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWG 2824
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 2825 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG 2884
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 3788 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 3847
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ IA GG HS +T G +++WG G +G+LGH +++Q P ++EAL V IACG
Sbjct: 3848 VDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSG 3907
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 3908 DAQTLCLTDDDTVWSWGDGDYGKLG 3932
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 2871 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 2923
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 2924 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2983
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 2984 GDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3042
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+LYTWG+ GR G LG G ++ P V+AL V ++CG T+ LT+
Sbjct: 3865 DLYTWGK----GRYGRLGHGDSEDQLK----PKLVEALQGYRVIDIACGSGDAQTLCLTD 3916
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 3917 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 3976
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 3977 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4036
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 3920 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3972
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 3973 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4032
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + + +ACG + + A
Sbjct: 4033 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4069
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 30/159 (18%)
Query: 48 GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
F+++ GQ+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT
Sbjct: 402 AVFSLIF---GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALT 458
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE------------------ALADEFVTHIA 149
DG+V+SWG G + +LGH ++ + P ++E L + + IA
Sbjct: 459 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQATLPQANCLSKKXXXXLDTKHIVGIA 518
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPV 188
CG + S + W + + +G+ VV CP+
Sbjct: 519 CGPAQS---------FAWSSCSEWSIGLRVPFVVDVCPM 548
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R IQ+ G A+T DGK+++ GY
Sbjct: 3706 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYATGY 3765
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3766 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 3825
Query: 176 G 176
G
Sbjct: 3826 G 3826
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 410 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQ 462
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+++WG N LG G PKLL L
Sbjct: 463 VYSWGKGDNQRLGHGTEEHVRYPKLLEGL 491
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2695 LIRKKASGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2753
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 2754 KSLFAVTVEGKVYACGEATNGRLGL 2778
>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 4784
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 98/182 (53%), Gaps = 14/182 (7%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTE 56
+LY G EG GRLGLG + P +V L V AV GG M LT
Sbjct: 2960 KLYACG--EGTNGRLGLG------HNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTL 3011
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+G++++WG + +LG G+RV KPKLL +L RI IA G HS A+T G++++WG
Sbjct: 3012 DGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWG 3071
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQ 174
G +G+LGH Q P ++ AL V +ACG + + +TE+G ++ WG+ +
Sbjct: 3072 LGEYGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGK 3131
Query: 175 LG 176
LG
Sbjct: 3132 LG 3133
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG RG +E G S+P +V+ L V V + CG F++ LT+ G++
Sbjct: 3121 VFSWG-DGDFGKLG----RGGSE--GCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEV 3173
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP + L ++I +A G H LA+TD G+VF+WG H
Sbjct: 3174 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDNDH 3233
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P ++ L FV +ACG S S A
Sbjct: 3234 GQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVA 3270
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + L P V AL V V+CG T+ LTEE
Sbjct: 3066 ELYTWGLGE-YGRLGHG-----DNCTQLK-PKLVTALQGHRVVQVACGSRDAQTLCLTEE 3118
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L V ++QI G SLALT G+V++WG
Sbjct: 3119 GLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGK 3178
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I+ L + V H+A G AVT+ G+++ WG+ Q G
Sbjct: 3179 GDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQG 3237
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 36/186 (19%)
Query: 27 GLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+S P+ V++L + AV+ GG + L+ +G++++WG + +LG G+R +PK
Sbjct: 4016 SVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPK 4075
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ------------ 131
L+ L + ++ IA G HS +T G V +WG G +G+LGH +++Q
Sbjct: 4076 LIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTI 4135
Query: 132 ---------------------KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+ PM IE+LA V + CG S A+T G +Y WG
Sbjct: 4136 MCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKG 4195
Query: 171 KDSQLG 176
+LG
Sbjct: 4196 DYHRLG 4201
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG EG GRLG G + +P+K+ AL V A+ G ++ ++ G+L
Sbjct: 599 EVYSWGAGEG-GRLGHG------DTASKEVPTKI-ALEKQVTAIYAGASYSAAVSSVGEL 650
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G+ + P + L +++ +A +G HS+A+TD G +F+WG G
Sbjct: 651 FTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDG 710
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG+ +P+ IE ++ V I G S A++ G LY WG +LG
Sbjct: 711 DFGKLGNGSCNGSPLPVQIEGVSS--VARIYSGSQFSVALSYDGTLYSWGKGHGGRLG 766
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 15/189 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
EL+TWGR GRLG G + +P++V+AL V A+ G +M +T+
Sbjct: 649 ELFTWGRGT-YGRLGHG------NSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDG 701
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G L+ WG +LG G G P + + V +I +G S+AL+ DG ++SWG
Sbjct: 702 GLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSSV--ARIYSGSQFSVALSYDGTLYSWGK 759
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL-- 175
G G+LGH +++ VP ++ AL + + +A G + A+T G+LY WG Q+
Sbjct: 760 GHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQICP 819
Query: 176 -GVPGLPVV 183
GV P++
Sbjct: 820 SGVSRDPII 828
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Query: 31 PSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P K+++L + V V CG F++ LT G ++ WG + LG G+ +PK + L
Sbjct: 4159 PMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQ 4218
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
+II IA G H +A +D G+VF+WG GQLG + P ++++L + + +
Sbjct: 4219 GKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVI 4278
Query: 150 CGGSTSAAVT 159
CG + + A++
Sbjct: 4279 CGSAHTLALS 4288
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 32 SKVKALPVPVAAVS-------CGGFFTM-VLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
S++K +P P A+S GG T+ +T +G+L+ G + LG G P
Sbjct: 3963 SRIK-MPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDSVSTPT 4021
Query: 84 LLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
L+ +L V I ++A +GG H LAL+ DG+VFSWG G G+LGH + P +IEAL+
Sbjct: 4022 LVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALS 4081
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V IACG + SA +T +G + WG + +LG
Sbjct: 4082 GIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLG 4116
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 41/218 (18%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG E +G+LG G + P ++AL + V ++CG + +T +G
Sbjct: 4051 EVFSWGEGE-DGKLGHGNRDSYDR------PKLIEALSGIGVVDIACGSAHSACITSQGH 4103
Query: 60 LWNWGANSNYELGRGDR---------------------------------VGGWKPKLLP 86
+ WG LG GD +G P +
Sbjct: 4104 VLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIE 4163
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVT 146
+L + +I++ G S+ALT G V++WG G + +LGH T + + P + AL + +
Sbjct: 4164 SLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKII 4223
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQ 184
IA G A ++ G+++ WG+ + QLG + +Q
Sbjct: 4224 SIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQ 4261
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
A C G M L+ G++++WGA LG GD P + ++ ++ I G +
Sbjct: 583 AAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIA--LEKQVTAIYAGASY 640
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S A++ G++F+WG G +G+LGH + ++ VP ++AL V +A G + S AVT+
Sbjct: 641 SAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTD 700
Query: 161 KGKLYMWGNAKDSQLG 176
G L+ WG+ +LG
Sbjct: 701 GGLLFAWGDGDFGKLG 716
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 63 WGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N +LG +G +V P L ++ I I+ G ++ DGK+++ G G +
Sbjct: 2912 WGLNDKEQLGGLKGSKVK--LPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACGEGTN 2969
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG N P + L V +A GG + A+T GK++ WG +D +LG
Sbjct: 2970 GRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLG 3027
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+F WG+ GQLG K+P EAL+ IA G T AVT GKLY G
Sbjct: 3946 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATG 4002
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 108/190 (56%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG +P K++ VP+ V+ G ++ +TE G+
Sbjct: 138 EVQSWGRNQ-NGQLGLGTSEDS------LVPQKIQTFQGVPIKMVAAGAEHSVAITENGE 190
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR W P+ + ++ +++ +A G H+++++ G ++++G+
Sbjct: 191 LYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSK 250
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH ++ VP ++AL+D+ ++ ++ G S A+T G LY WG K Q+GV G
Sbjct: 251 YGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGV-G 309
Query: 180 LPVVQPCPVE 189
V + PV+
Sbjct: 310 DNVDRCSPVQ 319
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + GRLG G + L IP + AL + + ++CG + +T EG+
Sbjct: 86 ELYSWGWGD-FGRLGHG------NSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGE 138
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G P+ + V I +A G HS+A+T++G+++ WG+G
Sbjct: 139 VQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGR 198
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ +P + ++ + + +ACG + +V+ G LY +G +K QLG
Sbjct: 199 YGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLG 255
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTE-EGQLW 61
+WGR E +G+LG G + +P+ + AL + +++CG T+ +E +L+
Sbjct: 36 SWGRGE-DGQLGHG------DTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELY 88
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ P+ + L +RI QIA G H LA+T +G+V SWG +G
Sbjct: 89 SWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNG 148
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG +++ VP I+ + +A G S A+TE G+LY WG + LG+
Sbjct: 149 QLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGL 204
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
ELY WG G LGLG + IP KV ++ + V+CG T+ ++ G
Sbjct: 190 ELYGWGWGR-YGNLGLG------DRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGG 242
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG G+ P+ L L D I Q++ G HS+ALT G ++ WG+
Sbjct: 243 LYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNK 302
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G ++ P+ ++ D+ V I+CG + AVTEK ++ WG + QLG
Sbjct: 303 FGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLG 359
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P K++AL ++ VS G +M LT G L+ WG N ++G GD V P +
Sbjct: 264 VPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFP 323
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
D +++QI+ G H++A+T+ VFSWG G +GQLGH T ++ P +IEAL+
Sbjct: 324 HDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALS 376
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P V +S G T+ L + +WG + +LG GD P L L +I IA
Sbjct: 12 PSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIA 71
Query: 98 NGGYHSLALTDD-GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
G H+LA ++ +++SWG+G G+LGH + + +P I AL + IACG S
Sbjct: 72 CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCL 131
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
AVT +G++ WG ++ QLG+
Sbjct: 132 AVTMEGEVQSWGRNQNGQLGL 152
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG E +G+LG G L P V+AL + V+CG + ++ +G+
Sbjct: 3090 KVFSWGEGE-DGKLGHG------NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGE 3142
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD V KPKL+ L R++Q+A G +LALT+DG VFSWG
Sbjct: 3143 LYTWGLGEYGRLGHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3202
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LG ++ P IE L+ V I CG S A+T G+++ WG +LG
Sbjct: 3203 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG 3261
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G + P +++ L + V + CG F++ LT G++
Sbjct: 3197 VFSWG-DGDFGKLGRGGSEGSD------TPHEIERLSGIGVVQIECGAQFSLALTRAGEV 3249
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP+ + L R+I +A G H LA+TD G+V++WG H
Sbjct: 3250 WTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDH 3309
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P ++ L FV +ACG S S A
Sbjct: 3310 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3346
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG + +P ++ L V AV GG + LT +G++++WG +
Sbjct: 3046 GRLGLGVTHN------VPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED 3099
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R KP+L+ L +I +A G HS A++ G++++WG G +G+LGH
Sbjct: 3100 GKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3159
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P ++ ALA V +ACG + + A+TE G ++ WG+ +LG
Sbjct: 3160 VTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3209
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V AV+ GG + LT EG+++ WG + +LG G+R+ +PKL+ +L + + IA
Sbjct: 4132 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIAC 4191
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSA 156
G HS A+T G V +WG G +G+LGH +++Q P ++EAL IACG + +
Sbjct: 4192 GSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTL 4251
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
+T+ ++ WG+ +LG
Sbjct: 4252 CITDDDNVWSWGDGDYGKLG 4271
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + L P V AL V V+CG T+ LTE+
Sbjct: 3142 ELYTWGLGE-YGRLGHG-----DNVTQLK-PKLVVALAGRRVVQVACGSRDAQTLALTED 3194
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L + ++QI G SLALT G+V++WG
Sbjct: 3195 GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGK 3254
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I L V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3255 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3313
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDD 109
+++++G+++ G +N LG G P LP L V+ + + +GG H+LALT D
Sbjct: 3029 FIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLD 3088
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
GKVFSWG G G+LGH P ++EAL + + +ACG S SAA++ +G+LY WG
Sbjct: 3089 GKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGL 3148
Query: 170 AKDSQLG 176
+ +LG
Sbjct: 3149 GEYGRLG 3155
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLW 61
Y+WG E + RLG G + ++P+K+ AL V +V CG ++ +T G L
Sbjct: 635 YSWGTGE-DHRLGHG------DTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLL 687
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGG 119
WG + LG G+ P L+ L D ++ +A +G HSLALT +G VF+WG G
Sbjct: 688 TWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGD 747
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+G+LG+ P+++E+L V + G S A++ +G+LY WG A
Sbjct: 748 YGKLGNGNCNGSLQPILVESLPR--VQRVFAGSQFSLALSSEGQLYSWGKA 796
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT+ G +
Sbjct: 4259 VWSWG-DGDYGKLGRG------GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAV 4311
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L +II IA G H +A +D G+V++WG
Sbjct: 4312 YTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDE 4371
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++ AL + + + CG + + A++
Sbjct: 4372 GQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4410
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+ TWG+ GR G LG G ++ P V+AL ++CG T+ +T+
Sbjct: 4204 HVLTWGK----GRYGRLGHGDSEDQLR----PKLVEALLGYRAIDIACGSGDAQTLCITD 4255
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4256 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWG 4315
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LGH + + P + AL + + IA G A ++ G++Y WG+ + QLG
Sbjct: 4316 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 4375
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 32 SKVKALPVPVAAVS----------CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
+K +A P+P+ V+ C G + + ++WG ++ LG GD
Sbjct: 596 AKPEAEPLPMEEVAHEVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV 655
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
P + L + + G +S A+T G + +WG G + +LGH + ++ +P ++ AL+
Sbjct: 656 PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS 715
Query: 142 DEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
D V +A G + S A+T +G ++ WG+ +LG
Sbjct: 716 DHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 752
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEG 58
L TWGR RLG G + S+P+ V AL V A+ G ++ LT EG
Sbjct: 686 LLTWGRGT-YARLGHG------NSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 738
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG +LG G+ G +P L+ +L R+ ++ G SLAL+ +G+++SWG
Sbjct: 739 LVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSLALSSEGQLYSWGKA 796
Query: 119 ---GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GH QL Q VP ++ +L + + +A + A++ G+++ WG DSQ
Sbjct: 797 TCLGH-QLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGR-NDSQQ 854
Query: 176 GVPGLPVVQP 185
P +P
Sbjct: 855 ICPASVSSEP 864
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG- 99
+ V+C ++L++EG+L+ W L + + +P + + I IA
Sbjct: 571 IKQVACCETQMLILSQEGKLYTW------RLAKPEA----EPLPMEEVAHEVFISIAGHC 620
Query: 100 -GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H LA+ + +SWG G +LGH T + VP I AL V + CG S SAA+
Sbjct: 621 EGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 680
Query: 159 TEKGKLYMWGNAKDSQLG 176
T G L WG ++LG
Sbjct: 681 TCGGNLLTWGRGTYARLG 698
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 63 WGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N +LG +G +V P + +R I IA G ++ DGKV++ G G +
Sbjct: 2988 WGLNDKEQLGGLKGSKVK--VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTN 3045
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T N +P + L V +A GG + A+T GK++ WG +D +LG
Sbjct: 3046 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 3103
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG D G+LG G N G L P V++LP V V G F++ L+ EGQL+
Sbjct: 740 VFAWG-DGDYGKLGNG-----NCNGSLQ-PILVESLP-RVQRVFAGSQFSLALSSEGQLY 791
Query: 62 NWGANS--NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+WG + ++L G P+L+ +L RI+ +A H LAL+ G+VF WG
Sbjct: 792 SWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRND 851
Query: 120 HGQLGHSFTQNQ---KVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
Q+ + ++ + P+++ +L + IAC + S T+
Sbjct: 852 SQQICPASVSSEPLLRTPILV-SLPTFPASGIACTSAQSLVWTQSS 896
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 60 LWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG N +LG G R+ P L +R +Q+A G A+T DGK+F+ GY
Sbjct: 4047 IYGWGHNHRGQLGGLEGSRIK--TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4104
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG + + +P ++ +L FV +A GG A+T +G++Y WG +D +L
Sbjct: 4105 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4164
Query: 176 G 176
G
Sbjct: 4165 G 4165
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLNGKKIACLSYGSGPHIV 88
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 148
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG AV + G++Y+WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 208
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 209 GNGQLGL 215
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 148 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 199
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 200 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 259
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 260 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 319
Query: 177 VPGL 180
+P L
Sbjct: 320 LPHL 323
>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
(POZ) domain containing protein 1 [Oryctolagus
cuniculus]
Length = 531
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 93/176 (52%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +MVL +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVY 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V++WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+ L DG+V++WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGL 215
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E+Y WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVYAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYAWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P + + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHVMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S + G++Y WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 34 ALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ +Q C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVC 122
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 64 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLNGKKIACLSYGSGPHIV 117
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 118 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 177
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P + L ++ V IACG AV + G++Y+WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 238 GNGQLGL 244
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 177 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 228
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 229 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 288
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 289 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 348
Query: 177 VPGL 180
+P L
Sbjct: 349 LPHL 352
>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 679
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 105/184 (57%), Gaps = 11/184 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LYT G ++ G+LG PN+ P + AL V VSCG ++ LT GQ
Sbjct: 56 KLYTCGNND-HGQLGHDTNNLPNKR-----PQFISALENYIVTQVSCGLSHSLALTNWGQ 109
Query: 60 LWNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L++WG+N+ +LG D V P+++ ++ ++QI+ G H LALT+ G++F+WG
Sbjct: 110 LFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGAN 169
Query: 119 GHGQLGHSFTQNQKVP--MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG T +KVP ++++LA + IACGG+ S AV++ G ++ WG QLG
Sbjct: 170 EYGQLGLG-TTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 228
Query: 177 VPGL 180
+ L
Sbjct: 229 LNDL 232
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 97/178 (54%), Gaps = 6/178 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LY WG G LGLG G E ++ + V +CGG T++LT++G+L+
Sbjct: 3 LYCWG-STVHGELGLG---GIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLY 58
Query: 62 NWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N + +LG + + +P+ + L + + Q++ G HSLALT+ G++FSWG
Sbjct: 59 TCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNAT 118
Query: 121 GQLGHSFTQ-NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH + P +I+++A + V I+CG S A+T G+L+ WG + QLG+
Sbjct: 119 GQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGL 176
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 12/169 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSK--VKALP-VPVAAVSCGGFFTMVLTEE 57
EL+ WG +E G+LGLG G +P+ VK+L +P+A ++CGG + +++
Sbjct: 162 ELFAWGANE-YGQLGLG-------TTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKS 213
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N+ +LG D P L L + + I+ G S+ LT +G VF+ G
Sbjct: 214 GAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGL 273
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEKGKLY 165
G GQLGH N+ +P ++ L +T IACG T A V +GK+Y
Sbjct: 274 GTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 60 LWNWGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
L+ WG+ + ELG G + P+ + + Q A GG H+L LT DGK+++ G
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 118 GGHGQLGHSFTQN--QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
HGQLGH T N K P I AL + VT ++CG S S A+T G+L+ WG+ QL
Sbjct: 63 NDHGQLGHD-TNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQL 121
Query: 176 GVPGLPVVQPCP 187
G V P P
Sbjct: 122 GHDLDMVSYPAP 133
>gi|193783741|dbj|BAG53723.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 63 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLNGKKIACLSYGSGPHIV 116
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 117 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 176
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P + L ++ V IACG AV + G++Y+WG
Sbjct: 177 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 236
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 237 GNGQLGL 243
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 7/182 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++TWG + +LG G G + V V+CG + ++VLT +G++
Sbjct: 123 EVFTWGHN-AYSQLG----NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 177
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII-QIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N++ ++G G V P+ + + +++ IA G +A+ D G+V+ WGY G
Sbjct: 178 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 237
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
+GQLG + NQ P + AL V +ACG + TSAA T+ G +YMWG + + +P
Sbjct: 238 NGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYTHTSAAKTQGGHVYMWGQCRGQSVILP 297
Query: 179 GL 180
L
Sbjct: 298 HL 299
>gi|242038901|ref|XP_002466845.1| hypothetical protein SORBIDRAFT_01g015100 [Sorghum bicolor]
gi|241920699|gb|EER93843.1| hypothetical protein SORBIDRAFT_01g015100 [Sorghum bicolor]
Length = 485
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 96/190 (50%), Gaps = 27/190 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
L+ WG+++G P G P+ V + VSCG M L+E+G L
Sbjct: 141 RLWVWGQNQGSDY--------PRLFWGAFTPNTV------IKQVSCGAVHVMALSEDGLL 186
Query: 61 WNWGANSNY-ELGRGDRVGGWKPKLLPNLV---------DVRIIQIANGGYHSLALTDDG 110
WG+ + Y +LGRG G + + N V+I++++ G YH+ A++++G
Sbjct: 187 QAWGSYNEYGQLGRGRTSQGLQGARVLNAYARFLDDAPEQVKIVRVSCGEYHTAAISENG 246
Query: 111 KVFSWGYGGHGQLGHSFTQ---NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
+V++WG G GQLGH Q N+ +P I AL V ++CGG S AVTE G LY W
Sbjct: 247 EVYTWGLGSMGQLGHCSLQSGDNELIPRRIVALDGIVVRDVSCGGVHSCAVTESGALYAW 306
Query: 168 GNAKDSQLGV 177
G QLGV
Sbjct: 307 GGGHVGQLGV 316
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 17/131 (12%)
Query: 60 LWNWGANSNYELGR-GDRVGGWKPKLLP-------NLVDVRIIQIANGGYHSLALTDDGK 111
++ WG N + + R G PK LP N +R IA G H+ A+ DG
Sbjct: 21 IYIWGYNHSGQTARKGKECHLRIPKSLPPKLFKLGNGKSLRWTDIACGREHTAAVASDGS 80
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE---------KG 162
+F+WG GQLG ++ K P +++L EFV ++CG +AAV E K
Sbjct: 81 LFTWGANEFGQLGDGTEESAKEPKKVKSLETEFVKSVSCGAHCTAAVAEPRENDGTVSKS 140
Query: 163 KLYMWGNAKDS 173
+L++WG + S
Sbjct: 141 RLWVWGQNQGS 151
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
E+YTWG G+LG G NE IP ++ AL + V VSCGG + +TE G
Sbjct: 247 EVYTWGLGS-MGQLGHCSLQSGDNEL----IPRRIVALDGIVVRDVSCGGVHSCAVTESG 301
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKL---------LPNLVDVRIIQIANGGY-HSLALTD 108
L+ WG +LG G + G + L +P LV +++A G+ H+L
Sbjct: 302 ALYAWGGGHVGQLGVGPQGGFFSCSLNGSDMLLRNIPVLVIPSGVRLATCGHSHTLVSMK 361
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
DG+++ WGY +GQ + + P ++ E V +A GG SA +T+ L
Sbjct: 362 DGRIYGWGYNSYGQAANEKSTYAWFPSPVDWCVGE-VRRLAAGGGHSAVLTDACSL 416
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGG---WKPKLLPNLVDVRIIQ 95
V + VSCG + T ++E G+++ WG S +LG G P+ + L + +
Sbjct: 227 VKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDNELIPRRIVALDGIVVRD 286
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLG-------HSFTQN------QKVPMVIEALAD 142
++ GG HS A+T+ G +++WG G GQLG S + N + +P+++
Sbjct: 287 VSCGGVHSCAVTESGALYAWGGGHVGQLGVGPQGGFFSCSLNGSDMLLRNIPVLVIPSGV 346
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWG 168
T CG S + + G++Y WG
Sbjct: 347 RLAT---CGHSHTLVSMKDGRIYGWG 369
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 73/196 (37%), Gaps = 63/196 (32%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY-- 101
++CG T + +G L+ WGAN +LG G +PK + +L + ++ G +
Sbjct: 65 IACGREHTAAVASDGSLFTWGANEFGQLGDGTEESAKEPKKVKSLETEFVKSVSCGAHCT 124
Query: 102 ---------------------------------------------------HSLALTDDG 110
H +AL++DG
Sbjct: 125 AAVAEPRENDGTVSKSRLWVWGQNQGSDYPRLFWGAFTPNTVIKQVSCGAVHVMALSEDG 184
Query: 111 KVFSWG-YGGHGQLGHSFT----QNQKVPMVIEALADEF-----VTHIACGGSTSAAVTE 160
+ +WG Y +GQLG T Q +V D+ + ++CG +AA++E
Sbjct: 185 LLQAWGSYNEYGQLGRGRTSQGLQGARVLNAYARFLDDAPEQVKIVRVSCGEYHTAAISE 244
Query: 161 KGKLYMWGNAKDSQLG 176
G++Y WG QLG
Sbjct: 245 NGEVYTWGLGSMGQLG 260
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 64 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLNGKKIACLSYGSGPHIV 117
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 118 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 177
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P + L ++ V IACG AV + G++Y+WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 238 GNGQLGL 244
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 177 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 228
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 229 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 288
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 289 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 348
Query: 177 VPGL 180
+P L
Sbjct: 349 LPHL 352
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 108/190 (56%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG +P K++ VP+ V+ G ++ +TE G+
Sbjct: 138 EVQSWGRNQ-NGQLGLGTSEDS------LVPQKIQTFQGVPIKMVAAGAEHSVAITENGE 190
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR W P+ + ++ +++ +A G H+++++ G ++++G+
Sbjct: 191 LYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSK 250
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH ++ VP ++AL+D+ ++ ++ G S A+T G LY WG K Q+GV G
Sbjct: 251 YGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGV-G 309
Query: 180 LPVVQPCPVE 189
V + PV+
Sbjct: 310 DNVDRCSPVQ 319
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + GRLG G + L IP + AL + + ++CG + +T EG+
Sbjct: 86 ELYSWGWGD-FGRLGHG------NSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGE 138
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G P+ + V I +A G HS+A+T++G+++ WG+G
Sbjct: 139 VQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGR 198
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ +P + ++ + + +ACG + +V+ G LY +G +K QLG
Sbjct: 199 YGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLG 255
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTE-EGQLW 61
+WGR E +G+LG G + +P+ + AL + +++CG T+ +E +L+
Sbjct: 36 SWGRGE-DGQLGHG------DTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELY 88
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ P+ + L +RI QIA G H LA+T +G+V SWG +G
Sbjct: 89 SWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNG 148
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG +++ VP I+ + +A G S A+TE G+LY WG + LG+
Sbjct: 149 QLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGL 204
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
ELY WG G LGLG + IP KV ++ + V+CG T+ ++ G
Sbjct: 190 ELYGWGWGR-YGNLGLG------DRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGG 242
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG G+ P+ L L D I Q++ G HS+ALT G ++ WG+
Sbjct: 243 LYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNK 302
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G ++ P+ ++ D+ V I+CG + AVTEK ++ WG + QLG
Sbjct: 303 FGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLG 359
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P K++AL ++ VS G +M LT G L+ WG N ++G GD V P +
Sbjct: 264 VPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFP 323
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
D +++QI+ G H++A+T+ VFSWG G +GQLGH T ++ P +IEAL+
Sbjct: 324 HDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALS 376
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P V +S G T+ L + +WG + +LG GD P L L +I IA
Sbjct: 12 PSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIA 71
Query: 98 NGGYHSLALTDD-GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
G H+LA ++ +++SWG+G G+LGH + + +P I AL + IACG S
Sbjct: 72 CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCL 131
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
AVT +G++ WG ++ QLG+
Sbjct: 132 AVTMEGEVQSWGRNQNGQLGL 152
>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
II]
Length = 487
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 93/171 (54%), Gaps = 3/171 (1%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG + G+LG G +S P KVKAL V VSCG + T LT++ +
Sbjct: 112 ELYTWGCSK-NGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKK 170
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
WG LG GD + PKL+ +L + I +I+ GG+H+ L GK++ +G G
Sbjct: 171 ALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGA 230
Query: 120 HGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G+LG T + +P ++E L D +T ++ G SAAVT+ GK+Y WG
Sbjct: 231 FGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQ 281
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
TWG LGL G + + P +++L +P+ +SCGG T +L G+L+
Sbjct: 173 TWG-------LGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYM 225
Query: 63 WGANSNYELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+G + +LG G P+LL L D++I +++ G HS A+T GKV++WG GG
Sbjct: 226 FGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGG-- 283
Query: 122 QLGHSFT---QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV- 177
+LGH F + P + L F+ I+CG S S A+++ G +Y WG K+ G+
Sbjct: 284 RLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKNIGHGIQ 343
Query: 178 ---PGLPVVQP 185
P +P P
Sbjct: 344 GIHPNMPSKHP 354
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW------KPKLLPNLVDVRII 94
V V+C T + G+L+ WG + N +LG G +P + L ++I
Sbjct: 94 VIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVI 153
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
Q++ G YH+ LTDD K +WG G G+LGH TQ+ P +IE+LA + I+CGG
Sbjct: 154 QVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHH 213
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
+A + GKLYM+G +LG
Sbjct: 214 TAILLVTGKLYMFGGGAFGKLG 235
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 86 PNLVD-----VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
P+LVD I +++ G +S A+T+ G + WGYGG GQLG ++ VP V +L
Sbjct: 32 PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ V +AC +AA+ G+LY WG +K+ +LG
Sbjct: 92 KN--VIQVACSDRHTAAILSNGELYTWGCSKNGKLG 125
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++YTWG+ G + GP E LS P ++ L + +SCG ++ L++ G
Sbjct: 275 KVYTWGQGGRLGHIFNGP-----EHDFLS-PKRLSNLEKAFIVDISCGNSHSVALSDVGD 328
Query: 60 LWNWGANSNYELGRGDRVGGWKPKL---LPNLVDVRIIQIANGGYHSLALTDDGKV 112
++ WG N +G G + G P + P L + I+Q+ HS+AL+D G +
Sbjct: 329 IYTWGMTKN--IGHG--IQGIHPNMPSKHPILQNKNIVQVVCSSSHSIALSDIGAL 380
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLNGKKIACLSYGSGPHIV 88
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 148
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P + L ++ V IACG AV + G++Y+WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 208
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 209 GNGQLGL 215
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 148 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 199
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 200 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 259
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 260 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 319
Query: 177 VPGL 180
+P L
Sbjct: 320 LPHL 323
>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 95/169 (56%), Gaps = 3/169 (1%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S P +V+ L V+ ++ G F + L+ + LW WG N +LG GD +
Sbjct: 184 PGDIKNISTPVRVQGLE-QVSMIAVGAFHNLALSVDRILWAWGNNEYGQLGIGDTQPRSQ 242
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ-NQKVPMVIEAL 140
P + L ++ ++ IA GG+HS ALT +G+V++WG G HG+LG + + VP+ ++ L
Sbjct: 243 PIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPLQVQLL 302
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
A E + ++CGG+ S +T G+++ +G +LG G V P+E
Sbjct: 303 AGEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGRLG-DGRKVTTGHPME 350
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG E +G+LG+G G +E + A V +AV G ++ + ++G L+
Sbjct: 10 VLAWGSGE-DGQLGMG---GCDEKDRARCICALDAYAV--SAVVAGSRNSLAICDDGSLF 63
Query: 62 NWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N LG P + LV V+I+Q A GG+H LA+ D G+ ++WG +
Sbjct: 64 TWGWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEY 123
Query: 121 GQLGH--------SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
GQ G + + +P+ V +A GG+ S +T++G ++ WG
Sbjct: 124 GQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQEGHVWTWGQ 180
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG+ + +LG G + + + L + + G +SLA+ DDG +F+WG+ G
Sbjct: 13 WGSGEDGQLGMGGCDEKDRARCICALDAYAVSAVVAGSRNSLAICDDGSLFTWGWNQRGT 72
Query: 123 LGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LGH T+ + P ++AL + A GG AV +KG+ Y WG + Q G
Sbjct: 73 LGHPPETKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCG 127
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y WGR E GRLG G ++ +P +V+ L + VSCGG ++VLT +G+
Sbjct: 272 EVYAWGRGE-HGRLGFG-----DDKSSHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDGR 325
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLP-NLVDVRIIQ----------IANGGYHSLAL 106
++++G + LG G +V P +P NL + +A GG H+LA+
Sbjct: 326 IFSYGRGDHGRLGDGRKVTTGHPMEVPINLPPPKTSTSSEGLWQANYVACGGRHTLAI 383
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V +WG G GQLG + I AL V+ + G S A+ + G L+ WG +
Sbjct: 10 VLAWGSGEDGQLGMGGCDEKDRARCICALDAYAVSAVVAGSRNSLAICDDGSLFTWGWNQ 69
Query: 172 DSQLGVP 178
LG P
Sbjct: 70 RGTLGHP 76
>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
rubripes]
Length = 527
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 100/181 (55%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEG 58
E++ G + G LGLG + E P ++ L + ++S G G + T +G
Sbjct: 42 EVFALGTN-CSGCLGLGDLQSTIE------PRRIDVLCGKKIVSLSYGTGPHVAIATADG 94
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++++WG N +LG G G P L+ NL+ R+I++A G +H++ALT DG+VF+WGY
Sbjct: 95 EVFSWGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGY 154
Query: 118 GGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G T NQ P V L ++ V +IACG S AV + G++Y WG + QLG
Sbjct: 155 NNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLG 214
Query: 177 V 177
+
Sbjct: 215 L 215
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++ WG + G++G G N+ + S ++ V ++CG +M + + G++
Sbjct: 148 EVFAWGYNNS-GQVG--SGSTANQPTPRRVSSCLQ--NKVVVNIACGQLCSMAVLDSGEI 202
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG N N +LG G+ P + L V +IQ+A G H++ALTD+G V+SWG +
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSY 262
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG NQ VP +I + AC S TSAA T+ G++ MWG + + P
Sbjct: 263 GQLGTGNKCNQAVPTLINTEKERMSEVAACHTSHTSAAKTQSGQVLMWGQCRGQAVASPH 322
Query: 180 L 180
L
Sbjct: 323 L 323
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLNGKKIACLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 233 GNGQLGL 239
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 172 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 223
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 343
Query: 177 VPGL 180
+P L
Sbjct: 344 LPHL 347
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 64 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLNGKKIACLSYGSGPHIV 117
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 118 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 177
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG AV + G++Y+WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 238 GNGQLGL 244
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 177 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 228
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 229 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 288
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 289 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 348
Query: 177 VPGL 180
+P L
Sbjct: 349 LPHL 352
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLNGKKIACLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 233 GNGQLGL 239
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 172 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 223
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 343
Query: 177 VPGL 180
+P L
Sbjct: 344 LPHL 347
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TS V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLG 328
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ R+ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH-SLALTDDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + +IA G H S + G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 94/170 (55%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + +P +V AL V AV GG LT +G++++WG +
Sbjct: 1327 GRLGLGLS-----SGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 1381
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH T
Sbjct: 1382 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDT 1441
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 1442 TTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 1491
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 1479 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 1531
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 1532 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 1591
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P +++ L + +T +ACG S S A
Sbjct: 1592 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 1628
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 82/136 (60%), Gaps = 2/136 (1%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
AV+ GG + L+ EG++++WG + +LG G R +P+++ +L + ++ +A GG H
Sbjct: 2351 AVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAH 2410
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S +T G +++WG G +G+LGHS +++Q P ++EAL V IACG + + +T+
Sbjct: 2411 SACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTD 2470
Query: 161 KGKLYMWGNAKDSQLG 176
++ WG+ +LG
Sbjct: 2471 DDTVWSWGDGDYGKLG 2486
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 90/170 (52%), Gaps = 5/170 (2%)
Query: 12 GRLGLGPGRGPNE-AGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNY 69
G + LG R E + +PS + L + V V+ G +T EG+++ G +N
Sbjct: 1268 GLILLGRIRAEEEDLAAIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNG 1327
Query: 70 ELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS 126
LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG G G+LGH
Sbjct: 1328 RLGLGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF 1387
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 1388 SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 1437
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 1424 ELYTWGLGE-YGRLGHG------DTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDE 1476
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 1477 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 1536
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 1537 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 1595
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 2419 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDD 2471
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 2472 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGK 2531
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + IA G TE G++Y WG+ + QLG
Sbjct: 2532 GDYHRLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 2590
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 2474 VWSWG-DGDYGKLGRG------GSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAV 2526
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L + I IA G H + T+DG+V++WG
Sbjct: 2527 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDE 2586
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 2587 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 2623
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 2260 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 2319
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 2320 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 2379
Query: 176 G 176
G
Sbjct: 2380 G 2380
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 62 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLNGKKIACLSYGSGPHIV 115
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 116 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 175
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG AV + G++Y+WG
Sbjct: 176 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 235
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 236 GNGQLGL 242
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 175 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTGC-LQNKV------VVTIACGQMCCMAVVDT 226
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 227 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 286
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 287 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 346
Query: 177 VPGL 180
+P L
Sbjct: 347 LPHL 350
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+L+ WG + +G+LGLG P VKAL V ++CG T+ LT G+
Sbjct: 131 QLFCWGSN-ADGQLGLGTPLTIAHT-----PRMVKALGTSIVVQIACGKKHTLALTNNGE 184
Query: 60 LWNWGANSNYELGRGDRVG-GWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L+ WG+NS+ +LG G V +PKL+ L + I IA GGYHS+ ++ G VF WG
Sbjct: 185 LYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRN 244
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG + ++ VP +++ L + V ++ACG S +T G ++ G QLG
Sbjct: 245 TFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLG 302
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
ELY WG + +G+LGLG + + P + L +P+A ++CGG+ ++V+++ G
Sbjct: 184 ELYAWGSN-SDGQLGLG-----QDVKIETRPKLITGLATIPIAFIACGGYHSIVVSKSGA 237
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D + P LL L + ++ +A G S+ LT DG VF+ G G
Sbjct: 238 VFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGM 297
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMW 167
+GQLGH N+ +P I L VT I+CG T A V +GK+Y W
Sbjct: 298 YGQLGHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALPVPVAAVSCGGFFTMVLTEEGQL 60
+Y WG G LGLG N + +P ++ V ++CG T+++T++G++
Sbjct: 28 MYCWG-STVYGELGLGGIEDEN----ILMPRELDFQKATAVEQIACGETHTVLITKDGEV 82
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++ G N + +LG + +++P L Q A G HS+A+ + G++F WG
Sbjct: 83 FSCGNNDSGQLGHEKPTK--RLQMIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGSNAD 140
Query: 121 GQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + P +++AL V IACG + A+T G+LY WG+ D QLG+
Sbjct: 141 GQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGL 198
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 6/137 (4%)
Query: 45 SCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG-GWKPKLLPNLVDVRIIQIANGGYHS 103
+CG ++ + GQL+ WG+N++ +LG G + P+++ L ++QIA G H+
Sbjct: 117 ACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHT 176
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKV---PMVIEALADEFVTHIACGGSTSAAVTE 160
LALT++G++++WG GQLG Q+ K+ P +I LA + IACGG S V++
Sbjct: 177 LALTNNGELYAWGSNSDGQLG--LGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSK 234
Query: 161 KGKLYMWGNAKDSQLGV 177
G ++ WG QLG+
Sbjct: 235 SGAVFGWGRNTFGQLGM 251
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 29/182 (15%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LG+ N+ +P +K L V V+CG F++ LT +G +
Sbjct: 238 VFGWGRNTF-GQLGM------NDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGV 290
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA +LG G P+ + L+ + QI+ G H+LAL GKV++WG GG
Sbjct: 291 FTCGAGMYGQLGHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAWGLGG 350
Query: 120 HGQ---------------LGHSFTQNQKVPMVIEALA----DEFVTHIACGGSTS-AAVT 159
GQ LG ++N+ + M +++ + D V HI GG A VT
Sbjct: 351 SGQLGSQTARSVATPQMVLGPWSSKNRSLAMEVDSASSTSEDCVVKHIFSGGDHCFATVT 410
Query: 160 EK 161
+K
Sbjct: 411 QK 412
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
+D ++ WG +G+LG +++ + P ++ V IACG + + +T+ G+++
Sbjct: 24 NDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDGEVF 83
Query: 166 MWGNAKDSQLG 176
GN QLG
Sbjct: 84 SCGNNDSGQLG 94
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 99.0 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 97/181 (53%), Gaps = 14/181 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D EG+LG G N P ++ L + +SCG F ++ L E+G++
Sbjct: 105 IYSWG-DGSEGQLGTGKFSSKN-----FTPKRITGLLNRKIIQISCGNFHSVALAEDGRV 158
Query: 61 WNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG N +LG G ++ P+L+ +L + ++Q+ GG + AL+ G VF+WG
Sbjct: 159 FSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNN 218
Query: 120 HGQLGHSFTQNQKV----PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQLG F + K P +++L D V +I+CG +A + + G +Y +G+ QL
Sbjct: 219 AGQLG--FKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQL 276
Query: 176 G 176
G
Sbjct: 277 G 277
Score = 99.0 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANG 99
+ VSCG ++ + +EG +++WG S +LG G + PK + L++ +IIQI+ G
Sbjct: 86 IVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCG 145
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
+HS+AL +DG+VFSWG GQLG S NQ P ++++L + + GGS + A+
Sbjct: 146 NFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFAL 205
Query: 159 TEKGKLYMWGNAKDSQLG 176
+ G ++ WG QLG
Sbjct: 206 SMSGTVFAWGRNNAGQLG 223
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V VS G ++ L ++G L + G N +LGR + + + + +L I+ ++ G
Sbjct: 36 VQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGR--KGNNSRIEQISSLEAQTIVDVSCGT 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+A+ D+G ++SWG G GQLG F+ P I L + + I+CG S A+
Sbjct: 94 NHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALA 153
Query: 160 EKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
E G+++ WG K QLG+ + Q P
Sbjct: 154 EDGRVFSWGQNKCGQLGLGSQIINQATP 181
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 85/153 (55%), Gaps = 10/153 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG+++ G+LGLG ++ + P VK+L +P+ V+ GG T L+ G +
Sbjct: 158 VFSWGQNKC-GQLGLG-----SQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTV 211
Query: 61 WNWGANSNYELG-RGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG N+ +LG + D + G +KP + +L D+ + I+ G H+ L DG V+++G
Sbjct: 212 FAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDD 271
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
+GQLG VP IE + + V+ +ACG
Sbjct: 272 TYGQLGQQSGNQTSVPQKIEEYSRQ-VSQVACG 303
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 84/138 (60%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
+ V+CGG ++ L E+G+++ G+N+ +LG +R G KP+ + L D I+ +A G
Sbjct: 37 IKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGH-EREGN-KPEQIGALADQHIVHVACGE 94
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLGH+ T++ +P +I+ L + + ++CG A+
Sbjct: 95 SHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALA 154
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG + QLG+
Sbjct: 155 ADGQFFTWGQNRHGQLGL 172
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +VK+L +P+A V+ GG + L+ G
Sbjct: 158 QFFTWGQNR-HGQLGLGK-EFPSQAS----PQRVKSLEGIPLAQVAAGGAHSFALSLSGA 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 272 FGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 331
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 332 HTCNVKCPSPVK 343
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LG ++IP +K L + VSCG + M L +GQ
Sbjct: 105 QLFSWGAG-SDGQLG-----HTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQ 158
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG N + +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 159 FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRN 218
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S +++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 219 NAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLG 276
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 19/196 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L+++GQ
Sbjct: 55 EVYTCGSNT-KGQLGHEREGNKPEQIGALA--------DQHIVHVACGESHSLALSDQGQ 105
Query: 60 LWNWGANSNYELGRG---DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H +AL DG+ F+WG
Sbjct: 106 LFSWGAGSDGQLGHTTTEDSVA--IPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWG 163
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P +++L + +A GG+ S A++ G ++ WG Q
Sbjct: 164 QNRHGQLGLGKEFP-SQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQ 222
Query: 175 LGVPGLPVVQ-PCPVE 189
LG+ Q PC V+
Sbjct: 223 LGLSDETDRQSPCHVK 238
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P+ + D I ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 25 EPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNK--PEQIGAL 82
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
AD+ + H+ACG S S A++++G+L+ WG D QLG
Sbjct: 83 ADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLG 118
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 24/177 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LGL +E S P VK L V +SCG T VLT+ G +
Sbjct: 212 VFGWGRNNA-GQLGLS-----DETDRQS-PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 264
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 265 FTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEF----VTHIACGGSTSAAVTEK 161
GQLG T N K P ++ + AD F V HI GG + + K
Sbjct: 325 RGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSFKYHIVKHIFSGGDQTFVLCSK 381
>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
Length = 709
Score = 99.0 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 14/162 (8%)
Query: 27 GLSIPSKVKALPVP------VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV--- 77
G++ SK PV + V+CG + T+ L++EGQ++ WG + + + RGDR
Sbjct: 153 GITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNK--RGDRSQER 210
Query: 78 ---GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP 134
+KP LL + +I QI G +HSLAL D+G ++SWG G G+ GH ++Q+ P
Sbjct: 211 KDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGHGKFEDQETP 270
Query: 135 MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
I+ + +T I G + A+T ++Y WG+ + Q G
Sbjct: 271 QRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCG 312
Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 40/205 (19%)
Query: 2 LYTWGRDE-GEGRLGLGPGRGPNEAGGLSIPSKVKALPVPV-AAVSCGGFFTMVLTEEGQ 59
LY+WG E GE G G+ ++ P ++K + + G T+ +T + Q
Sbjct: 248 LYSWGVGEKGE----CGHGKFEDQ----ETPQRIKFFDGKIITQIEAGNHHTLAITADNQ 299
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV--------------------------RI 93
++ WG + G G+ ++ +P LV+ +I
Sbjct: 300 VYAWGDGRYGQCGFGE----FENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKI 355
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
QIA G H+L LT G++FS+GY GQLGH+ N P ++E + + +A G +
Sbjct: 356 KQIAAGEMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRN 415
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGVP 178
S +T K +Y GN + Q G+P
Sbjct: 416 HSLCLTNKNDVYACGNNQYGQCGLP 440
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 69/119 (57%), Gaps = 2/119 (1%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W++G N+ ELG G P+ + L +++I +++GG HS +T+DGK++ G
Sbjct: 86 VWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNL 145
Query: 120 HGQLGHS--FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
H +LG T ++K +E L F+ +ACG + A++++G++Y+WG + ++ G
Sbjct: 146 HDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKRG 204
Score = 40.0 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V+S+G G+LG +P + L V ++ GG S VTE GKL+M G+
Sbjct: 86 VWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNL 145
Query: 172 DSQLGVPGL 180
+LG+ G+
Sbjct: 146 HDKLGLEGI 154
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG + EG+LGLG P ++ L VP+A ++CGG+ T+V+++ G
Sbjct: 157 ELYAWGSNR-EGQLGLGSYTTTEIK-----PKRISTLAAVPIAFIACGGYHTIVISKSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N+ +LG D P L L + ++ G S+ LT DG VF+ G G
Sbjct: 211 VFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGM 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH T N+ +P + L VT I+CG T A V +G++Y WG QLG
Sbjct: 271 YGQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
++ WG G LGLG N + +P +V + V ++CG +T+ +T+EG++
Sbjct: 1 MFCWG-STIHGELGLGGIEDEN----IFMPREVDFIEASNVEQIACGENYTVAITKEGKV 55
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++ G N +LG + +L+P L +IA G H+LA+ + G++FSWG +
Sbjct: 56 YSCGNNDYGQLGHEK--ARKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMN 113
Query: 121 GQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +S ++VP +I+ L + IACG S A+T G+LY WG+ ++ QLG+
Sbjct: 114 GQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGL 171
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPV-AAVSCGGFFTMVLTEEGQ 59
+L++WG + G+LGL +P +K L V ++CG ++ LT +G+
Sbjct: 104 QLFSWGCNMN-GQLGLNSVDCTER-----VPRMIKVLGTNVIVQIACGTEHSIALTNDGE 157
Query: 60 LWNWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L+ WG+N +LG G KPK + L V I IA GGYH++ ++ G VFSWG
Sbjct: 158 LYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG + Q + +P + L + V + CG S +T G ++ G QLG
Sbjct: 218 TFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLG 275
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 80/140 (57%), Gaps = 10/140 (7%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRG-----DRVGGWKPKLLPNLVDVRIIQIAN 98
++CG T+ + E GQL++WG N N +LG +RV P+++ L I+QIA
Sbjct: 89 IACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERV----PRMIKVLGTNVIVQIAC 144
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
G HS+ALT+DG++++WG GQLG S+T + P I LA + IACGG +
Sbjct: 145 GTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIV 204
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
+++ G ++ WG QLG+
Sbjct: 205 ISKSGAVFSWGRNTFGQLGL 224
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WGR+ G+LGL N+ ++P +++ L V +CG F++ LT +G +
Sbjct: 211 VFSWGRNTF-GQLGL------NDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA +LG G+ P+ + L+ + QI+ G H+LAL G+V++WG GG
Sbjct: 264 FTCGAGMYGQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG+ +Q+ P V+
Sbjct: 324 AGQLGNRASQSATTPQVV 341
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 60 LWNWGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG+ + ELG G + + P+ + + + QIA G +++A+T +GKV+S G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH + +K +I L IACG + AV E G+L+ WG + QLG+
Sbjct: 61 NDYGQLGHE--KARKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGL 118
Query: 178 PGLPVVQPCP 187
+ + P
Sbjct: 119 NSVDCTERVP 128
>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6 [Sarcophilus harrisii]
Length = 1032
Score = 99.0 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 57/152 (37%), Positives = 86/152 (56%), Gaps = 3/152 (1%)
Query: 31 PSKVKALPVPVA-AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNL 88
P+ ++AL V +VSCG ++ + + G++++WG+ S +LG + PK + L
Sbjct: 80 PAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSRGQLGIKEVKDQCSIPKNIAAL 139
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTH 147
+IIQ++ G YHS+ALT DGKVFSWG HGQLG +Q P + +L +
Sbjct: 140 SRDKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQLGLGTNFPSQASPQRVNSLDGIPLAQ 199
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A GGS S A++ G Y WG K+ QL + G
Sbjct: 200 VAAGGSHSFALSLSGTSYGWGRNKEGQLALSG 231
Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 17/183 (9%)
Query: 3 YTWGRDEGEGRLGLGPGRGPN-------EAGGLSIPSKVKALPVPVAAVSCGGFFTMVLT 55
Y WG D +LG+ GR + E L V+A +CG +++L
Sbjct: 3 YCWG-DNSFRQLGINAGRRASPRVVRCREGASLGGQQIVQA--------ACGERHSLLLL 53
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
+G +W+ G NS +LGR + +P + L ++ ++ G HSLA+ G+++SW
Sbjct: 54 ADGTVWSCGNNSYGQLGRKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSW 113
Query: 116 GYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G G GQLG ++Q +P I AL+ + + ++CG S A+T+ GK++ WG+ Q
Sbjct: 114 GSGSRGQLGIKEVKDQCSIPKNIAALSRDKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQ 173
Query: 175 LGV 177
LG+
Sbjct: 174 LGL 176
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
+Y+WG G+LG+ + SIP + AL + VSCG + ++ LT++G++
Sbjct: 110 IYSWGSGS-RGQLGIKEVKDQ-----CSIPKNIAALSRDKIIQVSCGHYHSIALTQDGKV 163
Query: 61 WNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG N + +LG G P+ + +L + + Q+A GG HS AL+ G + WG
Sbjct: 164 FSWGDNDHGQLGLGTNFPSQASPQRVNSLDGIPLAQVAAGGSHSFALSLSGTSYGWGRNK 223
Query: 120 HGQLGHS 126
GQL S
Sbjct: 224 EGQLALS 230
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 21/188 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LGLG P++A P +V +L +P+A V+ GG + L+ G
Sbjct: 162 KVFSWG-DNDHGQLGLGTNF-PSQAS----PQRVNSLDGIPLAQVAAGGSHSFALSLSGT 215
Query: 60 LWNWGANSNYELGRGDRVGG--------WKPKLLPNLVDVRIIQIANGGYHSLALTD--- 108
+ WG N +L + W I+ G L +
Sbjct: 216 SYGWGRNKEGQLALSGKNASVVSINYCIWHEAEALTCKRSNSIKEFQGLKELLNRSRQIA 275
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMW 167
DGKV ++G GQLGH + P ++E+ E + IACG T A G++ +
Sbjct: 276 DGKVLTFGSNNSGQLGHGLITKPRGPQIVESA--ELFSQIACGSHHTLAYACTSGQVLSF 333
Query: 168 GNAKDSQL 175
G L
Sbjct: 334 GCGSQRHL 341
>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Callithrix jacchus]
Length = 556
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 64 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIACLSYGSGPHIV 117
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 118 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 177
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ P + L ++ V IACG AV + G++Y+WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYN 237
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 238 GNGQLGL 244
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 177 EVFAWGYNNS-GQVGSGSTVNQPTPRRVTG-CLQNKV------VVTIACGQMCCMAVVDS 228
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 229 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 288
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 289 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 348
Query: 177 VPGL 180
+P L
Sbjct: 349 LPHL 352
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 767 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 819
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 820 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 879
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 880 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 918
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 615 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 669
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 670 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 729
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 730 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 779
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 1622 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 1681
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 1682 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 1741
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 1742 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 1771
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 553 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 605
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 606 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 665
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 666 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 725
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 712 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 764
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 765 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 824
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 825 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 883
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 1704 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 1756
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 1757 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 1816
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 1817 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 1875
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 1759 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 1811
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 1812 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 1871
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 1872 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1908
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 1545 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 1604
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 1605 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 1664
Query: 176 G 176
G
Sbjct: 1665 G 1665
Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 536 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 594
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 595 KSLFAVTVEGKVYACGEATNGRLGL 619
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLNGKKIACLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 233 GNGQLGL 239
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 172 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 223
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 343
Query: 177 VPGL 180
+P L
Sbjct: 344 LPHL 347
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 210 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 262
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 263 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 322
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 323 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 361
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
++Y+ G + GRLGLG +G + IP ++ AL V AV GG LT +
Sbjct: 48 KVYSCG-EATNGRLGLG-----MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 101
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG + +LG R+ KP+L+ L RI IA G HS ALT G++++WG
Sbjct: 102 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 161
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQL 175
G +G+LGH Q P +++ L V +ACG + + A+T++G ++ WG+ +L
Sbjct: 162 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 221
Query: 176 G 176
G
Sbjct: 222 G 222
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 1066 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIESL 1125
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 1126 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDI 1185
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 1186 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 1215
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 85/153 (55%), Gaps = 4/153 (2%)
Query: 28 LSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLL 85
+ +PS + L + V V+ G +T EG++++ G +N LG G G P+ +
Sbjct: 16 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI 75
Query: 86 PNLVD--VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
L V+ + + +GG H+ ALT DGKVFSWG G G+LGH N P +IEAL +
Sbjct: 76 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTK 135
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ IACG S SAA+T G+LY WG + +LG
Sbjct: 136 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 168
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 155 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 207
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 208 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 267
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 268 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 326
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 1148 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD 1200
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 1201 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 1260
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 1261 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 1319
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 1203 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 1255
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 1256 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 1315
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 1316 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1352
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 989 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 1048
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG AKD +L
Sbjct: 1049 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKL 1108
Query: 176 G 176
G
Sbjct: 1109 G 1109
>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
Length = 527
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 101/181 (55%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEG 58
E++ G + G LGLG + E P ++ AL + ++S G G + T +G
Sbjct: 42 EVFALGTN-CSGCLGLGDLQSTIE------PRRIDALCGKKIVSLSYGTGPHVAIATADG 94
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++++WG N +LG G G P L+ NL+ R+I++A G +H++ALT DG+VF+WGY
Sbjct: 95 EVFSWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGY 154
Query: 118 GGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G T NQ P V L ++ V +IACG S AV + G++Y WG + QLG
Sbjct: 155 NNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLG 214
Query: 177 V 177
+
Sbjct: 215 L 215
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++ WG + G++G G +S + KA V ++CG +M + + G++
Sbjct: 148 EVFAWGYNNS-GQVGSGSTANQPTPRRVSSCLQNKA----VVNIACGQLCSMAVLDSGEI 202
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG N N +LG G+ P + L V +IQ+A G H+LALTD+G V++WG +
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSY 262
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG NQ +P +I + AC S TSAA T+ G++ MWG + + P
Sbjct: 263 GQLGTGNKCNQALPTLINTDKERMAEVAACHTSHTSAAKTQSGQVLMWGQCRGQAVASPH 322
Query: 180 L 180
L
Sbjct: 323 L 323
>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
Length = 4220
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 90/160 (56%), Gaps = 8/160 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG RG +E G S+P+ V+ L V V+CG F++ L+ G +
Sbjct: 2636 VWSWG-DGDFGKLG----RGGSE--GCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLV 2688
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G+ KP+++ L +I+ +A G H LA+TD G+VF+WG H
Sbjct: 2689 WTWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDH 2748
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
GQ G++ T + P ++ L + +T +ACG S S A E
Sbjct: 2749 GQQGNNTTTVNRRPQLVNGLEGQKITRVACGSSHSIAWAE 2788
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLGP + +++P +++ L V +V GG M LT EG+L++WG +
Sbjct: 2484 GRLGLGP-----LSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGED 2538
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R+ PKL+ + ++ G HS A+ G++++WG G +G+LGH
Sbjct: 2539 GKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGRLGHGDN 2598
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
P +++ V IACG + + A+T+ G ++ WG+ +LG
Sbjct: 2599 YTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLG 2648
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
ELYTWG+ GR G LG G ++ +P V+AL V V+CG T+ LT+
Sbjct: 3513 ELYTWGK----GRYGRLGHGDSEDQL----LPKVVEALRGNRVIDVACGSGDAQTLCLTD 3564
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L+ + + ++ G S+ALT G V++WG
Sbjct: 3565 DDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWG 3624
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P + AL + V IA G A T+ G++Y WG+ + QLG
Sbjct: 3625 KGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLG 3684
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWGR GRLG G +P V L + V+CG T+ ++
Sbjct: 89 ELYTWGRG-NYGRLGHGSSEDQ------LVPVLVSGLRGHHIIDVACGSGDAHTLAAADD 141
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +W+WG +LGRG G PK + L + + ++ G SLALT DG V++WG
Sbjct: 142 GTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGK 201
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LGH + + P ++EAL + V ++ G A+T+ G++Y WG QLG
Sbjct: 202 GEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLG 260
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E+Y+WG +G G+LG G P P GL+ ++ +SCG + +T E
Sbjct: 37 EVYSWGSGDG-GKLGHGDTSPREEPTLVTGLAGKQVIR--------ISCGSTHSAAVTSE 87
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSW 115
G+L+ WG + LG G P L+ L II +A +G H+LA DDG V+SW
Sbjct: 88 GELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSW 147
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G +G+LG + K P IE L V + CG S A+T G ++ WG + +L
Sbjct: 148 GDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRL 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G IP KV++L + V+ V CG F++ LT G +
Sbjct: 3568 VWSWG-DGDYGKLGRGG------SDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAV 3620
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG Y LG G +PK + L ++I IA G H +A TD G+V++WG
Sbjct: 3621 YTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDNDE 3680
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T P ++ AL + ++ +ACG + + A
Sbjct: 3681 GQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIA 3717
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V AV GG M L+ +G +++WG + +LG G+R +P+++ L +I I+
Sbjct: 3441 VRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISC 3500
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSA 156
GG HS +T + ++++WG G +G+LGH +++Q +P V+EAL V +ACG + +
Sbjct: 3501 GGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTL 3560
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
+T+ ++ WG+ +LG
Sbjct: 3561 CLTDDDCVWSWGDGDYGKLG 3580
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V V + G F + LT EG++++WG+ +LG GD +P L+ L ++I+I+
Sbjct: 18 VQVVTHTDGKHF-LALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISC 76
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSA 156
G HS A+T +G++++WG G +G+LGH +++Q VP+++ L + +ACG + +
Sbjct: 77 GSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTL 136
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
A + G ++ WG+ +LG
Sbjct: 137 AAADDGTVWSWGDGDYGKLG 156
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G P ++ L + V V CG F++ LT +G +
Sbjct: 144 VWSWG-DGDYGKLGRGG------SDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSV 196
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G PKL+ L ++ ++ G H LALTD G+V+ WG
Sbjct: 197 WTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQ 256
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG Q + P ++ LA + + IACG + S A
Sbjct: 257 GQLGDIDCQIRPEPTLVSGLASKGIVGIACGPAQSFA 293
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGF--FTMVLTEE 57
ELYTWG E GRLG G + P KV++ V ++CG T+ LT++
Sbjct: 2581 ELYTWGLGE-YGRLGHGDNYTHLK------PKKVQSFTSHRVIDIACGSRDAQTLALTDD 2633
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +W+WG +LGRG G P + L + ++A G SLAL+ G V++WG
Sbjct: 2634 GTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGK 2693
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P +++ L + + +A G AVT+ G+++ WG+ Q G
Sbjct: 2694 GDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQG 2752
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQ 95
+ V ++ G ++ +G+++ G ++N LG G P+ + NL VR +
Sbjct: 2454 LKVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVS 2513
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTS 155
+ +GG H++ALT +GK+FSWG G G+LGH N P +I+ V ++CG S S
Sbjct: 2514 VHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHS 2573
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
AA+ G+LY WG + +LG
Sbjct: 2574 AAILSSGELYTWGLGEYGRLG 2594
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 93 IIQIAN--GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
I+Q+ G H LALT +G+V+SWG G G+LGH T ++ P ++ LA + V I+C
Sbjct: 17 IVQVVTHTDGKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISC 76
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + SAAVT +G+LY WG +LG
Sbjct: 77 GSTHSAAVTSEGELYTWGRGNYGRLG 102
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
TM G ++ WG N +LG + P+ + L +R +QI G A+T +G
Sbjct: 3347 TMTWGGSGTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEG 3406
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWG 168
KV++ GYG G+LG T ++E+L V +A GG + A++ G +Y WG
Sbjct: 3407 KVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWG 3466
Query: 169 NAKDSQLG 176
D +LG
Sbjct: 3467 EGDDGKLG 3474
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 11/123 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++TWG+ EG RLG G + P V+AL V VS G + LT+ G++
Sbjct: 196 VWTWGKGEG-FRLGHG------TEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEV 248
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG N +LG D +P L+ L I+ IA G S A + G+ W G
Sbjct: 249 YCWGRNDQGQLGDIDCQIRPEPTLVSGLASKGIVGIACGPAQSFAWSCAGQ---WSVGTR 305
Query: 121 GQL 123
Q
Sbjct: 306 LQF 308
Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
KVF WG QLG KVP++ E + V IA G T AV+ GK++ G +
Sbjct: 2422 KVFVWGLNDKDQLGGLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACGES 2481
Query: 171 KDSQLGV 177
+ +LG+
Sbjct: 2482 TNGRLGL 2488
>gi|74140640|dbj|BAB27358.3| unnamed protein product [Mus musculus]
Length = 576
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 21/193 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS-IPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
+++ WG EG+LG+G E +S +P+K+KAL + + VSCG + ++ L+E+G
Sbjct: 21 KVFAWGAGS-EGQLGIG------EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDG 73
Query: 59 QLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+++WG NS +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 74 HVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGS 133
Query: 118 GGHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
GQL G+ + P I AL + V +I+CG +A +TE+G+++ +G Q
Sbjct: 134 NRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQ 193
Query: 175 LGVPGLPVVQPCP 187
L QP P
Sbjct: 194 L--------QPSP 198
Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 50/141 (35%), Positives = 84/141 (59%), Gaps = 2/141 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANG 99
V VSCG ++ + +G+++ WGA S +LG G+ + + P + L ++IIQ++ G
Sbjct: 3 VDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCG 62
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
YHSLAL++DG VFSWG GQLG +++Q +P +++L + +A GG+ S A+
Sbjct: 63 HYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL 122
Query: 159 TEKGKLYMWGNAKDSQLGVPG 179
+ G + WG+ + QL + G
Sbjct: 123 SLTGTSFGWGSNRSGQLALSG 143
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 16/193 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WGR+ EG+LGLG + +IP KVK+L +P+A V+ GG + L+ G
Sbjct: 75 VFSWGRNS-EGQLGLG-----KNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTS 128
Query: 61 WNWGANSNYELG-RGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+ WG+N + +L G++V +KP + L ++ +I I+ G H+ LT++G+VF++G
Sbjct: 129 FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG 188
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLG 176
GQL S Q+ P +IE + V+ I C T A V G++ G
Sbjct: 189 NSSGQLQPSPRSGQRGPQLIEGIGGR-VSQIECASYHTIAYVYTTGQVVSLGRGPSHTSN 247
Query: 177 VPGLPVVQPCPVE 189
P Q P E
Sbjct: 248 ----PTHQEAPAE 256
>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
domestica]
Length = 1016
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 3/152 (1%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P++++AL + +VSCG ++ + +EG++++WG+ S+ +LG R + PK + L
Sbjct: 80 PAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDEL 139
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTH 147
+IIQ++ G YHS+AL DG+VFSWG HGQLG +Q P +++L +
Sbjct: 140 SSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQ 199
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A GG+ S A++ G Y WG QL + G
Sbjct: 200 VAAGGAHSFALSFSGTSYGWGRNNAGQLALSG 231
Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 56/181 (30%), Positives = 97/181 (53%), Gaps = 12/181 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG +G+LG+ + + SIP K+ L + VSCG + ++ L ++G++
Sbjct: 110 VFSWGSGS-DGQLGIREFKKLS-----SIPKKIDELSSFKIIQVSCGHYHSIALAQDGRV 163
Query: 61 WNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG N++ +LG G+ V P+ + +L + + Q+A GG HS AL+ G + WG
Sbjct: 164 FSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNN 223
Query: 120 HGQLGHSFTQNQ----KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL S + P I L VT+I+CG +A +T+ GK++ +G+ QL
Sbjct: 224 AGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQL 283
Query: 176 G 176
G
Sbjct: 284 G 284
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 21 GPNEAGGLSIPS--KVKALPV-----------PVAAVSCGGFFTMVLTEEGQLWNWGANS 67
G N +G L IP+ + KA V + +CG +++L +G +W+ G NS
Sbjct: 6 GDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCGNNS 65
Query: 68 NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HS 126
+LGR +P + L I+ ++ G HSLA+ +G+VFSWG G GQLG
Sbjct: 66 CGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGIRE 125
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
F + +P I+ L+ + ++CG S A+ + G+++ WG QLG+
Sbjct: 126 FKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGL 176
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG++ G+LGLG P++A P VK+L +P+A V+ GG + L+ G
Sbjct: 163 VFSWGKNN-HGQLGLGENV-PSQAS----PQWVKSLDGIPLAQVAAGGAHSFALSFSGTS 216
Query: 61 WNWGANSNYELGRGDRVGGW----KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG N+ +L + KP + L +++ I+ G H+ LT DGKVF++G
Sbjct: 217 YGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFG 276
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG K P V+++ + IACG + A +
Sbjct: 277 SNDSGQLGRQLISGMKGPQVVDSAVS--FSQIACGSYHTLAYS 317
Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELG----RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
WG NS+ +LG + + + +L + ++Q A G HSL L DG V+S G
Sbjct: 5 WGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCGNN 64
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG Q P I+AL + + ++CG S A+ ++G+++ WG+ D QLG+
Sbjct: 65 SCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGI 123
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 11/122 (9%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLW 61
Y WGR+ G+L L + E +S P + L + V +SCG T VLT++G+++
Sbjct: 217 YGWGRNNA-GQLALSGKKESAEQ--ISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVF 273
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALT-DDGKVFSWGYG 118
+G+N + +LGR + G K P +VD V QIA G YH+LA + G+V S+G G
Sbjct: 274 TFGSNDSGQLGR-QLISGMKG---PQVVDSAVSFSQIACGSYHTLAYSCTTGQVISFGCG 329
Query: 119 GH 120
Sbjct: 330 SQ 331
>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 85 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIACLSYGSGPHIV 138
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 139 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 198
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ P + L ++ V IACG AV + G++Y+WG
Sbjct: 199 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYN 258
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 259 GNGQLGL 265
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 198 EVFAWGYNNS-GQVGSGSTVNQPTPRRVTG-CLQNKV------VVTIACGQMCCMAVVDS 249
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 250 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 309
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 310 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 369
Query: 177 VPGL 180
+P L
Sbjct: 370 LPHL 373
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG E +G+LG G L P V+AL + V+CG + ++ +G+
Sbjct: 839 KVFSWGEGE-DGKLGHG------NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGE 891
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD KPKL+ L R++Q+A G +LALT+DG VFSWG
Sbjct: 892 LYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 951
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LG ++ P IE L+ V I CG S A+T G+++ WG +LG
Sbjct: 952 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG 1010
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG + +P ++ L V AV GG + LT +G++++WG +
Sbjct: 795 GRLGLGVTHN------VPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED 848
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R KP+L+ L +I +A G HS A++ G++++WG G +G+LGH
Sbjct: 849 GKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 908
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P ++ ALA V +ACG + + A+TE G ++ WG+ +LG
Sbjct: 909 ATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 958
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G + P +++ L + V + CG F++ LT G++
Sbjct: 946 VFSWG-DGDFGKLGRGGSEGSD------TPHEIERLSGIGVVQIECGAQFSLALTRAGEV 998
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP+ + L R+I +A G H LA+TD G+V++WG H
Sbjct: 999 WTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDH 1058
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P ++ L FV +ACG S S A
Sbjct: 1059 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 1095
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + A L P V AL V V+CG T+ LTE+
Sbjct: 891 ELYTWGLGE-YGRLGHG-----DNATQLK-PKLVTALAGRRVVQVACGSRDAQTLALTED 943
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L + ++QI G SLALT G+V++WG
Sbjct: 944 GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGK 1003
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I L V H+A G AVT+ G++Y WG+ Q G
Sbjct: 1004 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 1062
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V AV+ GG + LT EG+++ WG + +LG G+R+ +PKL+ +L + + IA
Sbjct: 1884 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIAC 1943
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSA 156
G HS A+T G V +WG G +G+LGH +++Q P ++EAL IACG + +
Sbjct: 1944 GSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTL 2003
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
+T+ ++ WG+ +LG
Sbjct: 2004 CITDDDNVWSWGDGDYGKLG 2023
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT+ G +
Sbjct: 2011 VWSWG-DGDYGKLGRG------GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAV 2063
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L +II IA G H +A +D G+V++WG
Sbjct: 2064 YTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDE 2123
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++ AL + + + CG + + A++
Sbjct: 2124 GQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 2162
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+ TWG+ GRLG G + +A+ + A G T+ +T++ +
Sbjct: 1956 HVLTWGKGR-YGRLGHGDSEDQLRPKLVEALLGYRAIDI---ACGSGDAQTLCITDDDNV 2011
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG G
Sbjct: 2012 WSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDF 2071
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+LGH + + P + AL + + IA G A ++ G++Y WG+ + QLG +
Sbjct: 2072 HRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTV 2131
Query: 181 PVVQ 184
+Q
Sbjct: 2132 TAIQ 2135
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 63 WGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N +LG +G +V P + +R I IA G ++ DGKV++ G G +
Sbjct: 737 WGLNDKEQLGGLKGSKVK--VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTN 794
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T N +P + L V +A GG + A+T GK++ WG +D +LG
Sbjct: 795 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 852
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 60 LWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG N +LG G R+ P L +R +Q+A G A+T DGK+F+ GY
Sbjct: 1799 IYGWGHNHRGQLGGLEGSRIK--TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 1856
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG + + +P ++ +L FV +A GG A+T +G++Y WG +D +L
Sbjct: 1857 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 1916
Query: 176 G 176
G
Sbjct: 1917 G 1917
>gi|355694474|gb|AER99681.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 306
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 56 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 108
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 109 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 168
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 169 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 207
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 1 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 53
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 54 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 113
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 114 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 172
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG +P K++A V V ++ G T +TE+G
Sbjct: 138 EVQSWGRNQ-NGQLGLGTTEDS------LLPQKIQAFESVCVKMIAAGAEHTAAVTEDGD 190
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + ++ +++ +A G H++ ++D G ++++G+
Sbjct: 191 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSK 250
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH ++ VP +EAL D ++ I+ G + A+T +GKLY WG K Q+GV
Sbjct: 251 YGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGV 308
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTE-EGQ 59
L +WGR E +G+LG G +A +P+ + P + +V CG T +E E Q
Sbjct: 34 LCSWGRGE-DGQLGHG------DAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQ 86
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG LG G+ + P+ + L ++I QIA G H LA+T G+V SWG
Sbjct: 87 VYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQ 146
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG T++ +P I+A V IA G +AAVTE G LY WG + LG+
Sbjct: 147 NGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 204
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GRLG G + + P VKAL + + ++CG + +T G+
Sbjct: 86 QVYSWGWGD-FGRLGHG------NSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGE 138
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G P+ + V + IA G H+ A+T+DG ++ WG+G
Sbjct: 139 VQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGR 198
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ +P + ++ E + +ACG + V++ G LY +G +K QLG
Sbjct: 199 YGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLG 255
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S+ + + P V VS G ++ L L +WG + +LG GD P +L
Sbjct: 3 SVMAAPDSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGF 62
Query: 89 VDVRIIQIANGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
I + G H+ A ++D +V+SWG+G G+LGH + + P ++AL +
Sbjct: 63 DAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQ 122
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IACG S AVT G++ WG ++ QLG+
Sbjct: 123 IACGDSHCLAVTMAGEVQSWGRNQNGQLGL 152
>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
Length = 1020
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 15/188 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG +P ++AL + V VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRRGAQRG-------ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L ++IIQ++ G YHSLAL+ D +VFSWG HGQ
Sbjct: 102 GSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--L 180
LG F +Q P + +L + +A GG+ S A++ G + WG+ QL + G +
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNV 220
Query: 181 PVVQPCPV 188
PV P+
Sbjct: 221 PVQSNKPL 228
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 13/186 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G E +S P K+ L + + VSCG + ++ L+++ Q
Sbjct: 96 VFAWGAGS-EGQLGIG------EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQ 148
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSN 208
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G + P+ + AL + V +I+CG + +A +T+ GK++ +G+ + QL
Sbjct: 209 SSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Query: 176 GVPGLP 181
G P
Sbjct: 269 GYSPTP 274
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 100/175 (57%), Gaps = 12/175 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKNS-HGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS+ +L GR V KP + L ++ ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNA 170
GQLG+S T ++ P ++E + D V+ I CG T A V G++ +G+
Sbjct: 262 DNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVVSFGHG 315
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + P I L + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG +S EL R G +LL Q A+G HSL L + +V S G GQ
Sbjct: 5 WGTDSR-ELQRRRTAGSPGAELL---------QAASGERHSLLLLTNHRVLSCGDNSRGQ 54
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
LG Q ++P I+AL V ++CG S AV KG+++ WG + QLG+
Sbjct: 55 LGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109
>gi|351542219|ref|NP_001084549.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 80/128 (62%), Gaps = 2/128 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDG 110
++ E+G++++WG N +LG G+ + G P ++ L+ ++I++A G +HS+ALT DG
Sbjct: 158 LLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDG 217
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VFSWGY GQ+G T NQ VP V +L + V IA G ++S A+T+ G +Y WG
Sbjct: 218 EVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVVVSIAAGQTSSMAITDNGHVYGWGY 277
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 278 NGTGQLGL 285
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG + G +LG G G + ++ L V V+CG +M LT +G++
Sbjct: 165 EVYSWGHN-GYSQLG----NGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDGEV 219
Query: 61 WNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG N++ ++G G P K+ +L ++ IA G S+A+TD+G V+ WGY G
Sbjct: 220 FSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVVVSIAAGQTSSMAITDNGHVYGWGYNG 279
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG T NQ +P + + + G + S A++++G LY WG QLG+ G
Sbjct: 280 TGQLGLGNTGNQLMPCRLVFAQPVCIIQVVLGYAHSLALSDQGVLYAWGANSHGQLGI-G 338
Query: 180 LPVVQPCPVE 189
Q PV+
Sbjct: 339 NKSNQTVPVK 348
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 13/184 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA--LPVPVAAVSCGGFFTMVLTEEG 58
E+++WG + G++G G S+P KV + V +++ G +M +T+ G
Sbjct: 218 EVFSWGYNNS-GQVGSGT------TANQSVPRKVSSSLQSKVVVSIAAGQTSSMAITDNG 270
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG N +LG G+ P L V IIQ+ G HSLAL+D G +++WG
Sbjct: 271 HVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPVCIIQVVLGYAHSLALSDQGVLYAWGAN 330
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST--SAAVTEKGKLYMWGNAKDSQLG 176
HGQLG NQ VP ++ +E + +A ST SAA ++ G++YMWG + L
Sbjct: 331 SHGQLGIGNKSNQTVP--VKVGTNERMVEVAACHSTNISAAKSQSGQVYMWGLCRGQCLL 388
Query: 177 VPGL 180
P L
Sbjct: 389 SPHL 392
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDGKVF 113
T+ +++ +G NS+ LG GD P+ L L +I ++ G G H L +DG+V+
Sbjct: 108 TQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVLCGKKIKDLSYGSGPHILLCNEDGEVY 167
Query: 114 SWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
SWG+ G+ QLG+ T P+ V L + V +ACG S A+T G+++ WG
Sbjct: 168 SWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDGEVFSWGYNNS 227
Query: 173 SQLG 176
Q+G
Sbjct: 228 GQVG 231
>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Pan troglodytes]
Length = 1020
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 15/188 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG +P ++AL + V VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRRGAQRG-------ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L ++IIQ++ G YHSLAL+ D +VFSWG HGQ
Sbjct: 102 GSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--L 180
LG F +Q P + +L + +A GG+ S A++ G + WG+ QL + G +
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNV 220
Query: 181 PVVQPCPV 188
PV P+
Sbjct: 221 PVQSNKPL 228
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 13/186 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G E +S P K+ L + + VSCG + ++ L+++ Q
Sbjct: 96 VFAWGAGS-EGQLGIG------EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQ 148
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSN 208
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G + P+ + AL + V +I+CG + +A +T+ GK++ +G+ + QL
Sbjct: 209 SSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Query: 176 GVPGLP 181
G P
Sbjct: 269 GYSPTP 274
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 100/175 (57%), Gaps = 12/175 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKNS-HGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS+ +L GR V KP + L ++ ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNA 170
GQLG+S T ++ P ++E + D V+ I CG T A V G++ +G+
Sbjct: 262 DNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVVSFGHG 315
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + P I L + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG +S EL R G +LL Q A+G HSL L + +V S G GQ
Sbjct: 5 WGTDSR-ELQRRRTAGSPGAELL---------QAASGERHSLLLLTNHRVLSCGDNSRGQ 54
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
LG Q ++P I+AL V ++CG S AV KG+++ WG + QLG+
Sbjct: 55 LGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109
>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Pan troglodytes]
Length = 984
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 15/188 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG +P ++AL + V VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRRGAQRG-------ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L ++IIQ++ G YHSLAL+ D +VFSWG HGQ
Sbjct: 102 GSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--L 180
LG F +Q P + +L + +A GG+ S A++ G + WG+ QL + G +
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNV 220
Query: 181 PVVQPCPV 188
PV P+
Sbjct: 221 PVQSNKPL 228
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 13/186 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G E +S P K+ L + + VSCG + ++ L+++ Q
Sbjct: 96 VFAWGAGS-EGQLGIG------EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQ 148
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSN 208
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G + P+ + AL + V +I+CG + +A +T+ GK++ +G+ + QL
Sbjct: 209 SSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Query: 176 GVPGLP 181
G P
Sbjct: 269 GYSPTP 274
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 100/175 (57%), Gaps = 12/175 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKNS-HGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS+ +L GR V KP + L ++ ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNA 170
GQLG+S T ++ P ++E + D V+ I CG T A V G++ +G+
Sbjct: 262 DNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVVSFGHG 315
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + P I L + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG +S EL R G +LL Q A+G HSL L + +V S G GQ
Sbjct: 5 WGTDSR-ELQRRRTAGSPGAELL---------QAASGERHSLLLLTNHRVLSCGDNSRGQ 54
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
LG Q ++P I+AL V ++CG S AV KG+++ WG + QLG+
Sbjct: 55 LGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 100/179 (55%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG + P +K+L +P ++ GG + LT G
Sbjct: 157 EVFSWGQNK-HGQLGLGYDLKKQTS-----PQLIKSLLGIPFGQIAAGGAHSFALTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I+ G H+ ALT +G VF++G GG
Sbjct: 211 VFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG+
Sbjct: 271 YGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGM 329
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG ++ +LG G P+ + +L
Sbjct: 75 PEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTH 147
DV+I+Q+A G YHSLAL+ +VFSWG HGQLG + + Q P +I++L
Sbjct: 135 SDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IA GG+ S A+T G ++ WG K QLG+
Sbjct: 195 IAAGGAHSFALTLSGAVFGWGRNKFGQLGL 224
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L L V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G +P+ + L I+ ++ G H+L L D G+V++WG+
Sbjct: 57 TCGCN---DLGQLGHEKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAAD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG T+ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGL 171
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ + + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + + +KG++Y WG A D QLG+PG
Sbjct: 64 GQLGHE--KSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPG 120
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + +SCG T LT+EG +
Sbjct: 211 VFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGMGSTSNRKSPFPVK 342
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 100/179 (55%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG + P +K+L +P ++ GG + LT G
Sbjct: 157 EVFSWGQNK-HGQLGLGYDLKKQTS-----PQLIKSLLGIPFGQIAAGGAHSFALTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I+ G H+ ALT +G VF++G GG
Sbjct: 211 VFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG+
Sbjct: 271 YGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGM 329
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG ++ +LG G P+ + +L
Sbjct: 75 PEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTH 147
DV+I+Q+A G YHSLAL+ +VFSWG HGQLG + + Q P +I++L
Sbjct: 135 SDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IA GG+ S A+T G ++ WG K QLG+
Sbjct: 195 IAAGGAHSFALTLSGAVFGWGRNKFGQLGL 224
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L L V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G +P+ + L I+ ++ G H+L L D G+V++WG+
Sbjct: 57 TCGCN---DLGQLGHEKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAAD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG T+ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGL 171
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ + + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + + +KG++Y WG A D QLG+PG
Sbjct: 64 GQLGHE--KSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPG 120
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + +SCG T LT+EG +
Sbjct: 211 VFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGMGSTSNRKSPFPVK 342
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 2870 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2922
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 2923 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 2982
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 2983 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3021
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 2718 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2772
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 2773 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2832
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 2833 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 2882
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 3725 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 3784
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 3785 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 3844
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 3845 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3874
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2656 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2708
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 2709 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 2768
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 2769 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 2828
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 2815 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 2867
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 2868 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2927
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 2928 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2986
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 3807 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 3859
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 3860 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 3919
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 3920 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 3978
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 3862 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3914
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 3915 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 3974
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 3975 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4011
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 408 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 457
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 458 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 517
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 518 SAAITAEGELYTWGRGNYGRLG 539
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 72/128 (56%), Gaps = 7/128 (5%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 451 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 509
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 510 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 569
Query: 153 STSAAVTE 160
+ + AVTE
Sbjct: 570 AQTLAVTE 577
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3648 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3707
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3708 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 3767
Query: 176 G 176
G
Sbjct: 3768 G 3768
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2639 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2697
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 2698 KSLFAVTVEGKVYACGEATNGRLGL 2722
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
++I +A G H LALT+D +V SWG Q + + P + L + + I CG
Sbjct: 681 KVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDAKHIMGITCG 740
Query: 152 GSTSAA 157
+ S A
Sbjct: 741 PAQSCA 746
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 108/184 (58%), Gaps = 11/184 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y G ++ G+LG PN+ P ++ +L + +SCG ++ LT GQ
Sbjct: 56 KMYACGNND-HGQLGHDLDTLPNKR-----PQRLTSLENYIITCISCGTAHSLALTNWGQ 109
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG+N+ +LG G P+++ + ++QIA+G YH LALT++G++++WG
Sbjct: 110 VFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSN 169
Query: 119 GHGQLGHSFTQNQKVPM--VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG T ++KVPM +I++LA + IACGG+ S AV++ G ++ WG QLG
Sbjct: 170 SYGQLGIG-TTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 228
Query: 177 VPGL 180
+ L
Sbjct: 229 LNDL 232
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALPVPVAAVSCGGFFTMVLTEEGQL 60
+Y WG + G LGLG E + +P K+ + V V CG T+ LT+EG++
Sbjct: 3 IYCWG-NTAHGELGLGGI----EEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKM 57
Query: 61 WNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ G N + +LG D + +P+ L +L + I I+ G HSLALT+ G+VFSWG
Sbjct: 58 YACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNA 117
Query: 120 HGQLGHSFTQ-NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH Q P +I+A+ + V IA G A+T G+LY WG+ QLG+
Sbjct: 118 VGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIG 177
Query: 179 GLPVVQPCPV 188
P P
Sbjct: 178 TTSEKVPMPT 187
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG + G+LG+G + + +P+ +++L VP+A ++CGG + +++ G
Sbjct: 162 ELYAWGSN-SYGQLGIG-----TTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGA 215
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + + I+ G S+ LT++G VF+ G G
Sbjct: 216 IFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGT 275
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH N+ VP + L +T IACG T A V +GK+Y +G QLG+
Sbjct: 276 FGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGI 334
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL N+ P++++ L + V +SCG F++ LT EG +
Sbjct: 216 IFGWGKNTF-GQLGL------NDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGV 268
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+ + L+ +I QIA G H+LA GK++ +G GG
Sbjct: 269 FTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGG 328
Query: 120 HGQLGHSFTQNQKVPMVIE 138
GQLG N P ++
Sbjct: 329 VGQLGIGMVGNHSTPQIVR 347
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 98/179 (54%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY G EG GRLGLG E + S+ + AV GG + LT++G+
Sbjct: 2642 KLYACG--EGTNGRLGLGDDNNVCEPKAIPFLSQ---FVIKKVAVHSGGKHALALTQDGK 2696
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG + +LG G+ + KPKL+ L RI IA G HS A+ +G++++WG G
Sbjct: 2697 VFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGE 2756
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+G+LGH T Q P +++AL + V +ACG + + A+T G +Y WG+ +LG
Sbjct: 2757 YGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLG 2815
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 99/180 (55%), Gaps = 14/180 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV--KALPVPVAAVSCGGFFTM-VLTEEG 58
+Y WG ++ + GL + L I S+V K P+ +A GG T+ ++++EG
Sbjct: 2591 VYVWGLNDKDQLGGLKGSKIK-----LPIYSEVLSKLKPIHIA----GGSKTLFIVSQEG 2641
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWG 116
+L+ G +N LG GD +PK +P L I ++A +GG H+LALT DGKVFSWG
Sbjct: 2642 KLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWG 2701
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH + P +IE L + + IACG SAA+ G+LY WG + +LG
Sbjct: 2702 EGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLG 2761
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG G + G P V L + V V CG F++ LT+ G++
Sbjct: 2803 VYSWG-DGDFGKLGRGG------SDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEV 2855
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G+ KP L+ L +II +A G H LA+TD G+V++WG H
Sbjct: 2856 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDH 2915
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P ++ L D V ++CG S S A
Sbjct: 2916 GQQGNGATSVNRKPSLVHDLEDARVNRVSCGSSHSIA 2952
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 7/191 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWGR GRLG G ++ ++ + +K V A G T+ +T G +
Sbjct: 219 ELYTWGRG-NYGRLGHG---NFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIV 274
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG +LGRG G PK++ L+D+ ++++ GG S ALT G+V++WG G
Sbjct: 275 FSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDA 334
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+LGH ++ + P VIE+L D+ + ++ G + A+TE +Y WG Q+
Sbjct: 335 YRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGWGRNDYGQIDPTLG 394
Query: 181 PVVQP---CPV 188
PVV CP
Sbjct: 395 PVVSEPTLCPT 405
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 95/179 (53%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + + P V+AL V V+CG TM LT +
Sbjct: 2748 ELYTWGLGE-YGRLGHG------DTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTD 2800
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G + P + L + +IQ+ G SLALT G+V++WG
Sbjct: 2801 GCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGK 2860
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 2861 GDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 2919
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P+ + A G + LT++G +++WG LG GD V +PKL+ +L+D I+ IA
Sbjct: 146 PITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVFIA 205
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STS 155
G +S AL+ G++++WG G +G+LGH + P ++ L V H+ACG S +
Sbjct: 206 CGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQT 265
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
VT G ++ WG+ +LG
Sbjct: 266 LCVTASGIVFSWGDGDYGKLG 286
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G P V K L + V V CGG F+ LT G++
Sbjct: 274 VFSWG-DGDYGKLGRGGTDGSK------TPKIVDKLLDINVVKVFCGGQFSAALTAHGEV 326
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG Y LG G PK++ +L D +I ++ G H LALT+D V+ WG +
Sbjct: 327 YTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGWGRNDY 386
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ+ + P + L+ + V +A G + S A
Sbjct: 387 GQIDPTLGPVVSEPTLCPTLSSKTVIGLASGPTQSFA 423
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V+ WG QLG K+P+ E L+ HIA G T V+++GKLY G
Sbjct: 2591 VYVWGLNDKDQLGGLKGSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGT 2650
Query: 172 DSQLGV 177
+ +LG+
Sbjct: 2651 NGRLGL 2656
>gi|23271234|gb|AAH38104.1| RCBTB1 protein [Homo sapiens]
Length = 355
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G ++ L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIATVQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 93/163 (57%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++ L + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQS--TLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIATVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDE-GEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEE 57
E++ WG + G+ +G G N+ P KV L + V ++CG +M + +
Sbjct: 148 EVFAWGYNNCGQ----VGSGSTANQP----TPRKVTNCLHIKRVVGIACGQTSSMAVLDN 199
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG N P I + V AC TSAA T+ G +YMWG + +
Sbjct: 260 NTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVI 319
Query: 177 VPGL 180
+P L
Sbjct: 320 LPHL 323
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVP--MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
V++WG+ G+ QLG+ T NQ + V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNG-TTNQGIATVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWG 153
Query: 169 NAKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 154 YNNCGQVG-SGSTANQPTP 171
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD+ +VF +G LG Q+ VP +E L + + ++ G G TE
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ VQ C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIATVQVC 122
>gi|321471075|gb|EFX82049.1| hypothetical protein DAPPUDRAFT_210805 [Daphnia pulex]
Length = 510
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 95/181 (52%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEEG 58
E++ WG++ G G+ G G G S+P +V + V A++CG +M L ++G
Sbjct: 126 EVFAWGQNNG-GQCGSGTTTGQ------SVPRRVTSGIGGHKVVAIACGQLTSMALLDDG 178
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L+ WG N N ELG G+ P + NL V I QI G H LALTD G++++WG
Sbjct: 179 DLYGWGYNGNGELGIGNNNNQHNPVRVSNLHKVFITQIVCGFAHCLALTDQGELYAWGAN 238
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG + + P+++ + V AC S SAA+ GK++MWG+ + +
Sbjct: 239 SYGQLGTGYKTHHLSPVIVAPELGKAVEIAACHLSHISAAMFHDGKIFMWGHCRGHSIFS 298
Query: 178 P 178
P
Sbjct: 299 P 299
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCG-GFFTMVLTEEG 58
++Y G + G LGLG + A L P K+++L + ++ G G + ++ G
Sbjct: 20 DVYAMGCNSS-GCLGLG-----DTASALQ-PRKIESLCKKKIKGLAYGSGLHLLAFSDSG 72
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+L+ WG N+ +LG G+ P L+ L +IQ+ G +H LALT +G+VF+WG
Sbjct: 73 ELYTWGYNTYSQLGNGNTNHTLTPSLVSGVLAGKTVIQVGCGNHHCLALTSEGEVFAWGQ 132
Query: 118 GGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ G T Q VP V + V IACG TS A+ + G LY WG + +LG
Sbjct: 133 NNGGQCGSGTTTGQSVPRRVTSGIGGHKVVAIACGQLTSMALLDDGDLYGWGYNGNGELG 192
Query: 177 V 177
+
Sbjct: 193 I 193
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+++T + ++ G NS+ LG GD +P+ + +L +I +A G G H LA +D G
Sbjct: 13 IMVTVDDDVYAMGCNSSGCLGLGDTASALQPRKIESLCKKKIKGLAYGSGLHLLAFSDSG 72
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
++++WGY + QLG+ T + P ++ LA + V + CG A+T +G+++ WG
Sbjct: 73 ELYTWGYNTYSQLGNGNTNHTLTPSLVSGVLAGKTVIQVGCGNHHCLALTSEGEVFAWGQ 132
Query: 170 AKDSQLG 176
Q G
Sbjct: 133 NNGGQCG 139
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG E +G+LG G L P V+AL + V+CG + ++ +G+
Sbjct: 3093 KVFSWGEGE-DGKLGHG------NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGE 3145
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD KPKL+ L R++Q+A G +LALT+DG VFSWG
Sbjct: 3146 LYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3205
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LG ++ P IE L+ V I CG S A+T G+++ WG +LG
Sbjct: 3206 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG 3264
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG + +P ++ L V AV GG + LT +G++++WG +
Sbjct: 3049 GRLGLGVTHN------VPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED 3102
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R KP+L+ L +I +A G HS A++ G++++WG G +G+LGH
Sbjct: 3103 GKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3162
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P ++ ALA V +ACG + + A+TE G ++ WG+ +LG
Sbjct: 3163 TTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3212
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G + P +++ L + V + CG F++ LT G++
Sbjct: 3200 VFSWG-DGDFGKLGRGGSEGSD------TPHEIERLSGIGVVQIECGAQFSLALTRAGEV 3252
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP+ + L R+I +A G H LA+TD G+V++WG H
Sbjct: 3253 WTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDH 3312
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P ++ L FV +ACG S S A
Sbjct: 3313 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P V AL V V+CG T+ LTE+
Sbjct: 3145 ELYTWGLGE-YGRLGHGDNTTQLK------PKLVTALAGRRVVQVACGSRDAQTLALTED 3197
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L + ++QI G SLALT G+V++WG
Sbjct: 3198 GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGK 3257
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I L V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3258 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3316
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V AV+ GG + LT EG+++ WG + +LG G+R+ +PKL+ +L + + IA
Sbjct: 4136 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIAC 4195
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSA 156
G HS A+T G V +WG G +G+LGH +++Q P ++EAL IACG + +
Sbjct: 4196 GSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTL 4255
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
+T+ ++ WG+ +LG
Sbjct: 4256 CITDDDNVWSWGDGDYGKLG 4275
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLW 61
Y+WG E + RLG G + ++P+K+ AL V +V CG ++ +T G L
Sbjct: 638 YSWGTGE-DHRLGHG------DTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLL 690
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGG 119
WG + LG G+ P L+ L D ++ +A +G HSLALT +G VF+WG G
Sbjct: 691 TWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGD 750
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+G+LG+ P+++E+L V + G S A++ +G+LY WG A
Sbjct: 751 YGKLGNGNCNGSLQPILVESLPR--VQRVFAGSQFSVALSSEGQLYTWGKA 799
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT+ G +
Sbjct: 4263 VWSWG-DGDYGKLGRG------GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAV 4315
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L +II IA G H +A +D G+V++WG
Sbjct: 4316 YTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDE 4375
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++ AL + + + CG + + A++
Sbjct: 4376 GQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4414
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+ TWG+ GR G LG G ++ P V+AL ++CG T+ +T+
Sbjct: 4208 HVLTWGK----GRYGRLGHGDSEDQLR----PKLVEALLGYRAIDIACGSGDAQTLCITD 4259
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4260 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWG 4319
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LGH + + P + AL + + IA G A ++ G++Y WG+ + QLG
Sbjct: 4320 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 4379
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 32 SKVKALPVPVAAVS----------CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
+K +A P+P+ V+ C G + + ++WG ++ LG GD
Sbjct: 599 AKPEAEPLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV 658
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
P + L + + G +S A+T G + +WG G + +LGH + ++ +P ++ AL+
Sbjct: 659 PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS 718
Query: 142 DEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
D V +A G + S A+T +G ++ WG+ +LG
Sbjct: 719 DHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 755
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEG 58
L TWGR RLG G + S+P+ V AL V A+ G ++ LT EG
Sbjct: 689 LLTWGRGT-YARLGHG------NSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 741
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG +LG G+ G +P L+ +L R+ ++ G S+AL+ +G++++WG
Sbjct: 742 LVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKA 799
Query: 119 ---GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GH QL Q VP ++ +L + + +A + A++ G+++ WG DSQ
Sbjct: 800 TCLGH-QLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGR-NDSQQ 857
Query: 176 GVPGLPVVQP 185
P +P
Sbjct: 858 ICPASVSSEP 867
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG- 99
+ V+C ++L++EG+L+ W L + + +P + + I IA
Sbjct: 574 IKQVACCETQMLILSQEGKLYTW------RLAKPEA----EPLPMEEVAHDVFISIAGHC 623
Query: 100 -GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H LA+ + +SWG G +LGH T + VP I AL V + CG S SAA+
Sbjct: 624 EGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 683
Query: 159 TEKGKLYMWGNAKDSQLG 176
T G L WG ++LG
Sbjct: 684 TCGGNLLTWGRGTYARLG 701
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 63 WGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N +LG +G +V P + +R I IA G ++ DGKV++ G G +
Sbjct: 2991 WGLNDKEQLGGLKGSKVK--VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTN 3048
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T N +P + L V +A GG + A+T GK++ WG +D +LG
Sbjct: 3049 GRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 3106
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG D G+LG G N G L P V++LP V V G F++ L+ EGQL+
Sbjct: 743 VFAWG-DGDYGKLGNG-----NCNGSLQ-PILVESLPR-VQRVFAGSQFSVALSSEGQLY 794
Query: 62 NWGANS--NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
WG + ++L G P+L+ +L RI+ +A H LAL+ G+VF WG
Sbjct: 795 TWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRND 854
Query: 120 HGQLGHSFTQNQ---KVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
Q+ + ++ + P+++ +L + IAC + S T+
Sbjct: 855 SQQICPASVSSEPLLRTPILV-SLPTFPASGIACTSAQSLVWTQSS 899
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 60 LWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG N +LG G R+ P L +R +Q+A G A+T DGK+F+ GY
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIK--TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4108
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG + + +P ++ +L FV +A GG A+T +G++Y WG +D +L
Sbjct: 4109 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4168
Query: 176 G 176
G
Sbjct: 4169 G 4169
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+++ WG E EG+LGLG + IP +K L +A V CG + L+++GQ
Sbjct: 103 QVFAWGAGE-EGQLGLGTTET-----AVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQ 156
Query: 60 LWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L+ WG N++ +LG G P+ L +L + + +I GG HS AL+ G VF WG
Sbjct: 157 LFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKN 216
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG + Q++ VP I+ L + V HI+CG +AA+T+ G L+ +G+ QLG
Sbjct: 217 KAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLG 274
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+TWG++ G+LGLG G P++ P +K+L +P+A ++ GG + L+ G
Sbjct: 156 QLFTWGQNTS-GQLGLGKGE-PSKL----FPQPLKSLAGIPLAKITAGGDHSFALSLSGA 209
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D P + L +++ I+ G H+ ALT DG +F++G G
Sbjct: 210 VFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGS 269
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH T N+ +P + L V+ I CG T A G +Y +G QLG
Sbjct: 270 WGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGT 328
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 2 LYTWGRDEGEGRLGLG-PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+YT G + G+LG PG P G L + VSCG ++ + E+GQ+
Sbjct: 54 VYTCGSNSC-GQLGHNKPGITPEFVGALDTQK--------ITLVSCGQAHSLAVNEQGQV 104
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WGA +LG G + P+L+ L D RI Q+ G H +AL+ DG++F+WG
Sbjct: 105 FAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNT 164
Query: 120 HGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLG + K+ P +++LA + I GG S A++ G ++ WG K QLG+
Sbjct: 165 SGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLN 224
Query: 179 GL-PVVQPCPVE 189
+ PC ++
Sbjct: 225 DIQDRAVPCHIK 236
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+ WG+ + +G+LG+G R P + P + + CGG ++ L +G +
Sbjct: 1 MLCWGKAK-DGQLGIGVERNP-----MFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSV 54
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ G+NS +LG G P+ + L +I ++ G HSLA+ + G+VF+WG G
Sbjct: 55 YTCGSNSCGQLGHNK--PGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEE 112
Query: 121 GQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG T+ ++P +I+ L D + + CG A+++ G+L+ WG QLG+
Sbjct: 113 GQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGL 170
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 14/161 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WG+++ G+LGL N+ ++P +K L V +SCG T LT++G L
Sbjct: 210 VFGWGKNKA-GQLGL------NDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGL 262
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +G S +LG G P+ + L+ + QI G +H+LA G V+++G
Sbjct: 263 FTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNS 322
Query: 120 HGQLGHSFTQNQKVPMVIEA--LADEF---VTHIACGGSTS 155
HGQLG K P ++ L+ VT I CGG S
Sbjct: 323 HGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHS 363
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG E +G+LG G L P V+AL + V+CG + ++ +G+
Sbjct: 2748 KVFSWGEGE-DGKLGHG------NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGE 2800
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD KPKL+ L R++Q+A G +LALT+DG VFSWG
Sbjct: 2801 LYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 2860
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LG ++ P IE L+ V I CG S A+T G+++ WG +LG
Sbjct: 2861 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG 2919
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG + +P ++ L V AV GG + LT +G++++WG +
Sbjct: 2704 GRLGLGVTHN------VPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED 2757
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R KP+L+ L +I +A G HS A++ G++++WG G +G+LGH
Sbjct: 2758 GKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 2817
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P ++ ALA V +ACG + + A+TE G ++ WG+ +LG
Sbjct: 2818 TTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 2867
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G + P +++ L + V + CG F++ LT G++
Sbjct: 2855 VFSWG-DGDFGKLGRGGSEGSD------TPHEIERLSGIGVVQIECGAQFSLALTRAGEV 2907
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP+ + L R+I +A G H LA+TD G+V++WG H
Sbjct: 2908 WTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDH 2967
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P ++ L FV +ACG S S A
Sbjct: 2968 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3004
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P V AL V V+CG T+ LTE+
Sbjct: 2800 ELYTWGLGE-YGRLGHGDNTTQLK------PKLVTALAGRRVVQVACGSRDAQTLALTED 2852
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L + ++QI G SLALT G+V++WG
Sbjct: 2853 GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGK 2912
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I L V H+A G AVT+ G++Y WG+ Q G
Sbjct: 2913 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2971
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLW 61
Y+WG E + RLG G + ++P+K+ AL V +V CG ++ +T G L
Sbjct: 292 YSWGTGE-DHRLGHG------DTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLL 344
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGG 119
WG + LG G+ P L+ L D ++ +A +G HSLALT +G VF+WG G
Sbjct: 345 TWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGD 404
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+G+LG+ P+++E+L V + G S A++ +G+LY WG A
Sbjct: 405 YGKLGNGNCNGSLQPILVESLPR--VQRVFAGSQFSVALSSEGQLYTWGKA 453
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 32 SKVKALPVPVAAVS----------CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
+K +A P+P+ V+ C G + + ++WG ++ LG GD
Sbjct: 253 AKPEAEPLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV 312
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
P + L + + G +S A+T G + +WG G + +LGH + ++ +P ++ AL+
Sbjct: 313 PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS 372
Query: 142 DEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
D V +A G + S A+T +G ++ WG+ +LG
Sbjct: 373 DHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 409
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 17/184 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEG 58
L TWGR RLG G + S+P+ V AL V A+ G ++ LT EG
Sbjct: 343 LLTWGRGT-YARLGHG------NSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 395
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG +LG G+ G +P L+ +L R+ ++ G S+AL+ +G++++WG
Sbjct: 396 LVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKA 453
Query: 119 ---GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GH QL Q VP ++ +L + + +A + A++ G+++ WG DSQ
Sbjct: 454 TCLGH-QLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGR-NDSQQ 511
Query: 176 GVPG 179
P
Sbjct: 512 ICPA 515
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG- 99
+ V+C ++L++EG+L+ W L + + +P + + I IA
Sbjct: 228 IKQVACCETQMLILSQEGKLYTW------RLAKPEA----EPLPMEEVAHDVFISIAGHC 277
Query: 100 -GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H LA+ + +SWG G +LGH T + VP I AL V + CG S SAA+
Sbjct: 278 EGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 337
Query: 159 TEKGKLYMWGNAKDSQLG 176
T G L WG ++LG
Sbjct: 338 TCGGNLLTWGRGTYARLG 355
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 63 WGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N +LG +G +V P + +R I IA G ++ DGKV++ G G +
Sbjct: 2646 WGLNDKEQLGGLKGSKVK--VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTN 2703
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T N +P + L V +A GG + A+T GK++ WG +D +LG
Sbjct: 2704 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 2761
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG D G+LG G N G L P V++LP V V G F++ L+ EGQL+
Sbjct: 397 VFAWG-DGDYGKLGNG-----NCNGSLQ-PILVESLPR-VQRVFAGSQFSVALSSEGQLY 448
Query: 62 NWGANS--NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
WG + ++L G P+L+ +L RI+ +A H LAL+ G+VF WG
Sbjct: 449 TWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRND 508
Query: 120 HGQLGHSFTQNQ---KVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
Q+ + ++ + P+++ +L + IAC + S T+
Sbjct: 509 SQQICPASVSSEPLLRTPILV-SLPTFPASGIACTSAQSLVWTQSS 553
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 60 LWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG N +LG G R+ P L +R +Q+A G A+T DGK+F+ GY
Sbjct: 3704 IYGWGHNHRGQLGGLEGSRIK--TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 3761
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
G G+LG + + +P ++ +L FV +A
Sbjct: 3762 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVA 3793
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + +P +V AL V AV GG LT +G++++WG +
Sbjct: 1857 GRLGLGVS-----SGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDD 1911
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 1912 GKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 1971
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 1972 TTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 2021
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N +P ++ L V + CG F++ LT+ G +
Sbjct: 2009 VFSWG-DGDFGKLGRGGSEGCN------VPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2061
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 2062 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 2121
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P +++ L + +T +ACG S S A
Sbjct: 2122 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2158
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 2865 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 2924
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V +
Sbjct: 2925 RGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDV 2984
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +TE ++ WG+ +LG
Sbjct: 2985 ACGSGDAQTLCLTEDDTVWSWGDGDYGKLG 3014
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTM-VLTEEGQ 59
+++ WG ++ + GL + + +PS + L A GG ++ +T EG+
Sbjct: 1795 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNAVQVAGGSKSLFAVTVEGK 1847
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 1848 VYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWG 1907
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + IACG S SAA+T G+LY WG + +LG
Sbjct: 1908 EGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 1967
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 1954 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLVGHRVVQVACGSRDAQTLALTDE 2006
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 2007 GLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2066
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 2067 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2125
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P KV AL + V CG F++ LT+ G +
Sbjct: 3002 VWSWG-DGDYGKLGRGG------SDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAV 3054
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 3055 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 3114
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 3115 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3151
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEEG 58
LYTWG+ GR G G +++ P V+AL V V+CG T+ LTE+
Sbjct: 2948 LYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDD 3000
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W+WG +LGRG G P + L + +++ G S+ALT G V++WG G
Sbjct: 3001 TVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKG 3060
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 3061 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 3118
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R Q+ G A+T DGK+++ GY
Sbjct: 2788 GTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVTADGKLYATGY 2847
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 2848 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 2907
Query: 176 G 176
G
Sbjct: 2908 G 2908
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ +A G
Sbjct: 1778 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGS 1836
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 1837 KSLFAVTVEGKVYACGEATNGRLGL 1861
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 2463 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2515
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 2516 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 2575
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P +++ L + +T +ACG S S A
Sbjct: 2576 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2612
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 2311 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2365
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 2366 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2425
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 2426 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 2475
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 3318 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 3377
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 3378 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 3437
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 3438 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3467
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2249 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2301
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 2302 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 2361
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 2362 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 2421
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 2408 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 2460
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 2461 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2520
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 2521 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2579
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 3400 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 3452
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 3453 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 3512
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 3513 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 3571
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 3455 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3507
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 3508 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 3567
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 3568 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3604
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3241 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3300
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3301 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 3360
Query: 176 G 176
G
Sbjct: 3361 G 3361
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2232 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2290
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 2291 KSLFAVTVEGKVYACGEATNGRLGL 2315
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 105/184 (57%), Gaps = 11/184 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LYT G ++ G+LG PN+ P + AL V VSCG ++ LT GQ
Sbjct: 56 KLYTCGNND-HGQLGHDTNNLPNKR-----PQFISALENYIVTQVSCGLSHSLALTNWGQ 109
Query: 60 LWNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L++WG+N+ +LG D V P+++ ++ ++QI+ G H LALT+ G++F+WG
Sbjct: 110 LFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGAN 169
Query: 119 GHGQLGHSFTQNQKVP--MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG T +KVP ++++LA + IACGG+ S AV++ G ++ WG QLG
Sbjct: 170 EYGQLGLG-TTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 228
Query: 177 VPGL 180
+ L
Sbjct: 229 LNDL 232
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 97/178 (54%), Gaps = 6/178 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LY WG G LGLG G E ++ + V +CGG T++LT++G+L+
Sbjct: 3 LYCWG-STVHGELGLG---GIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLY 58
Query: 62 NWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N + +LG + + +P+ + L + + Q++ G HSLALT+ G++FSWG
Sbjct: 59 TCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNAT 118
Query: 121 GQLGHSFTQ-NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH + P +I+++A + V I+CG S A+T G+L+ WG + QLG+
Sbjct: 119 GQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGL 176
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 12/169 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSK--VKALP-VPVAAVSCGGFFTMVLTEE 57
EL+ WG +E G+LGLG G +P+ VK+L +P+A ++CGG + +++
Sbjct: 162 ELFAWGANE-YGQLGLG-------TTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKS 213
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N+ +LG D P L L + + I+ G S+ LT +G VF+ G
Sbjct: 214 GAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGL 273
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEKGKLY 165
G GQLGH N+ +P ++ L +T IACG T A V +GK+Y
Sbjct: 274 GTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 60 LWNWGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
L+ WG+ + ELG G + P+ + + Q A GG H+L LT DGK+++ G
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 118 GGHGQLGHSFTQN--QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
HGQLGH T N K P I AL + VT ++CG S S A+T G+L+ WG+ QL
Sbjct: 63 NDHGQLGHD-TNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQL 121
Query: 176 GVPGLPVVQPCP 187
G V P P
Sbjct: 122 GHDLDMVSYPAP 133
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG E +G+LG G L P V+AL + ++CG + ++ +G+
Sbjct: 3019 KVFSWGEGE-DGKLGHG------NRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGE 3071
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD KPKL+ L R+IQ+A G +LALT+DG VFSWG
Sbjct: 3072 LYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGD 3131
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LG ++ P IE L+ V I CG S A+T G+++ WG +LG
Sbjct: 3132 GDFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG 3190
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG RG +E G + P +++ L + V + CG F++ LT G++
Sbjct: 3126 VFSWG-DGDFGKLG----RGGSE--GSATPHEIERLSGIGVVQIECGAQFSLALTRAGEV 3178
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP+ + L R+I +A G H LA+TD G+V++WG H
Sbjct: 3179 WTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDH 3238
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P ++ L FV +ACG S S A
Sbjct: 3239 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3275
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + A L P V AL V V+CG T+ LTE+
Sbjct: 3071 ELYTWGLGE-YGRLGHG-----DNATQLK-PKLVTALCGSRVIQVACGSRDAQTLALTED 3123
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L + ++QI G SLALT G+V++WG
Sbjct: 3124 GAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGK 3183
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I L V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3184 GDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3242
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 11/170 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG + +P ++ L V AV GG + LT +G++++WG +
Sbjct: 2975 GRLGLGVTHN------VPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED 3028
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R KP+L+ L +I IA G HS A++ G++++WG G +G+LGH
Sbjct: 3029 GKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3088
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P ++ AL V +ACG + + A+TE G ++ WG+ +LG
Sbjct: 3089 ATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3138
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 87/153 (56%), Gaps = 5/153 (3%)
Query: 29 SIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
SIP+ + +L V AV+ GG + LT +G+++ WG + +LG G+R+ +PKLL
Sbjct: 4144 SIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLL 4203
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFV 145
+L + + IA G HS A+T G V +WG G +G+LGH +++Q P ++EAL
Sbjct: 4204 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRA 4263
Query: 146 THIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
IACG + + +T+ ++ WG+ +LG
Sbjct: 4264 IDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4296
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 91/170 (53%), Gaps = 11/170 (6%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWN 62
Y+WG + RLG G + +P+K+++L V +V CG ++ +T G L+
Sbjct: 663 YSWGTGDNR-RLGHG------DCHSRELPTKIESLVRRVKSVYCGCSYSAAITLRGNLYT 715
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGGH 120
WG + LG G P ++ L D +++ +A +G H+L LT++G V++WG G +
Sbjct: 716 WGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDY 775
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
G+LG++ + P++IE L V + G S A+T +G+LY WG A
Sbjct: 776 GKLGNASCNSSLQPLLIECLPR--VQRVFAGSQFSLALTGEGQLYSWGKA 823
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDD 109
V++++G+++ G +N LG G P LP L V+ + + +GG H+LALT D
Sbjct: 2958 FVVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLD 3017
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
GKVFSWG G G+LGH P ++EAL + + IACG S SAA++ +G+LY WG
Sbjct: 3018 GKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGL 3077
Query: 170 AKDSQLG 176
+ +LG
Sbjct: 3078 GEYGRLG 3084
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT+ G +
Sbjct: 4284 VWSWG-DGDYGKLGRGG------SDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAV 4336
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L +II IA G H +A +D G+V++WG
Sbjct: 4337 YTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDE 4396
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++ AL + + + CG + + A++
Sbjct: 4397 GQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4435
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+ TWG+ GR G LG G ++ P V+AL ++CG T+ +T+
Sbjct: 4229 HVLTWGK----GRYGRLGHGDSEDQLR----PKLVEALLGYRAIDIACGSGDAQTLCITD 4280
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + +I++ G S+ALT G V++WG
Sbjct: 4281 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWG 4340
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LGH + + P + AL + + IA G A ++ G++Y WG+ + QLG
Sbjct: 4341 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG 4400
Query: 177 VPGLPVVQ 184
+ +Q
Sbjct: 4401 DGTVTAIQ 4408
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
A C G + + ++WG N LG GD P + +LV R+ + G +
Sbjct: 645 ASHCEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVR-RVKSVYCGCSY 703
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S A+T G +++WG G +G+LGH + +Q +P ++ AL D V +A G + + +T
Sbjct: 704 SAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTN 763
Query: 161 KGKLYMWGNAKDSQLG 176
+G +Y WG+ +LG
Sbjct: 764 EGLVYAWGDGDYGKLG 779
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 23/144 (15%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV------RII 94
V V+C ++L++EG+L+NW + KP P +D I
Sbjct: 597 VKQVACSKDIVLLLSKEGKLYNWHIS--------------KPDTEPQPLDFGDIGSETFI 642
Query: 95 QIANG--GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
IA+ G H LA+ ++ +SWG G + +LGH ++++P IE+L V + CG
Sbjct: 643 SIASHCEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVRR-VKSVYCGC 701
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
S SAA+T +G LY WG +LG
Sbjct: 702 SYSAAITLRGNLYTWGRGNYGRLG 725
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 87/180 (48%), Gaps = 16/180 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEG 58
LYTWGR GRLG G + +P+ V AL V A+ G T+ LT EG
Sbjct: 713 LYTWGRG-NYGRLGHGI------SDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEG 765
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG +LG +P L+ L R+ ++ G SLALT +G+++SWG
Sbjct: 766 LVYAWGDGDYGKLGNASCNSSLQPLLIECLP--RVQRVFAGSQFSLALTGEGQLYSWGKA 823
Query: 119 ---GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GH QL Q VP +I +L + + +A G + A++ G+++ WG + Q+
Sbjct: 824 SCLGH-QLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQI 882
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 63 WGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N +LG +G +V P + +R I IA G ++ DGKVF+ G G +
Sbjct: 2917 WGLNDKEQLGGLKGSKVK--VPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEGTN 2974
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T N +P + L V +A GG + A+T GK++ WG +D +LG
Sbjct: 2975 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 3032
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 60 LWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG N +LG G R+ P L +R +Q+A G A+T DGK+F+ GY
Sbjct: 4072 IYGWGHNHRGQLGGLEGSRIK--TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4129
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG + + +P ++ +L FV +A GG A+T G++Y WG +D +L
Sbjct: 4130 GSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKL 4189
Query: 176 G 176
G
Sbjct: 4190 G 4190
>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Danio rerio]
gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
Length = 531
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 81/128 (63%), Gaps = 2/128 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDG 110
+++TE+G+L+ WG N +LG G G P L+ NL R+ +++ G +HSLALT +G
Sbjct: 88 LLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEG 147
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WGY GQ+G T NQ P V L ++ + +IACG ++S AVT+ G++Y WG
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGY 207
Query: 170 AKDSQLGV 177
+ QLG+
Sbjct: 208 NGNGQLGL 215
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 91/178 (51%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELY WG + G +LG G G I V VSCG ++ LT EG++
Sbjct: 95 ELYAWGHN-GYSQLG----NGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEV 149
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-IIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N+ ++G G P+ + N + + I+ IA G S+A+TD+G+V+ WGY G
Sbjct: 150 FAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNG 209
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + AL V IA G + S A+T++G LY WG QLG
Sbjct: 210 NGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGT 267
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
+ ++CG +M +T+ G+++ WG N N +LG G+ P L L ++QIA+G
Sbjct: 183 IVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGY 242
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVT 159
HSLALTD+G +++WG +GQLG NQ P+ + + V AC + TSAA T
Sbjct: 243 AHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQVMTEKERIVEIAACHSTHTSAAKT 302
Query: 160 EKGKLYMWGNAKDSQLGVPGL 180
+ G++YMWG + + +P L
Sbjct: 303 QSGQVYMWGQCRGQAIVLPHL 323
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T + +++ G N + LG GD PK L L ++I ++ G G H L +T+DG
Sbjct: 35 IYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
++++WG+ G+ QLG+ T P+++ L + VT ++CG S A+T +G+++ WG
Sbjct: 95 ELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG +P K++A V V ++ G T +TE+G
Sbjct: 138 EVQSWGRNQ-NGQLGLGTTEDS------LLPQKIQAFESVCVKMIAAGAEHTAAVTEDGD 190
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + ++ +++ +A G H++ ++D G ++++G+
Sbjct: 191 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSK 250
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH ++ VP +EAL D ++ I+ G + A+T +GKLY WG K Q+GV
Sbjct: 251 YGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGV 308
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTE-EGQ 59
L +WGR E +G+LG G +A +P+ + P + +V CG T +E E Q
Sbjct: 34 LCSWGRGE-DGQLGHG------DAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQ 86
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG LG G+ + P+ + L ++I QIA G H LA+T G+V SWG
Sbjct: 87 VYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQ 146
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG T++ +P I+A V IA G +AAVTE G LY WG + LG+
Sbjct: 147 NGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 204
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GRLG G + + P VKAL + + ++CG + +T G+
Sbjct: 86 QVYSWGWGD-FGRLGHG------NSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGE 138
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G P+ + V + IA G H+ A+T+DG ++ WG+G
Sbjct: 139 VQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGR 198
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ +P + ++ E + +ACG + V++ G LY +G +K QLG
Sbjct: 199 YGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLG 255
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + +P KV ++ + V+CG T+ +++ G
Sbjct: 190 DLYGWGWGR-YGNLGLG------DRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGN 242
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P + L D I QI+ G H++ALT +GK++ WG+
Sbjct: 243 LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNK 302
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G + P + D+ ++ +ACG + A++EK ++ WG QLG
Sbjct: 303 FGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLG 359
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P V VS G ++ L L +WG + +LG GD P +L I +
Sbjct: 12 PQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVI 71
Query: 98 NGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
G H+ A ++D +V+SWG+G G+LGH + + P ++AL + IACG S
Sbjct: 72 CGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCL 131
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
AVT G++ WG ++ QLG+
Sbjct: 132 AVTMAGEVQSWGRNQNGQLGL 152
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Query: 30 IPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P KV+AL ++ +S G TM LT EG+L+ WG N ++G G+ P +
Sbjct: 264 VPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFP 323
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
D +I Q+A G H+LAL++ VFSWG G GQLG+ ++ P++I+AL+ +
Sbjct: 324 EDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSSDGSACK 383
Query: 149 ACGGSTSAAVTEK 161
ST+A K
Sbjct: 384 KLESSTAAPFAAK 396
>gi|27695022|gb|AAH43960.1| LOC398469 protein, partial [Xenopus laevis]
Length = 589
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 80/128 (62%), Gaps = 2/128 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDG 110
++ E+G++++WG N +LG G+ + G P ++ L+ ++IQ+A G +HS+ALT DG
Sbjct: 147 LLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDG 206
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VFSWGY GQ+G T NQ VP V +L + V I+ G ++S A+T+ G +Y WG
Sbjct: 207 EVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNGHVYGWGY 266
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 267 NGTGQLGL 274
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 7/190 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG + G +LG G G + ++ L V V+CG +M LT +G++
Sbjct: 154 EVYSWGHN-GYSQLG----NGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDGEV 208
Query: 61 WNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG N+ ++G G P K+ +L ++ I+ G S+ALTD+G V+ WGY G
Sbjct: 209 FSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNGHVYGWGYNG 268
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG T NQ +P + + + G + + A++++G LY WG QLG+ G
Sbjct: 269 TGQLGLGNTGNQLMPCRLVFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGI-G 327
Query: 180 LPVVQPCPVE 189
Q PV+
Sbjct: 328 NKSNQTVPVK 337
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 11/183 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA--LPVPVAAVSCGGFFTMVLTEEG 58
E+++WG + G++G G S+P KV + V ++S G +M LT+ G
Sbjct: 207 EVFSWGYNNC-GQVGSGT------TANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNG 259
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG N +LG G+ P L + IIQ+ G H+LAL+D G +++WG
Sbjct: 260 HVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPICIIQVVLGYAHTLALSDQGVLYAWGAN 319
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST-SAAVTEKGKLYMWGNAKDSQLGV 177
HGQLG NQ VP+ + + V AC + SAA ++ ++YMWG + L
Sbjct: 320 SHGQLGIGNKSNQTVPVKV-GTNERMVEVTACHSTNISAAKSQSEQVYMWGLCRGQCLLS 378
Query: 178 PGL 180
P L
Sbjct: 379 PHL 381
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 46 CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSL 104
C + T+ +++ +G N + LG GD P+ L L +I+ ++ G G H L
Sbjct: 88 CSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHIL 147
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGK 163
+DG+V+SWG+ G+ QLG+ T P+ V L + V +ACG S A+T G+
Sbjct: 148 LCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDGE 207
Query: 164 LYMWGNAKDSQLG 176
++ WG Q+G
Sbjct: 208 VFSWGYNNCGQVG 220
>gi|351542221|ref|NP_001082438.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 80/128 (62%), Gaps = 2/128 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDG 110
++ E+G++++WG N +LG G+ + G P ++ L+ ++IQ+A G +HS+ALT DG
Sbjct: 158 LLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDG 217
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VFSWGY GQ+G T NQ VP V +L + V I+ G ++S A+T+ G +Y WG
Sbjct: 218 EVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNGHVYGWGY 277
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 278 NGTGQLGL 285
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 7/190 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG + G +LG G G + ++ L V V+CG +M LT +G++
Sbjct: 165 EVYSWGHN-GYSQLG----NGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDGEV 219
Query: 61 WNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG N+ ++G G P K+ +L ++ I+ G S+ALTD+G V+ WGY G
Sbjct: 220 FSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNGHVYGWGYNG 279
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG T NQ +P + + + G + + A++++G LY WG QLG+ G
Sbjct: 280 TGQLGLGNTGNQLMPCRLVFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGI-G 338
Query: 180 LPVVQPCPVE 189
Q PV+
Sbjct: 339 NKSNQTVPVK 348
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA--LPVPVAAVSCGGFFTMVLTEEG 58
E+++WG + G++G G S+P KV + V ++S G +M LT+ G
Sbjct: 218 EVFSWGYNNC-GQVGSGT------TANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNG 270
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG N +LG G+ P L + IIQ+ G H+LAL+D G +++WG
Sbjct: 271 HVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPICIIQVVLGYAHTLALSDQGVLYAWGAN 330
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST-SAAVTEKGKLYMWGNAKDSQLGV 177
HGQLG NQ VP+ + + V AC + SAA ++ G++YMWG + L
Sbjct: 331 SHGQLGIGNKSNQTVPVKV-GTNERMVEVTACHSTNISAAKSQSGQVYMWGLCRGQCLLS 389
Query: 178 PGL 180
P L
Sbjct: 390 PHL 392
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 46 CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSL 104
C + T+ +++ +G N + LG GD P+ L L +I+ ++ G G H L
Sbjct: 99 CSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHIL 158
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGK 163
+DG+V+SWG+ G+ QLG+ T P+ V L + V +ACG S A+T G+
Sbjct: 159 LCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDGE 218
Query: 164 LYMWGNAKDSQLG 176
++ WG Q+G
Sbjct: 219 VFSWGYNNCGQVG 231
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 105/190 (55%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG +P K++A V V V+ G T +TE+G+
Sbjct: 141 EVQSWGRNQ-NGQLGLGTTEDS------LVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGE 193
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + + V+++++A G H+++++ G ++++G+
Sbjct: 194 LYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSK 253
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH ++ P +EAL + ++ I+ G + A+T GKLY WG K Q+GV G
Sbjct: 254 YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGV-G 312
Query: 180 LPVVQPCPVE 189
V PV+
Sbjct: 313 DNVDHCSPVQ 322
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 94/176 (53%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEE-GQLW 61
+WGR E +G+LG G +A P+ + AL V +V+CG T +E Q++
Sbjct: 39 SWGRGE-DGQLGHG------DAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVY 91
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P+ + L +RI QIA G H LA+T DG+V SWG +G
Sbjct: 92 SWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNG 151
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+A V +A G +AAVTE G+LY WG + LG+
Sbjct: 152 QLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGL 207
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG G LGLG + +P KV + V + V+CG T+ ++ G
Sbjct: 193 ELYGWGWGR-YGNLGLG------DRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGG 245
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P L L + I +I+ G H++ALT DGK++ WG+
Sbjct: 246 LYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNK 305
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G + P+ ++ ++ V HI+CG + AVTE+ ++ WG + QLG
Sbjct: 306 FGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLG 362
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GRLG G + L P +KAL + + ++CG + +T +G+
Sbjct: 89 QVYSWGWGD-FGRLGHG------NSSDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGE 141
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G P+ + V + +A G H+ A+T+DG+++ WG+G
Sbjct: 142 VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGR 201
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + + + +ACG + +V+ G LY +G +K QLG
Sbjct: 202 YGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLG 258
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P K++AL ++ +S G TM LT +G+L+ WG N ++G GD V P +
Sbjct: 268 PHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPH 327
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
+ +++ I+ G H+LA+T+ VFSWG G +GQLGH + ++ +P +IE L+
Sbjct: 328 EQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLS 379
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 32 SKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV 91
S+V A V +S G ++ L + +WG + +LG GD P L L
Sbjct: 9 SEVSAPVRRVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGH 68
Query: 92 RIIQIANGGYHSLALTDD-GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
++ + G H+ A ++ +V+SWG+G G+LGH + + P I+AL + IAC
Sbjct: 69 EVVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIAC 128
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G S AVT G++ WG ++ QLG+
Sbjct: 129 GDSHCLAVTMDGEVQSWGRNQNGQLGL 155
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIACLSYGSGPHIV 88
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++ ++A G YHSL LT DG+
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGE 148
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ +IACG S AV G++Y+WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYN 208
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 209 GNGQLGL-GSSGNQPTPCR 226
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALPVPVAA-VSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V L VA ++CG +M + G
Sbjct: 148 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 201 EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 261 SYGQLGTGNKSNQSYPAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLSGKKIACLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++ ++A G YHSL LT DG+
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P + L ++ +IACG S AV G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYN 232
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 233 GNGQLGL-GSSGNQPTPCR 250
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALPVPVAA-VSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V L VA ++CG +M + G
Sbjct: 172 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 225 EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 285 SYGQLGTGNKSNQSYPAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVL 344
Query: 178 PGL 180
P L
Sbjct: 345 PHL 347
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT ACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + AV+CG T+ L ++GQ++ WG +S+ +LG +G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG Q Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ +A G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + +ACG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + Q A G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|259490348|ref|NP_001159191.1| uncharacterized protein LOC100304276 [Zea mays]
gi|223942555|gb|ACN25361.1| unknown [Zea mays]
gi|414871691|tpg|DAA50248.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 480
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 94/189 (49%), Gaps = 26/189 (13%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
L+ WG+++G P G P+ V + VSCG M L+E+G L
Sbjct: 141 RLWVWGQNQGSDY--------PRLFWGAFTPNTV------IKQVSCGAVHVMALSEDGLL 186
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLV---------DVRIIQIANGGYHSLALTDDGK 111
WG N +LGRG G + + N V+I++++ G YH+ A++++G+
Sbjct: 187 QAWGYNEYGQLGRGRTSQGLQGARVLNAYARFLDDAPEQVKIVRVSCGEYHTAAISENGE 246
Query: 112 VFSWGYGGHGQLGHSFTQ---NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
V++WG G GQLGH Q N+ +P + AL V ++CGG S AVTE G LY WG
Sbjct: 247 VYTWGLGSMGQLGHCSLQSGDNELIPRRVVALDGIVVGDVSCGGVHSCAVTEGGALYAWG 306
Query: 169 NAKDSQLGV 177
QLGV
Sbjct: 307 GGHVGQLGV 315
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 60 LWNWGANSNYELGR-GDRVGGWKPKLLP-------NLVDVRIIQIANGGYHSLALTDDGK 111
++ WG N + + R G PK LP N +R IA G H+ A+ DG
Sbjct: 21 IYIWGYNHSGQTARKGKECHLRIPKSLPPKLFKLGNGKSLRWTDIACGREHTAAVASDGS 80
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE---------KG 162
+F+WG GQLG + K P +++L EFV ++CG +AAV E K
Sbjct: 81 LFTWGANEFGQLGDGTEDSAKEPKKVKSLETEFVKSVSCGAHCTAAVAEPRENDGTVSKS 140
Query: 163 KLYMWGNAKDS 173
+L++WG + S
Sbjct: 141 RLWVWGQNQGS 151
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
E+YTWG G+LG G NE IP +V AL + V VSCGG + +TE G
Sbjct: 246 EVYTWGLGS-MGQLGHCSLQSGDNEL----IPRRVVALDGIVVGDVSCGGVHSCAVTEGG 300
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKL---------LPNLVDVRIIQIANGGY-HSLALTD 108
L+ WG +LG G + G + L +P LV +++A G+ H+L
Sbjct: 301 ALYAWGGGHVGQLGVGPQGGFFSCSLNGSDMLLRNIPVLVIPSGVRLATCGHSHTLVSMK 360
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
DG+++ WGY +GQ + + P ++ E V +A GG SA +T+ L
Sbjct: 361 DGRIYGWGYNSYGQATNEKSTYAWFPSPVDWCVGE-VRRLAAGGGHSAVLTDACSL 415
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGG---WKPKLLPNLVDVRIIQ 95
V + VSCG + T ++E G+++ WG S +LG G P+ + L + +
Sbjct: 226 VKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDNELIPRRVVALDGIVVGD 285
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLG-------HSFTQN------QKVPMVIEALAD 142
++ GG HS A+T+ G +++WG G GQLG S + N + +P+++
Sbjct: 286 VSCGGVHSCAVTEGGALYAWGGGHVGQLGVGPQGGFFSCSLNGSDMLLRNIPVLVIPSGV 345
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWG 168
T CG S + + G++Y WG
Sbjct: 346 RLAT---CGHSHTLVSMKDGRIYGWG 368
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 73/195 (37%), Gaps = 62/195 (31%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY-- 101
++CG T + +G L+ WGAN +LG G +PK + +L + ++ G +
Sbjct: 65 IACGREHTAAVASDGSLFTWGANEFGQLGDGTEDSAKEPKKVKSLETEFVKSVSCGAHCT 124
Query: 102 ---------------------------------------------------HSLALTDDG 110
H +AL++DG
Sbjct: 125 AAVAEPRENDGTVSKSRLWVWGQNQGSDYPRLFWGAFTPNTVIKQVSCGAVHVMALSEDG 184
Query: 111 KVFSWGYGGHGQLGHSFT----QNQKVPMVIEALADEF-----VTHIACGGSTSAAVTEK 161
+ +WGY +GQLG T Q +V D+ + ++CG +AA++E
Sbjct: 185 LLQAWGYNEYGQLGRGRTSQGLQGARVLNAYARFLDDAPEQVKIVRVSCGEYHTAAISEN 244
Query: 162 GKLYMWGNAKDSQLG 176
G++Y WG QLG
Sbjct: 245 GEVYTWGLGSMGQLG 259
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 88/157 (56%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG RG +E G S+P ++ L V V + CG F++ LT+ GQ+
Sbjct: 3129 VYSWG-DGDFGKLG----RGGSE--GCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQV 3181
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G KP+L+ L ++ +A G H L++ D+G+V++WG H
Sbjct: 3182 WTWGKGDYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDH 3241
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+S T + P +++ L ++ +ACG S S A
Sbjct: 3242 GQQGNSTTTVNRKPALVQGLEGCKISRVACGSSHSIA 3278
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG AG + P ++ +L + AV GG M LT +G++++WG +
Sbjct: 2977 GRLGLGIS-----AGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3031
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L R+ IA GG HS A+ +G +++WG G +G+LGH
Sbjct: 3032 GKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGDN 3091
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++AL + V +A G + + A+T+ G +Y WG+ +LG
Sbjct: 3092 TTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLG 3141
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 76/128 (59%), Gaps = 3/128 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIA--NGGYHSLALTD 108
+T++G+L+ G +N LG G G +P+ L +L I ++A +GG H++ALT
Sbjct: 2960 FCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTV 3019
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
DGKVFSWG G G+LGH N P +IEAL + V IACGGS SAA+ G LY WG
Sbjct: 3020 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWG 3079
Query: 169 NAKDSQLG 176
+ +LG
Sbjct: 3080 LGEYGRLG 3087
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 91/181 (50%), Gaps = 14/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGG--FFTMVLT 55
EL+TWGR GRLGLG P GL L V V V+CG T+ L
Sbjct: 550 ELFTWGRGSF-GRLGLGSTEDILTPALVSGL--------LGVTVVDVACGSGDAQTIALA 600
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
+ G +++WG +LGRG G PKL+ L + + ++ G +S A+ +G VF+W
Sbjct: 601 DTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTW 660
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G +LGH ++ + P +E LA + VT ++ G A TE+G+L WG QL
Sbjct: 661 GNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQL 720
Query: 176 G 176
G
Sbjct: 721 G 721
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + A++ GG + L+ EG++++WG + +LG G+R +P+ + +L
Sbjct: 4013 TLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIESL 4072
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
++ IA GG HS +T G+++SWG G +G+LGH +++Q P +++AL VT +
Sbjct: 4073 RGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTDV 4132
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4133 ACGSGDAQTLCITDDDSVWSWGDGDYGKLG 4162
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELY+WG+ GRLG G + P V AL V V+CG T+ +T++
Sbjct: 4095 ELYSWGKGR-YGRLGHGDSEDQTK------PKLVDALKGYRVTDVACGSGDAQTLCITDD 4147
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + L + +I++ G S+ALT G V++WG
Sbjct: 4148 DSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGK 4207
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P L + + IACG A T+ G++Y WG+ + QLG
Sbjct: 4208 GDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLG 4266
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
+LYTWG E GRLG G P VKAL V A+ T+ LT+
Sbjct: 3074 DLYTWGLGE-YGRLGHGDNTTQLR------PKLVKALEGQRVIQVALGSRDAQTLALTDS 3126
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L V + QI G SLALT G+V++WG
Sbjct: 3127 GTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGK 3186
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + VTH+A G +V + G++Y WG+ Q G
Sbjct: 3187 GDYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQG 3245
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ AL + V V CG F++ LT+ G +
Sbjct: 4150 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAV 4202
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ L +I+ IA G H +A TD G+V++WG
Sbjct: 4203 YTWGKGDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDE 4262
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + + +ACG + S A
Sbjct: 4263 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHSLA 4299
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V V+CG + +T G+L+ WG S LG G P L+ L+ V ++ +A +
Sbjct: 532 VVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGS 591
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G ++AL D G V+SWG G +G+LG ++ K P +++ L VT + CG SAAV
Sbjct: 592 GDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAV 651
Query: 159 TEKGKLYMWGNAKDSQLG 176
+ G ++ WGN + +LG
Sbjct: 652 CKNGAVFTWGNGEGYKLG 669
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
A G + LT EG +++WG +LG GD V P L+ L ++ +A G +H
Sbjct: 482 AAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHH 541
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S A+T G++F+WG G G+LG T++ P ++ L V +ACG + + A+ +
Sbjct: 542 SAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALAD 601
Query: 161 KGKLYMWGNAKDSQLG 176
G +Y WG+ + +LG
Sbjct: 602 TGSVYSWGDGEYGKLG 617
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
Query: 2 LYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+Y+WG +GE G+LG RG +E G P V L + V V CG ++ + + G
Sbjct: 605 VYSWG--DGEYGKLG----RGGSE--GCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGA 656
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG Y+LG G P+ + L + ++ G +H LA T++G++ SWG
Sbjct: 657 VFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRND 716
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P +L + + I C + + A
Sbjct: 717 KGQLGEGHTGLKAEPAFAASLLGKCIIGITCSSAQTFA 754
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 71/173 (41%), Gaps = 54/173 (31%)
Query: 58 GQLWNWGANSNYELG-----------RGDRVGGWKPKLL--------------------- 85
GQ+W WG N +LG + + +P L
Sbjct: 3936 GQIWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQLIGGEQTLFSITGDGKVCATGY 3995
Query: 86 ----------------PNLVD------VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL 123
P L++ +R + I +GG H LAL+ +G+V+SWG G G+L
Sbjct: 3996 GAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKL 4055
Query: 124 GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GH P IE+L + V IA GG+ SA +T G+LY WG + +LG
Sbjct: 4056 GHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLG 4108
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+VF WG QLG K P + E L+ I G + VT+ GKL+ G A
Sbjct: 2915 QVFVWGLNDKDQLGGPKGSKIKTPGINETLSTLKCVQIVGGSKSLFCVTQDGKLFACGEA 2974
Query: 171 KDSQLGV 177
+ +LG+
Sbjct: 2975 TNGRLGL 2981
>gi|307214730|gb|EFN89650.1| RCC1 and BTB domain-containing protein 1 [Harpegnathos saltator]
Length = 225
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 95/163 (58%), Gaps = 5/163 (3%)
Query: 31 PSKVKALPVP-VAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP-N 87
P K++AL + + G G + LT++G++++WG N ELG G G P ++ N
Sbjct: 43 PKKIEALCDKGIKTFAYGSGPHVLALTDKGEVFSWGHNGYCELGNGSTNQGLIPTMVNIN 102
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVT 146
L I+ IA G +HSLALTDDG+V++WG GQ+G + NQ P ++ + LA + V
Sbjct: 103 LNGKHIVDIACGNHHSLALTDDGEVYAWGQNNCGQVGSGISTNQGAPRLVNSNLAGKKVI 162
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
I CG ++S AVTE G++Y WG QLG+ G V Q PV+
Sbjct: 163 CITCGQASSMAVTETGEVYGWGYNGVGQLGI-GNYVNQVNPVK 204
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+++T++ ++ G+N++ LG GD PK + L D I A G G H LALTD G
Sbjct: 13 LIVTKDKTVYALGSNTSGCLGTGDMHSTLYPKKIEALCDKGIKTFAYGSGPHVLALTDKG 72
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VFSWG+ G+ +LG+ T +P MV L + + IACG S A+T+ G++Y WG
Sbjct: 73 EVFSWGHNGYCELGNGSTNQGLIPTMVNINLNGKHIVDIACGNHHSLALTDDGEVYAWGQ 132
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G+ Q P
Sbjct: 133 NNCGQVG-SGISTNQGAP 149
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG + G LG G G + + + ++CG ++ LT++G++
Sbjct: 73 EVFSWGHN-GYCELG----NGSTNQGLIPTMVNINLNGKHIVDIACGNHHSLALTDDGEV 127
Query: 61 WNWGANSNYELGRGDRVGGWKPKLL-PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N+ ++G G P+L+ NL ++I I G S+A+T+ G+V+ WGY G
Sbjct: 128 YAWGQNNCGQVGSGISTNQGAPRLVNSNLAGKKVICITCGQASSMAVTETGEVYGWGYNG 187
Query: 120 HGQLGHSFTQNQKVPMVIEAL 140
GQLG NQ P+ + L
Sbjct: 188 VGQLGIGNYVNQVNPVKVPGL 208
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 1 ELYTWGRDE-GEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+Y WG++ G+ +G G N+ + S + V ++CG +M +TE G+
Sbjct: 126 EVYAWGQNNCGQ----VGSGISTNQGAPRLVNSNLAGKKV--ICITCGQASSMAVTETGE 179
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ WG N +LG G+ V P +P L+ VRI
Sbjct: 180 VYGWGYNGVGQLGIGNYVNQVNPVKVPGLMGVRI 213
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 105/190 (55%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG +P K++A V V V+ G T +TE+G+
Sbjct: 129 EVQSWGRNQ-NGQLGLGTTEDS------LVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGE 181
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + + V+++++A G H+++++ G ++++G+
Sbjct: 182 LYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSK 241
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH ++ P +EAL + ++ I+ G + A+T GKLY WG K Q+GV G
Sbjct: 242 YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGV-G 300
Query: 180 LPVVQPCPVE 189
V PV+
Sbjct: 301 DNVDHCSPVQ 310
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG G LGLG + +P KV + V + V+CG T+ ++ G
Sbjct: 181 ELYGWGWGR-YGNLGLG------DRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGG 233
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P L L + I +I+ G H++ALT DGK++ WG+
Sbjct: 234 LYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNK 293
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G + P+ ++ ++ V HI+CG + AVTE+ ++ WG + QLG
Sbjct: 294 FGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLG 350
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 21/176 (11%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEE-GQLW 61
+WGR E +G+LG G +A P+ + AL V +V+CG T +E Q++
Sbjct: 39 SWGRGE-DGQLGHG------DAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVY 91
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG + + P+ + L +RI QIA G H LA+T DG+V SWG +G
Sbjct: 92 SWGCDL------------FTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNG 139
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+A V +A G +AAVTE G+LY WG + LG+
Sbjct: 140 QLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGL 195
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 28 LSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP 86
L P +KAL + + ++CG + +T +G++ +WG N N +LG G P+ +
Sbjct: 97 LFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQ 156
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVT 146
V + +A G H+ A+T+DG+++ WG+G +G LG ++ VP + + +
Sbjct: 157 AFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMV 216
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ACG + +V+ G LY +G +K QLG
Sbjct: 217 KVACGWRHTISVSSSGGLYTYGWSKYGQLG 246
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P K++AL ++ +S G TM LT +G+L+ WG N ++G GD V P +
Sbjct: 256 PHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPH 315
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
+ +++ I+ G H+LA+T+ VFSWG G +GQLGH + ++ +P +IE L+
Sbjct: 316 EQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLS 367
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
R++ I+ G HS+AL V SWG G GQLGH +++ P + AL V + CG
Sbjct: 17 RVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCG 76
Query: 152 GSTSAAVTEK-GKLYMWG 168
+ A +E ++Y WG
Sbjct: 77 ADHTTAYSESFTQVYSWG 94
>gi|46250190|gb|AAH68656.1| MGC81035 protein [Xenopus laevis]
Length = 530
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 80/128 (62%), Gaps = 2/128 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDG 110
++ E+G++++WG N +LG G+ + G P ++ L+ ++I++A G +HS+ALT DG
Sbjct: 88 LLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDG 147
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VFSWGY GQ+G T NQ VP V +L + V IA G ++S A+T+ G +Y WG
Sbjct: 148 EVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVVVSIAAGQTSSMAITDNGHVYGWGY 207
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 208 NGTGQLGL 215
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG + G +LG G G + ++ L V V+CG +M LT +G++
Sbjct: 95 EVYSWGHN-GYSQLG----NGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDGEV 149
Query: 61 WNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG N++ ++G G P K+ +L ++ IA G S+A+TD+G V+ WGY G
Sbjct: 150 FSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVVVSIAAGQTSSMAITDNGHVYGWGYNG 209
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG T NQ +P + + + G + S A++++G LY WG QLG+ G
Sbjct: 210 TGQLGLGNTGNQLMPCRLVFAQPVCIIQVVLGYAHSLALSDQGVLYAWGANSHGQLGI-G 268
Query: 180 LPVVQPCPVE 189
Q PV+
Sbjct: 269 NKSNQTVPVK 278
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 13/184 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA--LPVPVAAVSCGGFFTMVLTEEG 58
E+++WG + G++G G S+P KV + V +++ G +M +T+ G
Sbjct: 148 EVFSWGYNNS-GQVGSGT------TANQSVPRKVSSSLQSKVVVSIAAGQTSSMAITDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG N +LG G+ P L V IIQ+ G HSLAL+D G +++WG
Sbjct: 201 HVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPVCIIQVVLGYAHSLALSDQGVLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST--SAAVTEKGKLYMWGNAKDSQLG 176
HGQLG NQ VP ++ +E + +A ST SAA ++ G++YMWG + L
Sbjct: 261 SHGQLGIGNKSNQTVP--VKVGTNERMVEVAACHSTNISAAKSQSGQVYMWGLCRGQCLL 318
Query: 177 VPGL 180
P L
Sbjct: 319 SPHL 322
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDGKVF 113
T+ +++ +G NS+ LG GD P+ L L +I ++ G G H L +DG+V+
Sbjct: 38 TQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVLCGKKIKDLSYGSGPHILLCNEDGEVY 97
Query: 114 SWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
SWG+ G+ QLG+ T P+ V L + V +ACG S A+T G+++ WG
Sbjct: 98 SWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDGEVFSWGYNNS 157
Query: 173 SQLG 176
Q+G
Sbjct: 158 GQVG 161
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 97/178 (54%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG+++ G+LGLG E P +K+L +P A ++ GG + LT G
Sbjct: 157 DIFSWGQNQ-YGQLGLGL-----EIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D P LL +L +II I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG T A V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVPV-AAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNL 88
P +V AL + AVSCG T+ L ++GQ+++WG ++G + P+ + +L
Sbjct: 75 PEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
DV+I+Q+A G +HSLAL+ D +FSWG +GQLG + + P I++L+ H
Sbjct: 135 SDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAH 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IA GG S A+T G ++ WG K QLG+
Sbjct: 195 IAAGGGHSFALTISGAIFGWGRNKFGQLGL 224
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NTSFGQLGLG---GIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+VFSWG+ +G
Sbjct: 57 TCGCNDLGQLGHDK--SRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYG 114
Query: 122 QLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
Q+G S + +VP I++L+D + +ACG S A+++ ++ WG + QLG+ GL
Sbjct: 115 QIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGL-GL 173
Query: 181 PVVQPC 186
+ + C
Sbjct: 174 EIKKEC 179
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGLTDETDRN------VPALLKSLRSQKIIHICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+LA G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE---ALADEFVTHI 148
+GQLG T N+K P ++ +++V H+
Sbjct: 324 NGQLGTGSTINRKSPFTVKGNWLTYEDYVRHL 355
>gi|307168816|gb|EFN61765.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 538
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 19 GRGPNEAGGLSI--------PSKVKAL-PVPVAAVSCG-GFFTMVLTEEGQLWNWGANSN 68
G G N AG L I P K++ L + +CG G + LTE+G++++WG NS
Sbjct: 47 GLGNNIAGCLGISDAHSTLYPKKIEVLCDKDIKTFACGSGPHVLALTEKGEVYSWGHNSY 106
Query: 69 YELGRGDRVGGWKPKL--LPNL---VDVR-IIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
ELG G G P L +P L ++++ I+ +A G +HSLALT++G+V++WG GQ
Sbjct: 107 CELGNGTCNQGLTPILVNIPTLGAGLNMKCIVDVACGSHHSLALTEEGEVYAWGQNNCGQ 166
Query: 123 LGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+G + + NQ P V LA + + HI+CG ++S VT+ G++Y WG QLG+
Sbjct: 167 VGSNISTNQGSPRQVTSNLAGKKIVHISCGQTSSMVVTDNGEVYGWGYNGVGQLGI 222
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 17/186 (9%)
Query: 1 ELYTWGRD------EGEGRLGLGP--GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTM 52
E+Y+WG + G GL P P GL++ V V+CG ++
Sbjct: 97 EVYSWGHNSYCELGNGTCNQGLTPILVNIPTLGAGLNMKCIVD--------VACGSHHSL 148
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKPK-LLPNLVDVRIIQIANGGYHSLALTDDGK 111
LTEEG+++ WG N+ ++G P+ + NL +I+ I+ G S+ +TD+G+
Sbjct: 149 ALTEEGEVYAWGQNNCGQVGSNISTNQGSPRQVTSNLAGKKIVHISCGQTSSMVVTDNGE 208
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V+ WGY G GQLG NQ P + +L + +ACG + + A++++GKLY+WG
Sbjct: 209 VYGWGYNGVGQLGIGNYVNQMTPSRVGSLIGVVIIKVACGYAHTLALSDEGKLYVWGGNS 268
Query: 172 DSQLGV 177
QLG+
Sbjct: 269 YGQLGI 274
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 1 ELYTWGRDE-GEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+Y WG++ G+ +G N+ + S + + +SCG +MV+T+ G+
Sbjct: 155 EVYAWGQNNCGQ----VGSNISTNQGSPRQVTSNLAG--KKIVHISCGQTSSMVVTDNGE 208
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG G+ V P + +L+ V II++A G H+LAL+D+GK++ WG
Sbjct: 209 VYGWGYNGVGQLGIGNYVNQMTPSRVGSLIGVVIIKVACGYAHTLALSDEGKLYVWGGNS 268
Query: 120 HGQLGHSFTQNQKVPMVIE----ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+GQLG N P+++ ++D H S AV G++YMWGN + +
Sbjct: 269 YGQLGIGNKTNACNPVLVTHEMGRISDIAALHY---NHISTAVGVGGRVYMWGNCRGQSI 325
Query: 176 GVP 178
P
Sbjct: 326 STP 328
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 9/133 (6%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+++ ++ ++ G N LG D PK + L D I A G G H LALT+ G
Sbjct: 37 LLVMKDKSVYGLGNNIAGCLGISDAHSTLYPKKIEVLCDKDIKTFACGSGPHVLALTEKG 96
Query: 111 KVFSWGYGGHGQLGHSFTQNQ-------KVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
+V+SWG+ + +LG+ T NQ +P + L + + +ACG S A+TE+G+
Sbjct: 97 EVYSWGHNSYCELGNG-TCNQGLTPILVNIPTLGAGLNMKCIVDVACGSHHSLALTEEGE 155
Query: 164 LYMWGNAKDSQLG 176
+Y WG Q+G
Sbjct: 156 VYAWGQNNCGQVG 168
>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Ailuropoda melanoleuca]
Length = 348
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQS--TLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDE-GEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEE 57
E++ WG + G+ +G G N+ P KV L + V ++CG +M + +
Sbjct: 148 EVFAWGYNNCGQ----VGSGSTTNQP----TPRKVTNCLHIKRVVGIACGQTSSMAVLDN 199
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG N P I + V AC TSAA T+ G +YMWG + +
Sbjct: 260 NTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVV 319
Query: 177 VPGL 180
+P L
Sbjct: 320 LPHL 323
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTTNQPTP 171
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD+ +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG 176
G +Y WG+ SQLG
Sbjct: 94 GVVYAWGHNGYSQLG 108
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 83/138 (60%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
+ V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D II +A G
Sbjct: 37 IKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIIHVACGE 94
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLGH+ T++ +P +I+ L + + ++CG A+
Sbjct: 95 SHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALA 154
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG + QLG+
Sbjct: 155 ADGQFFTWGQNRHGQLGL 172
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +VK+L +P+A V+ GG + L+ G
Sbjct: 158 QFFTWGQNR-HGQLGLGK-EFPSQAS----PQRVKSLEGIPLAQVAAGGAHSFALSLSGA 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 272 FGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 331
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 332 HTCNVKCPSPVK 343
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LG ++IP +K L + VSCG + M L +GQ
Sbjct: 105 QLFSWGAG-SDGQLG-----HTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQ 158
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG N + +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 159 FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRN 218
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S +++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 219 NAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLG 276
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 19/196 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L+++GQ
Sbjct: 55 EVYTCGLN-TKGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDQGQ 105
Query: 60 LWNWGANSNYELGRG---DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H +AL DG+ F+WG
Sbjct: 106 LFSWGAGSDGQLGHTTTEDSVA--IPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWG 163
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P +++L + +A GG+ S A++ G ++ WG Q
Sbjct: 164 QNRHGQLGLGKEFP-SQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQ 222
Query: 175 LGVPGLPVVQ-PCPVE 189
LG+ Q PC V+
Sbjct: 223 LGLSDETDRQSPCHVK 238
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P+ + D I ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 25 EPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 82
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
AD+ + H+ACG S S A++++G+L+ WG D QLG
Sbjct: 83 ADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLG 118
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 24/177 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LGL +E S P VK L V +SCG T VLT+ G +
Sbjct: 212 VFGWGRNNA-GQLGLS-----DETDRQS-PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 264
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 265 FTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEF----VTHIACGGSTSAAVTEK 161
GQLG T N K P ++ + AD F V HI GG + + K
Sbjct: 325 RGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSFKYHIVKHIFSGGDQTFVLCSK 381
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG E +G+LG G L P V+AL + ++CG + ++ +G+
Sbjct: 3168 KVFSWGEGE-DGKLGHG------NRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGE 3220
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD KPKL+ L R+IQ+A G +LALT+DG VFSWG
Sbjct: 3221 LYTWGLGEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3280
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LG ++ P IE L+ V I CG S A+T G+++ WG +LG
Sbjct: 3281 GDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG 3339
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + A L P V AL V V+CG T+ LTE+
Sbjct: 3220 ELYTWGLGE-YGRLGHG-----DNATQLK-PKLVAALSGRRVIQVACGSRDAQTLALTED 3272
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L + +IQI G SLALT G+V++WG
Sbjct: 3273 GAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGK 3332
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I L V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3333 GDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3391
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 83/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG RG +E G S P +++ L + V + CG F++ LT G++
Sbjct: 3275 VFSWG-DGDFGKLG----RGGSE--GSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEV 3327
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP+ + L R+I +A G H LA+TD G+V++WG H
Sbjct: 3328 WTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDH 3387
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P ++ L V +ACG S S A
Sbjct: 3388 GQQGSGNTFVNKKPALVIGLDAVIVNRVACGSSHSMA 3424
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG + +P ++ L V AV GG + LT +G++++WG +
Sbjct: 3124 GRLGLGVTHN------VPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED 3177
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R KP+L+ L +I IA G HS A++ G++++WG G +G+LGH
Sbjct: 3178 GKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3237
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P ++ AL+ V +ACG + + A+TE G ++ WG+ +LG
Sbjct: 3238 ATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3287
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 84/148 (56%), Gaps = 5/148 (3%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD 90
P+ + P+ +A S F V++++G+++ G +N LG G P LP L
Sbjct: 3089 PTISRLRPIHIAGGSKSLF---VVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQ 3145
Query: 91 --VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
V+ + + +GG H+LALT DGKVFSWG G G+LGH P ++EAL + + I
Sbjct: 3146 YVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDI 3205
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
ACG S SAA++ +G+LY WG + +LG
Sbjct: 3206 ACGSSHSAAISSQGELYTWGLGEYGRLG 3233
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 87/153 (56%), Gaps = 5/153 (3%)
Query: 29 SIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+IP+ + +L V AV+ GG + LT +G+++ WG + +LG G+R+ +PKL+
Sbjct: 4288 AIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLV 4347
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFV 145
+L + + IA G HS A+T G V +WG G +G+LGH +++Q P ++EAL
Sbjct: 4348 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRA 4407
Query: 146 THIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
IACG + + +T+ ++ WG+ +LG
Sbjct: 4408 IDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4440
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 11/170 (6%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWN 62
Y+WG + RLG G + +P+K+++L V +V CG ++ +T G L+
Sbjct: 668 YSWGVGDSR-RLGHG------DCHARELPTKIESLVRLVKSVYCGCSYSAAITLGGNLYT 720
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGGH 120
WG + LG G P ++ L D +++ +A +G H+L LT +G VF+WG G +
Sbjct: 721 WGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDY 780
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
G+LG+ + +P +I+ L V + G S A++ +G+LY WG A
Sbjct: 781 GKLGNGSCNSSLLPQLIDCLPR--VQRVFAGAQFSLALSCEGQLYSWGKA 828
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT+ G +
Sbjct: 4428 VWSWG-DGDYGKLGRGG------SDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAV 4480
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L +II IA G H +A +D G+VF+WG
Sbjct: 4481 YTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDE 4540
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++ AL + + + CG + + A++
Sbjct: 4541 GQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4579
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+ TWG+ GR G LG G ++ P V+AL ++CG T+ +T+
Sbjct: 4373 HVLTWGK----GRYGRLGHGDSEDQLR----PKLVEALLGYRAIDIACGSGDAQTLCITD 4424
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + +I++ G S+ALT G V++WG
Sbjct: 4425 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWG 4484
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LGH ++ + P + AL + + IA G A ++ G+++ WG+ + QLG
Sbjct: 4485 KGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLG 4544
Query: 177 VPGLPVVQ 184
+ +Q
Sbjct: 4545 DGTVTAIQ 4552
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEG 58
LYTWGR GRLG G + +P+ V AL V A+ G T+ LT EG
Sbjct: 718 LYTWGRGT-YGRLGHG------TSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEG 770
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV--RIIQIANGGYHSLALTDDGKVFSWG 116
++ WG +LG G LLP L+D R+ ++ G SLAL+ +G+++SWG
Sbjct: 771 LVFAWGDGDYGKLGNG----SCNSSLLPQLIDCLPRVQRVFAGAQFSLALSCEGQLYSWG 826
Query: 117 YG---GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
GH QL Q VP +I L + + +A G + A++ G+++ WG +
Sbjct: 827 KASCLGH-QLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQ 885
Query: 174 QL 175
Q+
Sbjct: 886 QI 887
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 27/143 (18%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN----- 98
V+C ++L++EG+L+NW KP+ P +D +IAN
Sbjct: 605 VACSEDVVLLLSKEGKLYNWHIA--------------KPEAEPQQLD--FAEIANETFIS 648
Query: 99 -----GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
G H LA+ + +SWG G +LGH +++P IE+L V + CG S
Sbjct: 649 IAAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLV-RLVKSVYCGCS 707
Query: 154 TSAAVTEKGKLYMWGNAKDSQLG 176
SAA+T G LY WG +LG
Sbjct: 708 YSAAITLGGNLYTWGRGTYGRLG 730
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
A C G + + ++WG + LG GD P + +LV + + + G +
Sbjct: 650 AAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLVRL-VKSVYCGCSY 708
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S A+T G +++WG G +G+LGH + +Q +P ++ AL D V +A G + + +T
Sbjct: 709 SAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTS 768
Query: 161 KGKLYMWGNAKDSQLG 176
+G ++ WG+ +LG
Sbjct: 769 EGLVFAWGDGDYGKLG 784
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 60 LWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG N +LG G R+ P L +R +Q+A G A+T DGK+F+ GY
Sbjct: 4216 IYGWGHNHRGQLGGLEGSRIK--TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4273
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG + + +P ++ +L FV +A GG A+T G++Y WG +D +L
Sbjct: 4274 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKL 4333
Query: 176 G 176
G
Sbjct: 4334 G 4334
>gi|340501848|gb|EGR28585.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 612
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 64/183 (34%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-----VAAVSCGGFFTMVLTE 56
LY+WG++ EG++G N I L P + VSCG ++ +T
Sbjct: 133 LYSWGQNT-EGQMGNVYDPKTNNPKHRKIKINFPKLVYPLKDSIIIQVSCGYQHSVAITF 191
Query: 57 EGQLWNWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
G + WG NS+ +LG G + P +PN+ + II ++ G H+LAL + +V+S
Sbjct: 192 NGNVLVWGDNSSSQLGLGINSPNSIYYPVQIPNIQN--IINVSCGSEHTLALDNRNQVYS 249
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG G G LGHS + Q P +I+ D V I CGG S A+T+KG +Y WG + Q
Sbjct: 250 WGNGEGGLLGHSNEEIQASPKIIDKFQDLQVEFIICGGLHSLALTKKGHVYSWGRNEGGQ 309
Query: 175 LGV 177
LG+
Sbjct: 310 LGL 312
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 58/184 (31%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 5 WGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWG 64
WG D +LGLG N + P ++ + + VSCG T+ L Q+++WG
Sbjct: 198 WG-DNSSSQLGLGI----NSPNSIYYPVQIPNIQ-NIINVSCGSEHTLALDNRNQVYSWG 251
Query: 65 ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
LG + PK++ D+++ I GG HSLALT G V+SWG GQLG
Sbjct: 252 NGEGGLLGHSNEEIQASPKIIDKFQDLQVEFIICGGLHSLALTKKGHVYSWGRNEGGQLG 311
Query: 125 HSFTQNQKV-----------PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
NQ V + L FV IA G + S A+ + G+++ WG +
Sbjct: 312 ----LNQDVLKDNLYFCCLPEKICGQLEGVFVKQIAAGDAHSLALAQNGQVFGWGYNING 367
Query: 174 QLGV 177
QLG+
Sbjct: 368 QLGL 371
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 49/139 (35%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y+WG EG G LG NE S K + V + CGG ++ LT++G +
Sbjct: 246 QVYSWGNGEG-GLLG-----HSNEEIQASPKIIDKFQDLQVEFIICGGLHSLALTKKGHV 299
Query: 61 WNWGANSNYELGRGDRV-------GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
++WG N +LG V K+ L V + QIA G HSLAL +G+VF
Sbjct: 300 YSWGRNEGGQLGLNQDVLKDNLYFCCLPEKICGQLEGVFVKQIAAGDAHSLALAQNGQVF 359
Query: 114 SWGYGGHGQLGHSFTQNQK 132
WGY +GQLG Q+ K
Sbjct: 360 GWGYNINGQLGLGQQQSDK 378
Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 93 IIQIANGGYHSLALTDD-GKVFSWGYGGHGQLGHSF---TQNQK-------VPMVIEALA 141
I+QI + + D G ++SWG GQ+G+ + T N K P ++ L
Sbjct: 113 IVQILEKDSSTFSKKDAIGVLYSWGQNTEGQMGNVYDPKTNNPKHRKIKINFPKLVYPLK 172
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
D + ++CG S A+T G + +WG+ SQLG+
Sbjct: 173 DSIIIQVSCGYQHSVAITFNGNVLVWGDNSSSQLGL 208
Score = 39.3 bits (90), Expect = 0.85, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLAL----TDDGKVFSWGYGGHGQLGHSFT-QNQKVPMV 136
PK + + ++ ++ G HSLA T VF+WG HGQLG T QN +
Sbjct: 449 PKRMDCFYQMPVLHLSCGHNHSLAFVLADTKHYMVFAWGMNKHGQLGIGDTGQNSSMARP 508
Query: 137 IEALADEFVTHIACGGSTS 155
I L D +ACG S
Sbjct: 509 ITYLQDIIAYSMACGSYHS 527
>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
Length = 703
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 489 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 543
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 544 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 603
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 604 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 653
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 10/174 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG + +G+LG ++ P ++AL + ++CG + LT G+
Sbjct: 534 KVFSWGEGD-DGKLGHFSRMNCDK------PRLIEALKTKRIRDIACGSSHSAALTSSGE 586
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD KPK++ L+ R+IQ+A G +LALTD+G VFSWG
Sbjct: 587 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 646
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
G G+LG ++ +P IE L + V I CG S A+T+ G ++ WG +
Sbjct: 647 GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGR 700
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 427 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 479
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 480 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 539
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 540 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 599
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
A T KVF WG QLG KVP E L+ V +A G + AVT +GK+
Sbjct: 421 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 480
Query: 165 YMWGNAKDSQLGV 177
Y G A + +LG+
Sbjct: 481 YACGEATNGRLGL 493
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 95/170 (55%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVL-TEEGQLWNWGANSNY 69
G LGLG + E P ++ +L +A +S G +VL T EG+++ WG N+
Sbjct: 62 GCLGLGDIQSTIE------PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYN 115
Query: 70 ELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G G P + NL + ++I++A G YHSL LT DG+VF+WG GQ+G T
Sbjct: 116 QLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGST 175
Query: 129 QNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
NQ +P V L + V +IACG S AV + G++Y+WG + QLG+
Sbjct: 176 ANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGL 225
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG +M + + G
Sbjct: 158 EVFAWGCNNS-GQVGSG------STANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSG 210
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTDDG+V++WG
Sbjct: 211 EVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGAN 270
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + + +
Sbjct: 271 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 330
Query: 178 PGL 180
P L
Sbjct: 331 PHL 333
>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
Length = 345
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++ L + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQS--TLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDE-GEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEE 57
E++ WG + G+ +G G N+ P KV L + V ++CG +M + +
Sbjct: 148 EVFAWGYNNCGQ----VGSGSTANQP----TPRKVTNCLHIKRVVGIACGQTSSMAVLDN 199
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG N P I + V AC TSAA T+ G +YMWG + +
Sbjct: 260 NTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVI 319
Query: 177 VPGL 180
+P L
Sbjct: 320 LPHL 323
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T++ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TDD +VF +G LG Q+ VP +E L+ + + ++ G G TE
Sbjct: 34 ALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ +Q C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVC 122
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N +P ++ L V + CG F++ LT+ G +
Sbjct: 3114 VFSWG-DGDFGKLGRGGSEGCN------VPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3166
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3167 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3226
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3227 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3265
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 2962 GRLGLGIS-----SGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3016
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3017 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3076
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3077 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3126
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 96/189 (50%), Gaps = 9/189 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFF--TMVLTEEG 58
ELYTWGR RL G +S + K + SCG F T+ E G
Sbjct: 502 ELYTWGRG-NYXRLDHGRSAMNEILIMISGLDRQKFI-----YKSCGIRFAQTLAFYENG 555
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
Q+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 556 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 615
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 616 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFD 674
Query: 179 GLPVVQPCP 187
L V +P P
Sbjct: 675 TLRVTKPEP 683
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G R +P+++ +L
Sbjct: 3969 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESL 4028
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
V ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 4029 RGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 4088
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4089 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4118
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2900 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2952
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 2953 VYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWG 3012
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3013 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3072
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3059 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3111
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3112 GLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3171
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3172 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3230
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4051 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4103
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4104 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4163
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4164 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4222
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4106 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4158
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4159 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4218
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4219 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4255
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 446 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 503
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGYG 118
+ WG + L G ++ L + I + G +LA ++G+V+SWG G
Sbjct: 504 YTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDG 563
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 564 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 621
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 556 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 608
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 609 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 668
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 669 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 706
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 16/135 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G ++ NS+ P+L+ L I++IA +
Sbjct: 384 VTQIACAEKRFLILSRNGCVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 433
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 434 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 493
Query: 155 SAAVTEKGKLYMWGN 169
SAA+T +G+LY WG
Sbjct: 494 SAAITAEGELYTWGR 508
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 427 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 485
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG--G 152
IA G +S A+T +G++++WG G + +L H + ++ ++I L + + +CG
Sbjct: 486 HIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRF 545
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + A E G+++ WG+ +LG
Sbjct: 546 AQTLAFYENGQVWSWGDGDYGKLG 569
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3892 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3951
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3952 GAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4011
Query: 176 G 176
G
Sbjct: 4012 G 4012
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2883 LIRKKAAGLESTA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2941
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 2942 KSLFAVTVEGKVYACGEATNGRLGL 2966
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 99/180 (55%), Gaps = 13/180 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
+YT G ++ G+LG G P+ + AL + VSCG + +V+ ++ Q+
Sbjct: 55 VYTCGSND-YGQLGQDKGHKR--------PTVITALDTQSIQQVSCGDYHNLVVNDKYQV 105
Query: 61 WNWGANSNYELGRGDRVGG---WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++WG + +LG GG +P+++ L ++I+Q+A GG HSLAL++DG++FSWG
Sbjct: 106 FSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGN 165
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
HGQLG T+NQ P + +L I GGS S +++ G ++ +G QLG+
Sbjct: 166 NSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGL 225
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 10/191 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG G LGLG G E L+ + + VSCG T+ + EG ++
Sbjct: 1 MFCWGAARN-GELGLG---GIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G+N +LG+ G +P ++ L I Q++ G YH+L + D +VFSWGY G
Sbjct: 57 TCGSNDYGQLGQDK--GHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCG 114
Query: 122 QLGHSFT---QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
QLGH+ N + P +++ L+ + +ACGG S A++ G+++ WGN QLG+
Sbjct: 115 QLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGI- 173
Query: 179 GLPVVQPCPVE 189
G QP P E
Sbjct: 174 GSTKNQPKPQE 184
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 5/177 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG D+ G+LG G N + P VK L + + V+CGG ++ L+ +G+
Sbjct: 104 QVFSWGYDDC-GQLGHTLEAGGNNSRR---PRMVKELSSLQIVQVACGGKHSLALSNDGR 159
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG NS+ +LG G KP+ L +L + QI GG HS L+ G VF +G
Sbjct: 160 IFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNT 219
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG T ++K P +++L VTHI+CG +A +T G + +G QLG
Sbjct: 220 FGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLG 276
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 9/181 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++WG + G+LG+G + + P ++ +L +P + GG + VL++ G
Sbjct: 159 RIFSWGNN-SHGQLGIGSTKNQPK------PQELTSLTGIPFCQIVAGGSHSFVLSKSGA 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ +G N+ +LG GD P + +L +++ I+ G H+ LT DG V ++G G
Sbjct: 212 VFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGS 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
+GQLGH+ ++ +P + L VT +ACG T A V G++Y +G + QLG
Sbjct: 272 YGQLGHNSNNHEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSK 331
Query: 179 G 179
G
Sbjct: 332 G 332
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ +GR+ G+LGLG + G P+ VK+L + V +SCG T VLT +G +
Sbjct: 212 VFGFGRNTF-GQLGLG------DTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGV 264
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+GA S +LG P+ + L+ + + Q+A G H++A + G+++S+G GG
Sbjct: 265 LTFGAGSYGQLGHNSNNHEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGG 324
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N P+ ++
Sbjct: 325 NGQLGSKGTTNCNTPITVD 343
>gi|440290324|gb|ELP83750.1| guanine nucleotide exchange factor, putative [Entamoeba invadens
IP1]
Length = 965
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 60/174 (34%), Positives = 98/174 (56%), Gaps = 10/174 (5%)
Query: 1 ELYTWGR--DEGEGRLGLGP----GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
ELY GR D+ + + L P R ++ +S+P++++ + + VS G FF M+L
Sbjct: 54 ELYITGRVFDQTQHGVSLFPYSVCARS-RDSDVVSVPTRIEGINFVIDKVSMGSFFCMLL 112
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
++ G+L+ WG+ S +LG D KP+L+P L ++ ++ G H+LAL G++FS
Sbjct: 113 SK-GRLYTWGSFSFGQLGIPDARIFNKPELVPQLSGIQ--DVSCGSCHTLALNVWGEIFS 169
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
WG +GQLG S +Q +P IE + VT I G SA +T++G ++WG
Sbjct: 170 WGQDDYGQLGRSRSQKNDIPTDIEFFRNHVVTKIFTGAFCSACITDEGMAFIWG 223
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
++ I +++ G + + L+ G++++WG GQLG + P ++ L+ + +
Sbjct: 95 INFVIDKVSMGSFFCMLLSK-GRLYTWGSFSFGQLGIPDARIFNKPELVPQLSG--IQDV 151
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+CG + A+ G+++ WG QLG
Sbjct: 152 SCGSCHTLALNVWGEIFSWGQDDYGQLG 179
>gi|46249868|gb|AAH68834.1| LOC398469 protein [Xenopus laevis]
Length = 530
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 80/128 (62%), Gaps = 2/128 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDG 110
++ E+G++++WG N +LG G+ + G P ++ L+ ++IQ+A G +HS+ALT DG
Sbjct: 88 LLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDG 147
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VFSWGY GQ+G T NQ VP V +L + V I+ G ++S A+T+ G +Y WG
Sbjct: 148 EVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNGHVYGWGY 207
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 208 NGTGQLGL 215
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 7/190 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG + G +LG G G + ++ L V V+CG +M LT +G++
Sbjct: 95 EVYSWGHN-GYSQLG----NGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDGEV 149
Query: 61 WNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG N+ ++G G P K+ +L ++ I+ G S+ALTD+G V+ WGY G
Sbjct: 150 FSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNGHVYGWGYNG 209
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG T NQ +P + + + G + + A++++G LY WG QLG+ G
Sbjct: 210 TGQLGLGNTGNQLMPCRLVFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGI-G 268
Query: 180 LPVVQPCPVE 189
Q PV+
Sbjct: 269 NKSNQTVPVK 278
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA--LPVPVAAVSCGGFFTMVLTEEG 58
E+++WG + G++G G S+P KV + V ++S G +M LT+ G
Sbjct: 148 EVFSWGYNNC-GQVGSGT------TANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG N +LG G+ P L + IIQ+ G H+LAL+D G +++WG
Sbjct: 201 HVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPICIIQVVLGYAHTLALSDQGVLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST-SAAVTEKGKLYMWGNAKDSQLGV 177
HGQLG NQ VP+ + + V AC + SAA ++ G++YMWG + L
Sbjct: 261 SHGQLGIGNKSNQTVPVKV-GTNERMVEVTACHSTNISAAKSQSGQVYMWGLCRGQCLLS 319
Query: 178 PGL 180
P L
Sbjct: 320 PHL 322
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 46 CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSL 104
C + T+ +++ +G N + LG GD P+ L L +I+ ++ G G H L
Sbjct: 29 CSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHIL 88
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGK 163
+DG+V+SWG+ G+ QLG+ T P+ V L + V +ACG S A+T G+
Sbjct: 89 LCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDGE 148
Query: 164 LYMWGNAKDSQLG 176
++ WG Q+G
Sbjct: 149 VFSWGYNNCGQVG 161
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 97/178 (54%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG+++ G+LGLG E P +K+L +P A ++ GG + LT G
Sbjct: 157 DIFSWGQNQ-YGQLGLGL-----EIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D P LL +L +II I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG T A V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVPV-AAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNL 88
P +V AL + AVSCG T+ L ++GQ+++WG ++G + P+ + +L
Sbjct: 75 PEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
DV+I+Q+A G +HSLAL+ D +FSWG +GQLG + + P I++L+ H
Sbjct: 135 SDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAH 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IA GG S A+T G ++ WG K QLG+
Sbjct: 195 IAAGGGHSFALTISGAIFGWGRNKFGQLGL 224
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NTSFGQLGLG---GIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+VFSWG+ +G
Sbjct: 57 TCGCNDLGQLGHDK--SRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYG 114
Query: 122 QLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
Q+G S + +VP I++L+D + +ACG S A+++ ++ WG + QLG+ GL
Sbjct: 115 QIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGL-GL 173
Query: 181 PVVQPC 186
+ + C
Sbjct: 174 EIKKEC 179
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGLTDETDRN------VPALLKSLRSQKIIHICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+LA G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE---ALADEFVTHI 148
+GQLG T N+K P ++ +++V H+
Sbjct: 324 NGQLGTGSTINRKSPFTVKGNWLTYEDYVRHL 355
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 14/181 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNE----AGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
+YTWG ++ G+LG G + N L++PS V +++CG F T+ + E
Sbjct: 110 IYTWGENKA-GQLGTGDLKSSNSPVLIDSALNLPS--------VLSIACGEFHTVAICIE 160
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +W+WG N +LG G+ + P + + I+ A GG H+L LTD K+++WG
Sbjct: 161 GTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGS 220
Query: 118 GGHGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG + + + P +++ L H+ CG S S A+ + ++Y WG QLG
Sbjct: 221 NAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLG 280
Query: 177 V 177
+
Sbjct: 281 L 281
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 24/189 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
+++WGR++ G+LG G + P + G++ ++A +CGG T+VLT+
Sbjct: 163 IWSWGRNQC-GQLGHGNTKTCYFPTQVVGMAKKICIRA--------ACGGQHTLVLTDAN 213
Query: 59 QLWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+++ WG+N+ +LG R D+ +P ++ +L + G HS+AL + ++++WG
Sbjct: 214 KIYAWGSNAYGQLGLNRSDK-AVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWG 272
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV----TEKG-----KLYMW 167
GQLG + VP ++ AL V IACG A E G +Y W
Sbjct: 273 RNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPLEHVYSW 332
Query: 168 GNAKDSQLG 176
G ++ QLG
Sbjct: 333 GRGEEGQLG 341
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 95/183 (51%), Gaps = 16/183 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-----VAAVSCGGFFTMVLTE 56
+Y+WG+++ G+LGLG + +P+ + +L P V ++ G + V+ E
Sbjct: 1 VYSWGKNK-YGQLGLG------HTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAE 53
Query: 57 EGQLWNWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
+G ++ WG +LG D V +P ++P + + +A G H++ +TD+G +++
Sbjct: 54 DGDVYTWGRGWEGQLGH-DVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYT 112
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
WG GQLG ++ P++I+ AL V IACG + A+ +G ++ WG +
Sbjct: 113 WGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCG 172
Query: 174 QLG 176
QLG
Sbjct: 173 QLG 175
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVFSW 115
+++WG N +LG G P + +L D + I G HS + +DG V++W
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60
Query: 116 GYGGHGQLGHSF-TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G G GQLGH T+ + P ++ + + + +ACG + + VT+ G +Y WG K Q
Sbjct: 61 GRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAGQ 120
Query: 175 LGVPGL 180
LG L
Sbjct: 121 LGTGDL 126
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 67/148 (45%), Gaps = 16/148 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAA-VSCGGFFTMVLTEEGQ 59
++Y WG + G+LGL + P V L A V CG +M L + Q
Sbjct: 214 KIYAWGSN-AYGQLGLN-----RSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQ 267
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG--------- 110
++ WG N +LG G P+L+ L VR+ QIA G H +A D
Sbjct: 268 IYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPLE 327
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIE 138
V+SWG G GQLGH+ ++ P ++E
Sbjct: 328 HVYSWGRGEEGQLGHNELLSRCTPRIVE 355
>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
[Papio anubis]
Length = 355
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++ L + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQS--TLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDE-GEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEE 57
E++ WG + G+ +G G N+ P KV L + V ++CG +M + +
Sbjct: 148 EVFAWGYNNCGQ----VGSGSTANQP----TPRKVTNCLHIKRVVGIACGQTSSMAVLDN 199
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG N P I + V AC TSAA T+ G +YMWG + +
Sbjct: 260 NTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVI 319
Query: 177 VPGL 180
+P L
Sbjct: 320 LPHL 323
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T++ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TDD +VF +G LG Q+ VP +E L+ + + ++ G G TE
Sbjct: 34 ALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG 176
G +Y WG+ SQLG
Sbjct: 94 GVVYAWGHNGYSQLG 108
>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
Length = 432
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 94/182 (51%), Gaps = 11/182 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++TWG EG LG G E P KV++L V V+CG FT+ + E G L
Sbjct: 214 EVWTWGNGY-EGELGHG------EKNSQYQPKKVQSLTEKVVDVACGRDFTIFVCESG-L 265
Query: 61 WNWGANSNYELGRGDRVGG---WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ GA+ +LG G G P+ L ++ I+ G YH AL DG V++WG
Sbjct: 266 YSCGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGL 325
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G GQLGH + + ++ L + + +ACGG +AAVT+ G LY WG +D QLG
Sbjct: 326 GREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLGR 385
Query: 178 PG 179
G
Sbjct: 386 GG 387
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 10/167 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
G+LG G R + P V+AL + V+ G T ++ +G ++ WG+ +
Sbjct: 69 GQLGQGHERPADR------PFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGK 122
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG D P+L+ L I++++ GG H A+ DG ++ WG G T++
Sbjct: 123 LGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYCWGRAASA--GSGGTEH 180
Query: 131 QKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+P +I+ L E V ++CG S +AAVTEKG+++ WGN + +LG
Sbjct: 181 VFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELG 227
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 64/111 (57%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L +G N +LG+G +P + L RI+ +A G + A++ DG V++WG G
Sbjct: 60 LTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGE 119
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+G+LGH+ N+ +P ++EAL + + ++ GG+ AA+ + G LY WG A
Sbjct: 120 YGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYCWGRA 170
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
AL + + ++G GQLG + P +EAL+ + + ++A G S +AA++ G +
Sbjct: 53 ALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDV 112
Query: 165 YMWGNAKDSQLG 176
Y WG+ + +LG
Sbjct: 113 YTWGSGEYGKLG 124
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 2399 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2451
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 2452 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDH 2511
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G+ T + P +++ L + +T +ACG S S A
Sbjct: 2512 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2548
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 2247 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2301
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 2302 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2361
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 2362 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 2411
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2185 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2237
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 2238 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 2297
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 2298 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 2357
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 3261 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 3320
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ +A GG HS +T G +++WG G +G+LGHS +++Q P +++AL V +ACG
Sbjct: 3321 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSG 3380
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 3381 DAQTLCLTDDDTVWSWGDGDYGKLG 3405
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 2344 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 2396
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 2397 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2456
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 2457 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2515
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V AL V V+CG T+ LT++
Sbjct: 3338 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDD 3390
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 3391 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 3450
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G Y WG+ + QLG
Sbjct: 3451 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTWGDNDEGQLG 3508
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 3393 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3445
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG ++WG
Sbjct: 3446 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTWGDNDE 3504
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 3505 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3541
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3179 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 3238
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 3239 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 3298
Query: 176 G 176
G
Sbjct: 3299 G 3299
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%)
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
A T KVF WG QLG KVP E L+ V +A G + AVT +GK+
Sbjct: 2179 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2238
Query: 165 YMWGNAKDSQLGV 177
Y G A + +LG+
Sbjct: 2239 YACGEATNGRLGL 2251
>gi|114598774|ref|XP_001175007.1| PREDICTED: E3 ISG15--protein ligase HERC5-like, partial [Pan
troglodytes]
Length = 207
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N + +LG G + P+++ +L V + QI+ G
Sbjct: 44 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 103
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ G ++SWG GQLG T+++ P +IE L ++ V +ACGGS SA +T
Sbjct: 104 EAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLT 163
Query: 160 EKGKLYMWGNAKDSQLGVPGLP-VVQPCPV 188
+ G L+ +G K QLG ++PC V
Sbjct: 164 QDGLLFTFGAGKHGQLGHNSTQNELRPCLV 193
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 88/152 (57%), Gaps = 7/152 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + P+ + P V+ L VP+A +S G +M L+ G
Sbjct: 62 ELFAWGQNL-HGQLGVGR-KFPST----TTPQIVEHLAGVPLAQISAGEAHSMALSMSGN 115
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + ++ +A GG HS LT DG +F++G G
Sbjct: 116 IYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGK 175
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
HGQLGH+ TQN+ P ++ L + VT IACG
Sbjct: 176 HGQLGHNSTQNELRPCLVAELVEYRVTQIACG 207
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 14/141 (9%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
+ + +V G ++L+ +G+ + + NY + + L + +IIQI
Sbjct: 1 MKIHSVDQGAEHMLILSSDGKPFEY---DNYSMKH--------LRFESILQEKKIIQITC 49
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
G YHSLAL+ G++F+WG HGQL G F + P ++E LA + I+ G + S
Sbjct: 50 GDYHSLALSKGGELFAWGQNLHGQLGVGRKFP-STTTPQIVEHLAGVPLAQISAGEAHSM 108
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
A++ G +Y WG + QLG+
Sbjct: 109 ALSMSGNIYSWGKNEFGQLGL 129
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D G+LGL G + +P +V P + + CG F+++LT+EG+++
Sbjct: 3138 LWAWG-DGSFGKLGLKDGSSSTD-----VPVQVITFPSNIIQIECGMHFSVLLTKEGKVY 3191
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG Y LG P L+ L I Q+A G H LALT G+V+SWG HG
Sbjct: 3192 TWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHG 3251
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
Q G++ T + P ++ +L + IACG S S A +
Sbjct: 3252 QQGNNSTICNRKPQIVASLKGHRICKIACGSSHSIAFAQ 3290
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG RG NE G +P K+ +L V + CG F+M LT G +
Sbjct: 4050 VFSWG-DGDYGKLG----RGGNE--GSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHV 4102
Query: 61 WNWGANSNYELGRGDRVGGWKPK-LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG Y LG GD P+ +L L +I I G H + T+ GKVFSWG
Sbjct: 4103 YTWGKGDYYRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDND 4162
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
GQ+G+ TQ VP I + + H+ACG + S A + K +
Sbjct: 4163 EGQIGNDTTQAVSVPKRINITDNICIDHVACGSAHSIAWSSKQR 4206
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG+ G LG+G + P+ V AL + +S G + +TE+G
Sbjct: 528 KVYSWGQGSN-GVLGIGNTESQ------TAPTAVAALSGDRIVHISAGSMHSAAVTEDGV 580
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQI--ANGGYHSLALTDDGKVFSWGY 117
L+ WG S LG G+ P ++ L V+I+Q+ +G H+LAL D G+V+SWG
Sbjct: 581 LYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGD 640
Query: 118 GGHGQLGHSFTQNQKVPMVIEAL-ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +G+LG + KVP I + + V I CG S A+T+ GKLY WG QLG
Sbjct: 641 GDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGDTYQLG 700
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
Query: 10 GEGRLGLGPGRGPNEAGGLSIPS-KVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLG+G N A + S + + V A+ GG + +T +G+L+ WG +
Sbjct: 3895 AHGRLGIGSS--DNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGED 3952
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G V P L+ +L +I G HS +TDDG +++WG G +G+LGH+
Sbjct: 3953 GKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDH 4012
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+ Q P ++ AL E VT +ACG + + T G ++ WG+ +LG
Sbjct: 4013 ETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLG 4062
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTE-EG 58
EL+TWG+ +GRLG G ++ + P V+AL V ++ V+CG L +
Sbjct: 3084 ELFTWGQG-ADGRLGHG------DSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDN 3136
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
LW WG S +LG D + IIQI G + S+ LT +GKV++WG G
Sbjct: 3137 SLWAWGDGSFGKLGLKDGSSSTDVPVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKG 3196
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ +LG+ T Q +P +++ LA + +T +A G A+T G++Y WG+ + Q G
Sbjct: 3197 EYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQG 3254
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEEG 58
LYTWG+ GRLG G A IP+ V+ L V + V CG T+ L + G
Sbjct: 581 LYTWGKG-SYGRLGHG------NAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTG 633
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-IIQIANGGYHSLALTDDGKVFSWGY 117
Q+W+WG +LGR PK + + +++I G S+ALT DGK++SWG
Sbjct: 634 QVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGC 693
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G QLGH ++ + P +IE L++ V+ ++ G A+T +Y WG ++
Sbjct: 694 GDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGKNSSFEVNE 753
Query: 178 PGLPVVQPCPVE 189
G + P +E
Sbjct: 754 SGDIISSPLMIE 765
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEEG 58
LYTWG+ GR G G N+ P V AL V V+CG T+ T G
Sbjct: 3996 LYTWGK----GRYG---RLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASG 4048
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG +LGRG G PK + +L +I++ G S+ALT G V++WG G
Sbjct: 4049 CVFSWGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKG 4108
Query: 119 GHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ +LGH +Q+ P V+ LA E V I CG TE GK++ WG+ + Q+G
Sbjct: 4109 DYYRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIG 4167
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 10/136 (7%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD------VRIIQIANGG 100
G + V++++G+++ G S+ LG +GG+ +P+ + VR + ++ G
Sbjct: 2966 GSKCSFVVSDDGKVFACGEGSSGRLG----IGGFANIRMPHQISSLSMYVVRKVAVSCAG 3021
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
H LA+T DGKVFSWG G +GQLGH Q+ P +IE + + ++CG SAAV+
Sbjct: 3022 RHVLAVTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSV 3081
Query: 161 KGKLYMWGNAKDSQLG 176
G+L+ WG D +LG
Sbjct: 3082 NGELFTWGQGADGRLG 3097
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
G + LT++G++++WG SN LG G+ P + L RI+ I+ G HS A+
Sbjct: 516 SGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAV 575
Query: 107 TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKL 164
T+DG +++WG G +G+LGH +++ +P ++E L + + CG + + A+ + G++
Sbjct: 576 TEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQV 635
Query: 165 YMWGNAKDSQLGVPG 179
+ WG+ +LG PG
Sbjct: 636 WSWGDGDYGKLGRPG 650
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 12 GRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLG+G R P++ LS+ V AVSC G + +T +G++++WG
Sbjct: 2988 GRLGIGGFANIRMPHQISSLSM------YVVRKVAVSCAGRHVLAVTADGKVFSWGDGQY 3041
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G +PK++ I +++ G HS A++ +G++F+WG G G+LGH +
Sbjct: 3042 GQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDS 3101
Query: 129 QNQKVPMVIEALADEFVTHIACGGSTSAAVTE-KGKLYMWGNAKDSQLGVPGLPVVQPCP 187
NQ P ++ AL ++ +ACG + + L+ WG+ +LG+ P
Sbjct: 3102 NNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSSSTDVP 3161
Query: 188 VE 189
V+
Sbjct: 3162 VQ 3163
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 20/162 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
++++WG D G+LG PG N+ +P + + PV + CG +M LT++G
Sbjct: 634 QVWSWG-DGDYGKLG-RPGSDQNK-----VPKPISGIGSTSPVVKIICGNQISMALTKDG 686
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+L++WG Y+LG G++ +PKL+ L + + ++ G H +ALT D V++WG
Sbjct: 687 KLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGKN 746
Query: 119 GHGQLGHSFTQNQ-----KVPMVIEALADEFVTHIACGGSTS 155
SF N+ P++IEA + + IACG S +
Sbjct: 747 S------SFEVNESGDIISSPLMIEAASGKGALLIACGASET 782
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 90 DVRIIQIAN--GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
D IIQI + G H LALT DGKV+SWG G +G LG T++Q P + AL+ + + H
Sbjct: 505 DEEIIQIDHNPSGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVH 564
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
I+ G SAAVTE G LY WG +LG
Sbjct: 565 ISAGSMHSAAVTEDGVLYTWGKGSYGRLG 593
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 8/124 (6%)
Query: 60 LWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG N +LG G++V P+L +L ++ I G A+TDDGKV++ GY
Sbjct: 3836 VFGWGHNHRGQLGGIEGNKVKS--PRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGY 3893
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVT----HIACGGSTSAAVTEKGKLYMWGNAKDS 173
HG+LG + N P + +LA + I GG AVT +G+LY WG +D
Sbjct: 3894 AAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDG 3953
Query: 174 QLGV 177
+LG+
Sbjct: 3954 KLGL 3957
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
T +++ WG N +LG K P L + IQ A G S ++DDGKVF
Sbjct: 2921 THGNKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVF 2980
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA--CGGSTSAAVTEKGKLYMWGNAK 171
+ G G G+LG N ++P I +L+ V +A C G AVT GK++ WG+ +
Sbjct: 2981 ACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQ 3040
Query: 172 DSQLG 176
QLG
Sbjct: 3041 YGQLG 3045
>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
porcellus]
Length = 531
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 90/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + V R++ IA G S+A+ D G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ PM + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPMRVAALHRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGYNGNGQLGL 215
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L V V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHVKRVVGIACGQTSSMAVLDSG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPMRVAALHRVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC + SAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLNPEHIMVEKERVVEIAACHSTHISAAKTQGGHVYMWGQCRGQSVTL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD+ +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ +Q C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVC 122
>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
Length = 1719
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
+ +SC + +++ G L+ WG N LG GD + PK + +L I+ ++ GG
Sbjct: 305 IIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLGG 364
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+ALT G+VFSWG G +GQLGH +FT Q P I+A ++ + I+ GG S A+
Sbjct: 365 GHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAID 424
Query: 160 EKGKLYMWGNAKDSQLGV 177
G ++ WG LGV
Sbjct: 425 TNGSMFAWGRGDYGVLGV 442
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 25/194 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
LYTWGR + GRLG G ++ S P +V +L + +S GG +M LT+ G++
Sbjct: 324 LYTWGRGD-NGRLGHG------DSLMQSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEV 376
Query: 61 WNWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG N +LG G PK + + I I+ GGYHS+A+ +G +F+WG G
Sbjct: 377 FSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGD 436
Query: 120 HGQLGHSFTQNQ----KVPMVIE------------ALADEFVTHIACGGSTSAAVTEKGK 163
+G LG S + + P++I+ + A E +++ G + A TE G
Sbjct: 437 YGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGD 496
Query: 164 LYMWGNAKDSQLGV 177
LY WG ++LG+
Sbjct: 497 LYSWGCGSGNRLGL 510
Score = 72.4 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 40/211 (18%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LYTWG D G+LG G +E + +L V +V+ GG T+ LT G ++
Sbjct: 182 LYTWG-DGLLGKLGHGTLESYSEPRLVEFFETKPSLRV--VSVANGGKHTVALTVCGNVY 238
Query: 62 NWGANSNYELGRGDRVGGW--KPKLL---------------------------------- 85
++G N + +LG G+ + P+L+
Sbjct: 239 SFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMSNSTSTLFNKQQQQS 298
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFV 145
N +D RII+++ S A++ G +++WG G +G+LGH + Q P + +L +
Sbjct: 299 SNKID-RIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTI 357
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
++ GG S A+T++G+++ WG ++ QLG
Sbjct: 358 VDMSLGGGHSMALTKRGEVFSWGRGENGQLG 388
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 45/196 (22%)
Query: 33 KVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL------P 86
++ L V +S G T ++T++G L+ WG +LG G +P+L+ P
Sbjct: 155 RIDFLKEKVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKP 214
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG------HSFTQNQKVP------ 134
+L R++ +ANGG H++ALT G V+S+G QLG ++ Q V
Sbjct: 215 SL---RVVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQS 271
Query: 135 ----------MVIEALADEF-------------VTHIACGGSTSAAVTEKGKLYMWGNAK 171
++ + + F + ++C + SAA+++ G LY WG
Sbjct: 272 LSNSNSSSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGD 331
Query: 172 DSQLGVPGLPVVQPCP 187
+ +LG G ++Q P
Sbjct: 332 NGRLG-HGDSLMQSTP 346
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 23/151 (15%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WGR E G+LG G P +++A + +S GG+ ++ + G
Sbjct: 375 EVFSWGRGE-NGQLGHGTFTSQQMT-----PKQIQAFQNKTIKVISAGGYHSIAIDTNGS 428
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV----------------RIIQIANGGYHS 103
++ WG LG + P L+ R I +++G H+
Sbjct: 429 MFAWGRGDYGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHN 488
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVP 134
+A T++G ++SWG G +LG + +NQ +P
Sbjct: 489 VAQTENGDLYSWGCGSGNRLGLANEENQLIP 519
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 106/184 (57%), Gaps = 11/184 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+ G ++ G+LG PN+ P + AL + CG ++ LT GQ
Sbjct: 367 KMYSCGNND-HGQLGHDVESLPNKR-----PQLLTALENYIITQACCGTAHSLALTNWGQ 420
Query: 60 LWNWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG+N+ +LG+ D P+L+ ++ +++QIA G YH LALT+ G++++WG
Sbjct: 421 VYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSN 480
Query: 119 GHGQLGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG T N+KV P ++++LA + IACGG+ S AV++ G ++ WG QLG
Sbjct: 481 AYGQLGLGMT-NEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 539
Query: 177 VPGL 180
+ L
Sbjct: 540 LNDL 543
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG + G+LGLG NE +S P+ V++L VP+A ++CGG + +++ G
Sbjct: 473 ELYAWGSN-AYGQLGLG---MTNEK--VSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGA 526
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + + ++ G S+ LT G VF+ G G
Sbjct: 527 IFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGT 586
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH N+ +P ++ L +T IACG T A V +GK+Y +G + QLG+
Sbjct: 587 FGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGI 645
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANG 99
+A +CG T++LT +G++++ G N + +LG + + +P+LL L + I Q G
Sbjct: 349 IARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCG 408
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
HSLALT+ G+V+SWG GQLG + T Q +P +I ++A + V IA G A+
Sbjct: 409 TAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLAL 468
Query: 159 TEKGKLYMWGNAKDSQLGV 177
T G+LY WG+ QLG+
Sbjct: 469 TNSGELYAWGSNAYGQLGL 487
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL N+ P++++ L + V VSCG F++ LT G +
Sbjct: 527 IFGWGKNTF-GQLGL------NDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGV 579
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA + +LG G P+++ L+ +I QIA G H+LA GK++ +G G
Sbjct: 580 FTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSG 639
Query: 120 HGQLGHSFTQNQKVPMVIE 138
GQLG N P ++
Sbjct: 640 VGQLGIGIVGNYNTPQIVR 658
>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 2305
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/144 (34%), Positives = 82/144 (56%), Gaps = 11/144 (7%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYE-----LGRGDRVGGWKPKLLPNLVDV--RI 93
+ ++SCG +++ LTE G ++ WG S LG G + +LLP V+ I
Sbjct: 579 ICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGT----FDDQLLPQKVESLQEI 634
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
+ I+ G YHS A+ +G++ +WG G GQLGH NQ +P V++++ +VT + CG
Sbjct: 635 VVISIGFYHSAAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEK 694
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGV 177
+ +T+ GK++ WG ++ QLG+
Sbjct: 695 HTICLTKNGKVFTWGTSEYGQLGL 718
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 8/188 (4%)
Query: 1 ELYTWGRDEGEGR--LGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
++Y WGR + LG G ++ +P KV++L + +S G + + + G
Sbjct: 597 DVYMWGRGSVKNPPIATLGNGTFDDQL----LPQKVESLQ-EIVVISIGFYHSAAVKSNG 651
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+L WG + +LG GD PK++ ++ + Q+ G H++ LT +GKVF+WG
Sbjct: 652 ELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTS 711
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN-AKDSQLGV 177
+GQLG TQ PM++ +L + IACG + +A +T ++ ++GN A +
Sbjct: 712 EYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNGAAMGSANI 771
Query: 178 PGLPVVQP 185
+P++ P
Sbjct: 772 ISIPIMVP 779
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/146 (36%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
Query: 14 LGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
L G G A +SIP V +L + + +SCG + T LTE G ++ WG S ELG
Sbjct: 758 LVFGNGAAMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWG--SGQELG 815
Query: 73 RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
G PKL+ L + I QI+ GG H LTD GK+++ G GQLGH+ +Q
Sbjct: 816 HGHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGHA-AGDQN 874
Query: 133 VPMVIEALADEFVTHIACGGSTSAAV 158
P I++L I+CG + +AA+
Sbjct: 875 RPKKIDSLLKTTFMSISCGENHNAAL 900
Score = 79.0 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 64/225 (28%), Positives = 95/225 (42%), Gaps = 58/225 (25%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
EL TWG E +G+LG G + IP V+++ V V CG T+ LT+ G+
Sbjct: 652 ELLTWGCGE-DGQLGHG------DVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGK 704
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH----------------- 102
++ WG + +LG GD P L+ +L IIQIA G H
Sbjct: 705 VFTWGTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNGA 764
Query: 103 -------------------------------SLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
+ ALT+ G V++WG G +LGH ++
Sbjct: 765 AMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSGQ--ELGHGHGTSE 822
Query: 132 KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
P ++E L ++ + I+CGG A +T+ GK+Y G QLG
Sbjct: 823 AHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLG 867
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 10/135 (7%)
Query: 60 LWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
L WG+ S +LG ++ P+ LPN I I+ G Y+S ALT++G V+ WG
Sbjct: 544 LMTWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGR 603
Query: 118 GGH-----GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
G LG+ +Q +P +E+L + V I+ G SAAV G+L WG +D
Sbjct: 604 GSVKNPPIATLGNGTFDDQLLPQKVESLQEIVV--ISIGFYHSAAVKSNGELLTWGCGED 661
Query: 173 SQLGVPGLPVVQPCP 187
QLG G QP P
Sbjct: 662 GQLG-HGDVFNQPIP 675
>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
Length = 903
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 64/181 (35%), Positives = 95/181 (52%), Gaps = 12/181 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG G+LG P + +SIPS + A + ++CG ++ L E G +
Sbjct: 229 VYSWGLCS-YGKLG-----HPTK-NDISIPSMISAFKNKQITQIACGKDHSLALDEIGVV 281
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG S LG G+ PK++P+ D +I IA G SLAL+D GKVFSWG G H
Sbjct: 282 YAWGNGSGGRLGLGNSEVVSIPKIIPHFEDEKITSIACGQEFSLALSDSGKVFSWGKGLH 341
Query: 121 GQLGHSFTQ--NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
G LG+ + +Q P VI L + I+CG S +++ G +Y +G+ D +LG
Sbjct: 342 GNLGYDVSTMLSQSTPKVIPMLPP--ASQISCGNWHSMVLSKSGDVYTFGSNIDCRLGHS 399
Query: 179 G 179
G
Sbjct: 400 G 400
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 72/130 (55%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
G F ++LT+ G +++WG S +LG + P ++ + +I QIA G HSLAL
Sbjct: 216 GQNFAVMLTDTGGVYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACGKDHSLAL 275
Query: 107 TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
+ G V++WG G G+LG ++ +P +I DE +T IACG S A+++ GK++
Sbjct: 276 DEIGVVYAWGNGSGGRLGLGNSEVVSIPKIIPHFEDEKITSIACGQEFSLALSDSGKVFS 335
Query: 167 WGNAKDSQLG 176
WG LG
Sbjct: 336 WGKGLHGNLG 345
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 49/88 (55%)
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTS 155
I G ++ LTD G V+SWG +G+LGH + +P +I A ++ +T IACG S
Sbjct: 213 IKFGQNFAVMLTDTGGVYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACGKDHS 272
Query: 156 AAVTEKGKLYMWGNAKDSQLGVPGLPVV 183
A+ E G +Y WGN +LG+ VV
Sbjct: 273 LALDEIGVVYAWGNGSGGRLGLGNSEVV 300
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++YT+G + + RLG +G S P+ V+ + + + G F VL+E +
Sbjct: 384 DVYTFGSNI-DCRLG--------HSGNGSTPTMVQ-IGSKIKKIGAGANFNAVLSESNAI 433
Query: 61 WNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+ WG+N + +LG R +P+++ L+ I I G H + LTD G+VF++G
Sbjct: 434 YTWGSNIHCQLGVLLPDHRNYTGEPQVVKTLLPYPISTIEVGYEHVVVLTDTGEVFTFGD 493
Query: 118 GGHGQLG--------HSFTQNQKVPMVIEALADEFVTHIACGGSTS 155
Q G +FT+ K+P + V IA GG++S
Sbjct: 494 NSMMQCGVGEAIKEVCNFTR-VKIP------DNSTVFKIAAGGNSS 532
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 16/116 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+YTWG + +LG+ P+ P VK L P P++ + G +VLT+ G++
Sbjct: 433 IYTWGSNI-HCQLGV---LLPDHRNYTGEPQVVKTLLPYPISTIEVGYEHVVVLTDTGEV 488
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI------IQIANGGYHSLALTDDG 110
+ +G NS + G G+ + K + N V+I +IA GG SL G
Sbjct: 489 FTFGDNSMMQCGVGEAI-----KEVCNFTRVKIPDNSTVFKIAAGGNSSLISLSSG 539
>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
Length = 1344
Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 3/177 (1%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL++WG + G LG G E L I K + ++CG + +M LT + ++
Sbjct: 309 ELFSWGSGQ-YGALGFGTRDDIFEPRHLIIEKK--DYTYFIEGIACGKYHSMCLTRKKKI 365
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG LG GD PK + +L + I I+ G HS A+++ +++WG G +
Sbjct: 366 LTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAGESHSAAISEKLNLYTWGTGTY 425
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G+LGH ++K P +IE L + H++CG + A+T +G +Y +G K +LG+
Sbjct: 426 GRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITGQGTVYAFGQGKYGKLGI 482
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 23 NEAGGLSIPSKVKALPV---PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGG 79
NE +S P+ +K P P+ V+CG + +TE+ +L++WG+ LG G R
Sbjct: 271 NEIIVVSRPTAIK-FPKHTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDI 329
Query: 80 WKPKLLPNLVDVR-----IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP 134
++P+ L +++ + I IA G YHS+ LT K+ +WG G G+LGH + VP
Sbjct: 330 FEPRHL--IIEKKDYTYFIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVP 387
Query: 135 MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
I L+ + I+ G S SAA++EK LY WG +LG
Sbjct: 388 KEIYDLSKKKPIFISAGESHSAAISEKLNLYTWGTGTYGRLG 429
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 27/194 (13%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
++ TWG+ +G GRLG G P E LS K P+ ++A G + ++E+
Sbjct: 364 KILTWGQGQG-GRLGHGDEDDVLVPKEIYDLS-----KKKPIFISA---GESHSAAISEK 414
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
L+ WG + LG G KPKL+ +L II ++ G +H+LA+T G V+++G
Sbjct: 415 LNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITGQGTVYAFGQ 474
Query: 118 GGHGQLGHSFTQNQKV---PMVI----------EALADEFVTHI--ACGGSTSAAVTEKG 162
G +G+LG + Q + V P I E L + I A G + S + + G
Sbjct: 475 GKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLAKSG 534
Query: 163 KLYMWGNAKDSQLG 176
K+Y WG LG
Sbjct: 535 KIYSWGYNGKGLLG 548
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 21/183 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
EL+ WGR++ EG+LGLG + + P+ ++ + + ++CG ++ ++ G+
Sbjct: 688 ELFGWGRND-EGQLGLG-----FVSDFTAEPTLIRQIAHKNIQMIACGDNYSAAVSAFGE 741
Query: 60 LWNWGANSNYELGRGDRVGG---WKPKLLPNLVDVRIIQIANGGYHSLALTD-------- 108
L+ G N +LG G + L+ NL ++ +A G H LA+ D
Sbjct: 742 LFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAPIK--SVACGPNHMLAIADYNPDHPIK 799
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
DG +SWG GQLG ++ VP I + F +ACG S +T ++Y+WG
Sbjct: 800 DGMCYSWGRNWKGQLGIGSKEDSNVPKKIHNAKERF-KKVACGQDFSIGLTYGNQVYLWG 858
Query: 169 NAK 171
N K
Sbjct: 859 NNK 861
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 48/223 (21%)
Query: 1 ELYTWGRDEGEGRLG----------LGPGRGPNEAGGLSIPS-----------KVKALPV 39
++Y+WG + G+G LG + G+ P E G IP+ + +
Sbjct: 535 KIYSWGYN-GKGLLGRQKGFEEHLPIEIGQIPGELIG-KIPNIDELIQRGDLKQEETFSY 592
Query: 40 PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKL--------------- 84
V V+CG T+ LT G+++ +G+N+ +L + ++
Sbjct: 593 EVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDNSQALD 652
Query: 85 ---------LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN-QKVP 134
P VRI IA GG H A++ ++F WG GQLG F + P
Sbjct: 653 SSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEP 712
Query: 135 MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+I +A + + IACG + SAAV+ G+L++ GN ++ +LG+
Sbjct: 713 TLIRQIAHKNIQMIACGDNYSAAVSAFGELFVTGNLENGKLGL 755
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 48/216 (22%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
LYTWG GRLG G + P ++ L + VSCG F T+ +T +G +
Sbjct: 417 LYTWGTGT-YGRLGHGMDTSEKK------PKLIEDLDQYEIIHVSCGAFHTLAITGQGTV 469
Query: 61 WNWGANSNYELG-----------RGDRVGGWKPKLLPNLVDVR----IIQIANGGYHSLA 105
+ +G +LG R +++ +K + P + V+ I A G HSL
Sbjct: 470 YAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSLC 529
Query: 106 LTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF--------------------- 144
L GK++SWGY G G LG + +P+ I + E
Sbjct: 530 LAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQEET 589
Query: 145 ----VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V +ACG + ++T G++Y++G+ QL
Sbjct: 590 FSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLA 625
Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 34/191 (17%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWN 62
Y+WGR+ +G+LG+G N +P K+ V+CG F++ LT Q++
Sbjct: 804 YSWGRN-WKGQLGIGSKEDSN------VPKKIHNAKERFKKVACGQDFSIGLTYGNQVYL 856
Query: 63 WGANSNY---ELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
WG N + ++ + + P+LL L +I IA L D G++ WG
Sbjct: 857 WGNNKYFCDSKITKDVDI----PQLLQALEQAQIKDIACSYKFCSVLNDKGEILIWG--- 909
Query: 120 HGQLGHSFTQNQK-------------VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
L QNQK PM D + I+ G + SAAV+ K LY
Sbjct: 910 -SYLTDRIKQNQKKDKKSQNHLAITKFPM---RKFDFLMETISAGQNHSAAVSVKRSLYT 965
Query: 167 WGNAKDSQLGV 177
WG+A+ +LG+
Sbjct: 966 WGHAEGGRLGL 976
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG---DRVGGWKPKLLPNLVDVRIIQ 95
V + ++CGG ++ +L+ WG N +LG G D +P L+ + I
Sbjct: 668 VRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTA--EPTLIRQIAHKNIQM 725
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM---VIEALADEFVTHIACGG 152
IA G +S A++ G++F G +G+LG + + +I+ LA + +ACG
Sbjct: 726 IACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAP--IKSVACGP 783
Query: 153 STSAAVTE--------KGKLYMWGNAKDSQLGV 177
+ A+ + G Y WG QLG+
Sbjct: 784 NHMLAIADYNPDHPIKDGMCYSWGRNWKGQLGI 816
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG E +G+LG G L P V+AL + ++CG + ++ +G+
Sbjct: 3152 KVFSWGEGE-DGKLGHG------NRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGE 3204
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD KPKL+ L R+IQ+A G +LALT+DG VFSWG
Sbjct: 3205 LYTWGLGEYGRLGHGDNATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3264
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LG ++ P IE L+ V I CG S A+T G+++ WG +LG
Sbjct: 3265 GDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG 3323
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG RG +E G + P +++ L + V + CG F++ LT G++
Sbjct: 3259 VFSWG-DGDFGKLG----RGGSE--GSATPHEIERLSGIGVIQIECGAQFSLALTRAGEV 3311
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP+ + L R+I +A G H LA+TD G+V++WG H
Sbjct: 3312 WTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDH 3371
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P ++ L FV +ACG S S A
Sbjct: 3372 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3408
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + A L P V AL V V+CG T+ LTE+
Sbjct: 3204 ELYTWGLGE-YGRLGHG-----DNATQLK-PKLVTALHGRRVIQVACGSRDAQTLALTED 3256
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L + +IQI G SLALT G+V++WG
Sbjct: 3257 GAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGK 3316
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I L V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3317 GDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3375
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 11/170 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG + +P ++ L V AV GG + LT +G++++WG +
Sbjct: 3108 GRLGLGVTHN------VPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED 3161
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R KP+L+ L +I IA G HS A++ G++++WG G +G+LGH
Sbjct: 3162 GKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3221
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P ++ AL V +ACG + + A+TE G ++ WG+ +LG
Sbjct: 3222 ATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3271
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 87/153 (56%), Gaps = 5/153 (3%)
Query: 29 SIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+IP+ + +L V AV+ GG + LT +G+++ WG + +LG G+R+ +PKLL
Sbjct: 4273 AIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLL 4332
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFV 145
+L + + IA G HS A+T G V +WG G +G+LGH +++Q P ++EAL
Sbjct: 4333 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRA 4392
Query: 146 THIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
IACG + + +T+ ++ WG+ +LG
Sbjct: 4393 IDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4425
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDD 109
V++++G+++ G +N LG G P LP L V+ + + +GG H+LALT D
Sbjct: 3091 FVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLD 3150
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
GKVFSWG G G+LGH P ++EAL + + IACG S SAA++ +G+LY WG
Sbjct: 3151 GKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGL 3210
Query: 170 AKDSQLG 176
+ +LG
Sbjct: 3211 GEYGRLG 3217
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 11/170 (6%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWN 62
Y+WG + RLG G + +P+K+++L V +V CG ++ +T G L+
Sbjct: 639 YSWGVGDSR-RLGHG------DCHARELPTKIESLVRRVQSVYCGCSYSAAITLRGNLYT 691
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGGH 120
WG + LG G+ P ++ L D +++ +A +G H+L LT G V++WG G +
Sbjct: 692 WGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDY 751
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
G+LG+ + P++IE L V + G S A+T +G+LY WG A
Sbjct: 752 GKLGNGSCNSSLQPLLIECLPR--VQRVFAGSQFSLALTCEGQLYSWGKA 799
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT+ G +
Sbjct: 4413 VWSWG-DGDYGKLGRG------GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAV 4465
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L +II IA G H +A +D G+V++WG
Sbjct: 4466 YTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDE 4525
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++ AL + + + CG + + A++
Sbjct: 4526 GQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4564
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+ TWG+ GR G LG G ++ P V+AL ++CG T+ +T+
Sbjct: 4358 HVLTWGK----GRYGRLGHGDSEDQLR----PKLVEALLGYRAIDIACGSGDAQTLCITD 4409
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + +I++ G S+ALT G V++WG
Sbjct: 4410 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWG 4469
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LGH + + P + AL + + IA G A ++ G++Y WG+ + QLG
Sbjct: 4470 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG 4529
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 16/180 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEG 58
LYTWGR GRLG G + +P+ V AL V A+ G T+ LT G
Sbjct: 689 LYTWGRGT-YGRLGHG------NSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGG 741
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG +LG G +P L+ L R+ ++ G SLALT +G+++SWG
Sbjct: 742 LVYAWGDGDYGKLGNGSCNSSLQPLLIECLP--RVQRVFAGSQFSLALTCEGQLYSWGKA 799
Query: 119 ---GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GH QL Q VP +I +L + + H+A G + A++ G+++ WG + Q+
Sbjct: 800 SCLGH-QLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDNQQI 858
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 27/143 (18%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN----- 98
V+C ++L +EG+L+NW KP+ P L+D +IAN
Sbjct: 576 VACSEDMVVLLCQEGKLYNWPIA--------------KPETEPQLLD--FAEIANETFVS 619
Query: 99 -----GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
G H LA+ + +SWG G +LGH +++P IE+L V + CG S
Sbjct: 620 IAAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVRR-VQSVYCGCS 678
Query: 154 TSAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G LY WG +LG
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLG 701
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
A C G + + ++WG + LG GD P + +LV R+ + G +
Sbjct: 621 AAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVR-RVQSVYCGCSY 679
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S A+T G +++WG G +G+LGH + +Q +P ++ AL D V +A G + + +T
Sbjct: 680 SAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTR 739
Query: 161 KGKLYMWGNAKDSQLG 176
G +Y WG+ +LG
Sbjct: 740 GGLVYAWGDGDYGKLG 755
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 63 WGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N +LG +G +V P + +R I IA G ++ DGKV++ G G +
Sbjct: 3050 WGLNDKEQLGGLKGSKVK--VPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGTN 3107
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T N +P + L V +A GG + A+T GK++ WG +D +LG
Sbjct: 3108 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 3165
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 60 LWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG N +LG G R+ P L +R IQ+A G A+T DGK+F+ GY
Sbjct: 4201 IYGWGHNHRGQLGGLEGSRIK--TPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATGY 4258
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG + + +P ++ +L FV +A GG A+T G++Y WG +D +L
Sbjct: 4259 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKL 4318
Query: 176 G 176
G
Sbjct: 4319 G 4319
>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Oreochromis niloticus]
Length = 536
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y WG + G++G G N+ + S ++ V ++CG +M + + G++
Sbjct: 157 EVYAWGYNNS-GQVG--SGSTANQPTPRRVSSCLQ--NKVVVNIACGQLCSMAVLDNGEI 211
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG N N +LG G+ P + L V I+Q+A G H+LALTD+G V++WG +
Sbjct: 212 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSY 271
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG NQ +P I + V AC S TSAA T+ G++ MWG + + P
Sbjct: 272 GQLGTGNKSNQALPTPINTDKERIVEVAACHTSHTSAAKTQSGQVLMWGQCRGQAVASPH 331
Query: 180 L 180
L
Sbjct: 332 L 332
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEG 58
E++ G + G LGLG + E P ++ L + ++S G G ++ T +G
Sbjct: 51 EVFALGTN-CSGCLGLGDLQSTIE------PRRIDVLCGKKIVSLSYGTGPHVVIATADG 103
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+++ WG N +LG G G P L+ NL+ R+ ++A G +H++ALT DG+V++WGY
Sbjct: 104 EVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGY 163
Query: 118 GGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G T NQ P V L ++ V +IACG S AV + G++Y WG + QLG
Sbjct: 164 NNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLG 223
Query: 177 V 177
+
Sbjct: 224 L 224
>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
Length = 531
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V +++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD+ +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ +Q C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVC 122
>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Anolis carolinensis]
Length = 788
Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 59/181 (32%), Positives = 104/181 (57%), Gaps = 15/181 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L WG D EG++GLG + +S+P +V + PV+ +SCG + + ++T++G+L
Sbjct: 160 QLVMWG-DNSEGQIGLG------DKAYVSVPHQVD-IGKPVSCISCGYYHSALITQDGEL 211
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDV---RIIQIANGGYHSLALTDDGKVFSWGY 117
+ +G N +LG + K LP LV ++ ++A GG H++ L + G V+++G
Sbjct: 212 YTFGEPENGKLGLSPK--QLKNHKLPQLVSGISGKVSKVACGGGHTVVLAE-GDVYTFGL 268
Query: 118 GGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +GQLGH +F P ++ L + HIACG + +A +TE G +Y +G+ + +LG
Sbjct: 269 GQYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITENGLMYTFGDGRHGKLG 328
Query: 177 V 177
+
Sbjct: 329 L 329
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 55/170 (32%), Positives = 94/170 (55%), Gaps = 14/170 (8%)
Query: 11 EGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
EG+LGLG + +S +K + ++ G + + VLTE+GQL WG NS +
Sbjct: 116 EGQLGLGDTEERSTFHLISFFTKQHK----IKQLAAGSYTSAVLTEDGQLVMWGDNSEGQ 171
Query: 71 LGRGDRVGGWKPKLLPNLVDV--RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+G GD+ +P+ VD+ + I+ G YHS +T DG+++++G +G+LG S
Sbjct: 172 IGLGDKA----YVSVPHQVDIGKPVSCISCGYYHSALITQDGELYTFGEPENGKLGLSPK 227
Query: 129 Q--NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
Q N K+P ++ ++ + V+ +ACGG + + E G +Y +G + QLG
Sbjct: 228 QLKNHKLPQLVSGISGK-VSKVACGGGHTVVLAE-GDVYTFGLGQYGQLG 275
Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
+SCG T V+TE G+L+ +G+N+ +LG G + KP + L ++ A G H+
Sbjct: 40 ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHT 99
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKG 162
L T+ G V++ G GQLG T+ + +I + + +A G TSA +TE G
Sbjct: 100 LICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDG 159
Query: 163 KLYMWGNAKDSQLGV 177
+L MWG+ + Q+G+
Sbjct: 160 QLVMWGDNSEGQIGL 174
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/156 (35%), Positives = 84/156 (53%), Gaps = 11/156 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYT+G E G+LGL P + N +P V + V+ V+CGG T+VL E G +
Sbjct: 210 ELYTFGEPE-NGKLGLSPKQLKNH----KLPQLVSGISGKVSKVACGGGHTVVLAE-GDV 263
Query: 61 WNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G +LG G V +PK + +L +I IA G H+ +T++G ++++G G
Sbjct: 264 YTFGLGQYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITENGLMYTFGDGR 323
Query: 120 HGQLG---HSFTQNQKVPMVIEALADEFVTHIACGG 152
HG+LG ++T NQ VP + V +ACGG
Sbjct: 324 HGKLGLGEENYT-NQFVPTLCSNFLRFIVHSVACGG 358
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 98/180 (54%), Gaps = 15/180 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSI---PSKVKALPVPVAAVSCGGFFTMVLTEE 57
+++WG + +G+LGLG +G S P K+ A+ VAA++CGG ++ + +
Sbjct: 1053 SVWSWGYNS-DGQLGLG------SSGTYSTKNRPQKINAIS-NVAAIACGGSHSLAVARD 1104
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G LW+WG N +LG GD P+ + + +V IA G Y+SLALT DG V+SWG
Sbjct: 1105 GSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNV--AAIAAGEYYSLALTRDGSVWSWGD 1162
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +++ P +E L++ V IA G S A+T G ++ WG QLG+
Sbjct: 1163 NSDGQLGLGDNEDRNTPQKVEVLSN--VAAIAAGEDHSLALTRDGSVWSWGRNSRGQLGL 1220
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 15/191 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D +G+LGLG N P KV+ L VAA++ G ++ LT +G +
Sbjct: 1156 SVWSWG-DNSDGQLGLGDNEDRN------TPQKVEVLS-NVAAIAAGEDHSLALTRDGSV 1207
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG NS +LG D P+ + + +++ IA G HS A++++G ++WGY
Sbjct: 1208 WSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKA--IAAGNSHSFAISEEGLAWAWGYNYD 1265
Query: 121 GQLGHSFT---QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + N+ P ++ +++ V ++ G S A+TE G L+ WG+ D Q+G
Sbjct: 1266 GQLGIGTSGSLANENTPQKVKVISN--VVGLSGGNYHSLALTEDGALWAWGDNDDGQIGS 1323
Query: 178 PGLPVVQPCPV 188
G P V
Sbjct: 1324 TGGDRKNPVQV 1334
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 11/179 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
L++WG + G ++ + P+KV ALP P A ++ G + L +G +
Sbjct: 1001 SLWSWGDNGTGQLG-----LGLGQSVNVFTPTKVDALP-PAAKIAAGDNHALALAPDGSV 1054
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDV--RIIQIANGGYHSLALTDDGKVFSWGYG 118
W+WG NS+ +LG G G + K P ++ + IA GG HSLA+ DG ++SWGY
Sbjct: 1055 WSWGYNSDGQLGLG-SSGTYSTKNRPQKINAISNVAAIACGGSHSLAVARDGSLWSWGYN 1113
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG ++ P + A+++ V IA G S A+T G ++ WG+ D QLG+
Sbjct: 1114 YYGQLGLGDNYSKTTPQKVNAISN--VAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGL 1170
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 90/178 (50%), Gaps = 13/178 (7%)
Query: 21 GPNEAG--GLSIPSKVKALPVPVA------AVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
G NE+ G I + A P P+A A++ G M L E+G +W WGAN + +LG
Sbjct: 241 GNNESAQLGTGIAGEAVATPAPIAVLSNITAIAAGRRHAMALAEDGSVWAWGANGSGQLG 300
Query: 73 RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
GD P + +L DV IA+G +HSLALT DG +++WG G G+LG T +Q
Sbjct: 301 FGDFETPKAPGRVSSLADV--TAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQS 358
Query: 133 VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL-PVVQPCPVE 189
+P + ++++ A G S A+ G ++ WG QLGV L P PV
Sbjct: 359 LPAQVSSISN--AVSFAGGQRHSLAIAADGSVWSWGGNAYGQLGVESLTPASVLTPVH 414
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 15/178 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
L++WG D G+LGLG N P KV A+ V A++ G ++ LT +G +
Sbjct: 667 SLWSWG-DNTYGQLGLGDNDHRN------TPRKVNAIS-NVVAIAAGYRHSLALTRDGSV 718
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG N+ +LG GD P+ + + +++ I + N +S+A++++G V++WGY
Sbjct: 719 WSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAIAVGNN--YSIAISEEGLVWAWGYNCS 776
Query: 121 GQLG---HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQLG H ++ P + +++ V ++ G S S A+TE G L+ WGN + Q+
Sbjct: 777 GQLGIGTHGSLADENTPQKVIVISN--VVGLSAGSSHSIALTEDGALWAWGNNEAGQI 832
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 12/177 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++WG + G+LGLG + P KV AL V A++ G ++ LT +G L
Sbjct: 617 SFWSWGYNY-YGQLGLGDNVSK------TTPRKVNALS-NVVAMAAGDRHSLALTLDGSL 668
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W+WG N+ +LG GD P+ + + +V + IA G HSLALT DG V+SWG
Sbjct: 669 WSWGDNTYGQLGLGDNDHRNTPRKVNAISNV--VAIAAGYRHSLALTRDGSVWSWGNNTR 726
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ P + +++ + IA G + S A++E+G ++ WG QLG+
Sbjct: 727 GQLGLGDNDDRNTPQPVTTISN--IKAIAVGNNYSIAISEEGLVWAWGYNCSGQLGI 781
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 98/190 (51%), Gaps = 17/190 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WGR++ +LGLG ++ L+ P + + + +V+ G F++ L +G LW
Sbjct: 88 VWVWGRND-YNQLGLG-----DDINRLA-PEQAPVVS-NIVSVAAGRLFSLALASDGSLW 139
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N +LG GD P P L DV IA G YH+LA T G+V++ G HG
Sbjct: 140 AWGGNYYGQLGMGDNDNRLTPSKTPGLSDV--AAIAGGDYHALAATQSGEVWAMGRNDHG 197
Query: 122 QLGHSFT-QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL--GVP 178
QLG FT + P+ + L++ V +A G S A+ G ++ WGN + +QL G+
Sbjct: 198 QLG--FTGDHADAPVQVAGLSN--VKSVAAGEFFSLALKNDGTVWAWGNNESAQLGTGIA 253
Query: 179 GLPVVQPCPV 188
G V P P+
Sbjct: 254 GEAVATPAPI 263
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P+ V ALP+ A+++ GG + L +G +W+WG NS G + + P +
Sbjct: 536 TPTNVDALPL-AASIAAGGGHALALASDGSVWSWGRNS-VGQLGLGTGGTYSTENRPQKI 593
Query: 90 DV--RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
+ + IA GG HSLAL DG +SWGY +GQLG ++ P + AL++ V
Sbjct: 594 NAISNVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALSN--VVA 651
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A G S A+T G L+ WG+ QLG+
Sbjct: 652 MAAGDRHSLALTLDGSLWSWGDNTYGQLGL 681
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 40 PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR--IIQIA 97
P V+ GG F++ L +G LW+WG N +LG G P VD +IA
Sbjct: 982 PNPMVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQS--VNVFTPTKVDALPPAAKIA 1039
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFT---QNQKVPMVIEALADEFVTHIACGGST 154
G H+LAL DG V+SWGY GQLG + + P I A+++ V IACGGS
Sbjct: 1040 AGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISN--VAAIACGGSH 1097
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
S AV G L+ WG QLG+
Sbjct: 1098 SLAVARDGSLWSWGYNYYGQLGL 1120
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
++ L +G +W WG N +LG GD + P+ P V I+ +A G SLAL DG
Sbjct: 79 SLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAP--VVSNIVSVAAGRLFSLALASDG 136
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+++WG +GQLG N+ P L+D V IA G + A T+ G+++ G
Sbjct: 137 SLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSD--VAAIAGGDYHALAATQSGEVWAMGRN 194
Query: 171 KDSQLGVPGLPVVQPCPV 188
QLG G P V
Sbjct: 195 DHGQLGFTGDHADAPVQV 212
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++ WG + G G+LG G P P +V +L V A++ G F ++ LT +G L
Sbjct: 287 SVWAWGAN-GSGQLGFGDFETP------KAPGRVSSL-ADVTAIASGWFHSLALTSDGVL 338
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG N + LG P + ++ + + A G HSLA+ DG V+SWG +
Sbjct: 339 WAWGNNGDGRLGTDATSDQSLPAQVSSISNA--VSFAGGQRHSLAIAADGSVWSWGGNAY 396
Query: 121 GQLG 124
GQLG
Sbjct: 397 GQLG 400
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 40 PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII--QIA 97
P V+ GG F++ L +G +W+WG N + +LG G P VD + IA
Sbjct: 493 PNPMVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGEN--DDVFTPTNVDALPLAASIA 550
Query: 98 NGGYHSLALTDDGKVFSWGYGG---HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
GG H+LAL DG V+SWG G + P I A+++ V IACGGS
Sbjct: 551 AGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISN--VAAIACGGSH 608
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
S A+ G + WG QLG+
Sbjct: 609 SLALARDGSFWSWGYNYYGQLGL 631
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
HSLAL DG V+ WG + QLG N+ P +++ + +A G S A+
Sbjct: 78 HSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVSN--IVSVAAGRLFSLALASD 135
Query: 162 GKLYMWGNAKDSQLGV 177
G L+ WG QLG+
Sbjct: 136 GSLWAWGGNYYGQLGM 151
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG E +G+LG G L P V+ L + V+CG + ++ +G+
Sbjct: 1939 KVFSWGEGE-DGKLGHG------NRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGE 1991
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD KPKL+ L R+IQ+A G +LALT+DG VFSWG
Sbjct: 1992 LYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGD 2051
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LG ++ P IE L+ V I CG S A+T G+++ WG +LG
Sbjct: 2052 GDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG 2110
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG + +P ++ L V AV GG + LT +G++++WG +
Sbjct: 1895 GRLGLGVTHN------VPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED 1948
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R KP+L+ L +I +A G HS A++ G++++WG G +G+LGH
Sbjct: 1949 GKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 2008
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P ++ ALA V +ACG + + A+TE G ++ WG+ +LG
Sbjct: 2009 ATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLG 2058
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + A L P V AL V V+CG T+ LTE+
Sbjct: 1991 ELYTWGLGE-YGRLGHG-----DNATQLK-PKLVAALAGRRVIQVACGSRDAQTLALTED 2043
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L + +IQI G SLALT G+V++WG
Sbjct: 2044 GSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGK 2103
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I L V H+A G AVT+ G++Y WG+ Q G
Sbjct: 2104 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2162
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G + P +++ L + V + CG F++ LT G++
Sbjct: 2046 VFSWG-DGDFGKLGRGGSEGSD------TPHEIERLSGIGVIQIECGAQFSLALTRAGEV 2098
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP+ + L R+I +A G H LA+TD G+V++WG H
Sbjct: 2099 WTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDH 2158
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P ++ L FV +ACG S S A
Sbjct: 2159 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 2195
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V AV+ GG + LT EG+++ WG + +LG G+R+ +PKL+ +L + + IA
Sbjct: 3064 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIAC 3123
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSA 156
G HS A+T G V +WG G +G+LGH +++Q P ++EAL IACG + +
Sbjct: 3124 GSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTL 3183
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
+T+ ++ WG+ +LG
Sbjct: 3184 CITDDDNVWSWGDGDYGKLG 3203
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT+ G +
Sbjct: 3191 VWSWG-DGDYGKLGRG------GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAV 3243
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ W + LG G +PK + L +II IA G H +A +D G+V++WG
Sbjct: 3244 YTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDE 3303
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++ AL + + + CG + + A++
Sbjct: 3304 GQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 3342
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+ TWG+ GR G LG G ++ P V+AL ++CG T+ +T+
Sbjct: 3136 HVLTWGK----GRYGRLGHGDSEDQLR----PQLVEALLGYRAIDIACGSGDAQTLCITD 3187
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + +I++ G S+ALT G V++W
Sbjct: 3188 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWS 3247
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LGH + + P + AL + + IA G A ++ G++Y WG+ + QLG
Sbjct: 3248 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 3307
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 63 WGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N +LG +G +V P + +R I IA G + +GKV++ G G +
Sbjct: 1837 WGLNDKEQLGGLKGSKVK--VPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGTN 1894
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T N +P + L V +A GG + A+T GK++ WG +D +LG
Sbjct: 1895 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 1952
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 60 LWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG N +LG G R+ P L +R +Q+A G A+T DGK+F+ GY
Sbjct: 2979 IYGWGHNHRGQLGGLEGSRIK--TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 3036
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG + +P ++ +L FV +A GG A+T +G++Y WG +D +L
Sbjct: 3037 GSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 3096
Query: 176 G 176
G
Sbjct: 3097 G 3097
>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 556
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWN 62
+ WG D +G+LG G G + + +P+ + AV+ GG ++ LT G +
Sbjct: 59 FAWG-DNSDGQLGNGTTTGSSTPVDVYLPAGTT-----ITAVTAGGLHSLALTSTGAVLA 112
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG N + +LG GD P + I IA G +HSLALT G V +WG HGQ
Sbjct: 113 WGRNFSGQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTSAGTVLAWGENLHGQ 172
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LG+ T N P+ + A +T +A G S AVT G + WG+ + QLG
Sbjct: 173 LGNGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVTSTGAVLAWGDNSNGQLG 226
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEEG 58
+ WGR+ G+LG G + S P V LP + A++ G F ++ LT G
Sbjct: 109 AVLAWGRNF-SGQLGNG------DTTNRSTPVDVD-LPAGTTITAIAAGAFHSLALTSAG 160
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG N + +LG G P + V I +A G +HSLA+T G V +WG
Sbjct: 161 TVLAWGENLHGQLGNGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVTSTGAVLAWGDN 220
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST---SAAVTEKGKLYMWGNAKDSQL 175
+GQLG+ T P+ ++ A +T +A G + S A+T G WGN D QL
Sbjct: 221 SNGQLGNGTTTGSSTPVDVDLPAGTTITAVAAGVAGAAHSLALTSTGAALAWGNNADGQL 280
Query: 176 G 176
G
Sbjct: 281 G 281
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 83/189 (43%), Gaps = 4/189 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+ WG D G+LG G G + + +P+ VAA G ++ LT G
Sbjct: 213 AVLAWG-DNSNGQLGNGTTTGSSTPVDVDLPAGTTI--TAVAAGVAGAAHSLALTSTGAA 269
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N++ +LG GD P + V I +A GG HSLALT G V +WG
Sbjct: 270 LAWGNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGRNVS 329
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLG+ T P+ ++ + IA G A+T G + WG QLG G
Sbjct: 330 GQLGNGTTTGSSTPVDVDLPTGATINAIAAGFDFGLALTTAGAVVAWGRNVSGQLG-NGD 388
Query: 181 PVVQPCPVE 189
+ + PV+
Sbjct: 389 TINRSTPVD 397
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 5 WGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEEGQLWN 62
WG + +G+LG G + S P V LP V + AV+ GG ++ LT G +
Sbjct: 272 WG-NNADGQLGNG------DTTNRSTPVDVD-LPAGVTITAVAAGGLHSLALTAAGAVVA 323
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG N + +LG G G P + I IA G LALT G V +WG GQ
Sbjct: 324 WGRNVSGQLGNGTTTGSSTPVDVDLPTGATINAIAAGFDFGLALTTAGAVVAWGRNVSGQ 383
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
LG+ T N+ P+ ++ A +T +A GG S A+
Sbjct: 384 LGNGDTINRSTPVDVDLPAGVTITAVAAGGQHSMAL 419
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
S A+ F+WG GQLG+ T P+ + A +T + GG S A+T G
Sbjct: 49 SAAIRASDTYFAWGDNSDGQLGNGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALTSTG 108
Query: 163 KLYMWGNAKDSQLG 176
+ WG QLG
Sbjct: 109 AVLAWGRNFSGQLG 122
>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
gorilla gorilla]
Length = 982
Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 62/177 (35%), Positives = 96/177 (54%), Gaps = 13/177 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG +P ++AL + V VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRRGAQRG-------ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L ++IIQ++ G YHSLAL+ D +VFSWG HGQ
Sbjct: 102 GSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
LG F +Q P + +L + +A GG+ S A++ G + WG+ QL + G
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSG 217
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 13/186 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G E +S P K+ L + + VSCG + ++ L+++ Q
Sbjct: 96 VFAWGAGS-EGQLGIG------EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQ 148
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSN 208
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G + P+ I AL + V +I+CG +A +T+ GK++ +G+ QL
Sbjct: 209 SAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQL 268
Query: 176 GVPGLP 181
G P
Sbjct: 269 GYSPTP 274
Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 58/175 (33%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKNS-HGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGTHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR KP + L ++ ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNA 170
GQLG+S T ++ P ++E + D V+ I CG T A V G++ +G+
Sbjct: 262 DNCSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVVSFGHG 315
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WGA+S EL R G +LL Q A+G HSL L + +V S G GQ
Sbjct: 5 WGADSR-ELQRRRTAGSPGAELL---------QAASGERHSLLLLTNHRVLSCGDNSRGQ 54
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
LG Q ++P I+AL V ++CG S AV KG+++ WG + QLG+
Sbjct: 55 LGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + P I L + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 539
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 94/153 (61%), Gaps = 6/153 (3%)
Query: 31 PSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
P K++AL V + G G + LTEEG++++WG N ELG G P L+P++
Sbjct: 70 PKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNKSTNEGLTPTLVPSV 129
Query: 89 VDVR-IIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEA-LADEF 144
+D + ++ IA GG+HSLALT+ G++++WG+ GQ+ G + Q +P ++ L +
Sbjct: 130 LDDKFVVDIACGGHHSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKK 189
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V HI+CG S+S AVT+ G++Y WG+ QLG+
Sbjct: 190 VVHISCGDSSSVAVTDSGEVYSWGHNGVGQLGL 222
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 78/140 (55%), Gaps = 3/140 (2%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDD 109
T+++T++ ++ G N+ LG GD PK + L + A G G H LALT++
Sbjct: 39 TLLVTKDDMVYGIGNNTYGCLGTGDTQSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEE 98
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVI-EALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GKV+SWGY + +LG+ T P ++ L D+FV IACGG S A+T KG++Y WG
Sbjct: 99 GKVYSWGYNDYCELGNKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTNKGEIYAWG 158
Query: 169 NAKDSQLGV-PGLPVVQPCP 187
+ Q+G L VQP P
Sbjct: 159 HNVSGQVGCGTILSTVQPIP 178
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV---------PVAAVSCGGFFT 51
E+Y WG + G++G G +I S V+ +P V +SCG +
Sbjct: 153 EIYAWGHNVS-GQVGCG-----------TILSTVQPIPKLLNVGLNGKKVVHISCGDSSS 200
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK 111
+ +T+ G++++WG N +LG G+ +P+ + + I ++ G H+LAL+D+G
Sbjct: 201 VAVTDSGEVYSWGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGV 260
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-----LADEFVTHIACGGSTSAAVTEKGKLYM 166
++ WG +GQLG + N +P +E + D +H S A++E +++M
Sbjct: 261 LYVWGANSYGQLGLNTDSNVWIPTKLEVPEMGRILDIVTSHY---HHISLAMSEGNRIFM 317
Query: 167 WGNAKDSQLGVPGL 180
WG + VP L
Sbjct: 318 WGQCLGQSIKVPTL 331
>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
latipes]
Length = 527
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 6/181 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++ WG + G++G G N+ + S +++ V V CG +M + + G++
Sbjct: 148 EVFAWGYNNS-GQVG--SGSTANQPTPRRVSSCLQS--KVVVNVGCGQLCSMAVLDNGEI 202
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG N N +LG G+ P + L V ++Q+A G H+LALTD+G V++WG +
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSY 262
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG NQ +P +I + V AC S TSAA T+ G++ MWG + + P
Sbjct: 263 GQLGTGNKSNQALPTLINTDKERMVEVAACHTSHTSAAKTQSGQVLMWGQCRGQAVSSPH 322
Query: 180 L 180
L
Sbjct: 323 L 323
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEG 58
E++ G + G LGLG + E P ++ L + ++S G G ++ T +G
Sbjct: 42 EVFALGTN-CSGCLGLGDLQSTIE------PRRIDVLCGKKIVSLSYGTGPHVVIATADG 94
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+++ WG N +LG G G P L+ NL+ R+ ++A G +H++ALT DG+VF+WGY
Sbjct: 95 EVFAWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGY 154
Query: 118 GGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G T NQ P V L + V ++ CG S AV + G++Y WG + QLG
Sbjct: 155 NNSGQVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLG 214
Query: 177 V 177
+
Sbjct: 215 L 215
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ +WGR++ G+LGLG +P K++A V V ++ G T +TE+G
Sbjct: 139 QVQSWGRNQ-NGQLGLGTTEDS------LLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGD 191
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + ++ +++ +A G H++ ++D G ++++G+
Sbjct: 192 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSK 251
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH ++ VP +EAL D ++ I+ G + A+T +GKLY WG K Q+GV
Sbjct: 252 YGQLGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGV 309
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTE-EGQ 59
L +WGR E +G+LG G +A +P+ + P + +V CG T +E E Q
Sbjct: 35 LCSWGRGE-DGQLGHG------DAEDRLVPTVLSGFDAPGITSVICGADHTTAYSEDELQ 87
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG LG G+ + P+ + L ++I QIA G H LA+T G+V SWG
Sbjct: 88 VYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQ 147
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG T++ +P I+A V IA G +AAVTE G LY WG + LG+
Sbjct: 148 NGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 205
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GRLG G + + P VKAL + + ++CG + +T GQ
Sbjct: 87 QVYSWGWGD-FGRLGHG------NSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGQ 139
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G P+ + V + IA G H+ A+T+DG ++ WG+G
Sbjct: 140 VQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGR 199
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ +P + ++ E + +ACG + V++ G LY +G +K QLG
Sbjct: 200 YGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLG 256
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + +P KV ++ + V+CG T+ +++ G
Sbjct: 191 DLYGWGWGR-YGNLGLG------DRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGN 243
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P L L D I QI+ G H++ALT +GK++ WG+
Sbjct: 244 LYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNK 303
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G + P+ + D+ ++ +ACG + A++EK ++ WG QLG
Sbjct: 304 FGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLG 360
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P V VS G ++ L L +WG + +LG GD P +L I +
Sbjct: 13 PQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVI 72
Query: 98 NGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
G H+ A ++D +V+SWG+G G+LGH + + P ++AL + IACG S
Sbjct: 73 CGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCL 132
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
AVT G++ WG ++ QLG+
Sbjct: 133 AVTMAGQVQSWGRNQNGQLGL 153
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
Query: 30 IPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P K++AL ++ +S G TM LT EG+L+ WG N ++G G+ P +
Sbjct: 265 VPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFP 324
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
D +I Q+A G H+LAL++ VFSWG G GQLG+ ++ P++I+AL+ +
Sbjct: 325 EDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSTD 379
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF 144
+P+ ++ ++ G HS+AL + SWG G GQLGH +++ VP V+
Sbjct: 8 VPDSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPG 67
Query: 145 VTHIACGGSTSAAVTEKG-KLYMWGNAKDSQLGV-PGLPVVQPCPVE 189
+T + CG + A +E ++Y WG +LG V P PV+
Sbjct: 68 ITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVK 114
>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
partial [Ciona intestinalis]
Length = 2540
Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 67/196 (34%), Positives = 100/196 (51%), Gaps = 20/196 (10%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG- 58
+L+TWG EG+ GRLGLG N +P VK + +V CG T+VL ++G
Sbjct: 443 QLFTWG--EGDYGRLGLGDNTSRN------VPVLVKDI-ASAGSVVCGSSHTLVLAQDGL 493
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++GA N +LG GD ++PK++ ++ + ++ G +SLAL D G+VFSWG G
Sbjct: 494 TVWSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCG 553
Query: 119 ---GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ- 174
G G +F + P +I+ L V I G A+T ++Y WGN Q
Sbjct: 554 ACLGCGSPDATFMK----PTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQC 609
Query: 175 -LGVPGLPVVQPCPVE 189
LG P+ P V+
Sbjct: 610 GLGHTNSPISVPTQVQ 625
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG + LG + + P KVK+ + G + T ++ +G +
Sbjct: 285 DVYAWGSNSSHQLAELGSDK-------IVFPKKVKSFG-NSQMLEAGQYCTFAVSGDGCV 336
Query: 61 WNWGANSNYELGRGD--RVGGWKPKLLPNLVDVRIIQIANGG-YHSLALTDDGKVFSWGY 117
+ G S LG GD K + +R I + G H+LALT +G +FSWG
Sbjct: 337 RSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGHTLALTTEGCIFSWGD 396
Query: 118 GGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +G+LGH + K P +IE LA V ++ G SA VT++G+L+ WG +LG
Sbjct: 397 GDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYGRLG 456
Query: 177 V 177
+
Sbjct: 457 L 457
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLGLG + + + + S G T+ LT EG +++WG +L
Sbjct: 345 GRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDG--HTLALTTEGCIFSWGDGDYGKL 402
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGY-HSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
G G + PK++ + RI+ + GY HS +T +G++F+WG G +G+LG +
Sbjct: 403 GHGSSLTHKSPKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYGRLGLGDNTS 462
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKG-KLYMWGNAKDSQLG 176
+ VP++++ +A + CG S + + + G ++ +G + +LG
Sbjct: 463 RNVPVLVKDIAS--AGSVVCGSSHTLVLAQDGLTVWSFGAGDNGKLG 507
>gi|76678806|ref|XP_586049.2| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Bos taurus]
Length = 425
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 3 VYAWGHN-GYSQLG----NGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 57
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 58 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 117
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 118 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 174
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
G ++ WG N +LG G G P ++ NL+ +++++A G +HS+AL DG+VF+WG
Sbjct: 1 GVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWG 60
Query: 117 YGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
Y GQ+G T NQ P V L + V IACG ++S AV + G++Y WG + QL
Sbjct: 61 YNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQL 120
Query: 176 GV 177
G+
Sbjct: 121 GL 122
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 55 EVFAWGYNNC-GQVGSG------STANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 107
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 108 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + + AC TSAA T+ G +YMWG + + +
Sbjct: 168 TYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTL 227
Query: 178 PGL 180
P L
Sbjct: 228 PHL 230
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 1 GVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWG 60
Query: 169 NAKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 61 YNNCGQVG-SGSTANQPTP 78
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 105/190 (55%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG + +P K++A + + V+ G T +TE+G
Sbjct: 131 EVQSWGRNQ-NGQLGLG------DTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGD 183
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + + + +A G H+++++ G ++++G+
Sbjct: 184 LYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSK 243
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH ++ +P +EAL++ F++ I+ G + A+T GKLY WG K Q+GV G
Sbjct: 244 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGV-G 302
Query: 180 LPVVQPCPVE 189
+ Q PV+
Sbjct: 303 NNLDQCSPVQ 312
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + GRLG G + L P +KAL + + ++CG + +T EG+
Sbjct: 79 EVYSWGWGD-FGRLGHG------NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXEGE 131
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG GD P+ + +RI +A G H+ A+T+DG ++ WG+G
Sbjct: 132 VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGR 191
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + + E + +ACG + +V+ G LY +G +K QLG
Sbjct: 192 YGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLG 248
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG-QLW 61
+WGR E +G+LG G +A P+++ AL + +V+CG T+ ++ G +++
Sbjct: 29 SWGRGE-DGQLGHG------DAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGXEVY 81
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P + L +RI QIA G H LA+T +G+V SWG +G
Sbjct: 82 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNG 141
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+A + +A G +AAVTE G LY WG + LG+
Sbjct: 142 QLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 197
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + +P +V + + V+CG T+ ++ G
Sbjct: 183 DLYGWGWGR-YGNLGLG------DRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGA 235
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P L L + I QI+ G H+ ALT DGK++ WG+
Sbjct: 236 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNK 295
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G +Q P+ + D+ V ++CG + AVTE+ ++ WG + QLG+
Sbjct: 296 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGI 353
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
V A P V +S G ++ L + +WG + +LG GD P L L +I
Sbjct: 1 VTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQI 60
Query: 94 IQIANGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+ + G H++A + G +V+SWG+G G+LGH + + P+ I+AL + IACG
Sbjct: 61 VSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 120
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
S AVT +G++ WG ++ QLG+
Sbjct: 121 SHCLAVTXEGEVQSWGRNQNGQLGL 145
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
IP K++AL ++ +S G T LT +G+L+ WG N ++G G+ + P +
Sbjct: 257 IPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 316
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
D +++Q++ G H+LA+T+ VF+WG G +GQLG + ++ P +IEAL+
Sbjct: 317 DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 369
>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
Length = 841
Score = 96.7 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 18/202 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
ELYTWG +G +GL G G IP ++ +PVA VSCG + T ++T G
Sbjct: 149 ELYTWG--DGTHNVGL---LGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTALITSMG 203
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
QL+ +G S LG G+ PK + +L ++ I +A G +H+ A+ +
Sbjct: 204 QLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSV 263
Query: 109 -DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
GK+F+WG G +LGH +++ P + +L D +ACG S + +T GK+
Sbjct: 264 SAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSM 323
Query: 168 GNAKDSQLGVPGLPVVQPCPVE 189
GN+ QLG P PC VE
Sbjct: 324 GNSVYGQLGNPNSDGRLPCLVE 345
Score = 89.0 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 61/177 (34%), Positives = 91/177 (51%), Gaps = 20/177 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+TWG D + RLG G ++ L + V+CG T+ LT G++
Sbjct: 267 KLFTWG-DGDKHRLGHG-----DKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKV 320
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI-----IQIANGGYHSLALTDDGKVFSW 115
+ G + +LG + G LP LV+ RI +Q+A G YH LT +VF+W
Sbjct: 321 LSMGNSVYGQLGNPNSDG-----RLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTW 375
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
G G +G+LGH +++KVP +EAL D V HIACG + +AA+ L+ W + D
Sbjct: 376 GKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAIC----LHKWVSGAD 428
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G +S P +V++L + AV+CG + T + E
Sbjct: 204 QLFTFG-DGSFGVLGHG------NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIV 256
Query: 57 --------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+L+ WG + LG GD+ KP + +L+D ++A G ++ LT
Sbjct: 257 THSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTT 316
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GKV S G +GQLG+ + + +V + +A E V +ACG A +T + +++ WG
Sbjct: 317 SGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWG 376
Query: 169 NAKDSQLG 176
+ +LG
Sbjct: 377 KGANGRLG 384
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 7/195 (3%)
Query: 1 ELYTWGRD--EGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEE 57
++Y WG E R+G E +P +++ L + V V CG ++T
Sbjct: 36 DVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRN 95
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG +S LG G R P+L+ +L + +A G +H+ A+T G++++WG
Sbjct: 96 GDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGD 155
Query: 118 GGH--GQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G H G LGH +P I D V +++CG +A +T G+L+ +G+
Sbjct: 156 GTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGV 215
Query: 175 LGVPGLPVVQPCPVE 189
LG L + CP E
Sbjct: 216 LGHGNLTSIS-CPKE 229
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 17/193 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG +G+LG+G + E ++ P KV+ ++CG M +T++ +
Sbjct: 194 EIYSWGAG-ADGQLGVG--KHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCR 250
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVD-VRIIQIANGGYHSLALTDDGKVFSWGYG 118
L++WG ++ LG GD + P ++ ++ +RI +A GG+H+ L+D+G++F+ G G
Sbjct: 251 LFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRG 310
Query: 119 GHGQLGHSFTQNQ------------KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
+GQLGH Q + + I L D+ + ACG + + ++ G+++
Sbjct: 311 SYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFA 370
Query: 167 WGNAKDSQLGVPG 179
WG A+D QLG G
Sbjct: 371 WGAAEDGQLGTGG 383
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 12/182 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WG EG+LG G A ++P+ VKAL V V+CG + T V+T+ G
Sbjct: 90 EVVSWGWG-NEGQLGSG------NAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGL 142
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG ++ +LG+GD P+ + L + +I QIA G H+LAL+ +G+++SWG G
Sbjct: 143 VMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSWGAGA 202
Query: 120 HGQLG----HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQLG T + P + +E IACG A+T+ +L+ WG D +L
Sbjct: 203 DGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRL 262
Query: 176 GV 177
G+
Sbjct: 263 GL 264
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 76/134 (56%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
V+CGG T+ +TE+G++ +WG + +LG G+ P ++ L + R+ +A G YH+
Sbjct: 75 VACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHT 134
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
+TD G V WG G GQLG + +P + L +E + IACG + + A++ G+
Sbjct: 135 AVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGE 194
Query: 164 LYMWGNAKDSQLGV 177
+Y WG D QLGV
Sbjct: 195 IYSWGAGADGQLGV 208
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 19/123 (15%)
Query: 71 LGRGDRVGGWKPKLLPNLVDVRI-----------------IQIANGGYHSLALTDDGKVF 113
LG GD + +PK L D R I +A GG+H++A+T+DG+V
Sbjct: 35 LGHGDTLSQLEPKRLR--FDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVTEDGEVV 92
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
SWG+G GQLG +Q VP V++AL++ V +ACG +A VT+ G + WG
Sbjct: 93 SWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNSG 152
Query: 174 QLG 176
QLG
Sbjct: 153 QLG 155
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L++WG +GRLGLG +E+ + + + V+ GG T VL++ G+++
Sbjct: 251 LFSWGLG-ADGRLGLGD----SESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIF 305
Query: 62 NWGANSNYELGRGD---RVGGWKPKLLPN---------LVDVRIIQIANGGYHSLALTDD 109
G S +LG GD ++ K + L + L D +II+ A G H+L ++
Sbjct: 306 TCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTA 365
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G+VF+WG GQLG T+ P+ + +L V ++CG SAAV
Sbjct: 366 GEVFAWGAAEDGQLGTGGTEGANSPVELTSLRG-LVGDVSCGLVHSAAV 413
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 16/97 (16%)
Query: 96 IANGGYHSLALTDDGKVFSW-GYGGHGQLGHSFTQNQKVP------------MVIEALAD 142
+A G L D GK S G+G G+LGH T +Q P + ALA
Sbjct: 7 MAEGERLRRELEDGGKRTSLQGWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAH 66
Query: 143 EFVT---HIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
E + ++ACGG + AVTE G++ WG + QLG
Sbjct: 67 ESLNGAIYVACGGHHTVAVTEDGEVVSWGWGNEGQLG 103
>gi|348686412|gb|EGZ26227.1| hypothetical protein PHYSODRAFT_486876 [Phytophthora sojae]
Length = 289
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 86/158 (54%), Gaps = 4/158 (2%)
Query: 28 LSIPSKVK-ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV-GGWKPKLL 85
+ +P+ V+ PV + V+ GG ++ L G +W WG N +LG V P+ +
Sbjct: 119 VRVPTVVEFPTPVQIVQVAAGGMHSLALDSSGGVWAWGCNEFGQLGINSEVETQHSPRRV 178
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL--ADE 143
++R+ IA G HS ++ G+VF++G+G + QLGH TQN+ P+V++AL D
Sbjct: 179 ALSAEIRVRDIAAGWAHSALVSTSGEVFTFGWGLYNQLGHGSTQNEVEPVVVDALQGVDS 238
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLP 181
+ACG +AA+T G LY WG KD QL P P
Sbjct: 239 EAVQVACGNWHTAALTASGDLYTWGWGKDGQLVRPWRP 276
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 5/147 (3%)
Query: 43 AVSCGGFFTM-VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY 101
AV G FT+ V+ + G++ WG EL VG ++ V R +A G
Sbjct: 32 AVDGGDTFTVGVVADSGEVVGWGRAFYGELPADSAVG---KGVVTLQVSERCSAVACGSN 88
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTE 160
H LALTD G+V +WG+ Q S ++ +VP V+E + +A GG S A+
Sbjct: 89 HVLALTDSGRVVAWGWNASAQAAVSAGEDVVRVPTVVEFPTPVQIVQVAAGGMHSLALDS 148
Query: 161 KGKLYMWGNAKDSQLGVPGLPVVQPCP 187
G ++ WG + QLG+ Q P
Sbjct: 149 SGGVWAWGCNEFGQLGINSEVETQHSP 175
>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
Length = 434
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 8/176 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GRLG G + + IP + AL VA+V+CG T+V T EGQ
Sbjct: 83 QVYSWGWGD-FGRLGTG------DVKDVFIPCPLPALAGRRVASVACGDTHTLVATAEGQ 135
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G N N + G G +P+L+ L ++ +A G HS+ +T +G+V+ WG+G
Sbjct: 136 LFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGR 195
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+G +G +Q++ +P + + L V + CG S AV E G +Y WG +QL
Sbjct: 196 YGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQL 251
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTE-EGQ 59
+ +WGR E +G+LG G E P V +L +V CG ++M + + Q
Sbjct: 31 VLSWGRGE-DGQLGHGDAEDRQE------PQAVFSLLHRGATSVHCGAEYSMAVAGGDKQ 83
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG LG GD + P LP L R+ +A G H+L T +G++F++G
Sbjct: 84 VYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFGRNQ 143
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+GQ G Q+ P ++ AL + V +ACG S VT +G++Y WG
Sbjct: 144 NGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWG 192
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 10/178 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+ +GR++ G+ GLG + E P V AL V AV+CG +M +T EG+
Sbjct: 135 QLFAFGRNQ-NGQCGLGSIQDCLE------PQLVTALQGKEVVAVACGAEHSMCVTSEGE 187
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG +G G+ P L L V++ Q+ G HS+A+ + G +++WG+G
Sbjct: 188 VYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGA 247
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ QL ++ VP +EA+ + V +A G + A +G+L+ G K Q GV
Sbjct: 248 YAQLMQGDRKDHYVPKRVEAV--QQVATVAGGWRHTMAADSQGRLFASGWNKFGQCGV 303
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 41 VAAVSCGGFFTMVLTEE---GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
V ++CG ++ L + +WG + +LG GD +P+ + +L+ +
Sbjct: 9 VIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVH 68
Query: 98 NGGYHSLALTD-DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
G +S+A+ D +V+SWG+G G+LG ++ +P + ALA V +ACG + +
Sbjct: 69 CGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTL 128
Query: 157 AVTEKGKLYMWGNAKDSQLGVPGLPVVQPC 186
T +G+L+ +G ++ Q GL +Q C
Sbjct: 129 VATAEGQLFAFGRNQNGQC---GLGSIQDC 155
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
+P +V+A+ VA V+ G TM +G+L+ G N + G G + + + L
Sbjct: 261 VPKRVEAVQ-QVATVAGGWRHTMAADSQGRLFASGWNKFGQCGVGHNEDVVRVQQVEALA 319
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
R++Q+ +G H++A+T GK FSWG +GQLGHS Q+ P+ + AL+
Sbjct: 320 GERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGMQDSNSPVELAALSR------- 372
Query: 150 CGGSTSAAVTEKGK-LYMWGNAKDSQLGV 177
GG + A+T + + + ++G A + V
Sbjct: 373 -GGINTDALTRQAQPVVLYGVAPSDRYAV 400
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++T+GR G G G+G + +S P+ V AL V V+CG T L + GQ
Sbjct: 59 EVFTFGR----GNFGQ-LGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQ 113
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG+ LG GD V PKL+ +L + +A GG+HS + + G + +WG G
Sbjct: 114 LYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGY 173
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH ++K P +++ + +ACG + +T+ +++ WG+ + +LG+
Sbjct: 174 FGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGI 231
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LYTWG E GRLG G +E S P V++L V V+ GGF + V+ E G
Sbjct: 113 QLYTWGSGE-YGRLGHG-----DEVRQAS-PKLVESLQGKEVTFVAAGGFHSSVIIEGGN 165
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L WG +LG GD PK++ + ++A G +H+L LT +V++WG G
Sbjct: 166 LLTWGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGE 225
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG + P++I AL V HI+ GG SAA+T +G LY WG QLG
Sbjct: 226 FGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLG 282
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG+ G+LG G + + P V A L V VSCG T +L E G+
Sbjct: 7 EVYSWGQGV-LGQLGHGDEKTQRQ------PRLVVAFLGFNVRQVSCGNQHTAILMENGE 59
Query: 60 LWNWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ +G + +LG+G V P L+ L + Q+A G +H+ AL D+G++++WG
Sbjct: 60 VFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGS 119
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +G+LGH Q P ++E+L + VT +A GG S+ + E G L WG QLG
Sbjct: 120 GEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLG 178
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Query: 31 PSKVKALPVPVA-AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P VK + +A V+CG T++LT+ ++W WG+ +LG GD +P ++ L
Sbjct: 188 PKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQ 247
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
V +I I+ GG+HS ALT +G +++WG G GQLGH +Q +P+V+E ++
Sbjct: 248 GVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQNIPVVVEVIS 299
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 54 LTEEG-QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
++ EG ++++WG +LG GD +P+L+ + + Q++ G H+ L ++G+V
Sbjct: 1 MSREGSEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEV 60
Query: 113 FSWGYGGHGQLGH--SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
F++G G GQLG S T N P ++ AL + V +ACG + A+ + G+LY WG+
Sbjct: 61 FTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSG 120
Query: 171 KDSQLGVPGLPVVQPCP 187
+ +LG G V Q P
Sbjct: 121 EYGRLG-HGDEVRQASP 136
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + GRLG G + + IP ++AL + V+CG T+ +T+ G+
Sbjct: 87 EVYSWGWGD-FGRLGHG------DCNDVFIPQPIRALAGRNIVKVACGDTHTLAVTDTGE 139
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+++G N N +LG G P+ + +L + IA GG HSLA T G VF+WG+G
Sbjct: 140 LFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGR 199
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG +++ +P + L VT +ACG S A E G +Y +G +K QLG
Sbjct: 200 YGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLG 256
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 5 WGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNW 63
WGR G LG+GP P + +PS+V L V V +V+CG ++ E G ++ +
Sbjct: 197 WGR---YGNLGVGP---PEDR---HLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTF 247
Query: 64 GANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL 123
G + +LG GD + PK + +L D RI+ IA G H+ A D GK++SWG+ GQL
Sbjct: 248 GWSKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQL 307
Query: 124 GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + P+ ++ L V ++CG + AVTE G ++ WG + QLG
Sbjct: 308 GIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLG 360
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+++GR++ G+LGLG +P V++L V +++CGG ++ T G
Sbjct: 139 ELFSFGRNQ-NGQLGLG------TTSDAILPQPVESLRGQEVTSIACGGEHSLAATSAGD 191
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG LG G P + L V++ +A G HS+A + G V+++G+
Sbjct: 192 VFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSK 251
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH +Q VP +E+L D + IA G ++A + GKLY WG K QLG+
Sbjct: 252 YGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGI 309
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 83/151 (54%), Gaps = 2/151 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V +VSCG ++ L G +WG + +LG GD KP+ + +L+ + +G
Sbjct: 16 VTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGA 75
Query: 101 YHSLALTD-DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
+S+AL+ +V+SWG+G G+LGH + +P I ALA + +ACG + + AVT
Sbjct: 76 EYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVT 135
Query: 160 EKGKLYMWGNAKDSQLGV-PGLPVVQPCPVE 189
+ G+L+ +G ++ QLG+ + P PVE
Sbjct: 136 DTGELFSFGRNQNGQLGLGTTSDAILPQPVE 166
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTE-EGQLWN 62
+WGR E +G+LG G + + + +AV G +++ L++ ++++
Sbjct: 37 SWGRGE-DGQLGHGDAEERKKPRAI-----FHLMQASCSAVCSGAEYSVALSQPRNEVYS 90
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG LG GD + P+ + L I+++A G H+LA+TD G++FS+G +GQ
Sbjct: 91 WGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQ 150
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
LG T + +P +E+L + VT IACGG S A T G ++ WG + LGV
Sbjct: 151 LGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGV 205
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
D+R+ ++ G HSLAL +G SWG G GQLGH + +K P I L + +
Sbjct: 13 DLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVC 72
Query: 150 CGGSTSAAVTE-KGKLYMWG 168
G S A+++ + ++Y WG
Sbjct: 73 SGAEYSVALSQPRNEVYSWG 92
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 105/190 (55%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG +P K++A + + V+ G T +TE+G
Sbjct: 129 EVQSWGRNQ-NGQLGLGDTEDS------LVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 181
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + + ++ +A G H+++++ G ++++G+
Sbjct: 182 LYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK 241
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH ++ +P +EAL++ F++ I+ G + A+T GKLY WG K Q+GV G
Sbjct: 242 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGV-G 300
Query: 180 LPVVQPCPVE 189
+ Q PV+
Sbjct: 301 NNLDQCSPVQ 310
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + GRLG G + L P +KAL + + ++CG + +T EG+
Sbjct: 77 EVYSWGWGD-FGRLGHG------NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 129
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG GD P+ + +RI +A G H+ A+T+DG ++ WG+G
Sbjct: 130 VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGR 189
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + + E ++ +ACG + +V+ G LY +G +K QLG
Sbjct: 190 YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLG 246
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG-QLW 61
+WGR E +G+LG G +A P+++ AL + +V+CG T+ ++ G +++
Sbjct: 27 SWGRGE-DGQLGHG------DAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVY 79
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P + L +RI QIA G H LA+T +G+V SWG +G
Sbjct: 80 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNG 139
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+A + +A G +AAVTE G LY WG + LG+
Sbjct: 140 QLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 195
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + +P +V + ++ V+CG T+ ++ G
Sbjct: 181 DLYGWGWGR-YGNLGLG------DRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P L L + I QI+ G H++ALT DGK++ WG+
Sbjct: 234 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNK 293
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G +Q P+ + D+ V ++CG + AVTE+ ++ WG + QLG+
Sbjct: 294 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGI 351
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A P V +S G ++ L + +WG + +LG GD P L L +I+
Sbjct: 1 APPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVS 60
Query: 96 IANGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
+ G H++A + G +V+SWG+G G+LGH + + P+ I+AL + IACG S
Sbjct: 61 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSH 120
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
AVT +G++ WG ++ QLG+
Sbjct: 121 CLAVTMEGEVQSWGRNQNGQLGL 143
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
IP K++AL + GGF TM LT +G+L+ WG N ++G G+ + P +
Sbjct: 255 IPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 314
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
D +++Q++ G H+LA+T+ VF+WG G +GQLG + ++ P +IEAL+
Sbjct: 315 DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 367
>gi|307107146|gb|EFN55390.1| hypothetical protein CHLNCDRAFT_57991 [Chlorella variabilis]
Length = 596
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 86/155 (55%), Gaps = 10/155 (6%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP------KLLPNLVDVR 92
+ +A VS G + ++ G+L+ WG S+ ELG G GW P +++ +L R
Sbjct: 221 IHLAVVSAGSSHSASISRRGELYTWGLASSGELGHG----GWTPIEVSCPRMITSLQRTR 276
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
I+ ++ G H+LA+++ G+++S G G HGQLGH ++ + M+++ + E V +A G
Sbjct: 277 IVSVSCGANHTLAISETGQLWSCGRGRHGQLGHGHFHDEGLLMLVDTIRHERVVSVAAGR 336
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
+ S A+ GK++ WG+A QLG L V P
Sbjct: 337 AHSVALAADGKIFTWGDASKGQLGHAQLAAVMQGP 371
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 1 ELYTWGRDEGEGRLGLGP----GRGPN-EAGGLSIPSKVKAL-------PVPVAAVSCGG 48
+++TWG D +G+LG +GPN + + P +++L P V A++ GG
Sbjct: 347 KIFTWG-DASKGQLGHAQLAAVMQGPNPQPLSIPFPQAIQSLEPARLKPPARVTAIAAGG 405
Query: 49 FFTMVLTEEGQLWNWGANSN--YELGRGDRVGGWKPKLLPNLVD------VRIIQIANGG 100
+M +T G L +G+N + LG GD + P +P ++ VR +Q+ G
Sbjct: 406 DHSMAVTVAGALLAFGSNKHGQARLGTGDTLDRMIPTEVPLALESEGGQLVRAMQVHCGA 465
Query: 101 YHSLALTD---DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
H+LAL +V S G +G+LG + I AL + + ++ G +AA
Sbjct: 466 QHTLALVQVQGHHQVRSVGGNSYGELGLGDRLERHRFHPIPALKGKSIVCVSVGDWHNAA 525
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
+ + G+LY+WG QLG+
Sbjct: 526 ICQDGRLYVWGRGDCGQLGL 545
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 39 VPVAAVSCGGFFTMVLTE---EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
V V CG T+ L + Q+ + G NS ELG GDR+ + +P L I+
Sbjct: 456 VRAMQVHCGAQHTLALVQVQGHHQVRSVGGNSYGELGLGDRLERHRFHPIPALKGKSIVC 515
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP 134
++ G +H+ A+ DG+++ WG G GQLG +N+ P
Sbjct: 516 VSVGDWHNAAICQDGRLYVWGRGDCGQLGLGDDRNRWAP 554
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS--FTQNQKVPMVIEALADEFVTH 147
D+ + ++ G HS +++ G++++WG G+LGH P +I +L +
Sbjct: 220 DIHLAVVSAGSSHSASISRRGELYTWGLASSGELGHGGWTPIEVSCPRMITSLQRTRIVS 279
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
++CG + + A++E G+L+ G + QLG
Sbjct: 280 VSCGANHTLAISETGQLWSCGRGRHGQLG 308
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 21/113 (18%)
Query: 96 IANGGYHSLAL-------TDDGKVFSWGYGGHGQLGHSFTQNQ-------------KVPM 135
IA G YH++ L + +++ G G HGQLG NQ KVP+
Sbjct: 154 IALGTYHTVGLLCQPEQAAPEYAMYAMGRGFHGQLGLEQFDNQEQPQRVGAVERDVKVPL 213
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG-LPVVQPCP 187
A D + ++ G S SA+++ +G+LY WG A +LG G P+ CP
Sbjct: 214 YQGAPDDIHLAVVSAGSSHSASISRRGELYTWGLASSGELGHGGWTPIEVSCP 266
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG RG +E G S+P +V+ L V V + CG F++ LT+ G++
Sbjct: 3106 VFSWG-DGDFGKLG----RGGSE--GCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEV 3158
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP + L ++I +A G H LA+TD G+V++WG H
Sbjct: 3159 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDH 3218
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P ++ L FV +ACG S S A
Sbjct: 3219 GQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVA 3255
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 97/182 (53%), Gaps = 14/182 (7%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTE 56
+LY G EG GRLGLG + P +V L V AV GG M LT
Sbjct: 2945 KLYACG--EGTNGRLGLG------HNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTL 2996
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+G++++WG + +LG G+R+ KPKL+ +L R+ IA G HS A+T G++++WG
Sbjct: 2997 DGKVFSWGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWG 3056
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQ 174
G +G+LGH Q P ++ L V +ACG + + +TE+G ++ WG+ +
Sbjct: 3057 LGEYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGK 3116
Query: 175 LG 176
LG
Sbjct: 3117 LG 3118
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + L P V L V V+CG T+ LTEE
Sbjct: 3051 ELYTWGLGE-YGRLGHG-----DNCTQLK-PKLVTTLQGHRVVQVACGSRDAQTLCLTEE 3103
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L V ++QI G SLALT G+V++WG
Sbjct: 3104 GLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGK 3163
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I+ L + V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3164 GDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3222
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++ WG ++ E +LG G S+ S++K P+ +A S F +++++G+L
Sbjct: 2893 KVLVWGLNDKE-QLGGLKGSKVKLPTYSSVLSQLK--PIHIAGGSKSLF---IVSQDGKL 2946
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLP--NLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ G +N LG G P+ +P N V+ + + +GG H++ALT DGKVFSWG G
Sbjct: 2947 YACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3006
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LGH + P +IE+L + V IACG S SAA+T G+LY WG + +LG
Sbjct: 3007 EDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLG 3064
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 87/155 (56%), Gaps = 5/155 (3%)
Query: 27 GLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+S P+ V++L + AV+ GG + L+ +G++++WG + +LG G+R +PK
Sbjct: 4009 SVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPK 4068
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
L+ L + +I IA G HS +T G V +WG G +G+LGH +++Q P ++EAL
Sbjct: 4069 LIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGY 4128
Query: 144 FVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
IACG + + +T+ ++ WG+ +LG
Sbjct: 4129 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4163
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
EL+TWGR GRLG G N L +P++V+AL V A+ G +M +T+
Sbjct: 640 ELFTWGRGT-YGRLGHG-----NSDDKL-VPTQVQALKSYKVVDVALGSGDAHSMCVTDN 692
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G L+ WG +LG G G P + LV+V +I +G S+AL+ DG +++WG
Sbjct: 693 GLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVNVS--RIYSGSQFSVALSCDGTLYTWGK 750
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL-- 175
G G+LGH +++ VP ++ AL + + +A G + A+T G+LY WG Q+
Sbjct: 751 GHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQICP 810
Query: 176 -GVPGLPVVQ 184
GV P++
Sbjct: 811 SGVSRDPIIH 820
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G IP K+++L + V V CG F++ LT G +
Sbjct: 4151 VWSWG-DGDYGKLGRGG------SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSV 4203
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G+ +PK + L +II IA G H +A +D G+VF+WG
Sbjct: 4204 YTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDE 4263
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++++L + + + CG + + A++
Sbjct: 4264 GQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4302
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
A C G MVL+ ++W+WGA LG GD V P ++ L + ++ I G +
Sbjct: 572 AAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASY 631
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S A+T G++F+WG G +G+LGH + ++ VP ++AL V +A G + S VT+
Sbjct: 632 SAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTD 691
Query: 161 KGKLYMWGNAKDSQLG 176
G L+ WG+ +LG
Sbjct: 692 NGLLFAWGDGDFGKLG 707
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 10/187 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+ TWG+ GRLG G + P V+AL ++CG T+ +T++
Sbjct: 4096 HVLTWGKGR-YGRLGHGDSEDQLQ------PKLVEALLGYRAIDIACGSGDAQTLCITDD 4148
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + +I++ G S+ALT G V++WG
Sbjct: 4149 DNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGK 4208
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH T + + P + AL + + IA G A ++ G+++ WG+ + QLG
Sbjct: 4209 GDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGD 4268
Query: 178 PGLPVVQ 184
+ +Q
Sbjct: 4269 GTVTAIQ 4275
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
E+++WG +G GRLG G P+ + L V + CG ++ +T G+
Sbjct: 588 EVWSWGAGDG-GRLGHGDTVSKEH------PTMIVGLHEKQVCGIYCGASYSAAITIAGE 640
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGY 117
L+ WG + LG G+ P + L +++ +A +G HS+ +TD+G +F+WG
Sbjct: 641 LFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGD 700
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LG+ +P+ I+ L + V+ I G S A++ G LY WG +LG
Sbjct: 701 GDFGKLGNGSCNGSPIPVQIDTLVN--VSRIYSGSQFSVALSCDGTLYTWGKGHGGRLG 757
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D P L +R IQIA G A+T DGK+++ GYG
Sbjct: 3939 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA 3998
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T + P ++E+L + +A GG A++ G+++ WG +D +LG
Sbjct: 3999 GGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4057
>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 96.7 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 9/181 (4%)
Query: 13 RLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
R LG R P +P ++AL + V VSCG ++ + +G+++ WGA S +L
Sbjct: 52 RGQLGRRRAPRG----ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 72 GRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQ 129
G G+ + + PK + L ++IIQ++ G YHSLAL+ D +VFSWG HGQLG
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 130 NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--LPVVQPCP 187
+Q P + +L + +A GG+ S A++ G + WG+ QL + G +PV P
Sbjct: 168 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKP 227
Query: 188 V 188
+
Sbjct: 228 L 228
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 13/186 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G E +S P K+ L + + VSCG + ++ L+++ Q
Sbjct: 96 VFAWGAGS-EGQLGIG------EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQ 148
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS+ +LG G V P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 149 VFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSN 208
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G + P+ I AL + V +I+CG +A + + GK++ +G+ QL
Sbjct: 209 SAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQL 268
Query: 176 GVPGLP 181
G P
Sbjct: 269 GYSPTP 274
Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKNS-HGQLGLGK-EVPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR V KP + L ++ +I I+ G H+ L DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNA 170
GQLG+S T ++ P ++E + D V+ I CG T A V G++ +G+
Sbjct: 262 DNSSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVISFGHG 315
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + P I L + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 46/85 (54%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
++Q A+G HSL L + +V S G GQLG ++P I+AL V ++CG
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGK 84
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
S AV KG+++ WG + QLG+
Sbjct: 85 EHSLAVCHKGRVFAWGAGSEGQLGI 109
>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 96.7 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 9/181 (4%)
Query: 13 RLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
R LG R P +P ++AL + V VSCG ++ + +G+++ WGA S +L
Sbjct: 52 RGQLGRRRAPRG----ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 72 GRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQ 129
G G+ + + PK + L ++IIQ++ G YHSLAL+ D +VFSWG HGQLG
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 130 NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--LPVVQPCP 187
+Q P + +L + +A GG+ S A++ G + WG+ QL + G +PV P
Sbjct: 168 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKP 227
Query: 188 V 188
+
Sbjct: 228 L 228
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 13/186 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G E +S P K+ L + + VSCG + ++ L+++ Q
Sbjct: 96 VFAWGAGS-EGQLGIG------EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQ 148
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS+ +LG G V P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 149 VFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSN 208
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G + P+ I AL + V +I+CG +A + + GK++ +G+ QL
Sbjct: 209 SAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQL 268
Query: 176 GVPGLP 181
G P
Sbjct: 269 GYSPTP 274
Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKNS-HGQLGLGK-EVPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR V KP + L ++ +I I+ G H+ L DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNA 170
GQLG+S T ++ P ++E + D V+ I CG T A V G++ +G+
Sbjct: 262 DNSSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVISFGHG 315
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + P I L + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 46/85 (54%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
++Q A+G HSL L + +V S G GQLG ++P I+AL V ++CG
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGK 84
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
S AV KG+++ WG + QLG+
Sbjct: 85 EHSLAVCHKGRVFAWGAGSEGQLGI 109
>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
Length = 1020
Score = 96.7 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 9/181 (4%)
Query: 13 RLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
R LG R P +P ++AL + V VSCG ++ + +G+++ WGA S +L
Sbjct: 52 RGQLGRRRAPRG----ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 72 GRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQ 129
G G+ + + PK + L ++IIQ++ G YHSLAL+ D +VFSWG HGQLG
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 130 NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--LPVVQPCP 187
+Q P + +L + +A GG+ S A++ G + WG+ QL + G +PV P
Sbjct: 168 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKP 227
Query: 188 V 188
+
Sbjct: 228 L 228
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 13/186 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G E +S P K+ L + + VSCG + ++ L+++ Q
Sbjct: 96 VFAWGAGS-EGQLGIG------EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQ 148
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS+ +LG G V P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 149 VFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSN 208
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G + P+ I AL + V +I+CG +A + + GK++ +G+ QL
Sbjct: 209 SAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQL 268
Query: 176 GVPGLP 181
G P
Sbjct: 269 GYSPTP 274
Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKNS-HGQLGLGK-EVPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR V KP + L ++ +I I+ G H+ L DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNA 170
GQLG+S T ++ P ++E + D V+ I CG T A V G++ +G+
Sbjct: 262 DNSSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVISFGHG 315
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + P I L + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 46/85 (54%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
++Q A+G HSL L + +V S G GQLG ++P I+AL V ++CG
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGK 84
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
S AV KG+++ WG + QLG+
Sbjct: 85 EHSLAVCHKGRVFAWGAGSEGQLGI 109
>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
Length = 1020
Score = 96.7 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 9/181 (4%)
Query: 13 RLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
R LG R P +P ++AL + V VSCG ++ + +G+++ WGA S +L
Sbjct: 52 RGQLGRRRAPRG----ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 72 GRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQ 129
G G+ + + PK + L ++IIQ++ G YHSLAL+ D +VFSWG HGQLG
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 130 NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--LPVVQPCP 187
+Q P + +L + +A GG+ S A++ G + WG+ QL + G +PV P
Sbjct: 168 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKP 227
Query: 188 V 188
+
Sbjct: 228 L 228
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 13/186 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G E +S P K+ L + + VSCG + ++ L+++ Q
Sbjct: 96 VFAWGAGS-EGQLGIG------EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQ 148
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS+ +LG G V P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 149 VFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSN 208
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G + P+ I AL + V +I+CG +A + + GK++ +G+ QL
Sbjct: 209 SAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQL 268
Query: 176 GVPGLP 181
G P
Sbjct: 269 GYSPTP 274
Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKNS-HGQLGLGK-EVPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR V KP + L ++ +I I+ G H+ L DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNA 170
GQLG+S T ++ P ++E + D V+ I CG T A V G++ +G+
Sbjct: 262 DNSSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVISFGHG 315
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + P I L + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 46/85 (54%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
++Q A+G HSL L + +V S G GQLG ++P I+AL V ++CG
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGK 84
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
S AV KG+++ WG + QLG+
Sbjct: 85 EHSLAVCHKGRVFAWGAGSEGQLGI 109
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 106/190 (55%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG + +P K++A + + V+ G T +TE+G
Sbjct: 141 EVQSWGRNQ-NGQLGLG------DTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 193
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + + ++ +A G H+++++ G ++++G+
Sbjct: 194 LYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK 253
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH ++ +P +EAL++ F++ I+ G + A+T GKLY WG K Q+GV G
Sbjct: 254 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-G 312
Query: 180 LPVVQPCPVE 189
+ Q PV+
Sbjct: 313 NNLDQCSPVQ 322
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + GRLG G + L P +KAL + + ++CG + +T EG+
Sbjct: 89 EVYSWGWGD-FGRLGHG------NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 141
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG GD P+ + +RI +A G H+ A+T+DG ++ WG+G
Sbjct: 142 VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGR 201
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + + E ++ +ACG + +V+ G LY +G +K QLG
Sbjct: 202 YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLG 258
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG-QLW 61
+WGR E +G+LG G +A P+++ AL + +V+CG T+ ++ G +++
Sbjct: 39 SWGRGE-DGQLGHG------DAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVY 91
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P + L +RI QIA G H LA+T +G+V SWG +G
Sbjct: 92 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNG 151
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+A + +A G +AAVTE G LY WG + LG+
Sbjct: 152 QLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 207
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + +P +V + ++ V+CG T+ ++ G
Sbjct: 193 DLYGWGWGR-YGNLGLG------DRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 245
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P L L + I QI+ G H++ALT DGK++ WG+
Sbjct: 246 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 305
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G +Q P+ + D+ V ++CG + AVTE+ ++ WG + QLG+
Sbjct: 306 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGI 363
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Query: 33 KVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR 92
+V A P V +S G ++ L + +WG + +LG GD P L L +
Sbjct: 10 EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ 69
Query: 93 IIQIANGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
I+ + G H++A + G +V+SWG+G G+LGH + + P+ I+AL + IACG
Sbjct: 70 IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 129
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLGV 177
S AVT +G++ WG ++ QLG+
Sbjct: 130 DSHCLAVTMEGEVQSWGRNQNGQLGL 155
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
IP K++AL ++ +S G TM LT +G+L+ WG N ++G G+ + P +
Sbjct: 267 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 326
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
D +++Q++ G H+LA+T+ VF+WG G +GQLG + ++ P +IEAL+
Sbjct: 327 DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 379
>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
Length = 531
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGSTTNQ------PTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTTNQPTP 171
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD+ +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ +Q C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVC 122
>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Papio anubis]
gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
protein 1 [Macaca fascicularis]
gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
Length = 531
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++ L + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T++ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TDD +VF +G LG Q+ VP +E L+ + + ++ G G TE
Sbjct: 34 ALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ +Q C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVC 122
>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
leucogenys]
Length = 531
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++ L + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Canis lupus familiaris]
Length = 531
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGSTTNQ------PTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTTNQPTP 171
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD+ +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ +Q C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVC 122
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 105/190 (55%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG +P K++A + + V+ G T +TE+G
Sbjct: 129 EVQSWGRNQ-NGQLGLGDTEDS------LVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 181
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + + ++ +A G H+++++ G ++++G+
Sbjct: 182 LYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK 241
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH ++ +P +EAL++ F++ I+ G + A+T GKLY WG K Q+GV G
Sbjct: 242 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-G 300
Query: 180 LPVVQPCPVE 189
+ Q PV+
Sbjct: 301 NNLDQCSPVQ 310
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + GRLG G + L P +KAL + + ++CG + +T EG+
Sbjct: 77 EVYSWGWGD-FGRLGHG------NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 129
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG GD P+ + +RI +A G H+ A+T+DG ++ WG+G
Sbjct: 130 VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGR 189
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + + E ++ +ACG + +V+ G LY +G +K QLG
Sbjct: 190 YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLG 246
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG-QLW 61
+WGR E +G+LG G +A P+++ AL + +V+CG T+ ++ G +++
Sbjct: 27 SWGRGE-DGQLGHG------DAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVY 79
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P + L +RI QIA G H LA+T +G+V SWG +G
Sbjct: 80 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNG 139
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+A + +A G +AAVTE G LY WG + LG+
Sbjct: 140 QLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 195
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + +P +V + ++ V+CG T+ ++ G
Sbjct: 181 DLYGWGWGR-YGNLGLG------DRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P L L + I QI+ G H++ALT DGK++ WG+
Sbjct: 234 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 293
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G +Q P+ + D+ V ++CG + AVTE+ ++ WG + QLG+
Sbjct: 294 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGI 351
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A P V +S G ++ L + +WG + +LG GD P L L +I+
Sbjct: 1 APPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVS 60
Query: 96 IANGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
+ G H++A + G +V+SWG+G G+LGH + + P+ I+AL + IACG S
Sbjct: 61 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSH 120
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
AVT +G++ WG ++ QLG+
Sbjct: 121 CLAVTMEGEVQSWGRNQNGQLGL 143
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
IP K++AL ++ +S G TM LT +G+L+ WG N ++G G+ + P +
Sbjct: 255 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 314
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
D +++Q++ G H+LA+T+ VF+WG G +GQLG + ++ P +IEAL+
Sbjct: 315 DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 367
>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
gallopavo]
Length = 537
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 96/168 (57%), Gaps = 4/168 (2%)
Query: 14 LGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYEL 71
L G ++ +P K++AL ++++S G G ++ TE+G+++ WG N +L
Sbjct: 54 LNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQL 113
Query: 72 GRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
G G G P ++ NL+ ++I++A G +HS+AL+ DG +++WGY GQ+G T N
Sbjct: 114 GNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTAN 173
Query: 131 QKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
Q P V L D+ V IACG ++S AV G++Y WG + QLG+
Sbjct: 174 QPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGL 221
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 91/178 (51%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y WG + G +LG G G + L V V+CG +M L+ +G L
Sbjct: 101 EVYAWGHN-GYSQLG----NGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDL 155
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N+ ++G G P+ + N L D ++ IA G S+A+ ++G+V+ WGY G
Sbjct: 156 YAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNG 215
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + AL + IACG + + A+T++G LY WG QLG
Sbjct: 216 NGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGT 273
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+LY WG + G++G G N+ + + ++ V ++CG +M + G++
Sbjct: 154 DLYAWGYNNC-GQVG--SGSTANQPTPRRVSNCLQ--DKMVVGIACGQTSSMAVVNNGEV 208
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG N N +LG G+ P + L V I+QIA G H+LALTD+G +++WG +
Sbjct: 209 YGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTY 268
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG NQ P+ I + V AC TSAA T+ G++YMWG + + +P
Sbjct: 269 GQLGTGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVVLPH 328
Query: 180 L 180
L
Sbjct: 329 L 329
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDGKVF 113
T +++ +G N + LG GD PK L L +I ++ G G H L T+DG+V+
Sbjct: 44 THNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVY 103
Query: 114 SWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+WG+ G+ QLG+ T P+ V L + V +ACG S A++ G LY WG
Sbjct: 104 AWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNC 163
Query: 173 SQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 164 GQVG-SGSTANQPTP 177
>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
Length = 537
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 96/168 (57%), Gaps = 4/168 (2%)
Query: 14 LGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYEL 71
L G ++ +P K++AL ++++S G G ++ TE+G+++ WG N +L
Sbjct: 54 LNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQL 113
Query: 72 GRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
G G G P ++ NL+ ++I++A G +HS+AL+ DG +++WGY GQ+G T N
Sbjct: 114 GNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTAN 173
Query: 131 QKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
Q P V L D+ V IACG ++S AV G++Y WG + QLG+
Sbjct: 174 QPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGL 221
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 91/178 (51%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y WG + G +LG G G + L V V+CG +M L+ +G L
Sbjct: 101 EVYAWGHN-GYSQLG----NGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDL 155
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N+ ++G G P+ + N L D ++ IA G S+A+ ++G+V+ WGY G
Sbjct: 156 YAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNG 215
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + AL + IACG + + A+T++G LY WG QLG
Sbjct: 216 NGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGT 273
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+LY WG + G++G G N+ + + ++ V ++CG +M + G++
Sbjct: 154 DLYAWGYNNC-GQVG--SGSTANQPTPRRVSNCLQ--DKMVVGIACGQTSSMAVVNNGEV 208
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG N N +LG G+ P + L V I+QIA G H+LALTD+G +++WG +
Sbjct: 209 YGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTY 268
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG NQ P+ I + V AC TSAA T+ G++YMWG + + +P
Sbjct: 269 GQLGTGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVVLPH 328
Query: 180 L 180
L
Sbjct: 329 L 329
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDGKVF 113
T +++ +G N + LG GD PK L L +I ++ G G H L T+DG+V+
Sbjct: 44 THNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVY 103
Query: 114 SWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+WG+ G+ QLG+ T P+ V L + V +ACG S A++ G LY WG
Sbjct: 104 AWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNC 163
Query: 173 SQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 164 GQVG-SGSTANQPTP 177
>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
Length = 1031
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 100/182 (54%), Gaps = 13/182 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G + N IP K+K L + + VSCG + ++ L+E+GQ
Sbjct: 106 RVFAWGAG-SEGQLGIGEFKEIN-----LIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQ 159
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG+NS+ +LG G + P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 160 VFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSN 219
Query: 119 GHGQLGHSFTQNQKV----PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
GQL F N V P + AL V +I+CG +A +T+ GK++ +G+ Q
Sbjct: 220 NAGQLAF-FGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQ 278
Query: 175 LG 176
LG
Sbjct: 279 LG 280
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 86/152 (56%), Gaps = 3/152 (1%)
Query: 31 PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNL 88
P ++AL + V VSCG ++ + +G+++ WGA S +LG G+ + P+ + L
Sbjct: 77 PKPIQALETLRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTL 136
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
++IIQ++ G YHSLAL++DG+VFSWG HGQLG +Q P + +L +
Sbjct: 137 TGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQ 196
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A GG+ S A++ G + WG+ QL G
Sbjct: 197 VAAGGAHSFALSLSGTSFGWGSNNAGQLAFFG 228
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 96/173 (55%), Gaps = 12/173 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG + G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 159 QVFSWGSN-SHGQLGLG-KELPSQAS----PQRVRSLDGIPLAQVAAGGAHSFALSLSGT 212
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+N+ +L G V +KP+ + L + ++ I+ G H+ LT +GKVF++G
Sbjct: 213 SFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFG 272
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWG 168
GQLGHS T + P ++E + + V+ I CG T A V G++ +G
Sbjct: 273 DNSCGQLGHSPTAEKTGPQLMEGI-EGLVSQIDCGSYHTLAYVYTTGQVVSFG 324
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L +G + + G NS +LGR +PK + L +R+ ++ G HSLA+ G
Sbjct: 46 SLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCGKEHSLAVCYKG 105
Query: 111 KVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + +P I+ L + ++CG S A++E G+++ WG+
Sbjct: 106 RVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGS 165
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 166 NSHGQLGL 173
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 45/83 (54%)
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
Q A+G HSL L DG V S G GQLG Q ++ P I+AL V ++CG
Sbjct: 38 QAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCGKEH 97
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
S AV KG+++ WG + QLG+
Sbjct: 98 SLAVCYKGRVFAWGAGSEGQLGI 120
>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
[Strongylocentrotus purpuratus]
Length = 536
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
TE G++++WG N +LG G G P ++ NL +I QIA G +HSL LTD G+VF
Sbjct: 95 TENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVF 154
Query: 114 SWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+WGY GQ+G T N P V+ L + V IACG ++S AV + G++Y WG +
Sbjct: 155 AWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGEVYGWGYNGN 214
Query: 173 SQLGVPGLPVVQPCPVE 189
QLG+ G V QP P +
Sbjct: 215 GQLGL-GNNVNQPSPCK 230
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 92/184 (50%), Gaps = 18/184 (9%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y+WG + G GL P R G I + ++CG ++VL
Sbjct: 99 EIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKI-----------SQIACGSHHSLVL 147
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
T+ G+++ WG N+ ++G G P K++ L R++ IA G SLA+ D G+V+
Sbjct: 148 TDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGEVY 207
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
WGY G+GQLG NQ P + +L ++ ACG + S A++++G +Y WG
Sbjct: 208 GWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGANSYG 267
Query: 174 QLGV 177
QLG
Sbjct: 268 QLGT 271
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G +S P KV ++ V +++CG ++ + + G
Sbjct: 152 EVFAWGYNNC-GQVGSGA------TANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSG 204
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ V P + +L + I Q A G HS+AL+D+G +++WG
Sbjct: 205 EVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGAN 264
Query: 119 GHGQLGHSFTQN----QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
+GQLG N K+ I D TH A SAA+T+ GK+YMWG +
Sbjct: 265 SYGQLGTGNKANLCGAAKIGESIGRFIDIAATHYA---HISAAMTQTGKVYMWGQCRGQS 321
Query: 175 LGVP 178
+ P
Sbjct: 322 ITSP 325
>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
[Cricetulus griseus]
Length = 887
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 8/174 (4%)
Query: 10 GEGRLG-LGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANS 67
G+ LG LG R N P ++AL + + VSCG ++ + +G+++ WGA S
Sbjct: 46 GDNSLGQLGQKREQNTEQ----PEPIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGS 101
Query: 68 NYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS 126
+LG G+ + P + L ++IIQ++ G YHSLAL++DG+VFSWG GQLG
Sbjct: 102 EGQLGIGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLG 161
Query: 127 F-TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +Q P + +L + +A GGS S A++ G Y WG+ QL + G
Sbjct: 162 MQSSSQASPQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSG 215
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 53/175 (30%), Positives = 94/175 (53%), Gaps = 12/175 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ +G+LGLG ++ + P KV +L +P+A V+ GG + L+ G
Sbjct: 146 QVFSWGKNS-QGQLGLG-----MQSSSQASPQKVTSLEGIPLAQVAAGGSHSFALSLTGT 199
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L G V KP + L ++ +I I+ G H+ LT DG+VF++G
Sbjct: 200 SYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFG 259
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNA 170
GQL ++ ++ P ++E + + V+ I CG T A V G++ G+
Sbjct: 260 DNSSGQLQNNPRGKRRGPQLVEGIKGQ-VSKIECGSYHTIAYVYTTGQVVSLGHG 313
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++++ G NS +LG+ +P+ + L + I ++ G HS+A+ G
Sbjct: 33 SLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALGTLDIDLVSCGKEHSIAVCHKG 92
Query: 111 KVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + +PM I+ L + ++CG S A++E G+++ WG
Sbjct: 93 RVFAWGAGSEGQLGIGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGK 152
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 153 NSQGQLGL 160
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 53/97 (54%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P+ L + ++Q A+G HSL L + +V+S G GQLG QN + P I+AL
Sbjct: 11 QPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQAL 70
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++CG S AV KG+++ WG + QLG+
Sbjct: 71 GTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGI 107
>gi|391344902|ref|XP_003746733.1| PREDICTED: LOW QUALITY PROTEIN: RCC1 and BTB domain-containing
protein 1-like [Metaseiulus occidentalis]
Length = 550
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 94/182 (51%), Gaps = 14/182 (7%)
Query: 2 LYTWGRDEGEGRLGLGPG---RGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
+YTWG++ G+LGL + P + GG K +SCG FT + + G
Sbjct: 168 VYTWGQNNC-GQLGLSASVNHQSPRKVGGAIAEMKC-------TGISCGHNFTTAVFDTG 219
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG+N N +LG G P + L DV I ++A G H+LALTD+G V+ WG
Sbjct: 220 EVYVWGSNGNGQLGLGSLTNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGAN 279
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACG--GSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ +P++++ + + +A TSAA+TE K+ MWG + +
Sbjct: 280 ALGQLGTENKTNQSIPVLMKTIHGR-INEVAATQYNQTSAAMTETSKVLMWGLCRGQHVT 338
Query: 177 VP 178
VP
Sbjct: 339 VP 340
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 14/180 (7%)
Query: 21 GPNEAGGLSI--------PSKVKALPVP-VAAVSCG-GFFTMVLTEEGQLWNWGANSNYE 70
G N AG L I P+KV+ L V + +CG G + LT G+++ WG N +
Sbjct: 69 GSNAAGCLGIGDTRSCLSPTKVEGLSKKGVQSFACGTGPHVLALTARGEVYGWGHNGYSQ 128
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
+G P L+ + V QIA GGYHS+ T G V++WG GQLG S + N
Sbjct: 129 VGNDQNSQANSPVLVFDRQPVA--QIACGGYHSVIRTVSGGVYTWGQNNCGQLGLSASVN 186
Query: 131 QKVPMVI-EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
+ P + A+A+ T I+CG + + AV + G++Y+WG+ + QLG+ L QP PV+
Sbjct: 187 HQSPRKVGGAIAEMKCTGISCGHNFTTAVFDTGEVYVWGSNGNGQLGLGSL-TNQPFPVK 245
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+++TEE ++W G+N+ LG GD P + L + A G G H LALT G
Sbjct: 57 LLVTEEDEVWAMGSNAAGCLGIGDTRSCLSPTKVEGLSKKGVQSFACGTGPHVLALTARG 116
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+V+ WG+ G+ Q+G+ QN + + + V IACGG S T G +Y WG
Sbjct: 117 EVYGWGHNGYSQVGND--QNSQANSPVLVFDRQPVAQIACGGYHSVIRTVSGGVYTWGQN 174
Query: 171 KDSQLGVPG 179
QLG+
Sbjct: 175 NCGQLGLSA 183
>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
caballus]
Length = 531
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ IP K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LIPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD+ +VF +G LG Q+ +P +EAL + + ++ G G TE
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ +Q C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVC 122
>gi|402873781|ref|XP_003900735.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Papio anubis]
Length = 398
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
+K L V A G T+ +TE GQ+W+WG +LGRG G PKL+ L D+ +
Sbjct: 6 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 65
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
+++ G S+ALT DG+V+SWG G + +LGH ++ + P ++E L + V +A G +
Sbjct: 66 VKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGST 125
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
A+TE +++ WG+ Q L V +P P
Sbjct: 126 HCLALTEDSEVHSWGSNDQCQ-HFDTLRVTKPEP 158
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 31 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 83
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 84 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 143
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q + + P + L + + IACG + S + W + + +G+
Sbjct: 144 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGLRV 194
Query: 180 LPVVQPCPV 188
VV C +
Sbjct: 195 PFVVDICSM 203
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 84 LLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
L+ L +++I +A +G +LA+T++G+V+SWG G +G+LG + K P +IE L
Sbjct: 2 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 61
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
D V + CG S A+T+ G++Y WG + +LG
Sbjct: 62 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 96
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 89/164 (54%), Gaps = 7/164 (4%)
Query: 16 LGPGRGPNEAGGLSIPSKVKALPVP--VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR 73
LG G PN+ +P +V+ LP P V +CG + T+ LTEEG +++ G N N +LG
Sbjct: 220 LGIGTRPNQL----LPHRVE-LPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGL 274
Query: 74 GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV 133
G R P L+ L + IA G H+ + +DGK+F++GY GQLG T +
Sbjct: 275 GSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSS 334
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
PM +E L + V I+CG + ++E G+L+ +G QLG+
Sbjct: 335 PMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGL 378
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 99/181 (54%), Gaps = 14/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y+ G + G+LGLG + + L + +K V V + SC ++V++ +G
Sbjct: 156 QVYSCGCNN-HGQLGLGSTK---MSPSLLLVESLK--HVRVLSASCSYHHSVVVSSDGSA 209
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDV---RIIQIANGG-YHSLALTDDGKVFSWG 116
+++G N +LG G R +LLP+ V++ ++++A G YH++ LT++G VFS G
Sbjct: 210 FSFGLNDCGQLGIGTR----PNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCG 265
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG + VP +I AL + + IACG S + V E GKL+ +G QLG
Sbjct: 266 KNLNGQLGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLG 325
Query: 177 V 177
+
Sbjct: 326 L 326
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+++ G++ G+LGLG N +P+ + AL P + ++CG T V+ E+G+L
Sbjct: 261 VFSCGKNLN-GQLGLGSRSSTN------VPTLIAALQERPASMIACGYSHTCVVLEDGKL 313
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ +G N +LG G P + L +V++++I+ G + + L++ G+++S+G H
Sbjct: 314 FTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCH 373
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + ++ VP+++ ++ + ++ IACG A++
Sbjct: 374 GQLGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAIS 412
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Query: 39 VPVAAVSC--GGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQI 96
V VSC G +V+T GQ+++ G N++ +LG G L+ +L VR++
Sbjct: 134 CKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSA 193
Query: 97 ANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
+ +HS+ ++ DG FS+G GQLG NQ +P +E + V ACG +
Sbjct: 194 SCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTI 253
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
+TE+G ++ G + QLG+
Sbjct: 254 FLTEEGMVFSCGKNLNGQLGL 274
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 8/108 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + +G+LGLG +S P +V+ L V V +SCG FT VL+E G+
Sbjct: 312 KLFTFGYNH-QGQLGLG------HTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGE 364
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
LW++G N + +LG GD P L+P++ + +IA G +H +A++
Sbjct: 365 LWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAIS 412
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP------- 82
+ S + V VAA S +F LTEEG+++ G NS +L R G
Sbjct: 67 VQSLRRKRIVKVAAGSETSYF---LTEEGKVYCCGLNSTGQLARETHQGSANRSKEYSSD 123
Query: 83 -KLLPNLV-DVRIIQIA--NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE 138
+L+ L D +++Q++ NG H L +T G+V+S G HGQLG T+ +++E
Sbjct: 124 IELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSLLLVE 183
Query: 139 ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLP 181
+L V +C S V+ G + +G QLG+ P
Sbjct: 184 SLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRP 226
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G N ELG + L+ +L RI+++A G S LT++GKV+ G
Sbjct: 42 VFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGLNS 101
Query: 120 HGQLGH-----SFTQNQKVPMVIEALA----DEFVTHIAC--GGSTSAAVTEKGKLYMWG 168
GQL S ++++ IE + D V ++C G VT G++Y G
Sbjct: 102 TGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSCG 161
Query: 169 NAKDSQLGV 177
QLG+
Sbjct: 162 CNNHGQLGL 170
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
D VF+ G G+LGHS + Q ++++L + + +A G TS +TE+GK+Y G
Sbjct: 39 DCGVFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCG 98
Query: 169 NAKDSQLG 176
QL
Sbjct: 99 LNSTGQLA 106
>gi|395859038|ref|XP_003801853.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
[Otolemur garnettii]
Length = 479
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 7/181 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG NQ P+ + AL V ++C TSAA T+ G +YMWG + + +P
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQVSCHSAHTSAAKTQGGHVYMWGQCRGQSVVLPH 270
Query: 180 L 180
L
Sbjct: 271 L 271
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 34 ALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG 176
G +Y WG+ SQLG
Sbjct: 94 GVVYAWGHNGYSQLG 108
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 3/170 (1%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVPVAAVSCGGFFTMVLTEEGQ 59
LYTWG ++ G+LG+G + P V K L V VSCG F T LT+ +
Sbjct: 112 RLYTWGCNKS-GKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNK 170
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG LG GD + PKL+ +L + + I GG+H+ L ++GKV+ G G
Sbjct: 171 AYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGA 230
Query: 120 HGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G+LG ++ +P +++ +L ++ + ++ G SA +T KGK+Y WG
Sbjct: 231 FGKLGFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWG 280
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 14/182 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL WG G G+LGLG + + IP + ++ V VSC + + E+G+L
Sbjct: 62 ELIVWGYG-GCGQLGLG------DLKDIVIPRVMTSIK-NVINVSCSDRHSAAILEDGRL 113
Query: 61 WNWGANSNYELGRGDRVGG------WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
+ WG N + +LG G P+L+ L++ ++I+++ G +H+ LTD K ++
Sbjct: 114 YTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYT 173
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG G G+LGH T + P +IE+LA V +I CGG +A + GK+Y G +
Sbjct: 174 WGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGK 233
Query: 175 LG 176
LG
Sbjct: 234 LG 235
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 18/192 (9%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLW 61
YTWG +GRLG G + + P +++L + V + CGG T +L G+++
Sbjct: 172 YTWGLGM-QGRLGHG------DTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVY 224
Query: 62 NWGANSNYELGRGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G + +LG G + + PKLL +L + I +++ G HS +T GKV++WG G
Sbjct: 225 FCGGGAFGKLGFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQG-- 282
Query: 121 GQLGHSFT---QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G+LGH + + P ++E L +I+CG S + ++ G +Y WG ++ GV
Sbjct: 283 GRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGVTRNLGHGV 342
Query: 178 ----PGLPVVQP 185
P P + P
Sbjct: 343 IDSKPNDPTLHP 354
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG++ +LG +PKL+ +L RI ++ GG+HS +T G++ WGYGG G
Sbjct: 13 WGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCG 72
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +P V+ ++ + V +++C SAA+ E G+LY WG K +LG+
Sbjct: 73 QLGLGDLKDIVIPRVMTSIKN--VINVSCSDRHSAAILEDGRLYTWGCNKSGKLGI 126
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAA-VSCGGFFTMVLTEEGQ 59
++YTWG+ G + GP E LS P V+ L +A +SCG T+V++ G
Sbjct: 275 KVYTWGQGGRLGHIYNGP-----EPDILS-PKLVEKLNSIIAVNISCGHSHTVVISNIGD 328
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
++ WG N G D P L P L + I+Q++ G H++AL+D
Sbjct: 329 VYAWGVTRNLGHGVIDSKPN-DPTLHPILQNKNIVQVSCGKTHTIALSD 376
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALAD-EFVTHIACGGSTSAAVTEKGKLYMWGNA 170
V +WG +GQLG + ++ P +IE+L + + CGG SA +T G+L +WG
Sbjct: 10 VVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYG 69
Query: 171 KDSQLGVPGLP-VVQP 185
QLG+ L +V P
Sbjct: 70 GCGQLGLGDLKDIVIP 85
>gi|194227810|ref|XP_001917704.1| PREDICTED: LOW QUALITY PROTEIN: x-linked retinitis pigmentosa
GTPase regulator-like [Equus caballus]
Length = 915
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 107/180 (59%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG D EG++GL + +P +V + P++ VSCG + + +T EG+L
Sbjct: 160 ELFMWG-DNSEGQIGL------KNIDNVCVPHQV-TIGKPISWVSCGYYHSAFITTEGEL 211
Query: 61 WNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G + +LG + + P+L+P + + ++IQ+A GG H++ LT++ V+++G G
Sbjct: 212 YTFGEPESGKLGLPSKLLINHRIPQLVPGIPE-KVIQVACGGGHTVVLTENA-VYTFGLG 269
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P VIE + D+ +++I+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 270 QFGQLGLGTFIFETSEPTVIEHIKDQKISYISCGENHTALITDTGLIYTFGDGRHGKLGL 329
Score = 76.6 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 15/182 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ +KAL P V V+CG T+V TE G+
Sbjct: 55 KLYMFGSNNW-GQLGLG------SESPVSKPTCIKALKPEKVKFVACGRTHTIVATEGGK 107
Query: 60 LWNWGANSNYELGRGD---RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
++ G NS +LG GD R + K + +I Q++ G S ALT+DG++F WG
Sbjct: 108 VYATGGNSEGQLGLGDDEDRNTFHRIKFFTS--QHKIKQLSAGSSSSAALTEDGELFMWG 165
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G N VP + + ++ ++CG SA +T +G+LY +G + +LG
Sbjct: 166 DNSEGQIGLKNIDNVCVPH--QVTIGKPISWVSCGYYHSAFITTEGELYTFGEPESGKLG 223
Query: 177 VP 178
+P
Sbjct: 224 LP 225
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 84/156 (53%), Gaps = 7/156 (4%)
Query: 29 SIPSKV---KALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+IPSK +P+ +A CG T V+T +L+ +G+N+ +LG G KP +
Sbjct: 25 NIPSKFWFKNDIPICLA---CGDEHTAVVTGNNKLYMFGSNNWGQLGLGSESPVSKPTCI 81
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF- 144
L ++ +A G H++ T+ GKV++ G GQLG +++ I+ +
Sbjct: 82 KALKPEKVKFVACGRTHTIVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKFFTSQHK 141
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+ ++ G S+SAA+TE G+L+MWG+ + Q+G+ +
Sbjct: 142 IKQLSAGSSSSAALTEDGELFMWGDNSEGQIGLKNI 177
>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
Length = 531
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 34 ALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ +Q C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVC 122
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 106/190 (55%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG + +P K++A + + V+ G T +TE+G
Sbjct: 140 EVQSWGRNQ-NGQLGLG------DTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 192
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + + ++ +A G H+++++ G ++++G+
Sbjct: 193 LYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK 252
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH ++ +P +EAL++ F++ I+ G + A+T GKLY WG K Q+GV G
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-G 311
Query: 180 LPVVQPCPVE 189
+ Q PV+
Sbjct: 312 NNLDQCSPVQ 321
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + GRLG G + L P +KAL + + ++CG + +T EG+
Sbjct: 88 EVYSWGWGD-FGRLGHG------NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 140
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG GD P+ + +RI +A G H+ A+T+DG ++ WG+G
Sbjct: 141 VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGR 200
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + + E ++ +ACG + +V+ G LY +G +K QLG
Sbjct: 201 YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLG 257
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG-QLW 61
+WGR E +G+LG G +A P+++ AL + +V+CG T+ ++ G +++
Sbjct: 38 SWGRGE-DGQLGHG------DAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVY 90
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P + L +RI QIA G H LA+T +G+V SWG +G
Sbjct: 91 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNG 150
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+A + +A G +AAVTE G LY WG + LG+
Sbjct: 151 QLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 206
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + +P +V + ++ V+CG T+ ++ G
Sbjct: 192 DLYGWGWGR-YGNLGLG------DRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P L L + I QI+ G H++ALT DGK++ WG+
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 304
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G +Q P+ + D+ V ++CG + AVTE+ ++ WG + QLG+
Sbjct: 305 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGI 362
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Query: 33 KVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR 92
+V A P V +S G ++ L + +WG + +LG GD P L L +
Sbjct: 9 EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ 68
Query: 93 IIQIANGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
I+ + G H++A + G +V+SWG+G G+LGH + + P+ I+AL + IACG
Sbjct: 69 IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLGV 177
S AVT +G++ WG ++ QLG+
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGL 154
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
IP K++AL ++ +S G TM LT +G+L+ WG N ++G G+ + P +
Sbjct: 266 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 325
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
D +++Q++ G H+LA+T+ VF+WG G +GQLG + ++ P +IEAL+
Sbjct: 326 DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378
>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
Length = 531
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 30 IPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLP 86
+P K++AL + ++S G G ++ TE+G ++ WG N +LG G G P ++
Sbjct: 64 VPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCT 123
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFV 145
NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P V L + V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IACG ++S AV + G++Y WG + QLG+
Sbjct: 184 VGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + + AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 35.4 bits (80), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD +VF +G LG + VP +EAL + + ++ G G TE
Sbjct: 34 ALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG GL +Q C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGLAPIQVC 122
>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Otolemur garnettii]
Length = 531
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERIVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 34 ALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ +Q C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVC 122
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG E +G+LG G L P V+ L + V+CG + ++ +G+
Sbjct: 3202 KVFSWGEGE-DGKLGHG------NRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGE 3254
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD KPKL+ L R+IQ+A G +LALT+DG VFSWG
Sbjct: 3255 LYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3314
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LG ++ P IE L+ V I CG S A+T G+++ WG +LG
Sbjct: 3315 GDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG 3373
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG + +P ++ L V AV GG + LT +G++++WG +
Sbjct: 3158 GRLGLG------VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED 3211
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R KP+L+ L +I +A G HS A++ G++++WG G +G+LGH
Sbjct: 3212 GKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3271
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P ++ ALA V +ACG + + A+TE G ++ WG+ +LG
Sbjct: 3272 STQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3321
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G + P +++ L + V + CG F++ LT G++
Sbjct: 3309 VFSWG-DGDFGKLGRGGSEGSD------TPHEIERLSGIGVIQIECGAQFSLALTRAGEV 3361
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP+ + L R+I +A G H LA+TD G+V++WG H
Sbjct: 3362 WTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDH 3421
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P ++ L FV +ACG S S A
Sbjct: 3422 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3458
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + + L P V AL V V+CG T+ LTE+
Sbjct: 3254 ELYTWGLGE-YGRLGHG-----DNSTQLK-PKLVAALAGRRVIQVACGSRDAQTLALTED 3306
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L + +IQI G SLALT G+V++WG
Sbjct: 3307 GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGK 3366
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I L V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3367 GDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3425
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V AV+ GG + LT EG+++ WG + +LG G+R+ +PKL+ +L + + IA
Sbjct: 4323 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIAC 4382
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSA 156
G HS A+T G V +WG G +G+LGH +++Q P ++EAL IACG + +
Sbjct: 4383 GSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTL 4442
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
+ + ++ WG+ +LG
Sbjct: 4443 CINDDDNVWSWGDGDYGKLG 4462
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 11/170 (6%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWN 62
Y+WG E + RLG G + ++P+K+ L V AV CG ++ +T G L+
Sbjct: 642 YSWGNGE-DHRLGHG------DTHARAVPTKITLLDRCVKAVFCGCSYSAAITCSGNLYT 694
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGGH 120
WG + LG G+ P ++ L + II +A +G HSL LT +G V++WG +
Sbjct: 695 WGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADY 754
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
G+LG+ P+++E+L V + G S A+T G+LY WG A
Sbjct: 755 GKLGNGNLNGSMSPVLVESLPK--VQRVFAGAQFSMALTTDGQLYSWGKA 802
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT+ G +
Sbjct: 4450 VWSWG-DGDYGKLGRG------GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAV 4502
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L +II IA G H +A +D G+V++WG
Sbjct: 4503 YTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDE 4562
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++ AL + + + CG + + A++
Sbjct: 4563 GQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4601
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+ TWG+ GR G LG G ++ P V+AL ++CG T+ + +
Sbjct: 4395 HVLTWGK----GRYGRLGHGDSEDQLR----PQLVEALLGYRAIDIACGSGDAQTLCIND 4446
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + +I++ G S+ALT G V++WG
Sbjct: 4447 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWG 4506
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LGH + + P + AL + + IA G A ++ G++Y WG+ + QLG
Sbjct: 4507 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 4566
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 21 GPNEAGGLSIPSKVKALPV-----PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD 75
G N LS S +LP+ V + C ++L+E+G+L+NW
Sbjct: 553 GFNAEPALSWSSDPSSLPLLNCKFQVQQIVCSESIVLILSEDGKLYNWRMFKPET----- 607
Query: 76 RVGGWKPKLLPNLVDVRIIQIANG--GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV 133
+P+LL + I+ IA+ G H +A+ + +SWG G +LGH T + V
Sbjct: 608 -----EPQLLEEIAHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAV 662
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
P I L D V + CG S SAA+T G LY WG ++LG
Sbjct: 663 PTKI-TLLDRCVKAVFCGCSYSAAITCSGNLYTWGRGTYARLG 704
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+Y WG D G+LG G N G +S P V++LP V V G F+M LT +GQL
Sbjct: 745 HVYAWG-DADYGKLGNG-----NLNGSMS-PVLVESLP-KVQRVFAGAQFSMALTTDGQL 796
Query: 61 WNWGANSNYELGRGDRVGGW--KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++WG S +R W P+L+ L RI+ +A G H LAL+ G+VF WG
Sbjct: 797 YSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWGRN 856
Query: 119 GHGQLGHSFTQNQ---KVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
Q+ S ++ +VP+++ AL + +AC S S T+ +
Sbjct: 857 DSQQICPSSVSSEPLLRVPILV-ALPTLPASGVACTASQSLIWTQSSR 903
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 19/185 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEG 58
LYTWGR RLG G + +P+ V AL + A+ G ++ LT EG
Sbjct: 692 LYTWGRGT-YARLGHG------NSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEG 744
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG +LG G+ G P L+ +L V+ ++ G S+ALT DG+++SWG
Sbjct: 745 HVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQ--RVFAGAQFSMALTTDGQLYSWGKA 802
Query: 119 GHGQLGHSFTQNQ----KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
LGH + VP +I L + + +A G + A++ G+++ WG DSQ
Sbjct: 803 S--CLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWGR-NDSQ 859
Query: 175 LGVPG 179
P
Sbjct: 860 QICPS 864
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
A C G M + ++WG ++ LG GD P + L+D + + G +
Sbjct: 624 ASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKI-TLLDRCVKAVFCGCSY 682
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S A+T G +++WG G + +LGH + +Q +P V+ AL + + +A G + S +T
Sbjct: 683 SAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTS 742
Query: 161 KGKLYMWGNAKDSQLG 176
+G +Y WG+A +LG
Sbjct: 743 EGHVYAWGDADYGKLG 758
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 63 WGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N +LG +G +V P + +R I IA G + +GKV++ G G +
Sbjct: 3100 WGLNDKEQLGGLKGSKVK--VPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGTN 3157
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T N +P + L V +A GG + A+T GK++ WG +D +LG
Sbjct: 3158 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 3215
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 60 LWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG N +LG G R+ P L +R +Q+A G A+T DGK+F+ GY
Sbjct: 4238 IYGWGHNHRGQLGGLEGSRIK--TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4295
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG + +P ++ +L FV +A GG A+T +G++Y WG +D +L
Sbjct: 4296 GSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4355
Query: 176 G 176
G
Sbjct: 4356 G 4356
>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1102
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 103/192 (53%), Gaps = 19/192 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA--LPVPVAAVSCGGFFTMVLTEEG 58
+LYTWG +G LGL G G + + IP +V V VA+++CG + T V+T G
Sbjct: 381 DLYTWG--DGTHSLGL-LGHGNDISHW--IPKRVNGPLEEVRVASIACGPWHTAVVTTAG 435
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
QL+ +G + LG DR + P+ + +L +R ++ A G +H+ A+ +
Sbjct: 436 QLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASS 495
Query: 109 --DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
GK+F+WG G G+LGH + + VP + AL D +ACG S + A+T KG+++
Sbjct: 496 CSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTVALTTKGEVFT 555
Query: 167 WGNAKDSQLGVP 178
G++ QLG P
Sbjct: 556 MGSSMFGQLGDP 567
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 12/173 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L+TWG D +GRLG G + +P+ V AL V+CG T+ LT +G+
Sbjct: 500 KLFTWG-DGDKGRLGHG------DKEQRLVPTCVAALVDHNFRKVACGHSLTVALTTKGE 552
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G++ +LG G + LVD + IA G +H +T +V++WG G
Sbjct: 553 VFTMGSSMFGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGA 612
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+G+LGH +++ P ++EAL ++ V IACG + +AAV L+ W + D
Sbjct: 613 NGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVC----LHKWLSGAD 661
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 6/147 (4%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A+ + V V+CGG ++T++G+++ WG S LG G P+L+ L
Sbjct: 306 AIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEV 365
Query: 96 IANGGYHSLALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIEALADEF-VTHIACGG 152
+A G YH A+T G +++WG G H G LGH + +P + +E V IACG
Sbjct: 366 VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGP 425
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A VT G+L+ +G D GV G
Sbjct: 426 WHTAVVTTAGQLFTFG---DGTFGVLG 449
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L + + + + +A GG H+ +T G+VF+WG G+LGH + P ++EALA
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 359
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ACG AVT G LY WG+ S LG+ G
Sbjct: 360 SSTTEVVACGEYHGCAVTLSGDLYTWGDGTHS-LGLLG 396
>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 1 [Bos taurus]
Length = 531
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 30 IPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLLP 86
+P K++AL + ++S G G ++ TE+G ++ WG N +LG G G P ++
Sbjct: 64 VPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCT 123
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFV 145
NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P V L + V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IACG ++S AV + G++Y WG + QLG+
Sbjct: 184 VGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + + AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
Length = 531
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K+ AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLDALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + + AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLDALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 36.2 bits (82), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD +VF +G LG Q+ VP ++AL + + ++ G G TE
Sbjct: 34 ALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLDALCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG GL +Q C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGLAPIQVC 122
>gi|301112376|ref|XP_002905267.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262095597|gb|EEY53649.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 233
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 82/141 (58%), Gaps = 3/141 (2%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQI 96
V + AV+ GG ++ + G++W WG N+ +LG G + P L+ DV +I
Sbjct: 90 AVEIVAVAAGGMHSLAVDSCGRVWAWGCNTYGQLGIGCEMDKLHTPSLVALPADVHAQRI 149
Query: 97 ANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA--DEFVTHIACGGST 154
A G HS + G++F++G+G + QLGHS TQ++ P++++AL D + +ACG
Sbjct: 150 AAGWAHSAVILTSGEIFTFGWGLYNQLGHSTTQSELQPVIVDALQGLDSNIVQVACGNWH 209
Query: 155 SAAVTEKGKLYMWGNAKDSQL 175
+AA+TE G LY WG KD QL
Sbjct: 210 TAALTESGDLYTWGWGKDGQL 230
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
R +A G H+L LTD G+V +WG+ GQ+ + + + P ++E + +A G
Sbjct: 40 RCKAVACGSNHALVLTDSGRVVAWGWNSSGQVAAASKEMVQTPTIVEFPKAVEIVAVAAG 99
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLGV 177
G S AV G+++ WG QLG+
Sbjct: 100 GMHSLAVDSCGRVWAWGCNTYGQLGI 125
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAA--VSCGGFFTMVLTEEG 58
++ WG + G+LG+G E L PS V ALP V A ++ G + V+ G
Sbjct: 111 RVWAWGCNT-YGQLGIGC-----EMDKLHTPSLV-ALPADVHAQRIAAGWAHSAVILTSG 163
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNL--VDVRIIQIANGGYHSLALTDDGKVFSWG 116
+++ +G +LG +P ++ L +D I+Q+A G +H+ ALT+ G +++WG
Sbjct: 164 EIFTFGWGLYNQLGHSTTQSELQPVIVDALQGLDSNIVQVACGNWHTAALTESGDLYTWG 223
Query: 117 YGGHGQLGHS 126
+G GQL S
Sbjct: 224 WGKDGQLVRS 233
>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1125
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 23/194 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS--IPSKVKA--LPVPVAAVSCGGFFTMVLTE 56
+LYTWG +G LGL G G + +S IP +V V VA+++CG + T V+T
Sbjct: 381 DLYTWG--DGTHSLGL-LGHGND----ISHWIPKRVNGPLEEVRVASIACGPWHTAVVTT 433
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD-------- 108
GQL+ +G + LG DR + P+ + +L +R ++ A G +H+ A+ +
Sbjct: 434 AGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSA 493
Query: 109 ----DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
GK+F+WG G G+LGH + + VP + AL D +ACG S + A+T KG++
Sbjct: 494 SSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTVALTTKGEV 553
Query: 165 YMWGNAKDSQLGVP 178
+ G++ QLG P
Sbjct: 554 FTMGSSMFGQLGDP 567
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 12/173 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L+TWG D +GRLG G + +P+ V AL V+CG T+ LT +G+
Sbjct: 500 KLFTWG-DGDKGRLGHG------DKEQRLVPTCVAALVDHNFRKVACGHSLTVALTTKGE 552
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G++ +LG G + LVD + IA G +H +T +V++WG G
Sbjct: 553 VFTMGSSMFGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGA 612
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+G+LGH +++ P ++EAL ++ V IACG + +AAV L+ W + D
Sbjct: 613 NGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVC----LHKWLSGAD 661
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A+ + V V+CGG ++T++G+++ WG S LG G P+L+ L
Sbjct: 306 AIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEV 365
Query: 96 IANGGYHSLALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIEALADEF-VTHIACGG 152
+A G YH A+T G +++WG G H G LGH + +P + +E V IACG
Sbjct: 366 VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGP 425
Query: 153 STSAAVTEKGKLYMWGN 169
+A VT G+L+ +G+
Sbjct: 426 WHTAVVTTAGQLFTFGD 442
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L + + + + +A GG H+ +T G+VF+WG G+LGH + P ++EALA
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 359
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
+ACG AVT G LY WG+ S
Sbjct: 360 SSTTEVVACGEYHGCAVTLSGDLYTWGDGTHS 391
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 12/179 (6%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG----FFTMVLTEE 57
++WG + +G LGLG + P + AL + V +V+CGG + +TE+
Sbjct: 1 FSWGFNN-DGALGLGT------TDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQ 53
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ++ WG+ + +LG GD P+L+ L I+++A G H++ ++ G VF+WG+
Sbjct: 54 GQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGW 113
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G GQLG T N P+ + +L V +ACG + +A VTE G +Y WG + QLG
Sbjct: 114 GHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLG 172
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 100/184 (54%), Gaps = 9/184 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
++YTWG + G+LG G ++ L +P + L P+ V+CG T+V+++ G
Sbjct: 55 QVYTWGSGK-SGQLGHG------DSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGL 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG +LG G P + +L V++ ++A G H+ +T+ G V++WG+G
Sbjct: 108 VFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGV 167
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK-LYMWGNAKDSQLGVP 178
+GQLGH +Q PM ++ L +V+ +ACG + + V+E + ++ WG + QLG
Sbjct: 168 NGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHG 227
Query: 179 GLPV 182
G +
Sbjct: 228 GWDI 231
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 19/182 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG G+LG+G N+ P +V +L V V V+CG T V+TE G +
Sbjct: 108 VFAWGWGH-FGQLGVGSTHNSND------PVQVTSLDGVKVCKVACGSAHTAVVTESGHV 160
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD-DGKVFSWGYGG 119
+ WG N +LG GD +P + L + + +A G H++ +++ D VFSWG+
Sbjct: 161 YTWGWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDE 220
Query: 120 HGQLGHS----FTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
+GQLGH F N+ + P I+ L IACG S + A++ +G +Y +G KD Q
Sbjct: 221 YGQLGHGGWDIFGGNKNRSPRPIKDL-----QQIACGSSYTLALSSRGDVYAFGWGKDGQ 275
Query: 175 LG 176
LG
Sbjct: 276 LG 277
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
Query: 61 WNWGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGG----YHSLALTDDGKVFS 114
++WG N++ LG G D VG P + L + ++ +A GG HS A+T+ G+V++
Sbjct: 1 FSWGFNNDGALGLGTTDAVG--SPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYT 58
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG G GQLGH +QN +P +I L + +ACG + + V++ G ++ WG Q
Sbjct: 59 WGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQ 118
Query: 175 LGV 177
LGV
Sbjct: 119 LGV 121
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG E +G+LG G L P V+AL + V+CG + ++ +G+
Sbjct: 3134 KVFSWGEGE-DGKLGHG------NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGE 3186
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD KPK + L R+IQ+A G +LALT+DG VFSWG
Sbjct: 3187 LYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3246
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LG ++ P IE L+ V I CG S A+T G+++ WG +LG
Sbjct: 3247 GDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG 3305
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + A L P +V AL V V+CG T+ LTE+
Sbjct: 3186 ELYTWGLGE-YGRLGHG-----DNATQLK-PKQVTALAGRRVIQVACGSRDAQTLALTED 3238
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L + +IQI G SLALT G+V++WG
Sbjct: 3239 GAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGK 3298
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I L V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3299 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3357
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 90/170 (52%), Gaps = 11/170 (6%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWN 62
Y+WG E + RLG G + ++P+K+ AL V AV CG ++ +T G L+
Sbjct: 637 YSWGAGE-DHRLGHG------DTHARAVPTKISALDRCVKAVFCGCSYSAAITWSGNLYT 689
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGGH 120
WG + LG G+ P ++ L + II +A +G HSL LT +G V++WG G +
Sbjct: 690 WGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDY 749
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
G+LG+ + P+++E L V I G +S A+T +G LY WG A
Sbjct: 750 GKLGNGNCNSSLQPILVETLPR--VQRIFAGAQSSMALTTEGHLYSWGKA 797
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG RG +E G + P +++ L + V + CG F++ LT G++
Sbjct: 3241 VFSWG-DGDFGKLG----RGGSE--GSATPHEIERLSGIGVIQIECGAQFSLALTRAGEV 3293
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP+ + L R+I +A G H LA+TD G+V++WG H
Sbjct: 3294 WTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDH 3353
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P ++ L FV +ACG S S A
Sbjct: 3354 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3390
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 11/170 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG + +P ++ L V AV GG + LT +G++++WG +
Sbjct: 3090 GRLGLGVTHN------VPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED 3143
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R KP+L+ L +I +A G HS A++ G++++WG G +G+LGH
Sbjct: 3144 GKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3203
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P + ALA V +ACG + + A+TE G ++ WG+ +LG
Sbjct: 3204 ATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3253
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V AV+ GG + LT EG+++ WG + +LG G+R+ +PKL+ +L + + IA
Sbjct: 4233 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIAC 4292
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSA 156
G HS A+T G V +WG G +G+LGH +++Q P ++EAL IACG + +
Sbjct: 4293 GSAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTL 4352
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
+T+ ++ WG+ +LG
Sbjct: 4353 CITDDDNVWSWGDGDYGKLG 4372
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGY 101
+S G +++++G+++ G +N LG G P LP L V+ + + +GG
Sbjct: 3065 ISGGSKSLFIVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3124
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
H+LALT DGKVFSWG G G+LGH P ++EAL + + +ACG S SAA++ +
Sbjct: 3125 HALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQ 3184
Query: 162 GKLYMWGNAKDSQLG 176
G+LY WG + +LG
Sbjct: 3185 GELYTWGLGEYGRLG 3199
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT+ G +
Sbjct: 4360 VWSWG-DGDYGKLGRG------GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAV 4412
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L +II IA G H +A +D G+V++WG
Sbjct: 4413 YTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDE 4472
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++ AL + + + CG + + A++
Sbjct: 4473 GQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4511
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+ TWG+ GR G LG G ++ P V+AL ++CG T+ +T+
Sbjct: 4305 HVLTWGK----GRYGRLGHGDSEDQLR----PKLVEALLGYRAIDIACGSGDAQTLCITD 4356
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + +I++ G S+ALT G V++WG
Sbjct: 4357 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWG 4416
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LGH + + P + AL + + IA G A ++ G++Y WG+ + QLG
Sbjct: 4417 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG 4476
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEG 58
LYTWGR GRLG G + +P+ V AL + A+ G ++ LT EG
Sbjct: 687 LYTWGRGT-YGRLGHG------NSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEG 739
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG +LG G+ +P L+ L R+ +I G S+ALT +G ++SWG
Sbjct: 740 LVYAWGDGDYGKLGNGNCNSSLQPILVETLP--RVQRIFAGAQSSMALTTEGHLYSWGKA 797
Query: 119 ---GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GH Q+ S Q VP ++ +L + + +A G + A+T G+++ WG DSQ
Sbjct: 798 SCLGHQQVERS-VQGCSVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWGR-NDSQQ 855
Query: 176 GVPGLPVVQP 185
P +P
Sbjct: 856 ICPSSVSCEP 865
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 13/138 (9%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG- 99
V ++C ++L+++G+L+N LG+ + +P+ + L I+ IA
Sbjct: 573 VKQIACSESLLLLLSQDGKLYNC------RLGKPE----LEPQPIEELAQETILSIAGHC 622
Query: 100 -GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H LA+ + +SWG G +LGH T + VP I AL D V + CG S SAA+
Sbjct: 623 EGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISAL-DRCVKAVFCGCSYSAAI 681
Query: 159 TEKGKLYMWGNAKDSQLG 176
T G LY WG +LG
Sbjct: 682 TWSGNLYTWGRGTYGRLG 699
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 63 WGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N +LG +G +V P + +R I I+ G ++ DGKVF+ G G +
Sbjct: 3032 WGLNDKEQLGGLKGSKVK--VPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGEGTN 3089
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T N +P + L V +A GG + A+T GK++ WG +D +LG
Sbjct: 3090 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 3147
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG D G+LG G N L P V+ LP V + G +M LT EG L+
Sbjct: 741 VYAWG-DGDYGKLGNG-----NCNSSLQ-PILVETLP-RVQRIFAGAQSSMALTTEGHLY 792
Query: 62 NWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+WG S + +R G P+L+ +L R++ +A G H LALT G+VF WG
Sbjct: 793 SWGKASCLGHQQVERSVQGCSVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWGRND 852
Query: 120 HGQLGHSFTQNQ---KVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
Q+ S + ++P+++ L + IAC S S T+ +
Sbjct: 853 SQQICPSSVSCEPLLRLPILV-GLPTLPASGIACTASQSLIWTQSSQ 898
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 60 LWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG N +LG G R+ P L +R +Q+A G A+T DGK+F+ GY
Sbjct: 4148 IYGWGHNHRGQLGGLEGSRIK--TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4205
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG + + +P ++ +L FV +A GG A+T +G++Y WG +D +L
Sbjct: 4206 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4265
Query: 176 G 176
G
Sbjct: 4266 G 4266
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WGR++ G+LGLG N L +P K+KA V V ++ G T +TE G
Sbjct: 146 QVHSWGRNQ-NGQLGLG-----NNQDSL-LPQKIKAFEGVCVKMIAAGAEHTTAITEGGD 198
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG DR P+ + ++ +++ +A G HS++++ G ++++G+
Sbjct: 199 LYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSK 258
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH Q+ VP +EAL D ++ I+ G + AV E GKLY WG K Q+GV
Sbjct: 259 YGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED 318
Query: 180 LPVVQPCPVE 189
V PVE
Sbjct: 319 -NVDHCSPVE 327
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY+WG + GRLG G + + P + AL + + ++CG + +T GQ
Sbjct: 94 QLYSWGWGDF-GRLGHG------NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQ 146
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G+ P+ + V + IA G H+ A+T+ G ++ WG+G
Sbjct: 147 VHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGR 206
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG S ++ VP + ++ E + +ACG S +V+ G LY +G +K QLG
Sbjct: 207 YGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLG 263
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 93/176 (52%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTE-EGQLW 61
+WGR E +G+LG G ++ +P+ + + VP V +V CG T+ ++ E QL+
Sbjct: 44 SWGRGE-DGQLGHG------DSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLY 96
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P+ + L ++I QIA G H L +T +G+V SWG +G
Sbjct: 97 SWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNG 156
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG Q+ +P I+A V IA G + A+TE G LY WG + LG+
Sbjct: 157 QLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGL 212
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG GR G G ++ S+P KV ++ + V+CG ++ ++ G
Sbjct: 198 DLYGWGW----GRYG---NLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGA 250
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P+ L L DV I QI+ G H++A+ +DGK++ WG+
Sbjct: 251 LYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNK 310
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G + P+ + ++ + +ACG + A+TE ++ WG QLG
Sbjct: 311 FGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLG 367
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P K++AL VP++ +S G TM + E+G+L+ WG N ++G D V P +
Sbjct: 272 VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFP 331
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
+ +I+Q+A G H+LALT++ +FSWG G GQLGH ++ P +I+AL+
Sbjct: 332 DEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 25 AGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKL 84
AG ++P +A V +S G + L + +WG + +LG GD P +
Sbjct: 10 AGDEAVP---EAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTV 66
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
L + R+ + G H++A +DD +++SWG+G G+LGH + + P I AL
Sbjct: 67 LTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM 126
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ IACG S VT G+++ WG ++ QLG+
Sbjct: 127 KIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGL 160
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WGR++ G+LGLG N L +P K+ A V V ++ G T + E+G
Sbjct: 146 QVHSWGRNQ-NGQLGLG-----NTEDSL-LPQKIHAFEGVCVKMIAAGAEHTAAILEDGD 198
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + ++ +++ +A G H++ ++ G ++++G+
Sbjct: 199 LYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSK 258
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH ++ VP +EAL D F++ IA G + AV GKLY WG K Q+GV
Sbjct: 259 YGQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGV 316
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 91/177 (51%), Gaps = 10/177 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP--VAAVSCGGFFTMVLTEEG-QL 60
+WGR E +G+LG G +A +P+ + VP + V CG T ++E QL
Sbjct: 43 SWGRGE-DGQLGHG------DAEDRPVPTLLSGFDVPGIASVVICGADHTTAYSDEQMQL 95
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG LG G+ + P+ + L ++I QIA G H LA+TD G+V SWG +
Sbjct: 96 YSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQN 155
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG T++ +P I A V IA G +AA+ E G LY WG + LG+
Sbjct: 156 GQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGL 212
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY+WG + GRLG G + + P ++AL + + ++CG + +T+ GQ
Sbjct: 94 QLYSWGWGD-FGRLGHG------NSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQ 146
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G+ P+ + V + IA G H+ A+ +DG ++ WG+G
Sbjct: 147 VHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQ 206
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + ++ E + +ACG + V+ G LY +G +K QLG
Sbjct: 207 YGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLG 263
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG + G LGLG + +P KV ++ + V+CG T+ ++ G
Sbjct: 198 DLYGWGWGQ-YGNLGLG------DRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGD 250
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P L L D I QIA G H++A+ DGK++ WG+
Sbjct: 251 LYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNK 310
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G + + P+ + ++ V +ACG + A+TE ++ WG QLG
Sbjct: 311 FGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQLG 367
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL-----PNLVDVRIIQ 95
VA VS G ++ L + +WG + +LG GD P LL P + V I
Sbjct: 22 VALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVIC- 80
Query: 96 IANGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
G H+ A +D+ +++SWG+G G+LGH + + P IEAL + IACG S
Sbjct: 81 ---GADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSH 137
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
AVT+ G+++ WG ++ QLG+
Sbjct: 138 CLAVTDAGQVHSWGRNQNGQLGL 160
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQ 59
+LYT+G + G+LG G + +P K++AL + GG+ TM + +G+
Sbjct: 250 DLYTYGWSK-YGQLGHG------DFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGK 302
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG N ++G D V P + + ++ Q+A G H+LALT++ VFSWG G
Sbjct: 303 LYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGT 362
Query: 120 HGQLGHSFTQNQKVPMVIEALA 141
GQLGH ++ P +I+AL+
Sbjct: 363 SGQLGHGEIIDRNTPKMIDALS 384
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL-ADE 143
+P + + ++ G HS+AL V SWG G GQLGH +++ VP ++
Sbjct: 14 VPEAPEQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPG 73
Query: 144 FVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV-PGLPVVQPCPVE 189
+ + CG T+A E+ +LY WG +LG V P P+E
Sbjct: 74 IASVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIE 121
>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
Length = 557
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 7/182 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGR--GPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEE 57
+Y DE LGL G ++ +P KV L V ++S G G ++ TE+
Sbjct: 50 IYITADDEVYA-LGLNCSNCLGTGDSQSSIVPKKVDILSGRKVVSLSYGSGPHILLATED 108
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
G+L+ WG N +LG G G P L+ NL++ ++ ++A G +HS+ALTD G+V++WG
Sbjct: 109 GELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDSGEVYAWG 168
Query: 117 YGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
Y GQ+G T NQ P V L + I CG ++S AV + G++Y WG + QL
Sbjct: 169 YNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQL 228
Query: 176 GV 177
G+
Sbjct: 229 GL 230
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG + G +LG G G + L V V+CG +M LT+ G++
Sbjct: 110 ELFAWGHN-GYSQLG----NGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDSGEV 164
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI-IQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N+ ++G G P+ + + + R+ + I G SLA+ D+G+V+ WGY G
Sbjct: 165 YAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNG 224
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + AL V I G + S A+T++G LY WG QLG
Sbjct: 225 NGQLGLGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQLGT 282
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 93/183 (50%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVS--CGGFFTMVLTEEG 58
E+Y WG + G++G G P +V + AVS CG ++ + + G
Sbjct: 163 EVYAWGYNNC-GQVGSG------STANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNG 215
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P L L + + QI +G HSLALTD+G +++WG
Sbjct: 216 EVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTDEGLLYAWGAN 275
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P+ I + V AC + TSAA T+ G++YMWG + + +
Sbjct: 276 TYGQLGTGNKSNQLSPVQIMTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQCRGQSIVL 335
Query: 178 PGL 180
P L
Sbjct: 336 PYL 338
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T + +++ G N + LG GD PK + L +++ ++ G G H L T+DG
Sbjct: 50 IYITADDEVYALGLNCSNCLGTGDSQSSIVPKKVDILSGRKVVSLSYGSGPHILLATEDG 109
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
++F+WG+ G+ QLG+ T P+++ A L ++ VT +ACG S A+T+ G++Y WG
Sbjct: 110 ELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDSGEVYAWGY 169
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 170 NNCGQVG-SGSTANQPTP 186
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 18/200 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LYT G + G+LG G LS P+ V+AL V VSC + ++++T++ +
Sbjct: 146 KLYTCGYNN-YGQLGHG------TQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMR 198
Query: 60 --------LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK 111
+++ G N N +LG+ PK++ +L ++IQ A G +HS+ +T G+
Sbjct: 199 QASNQQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGE 258
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
VFS G+ +GQLGH+ T+++ P++IE+L ++F+ ACG + + G++Y +G
Sbjct: 259 VFSCGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRND 318
Query: 172 DSQLGVP--GLPVVQPCPVE 189
QLG+ G ++QP ++
Sbjct: 319 KGQLGIETNGQALIQPKQIQ 338
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
G LGLG + SIPS+V+ + V ++ G VLT G + G N + +
Sbjct: 50 GELGLG------DVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNGSGQ 103
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQI--ANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
LG G+ PK + +L ++RI I ANG + ++ DGK+++ GY +GQLGH
Sbjct: 104 LGHGNNKSISTPKKIESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQLGHGTQ 163
Query: 129 QNQKVPMVIEALADEFVTHIACGGSTSAAVT--------EKGKLYMWGNAKDSQLG 176
N P +++AL D VT+++C S VT ++ +Y G + QLG
Sbjct: 164 SNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQLG 219
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
V I +IA G YHS+AL + G++F++G G HGQLG T++QK+P + +L D+ V IA
Sbjct: 400 VNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVASLHDKKVIGIAG 459
Query: 151 G 151
G
Sbjct: 460 G 460
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 58/194 (29%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V +CG ++ +T G++++ G N N +LG D +P L+ +L + I+Q A G
Sbjct: 240 VIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGY 299
Query: 101 YHSLALTDDGKVFSWGYGGHGQL-----GHSFTQNQKVP--------------------- 134
YH+L D G+++++G GQL G + Q +++
Sbjct: 300 YHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSG 359
Query: 135 ---------------MVIEALADEF-----------------VTHIACGGSTSAAVTEKG 162
+++ LA+ ++ IACG S A+ E G
Sbjct: 360 QEHNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESG 419
Query: 163 KLYMWGNAKDSQLG 176
+L+ +G QLG
Sbjct: 420 QLFTFGRGNHGQLG 433
Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V ++ ++CG + ++ L E GQL+ +G ++ +LG+G+ PK + +L D ++I IA
Sbjct: 400 VNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVASLHDKKVIGIAG 459
Query: 99 GGYHSLALTDDGKV 112
G YH++ L KV
Sbjct: 460 GFYHTIVLVKQKKV 473
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WGR++ G+LGLG N L +P K+KA V V ++ G T +TE G
Sbjct: 146 QVHSWGRNQ-NGQLGLG-----NNQDSL-LPQKIKAFEGVCVKMIAAGAEHTTAITEGGD 198
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG DR P+ + ++ +++ +A G HS++++ G ++++G+
Sbjct: 199 LYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSK 258
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH Q+ VP +EAL D ++ I+ G + AV E GKLY WG K Q+GV
Sbjct: 259 YGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED 318
Query: 180 LPVVQPCPVE 189
V PVE
Sbjct: 319 -NVDHCSPVE 327
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY+WG + GRLG G + + P + AL + + ++CG + +T GQ
Sbjct: 94 QLYSWGWGDF-GRLGHG------NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQ 146
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G+ P+ + V + IA G H+ A+T+ G ++ WG+G
Sbjct: 147 VHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGR 206
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG S ++ VP + ++ E + +ACG S +V+ G LY +G +K QLG
Sbjct: 207 YGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLG 263
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTE-EGQ 59
+ +WGR E +G+LG G ++ +P+ + + VP V +V CG T+ ++ E Q
Sbjct: 42 VCSWGRGE-DGQLGHG------DSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQ 94
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L++WG LG G+ + P+ + L ++I QIA G H L +T +G+V SWG
Sbjct: 95 LYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQ 154
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG Q+ +P I+A V IA G + A+TE G LY WG + LG+
Sbjct: 155 NGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGL 212
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG GR G G ++ S+P KV ++ + V+CG ++ ++ G
Sbjct: 198 DLYGWGW----GRYG---NLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGA 250
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P+ L L DV I QI+ G H++A+ +DGK++ WG+
Sbjct: 251 LYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNK 310
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G + P+ + ++ + +ACG + A+TE ++ WG QLG
Sbjct: 311 FGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLG 367
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P K++AL VP++ +S G TM + E+G+L+ WG N ++G D V P +
Sbjct: 272 VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFP 331
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
+ +I+Q+A G H+LALT++ +FSWG G GQLGH ++ P +I+AL+
Sbjct: 332 DEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 25 AGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKL 84
AG ++P +A V +S G + L + +WG + +LG GD P +
Sbjct: 10 AGDEAVP---EAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTV 66
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
L + R+ + G H++A +DD +++SWG+G G+LGH + + P I AL
Sbjct: 67 LTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM 126
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ IACG S VT G+++ WG ++ QLG+
Sbjct: 127 KIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGL 160
>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
Length = 1199
Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+ +WG + +G+LGLG +E L P+ + +L P++ + G + + VL+ G L
Sbjct: 153 ILSWGSNT-QGQLGLGS----SEIEFLE-PTIIASLNAFPISQICAGAYHSGVLSPSGTL 206
Query: 61 WNWGANSNYELGRGDRVG-GWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N+ +LG G+ P+L+ L ++ +A G HS+ T +G VFSWG+GG
Sbjct: 207 FTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGG 266
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH+ N P I L V I CG + ++T+K KL +G ++QLG
Sbjct: 267 NGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHN 326
Query: 180 -----LPVVQP 185
LP+ P
Sbjct: 327 DTSARLPITIP 337
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/148 (34%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANG 99
V V+CG + LTEEG + +WG+N+ +LG G + +P ++ +L I QI G
Sbjct: 134 VVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAG 193
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAV 158
YHS L+ G +F+WG GQLGH + + Q P +++ L + V +A G S
Sbjct: 194 AYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCR 253
Query: 159 TEKGKLYMWGNAKDSQLGVPGLP-VVQP 185
T G ++ WG+ + QLG + V QP
Sbjct: 254 TRNGGVFSWGHGGNGQLGHNSMANVTQP 281
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYEL-GRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
V+ G FF++ + E G L+ WG + N EL + D + +PKLL ++ ++Q+A G H
Sbjct: 86 VAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDSLH--EPKLLDKIMHWSVVQVACGAQH 143
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEK 161
+ALT++G + SWG GQLG ++ + + P +I +L ++ I G S ++
Sbjct: 144 CIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPS 203
Query: 162 GKLYMWGNAKDSQLG 176
G L+ WG QLG
Sbjct: 204 GTLFTWGKNNWGQLG 218
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG+++ G+LGLG +E +S PS + A V +++ G T+ LT +++
Sbjct: 1 MYGWGKND-YGQLGLG-----SENMLISCPSPIDA-NQSVISIASGLRHTVYLTSTRKVY 53
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+ G+N +LG+ + +P L+ I +A G + S+A+ + G +F WG +G
Sbjct: 54 SCGSNEFGQLGQ--QKSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNG 111
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+L + P +++ + V +ACG A+TE+G + WG+ QLG+
Sbjct: 112 EL-MCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGL 166
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
L+TWG++ G+LG G N S P VK L V V+ G ++ T G +
Sbjct: 206 LFTWGKNNW-GQLGHG-----NSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGV 259
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG N +LG +PK + L+ + QI G H+++LTD K+ +G +
Sbjct: 260 FSWGHGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSN 319
Query: 121 GQLGHSFTQNQKVPMVIE-ALADEF-VTHIACGGSTS 155
QLG + ++P+ I +L D+ ++ IA GG S
Sbjct: 320 NQLGTHNDTSARLPITIPISLTDDRQLSCIAAGGDQS 356
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
Query: 28 LSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP 86
++ P V+AL + + CG F++VL+E G ++ WG N++ +L + P L+
Sbjct: 247 MTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVK 306
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVT 146
L + I Q+A GG H+LALT +G+V+SWG GQLG T +P ++ L +F
Sbjct: 307 ELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCA 366
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
HIACG S +TE G +Y +G QLG
Sbjct: 367 HIACGEDHSVVLTETGGVYSFGAGGQGQLG 396
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG D G+L L E + +P+ VK L +P+ ++ GG T+ LT GQ
Sbjct: 279 DVFAWG-DNTSGQLCL------RELKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQ 331
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG GD P L L IA G HS+ LT+ G V+S+G GG
Sbjct: 332 VYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGG 391
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK-GKLYMWGNAKDSQLGV 177
GQLGH QN+ P +I L + + + CG + K K+Y +G + QLG
Sbjct: 392 QGQLGHGTLQNEINPRMIFELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGT 450
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 44/212 (20%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++Y+ G ++ +G+LG R S P +V AL P + ++CG ++ LT GQ
Sbjct: 143 QVYSCGSND-QGQLGHKKHR--------SKPERVDALEPYTITQIACGETHSLALTSNGQ 193
Query: 60 LWNWGANSNYELGRG----------------------DRVGGW------------KPKLL 85
++ WG N +LG D V +P+L+
Sbjct: 194 VFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLV 253
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFV 145
L +I+QI G SL L++ G VF+WG GQL + VP +++ L +
Sbjct: 254 RALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELYGIPI 313
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG + A+T G++Y WGN + QLGV
Sbjct: 314 RQLAAGGRHTLALTFNGQVYSWGNNQFGQLGV 345
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 50/228 (21%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-------ALPVPVAAVSCGGFFTMVL 54
++ WG + +G+LGL R N+ L++P + ++ +A++CG T+ L
Sbjct: 85 VWAWG-NPTDGQLGL---RLTND-HTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFL 139
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
+ GQ+++ G+N +LG KP+ + L I QIA G HSLALT +G+VF+
Sbjct: 140 VD-GQVYSCGSNDQGQLGHKKHRS--KPERVDALEPYTITQIACGETHSLALTSNGQVFA 196
Query: 115 WGYGGHGQLGHSFTQNQK----------------------------------VPMVIEAL 140
WG QLG + +++ + P ++ AL
Sbjct: 197 WGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRAL 256
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPV 188
+ I CG + S ++E+G ++ WG+ QL + L V P P
Sbjct: 257 TGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTV-PVPT 303
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 58 GQLWNWGANSNYELG----RGDRVGGWKPKLLPNLVDVRIIQIAN----GGYHSLALTDD 109
G +W WG ++ +LG + +P L V + +A+ G H+L L D
Sbjct: 83 GSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFLVD- 141
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G+V+S G GQLGH +++ P ++AL +T IACG + S A+T G+++ WG+
Sbjct: 142 GQVYSCGSNDQGQLGHK--KHRSKPERVDALEPYTITQIACGETHSLALTSNGQVFAWGD 199
Query: 170 AKDSQLGV 177
K SQLG+
Sbjct: 200 NKASQLGL 207
>gi|218193272|gb|EEC75699.1| hypothetical protein OsI_12517 [Oryza sativa Indica Group]
Length = 555
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 26/189 (13%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
L+ WG+++G P G P+ V + VSCG M L+E+G L
Sbjct: 217 RLWVWGQNQGSDY--------PRLFWGALAPNTV------IRQVSCGAVHVMALSEDGLL 262
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPN----LVD-----VRIIQIANGGYHSLALTDDGK 111
WG N +LGRG G + + N +D V+I++++ G YH+ A++++G+
Sbjct: 263 QAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPELVKIVRVSCGEYHTAAISENGE 322
Query: 112 VFSWGYGGHGQLGHSFTQN---QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
V++WG G GQLGH Q+ + +P + AL + ++CGG S AVTE G LY WG
Sbjct: 323 VYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGGVHSCAVTEDGALYAWG 382
Query: 169 NAKDSQLGV 177
QLG+
Sbjct: 383 GGHVGQLGL 391
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNLV-------DVRIIQIAN 98
GG + + ++ WG N + + R G PK LP + ++R I +A
Sbjct: 84 GGLRVAGVPTKSAIYLWGYNHSGQTARKGKECHLRIPKSLPPKLFKWQDGKNLRWIDVAC 143
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H+ A+ DG +++WG GQLG ++ K P ++AL EFV ++CG +AAV
Sbjct: 144 GRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSVSCGAHCTAAV 203
Query: 159 TE---------KGKLYMWGNAKDS 173
E + +L++WG + S
Sbjct: 204 AEPRENNGTISRSRLWVWGQNQGS 227
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAA-VSCGGFFTMVLTEEGQ 59
E+YTWG G+LG + ++ IP +V AL V VSCGG + +TE+G
Sbjct: 322 EVYTWGLGS-MGQLGHCSLQSGDKE---LIPRRVVALDRTVIRDVSCGGVHSCAVTEDGA 377
Query: 60 LWNWGANSNYELGRGDRVGGWKPKL---------LPNLVDVRIIQIANGGY-HSLALTDD 109
L+ WG +LG G + G + L +P L+ +Q+ G+ H+L D
Sbjct: 378 LYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLIIPSGVQLVTCGHSHTLVSMKD 437
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
+++ WGY +GQ + + P ++ E V +A GG SA +T+ L
Sbjct: 438 SRIYGWGYNSYGQAANEKSTYAWFPSPVDWCVGE-VRRLAAGGGHSAVLTDACSL 491
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 72/195 (36%), Gaps = 62/195 (31%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY-- 101
V+CG T + +G L+ WGAN +LG G +P+ + L + ++ G +
Sbjct: 141 VACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSVSCGAHCT 200
Query: 102 ---------------------------------------------------HSLALTDDG 110
H +AL++DG
Sbjct: 201 AAVAEPRENNGTISRSRLWVWGQNQGSDYPRLFWGALAPNTVIRQVSCGAVHVMALSEDG 260
Query: 111 KVFSWGYGGHGQLGHSFT----QNQKVPMVIEALADEF-----VTHIACGGSTSAAVTEK 161
+ +WGY +GQLG T Q +V DE + ++CG +AA++E
Sbjct: 261 LLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPELVKIVRVSCGEYHTAAISEN 320
Query: 162 GKLYMWGNAKDSQLG 176
G++Y WG QLG
Sbjct: 321 GEVYTWGLGSMGQLG 335
>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
Length = 531
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G + L V V+CG +M L +G+L+
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + R++ IA G S+A+ D G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 96/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ ++I++A G +HS+AL DG++F+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ L + V +IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGL 215
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 6/181 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG + G++G G N+ I + + V ++CG +M + + G++
Sbjct: 148 ELFAWGYNNC-GQVG--SGSTANQPTPRKITNCLHT--KRVVNIACGQTSSMAVLDSGEV 202
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG N N +LG G+ P + L + + QI G H+LALTD+G +++WG +
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG N P I + + AC + TSAA T+ G +YMWG + + +P
Sbjct: 263 GQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 322
Query: 180 L 180
L
Sbjct: 323 L 323
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 IYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+L+ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
++ +TD+ +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 34 AIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ VQ C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVC 122
>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
Length = 527
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G + L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++ L + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD+ +VF +G LG Q+ VP +E L + + ++ G G TE
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ VQ C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVC 122
>gi|149043904|gb|EDL97355.1| rCG61079, isoform CRA_d [Rattus norvegicus]
Length = 245
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG +G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG Q Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ ++ G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG E + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----ECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKL 84
++ WG N +LG D G + +L
Sbjct: 211 IFGWGRNKFGQLGLNDENGRFSLEL 235
>gi|156546048|ref|XP_001600404.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Nasonia
vitripennis]
Length = 533
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK 111
+ LT +G++++WG N ELG G G P L NL + + IA G +HS+ALT+DG+
Sbjct: 90 LALTNKGEIYSWGHNGYCELGNGSTNQGLTPTLCLNLNEKVVTAIACGSHHSVALTEDGE 149
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
V+SWG GQ+ + NQ P V AL + V IACG ++S AVT+ G+++ WG
Sbjct: 150 VYSWGQNNCGQVSSGISSNQGAPRKVNSALTGKVVVSIACGQTSSMAVTDVGEVFGWGYN 209
Query: 171 KDSQLGVPG-LPVVQPCPV 188
QLG+ + + PC V
Sbjct: 210 GVGQLGIGNYVNQLSPCKV 228
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGP-GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + G LG G +G L++ KV V A++CG ++ LTE+G+
Sbjct: 97 EIYSWGHN-GYCELGNGSTNQGLTPTLCLNLNEKV------VTAIACGSHHSVALTEDGE 149
Query: 60 LWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG N+ ++ G P K+ L ++ IA G S+A+TD G+VF WGY
Sbjct: 150 VYSWGQNNCGQVSSGISSNQGAPRKVNSALTGKVVVSIACGQTSSMAVTDVGEVFGWGYN 209
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G GQLG NQ P + L + +ACG + + A++++G LY+WG QLG+
Sbjct: 210 GVGQLGIGNYVNQLSPCKVTGLNGIVIEKVACGYAHTLALSDEGALYVWGGNGFGQLGL 268
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 9/181 (4%)
Query: 1 ELYTWGRDE-GEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG++ G+ G+ +G ++ KV V +++CG +M +T+ G+
Sbjct: 149 EVYSWGQNNCGQVSSGISSNQGAPRKVNSALTGKV------VVSIACGQTSSMAVTDVGE 202
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG G+ V P + L + I ++A G H+LAL+D+G ++ WG G
Sbjct: 203 VFGWGYNGVGQLGIGNYVNQLSPCKVTGLNGIVIEKVACGYAHTLALSDEGALYVWGGNG 262
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG N P+ + ++ IA S A+ + GK+YMWG + +
Sbjct: 263 FGQLGLGNKANACTPIKLNVTEMGRISDIATLHYNHISVAMGQGGKIYMWGQCRGQSVTS 322
Query: 178 P 178
P
Sbjct: 323 P 323
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+++T++G ++ G+N+ LG GD PK + L I A G G H LALT+ G
Sbjct: 37 LIVTKDGDVYALGSNTAGCLGTGDSHSTLHPKKVEALCGKGIKTFAYGSGPHVLALTNKG 96
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+++SWG+ G+ +LG+ T P + L ++ VT IACG S A+TE G++Y WG
Sbjct: 97 EIYSWGHNGYCELGNGSTNQGLTPTLCLNLNEKVVTAIACGSHHSVALTEDGEVYSWGQN 156
Query: 171 KDSQL 175
Q+
Sbjct: 157 NCGQV 161
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSA 156
N G +L +T DG V++ G G LG + + P +EAL + + A G G
Sbjct: 31 NLGNEALIVTKDGDVYALGSNTAGCLGTGDSHSTLHPKKVEALCGKGIKTFAYGSGPHVL 90
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
A+T KG++Y WG+ +LG
Sbjct: 91 ALTNKGEIYSWGHNGYCELG 110
>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Homo sapiens]
Length = 531
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G + L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++ L + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
++ +L +TD+ +VF +G LG Q+ VP +E L + + ++ G
Sbjct: 23 KVCVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYG 82
Query: 152 -GSTSAAVTEKGKLYMWGNAKDSQLG----VPGLPVVQPC 186
G TE G +Y WG+ SQLG G+ VQ C
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC 122
>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Acyrthosiphon pisum]
Length = 4257
Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 22/197 (11%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
+LYTWG EG+ GRLG G + IP+ VK+L +PV V+CG T+ + +G
Sbjct: 499 QLYTWG--EGDHGRLGHG------DCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDG 550
Query: 59 Q-LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W++G+ N +LG G+ + +KP+ + L +I ++A G + S+ALT G+VF+WG
Sbjct: 551 NTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQ 610
Query: 118 GGHGQLGHS----FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
G + G S F+ P V+E L + + I+ G S A+T +Y WG+
Sbjct: 611 GSNLGCGSSEITLFS-----PAVVEDLMQQMIIDISVGDSHCLALTRNCAVYAWGSNGKG 665
Query: 174 QLGV--PGLPVVQPCPV 188
Q G PV +P V
Sbjct: 666 QCGQGHSTSPVSRPSKV 682
Score = 95.5 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 97/167 (58%), Gaps = 6/167 (3%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLGLG ++I K+K + ++ C G ++ L++ G++++WG +L
Sbjct: 403 GRLGLGNSSNQPVPKRININCKIKQVS---SSKGCDGH-SLALSDTGEVYSWGDGDYGKL 458
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGY-HSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
G GD +PKL+ ++I++ + GY HS A+T DG++++WG G HG+LGH
Sbjct: 459 GHGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNP 518
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGK-LYMWGNAKDSQLG 176
+ +P ++++L+D V ++ACG + + A + G ++ +G+ + +LG
Sbjct: 519 RFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKLG 565
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 66/192 (34%), Positives = 100/192 (52%), Gaps = 28/192 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGG--LSIPSKVKALPVPVAA-VSCGGFFTMVLTEE 57
+ Y WG G+LG + A G ++I S +K +A + CG T VLT +
Sbjct: 3393 DAYLWGNGR-NGQLG-------DTAVGQCINIWSPIKIQNFKIAQRIVCGQNCTFVLTSQ 3444
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ----------IANGGYHSLALT 107
G + + G + LG G LPNL + +Q I + G HSLALT
Sbjct: 3445 GTVLSCGEGNYGRLGHG------HSDSLPNLTMISALQGFVITQVSTSIGSDG-HSLALT 3497
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
+ G+VFSWG G G+LGH + Q+ P +IE+L D V +ACG SA +++ G++Y++
Sbjct: 3498 ETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVF 3557
Query: 168 GNAKDSQLGVPG 179
G+A+ +LG+ G
Sbjct: 3558 GSAEHGKLGLGG 3569
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 6/190 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG D G+LG G E + P K + + VS G + +T +GQL
Sbjct: 446 EVYSWG-DGDYGKLGHGDVATHKEPKLIQGPFIGKVIEL----VSAGYRHSAAVTSDGQL 500
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG + LG GD + P L+ +L D+ + +A G H+LA + DG V+S+G G
Sbjct: 501 YTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGD 560
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+G+LGH T P IE L + +A G S A+T G+++ WG + G
Sbjct: 561 NGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSNLGCGSSE 620
Query: 180 LPVVQPCPVE 189
+ + P VE
Sbjct: 621 ITLFSPAVVE 630
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 10 GEGRLG-LGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGG-FFTMVLTEEGQLWNWG 64
GEG G LG G PN L++ S ++ + + S G ++ LTE G++++WG
Sbjct: 3451 GEGNYGRLGHGHSDSLPN----LTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSWG 3506
Query: 65 ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
+LG G+ KPKL+ +L DV +IQ+A G HS L+ DG+V+ +G HG+LG
Sbjct: 3507 DGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLG 3566
Query: 125 HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
N+K P I + +IACG + + + E ++ +G + +LG+
Sbjct: 3567 LGGHINKKRPTKIVHKGFLNIKYIACGQNHTICIGEN-VVWAFGEGEGGKLGI 3618
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 16/165 (9%)
Query: 1 ELYTWGRDEGEG-RLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEG 58
E W EGEG +LG+G + + +P ++ L + CG FTM L+E+G
Sbjct: 3602 ENVVWAFGEGEGGKLGIGSKKD------IYVPQEIITLNGKNIKKAYCGNGFTMFLSEDG 3655
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLV----DVRIIQIANGGYHSLALTDDGKVFS 114
+L++ G+++ L V + KL+P + + +A G H L LT G V++
Sbjct: 3656 ELYSCGSDN---LQDATDVL-YTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWA 3711
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
WG G LG + PM+I+ L+D+ + IA + AA T
Sbjct: 3712 WGNNCEGILGFGHDLPVQKPMIIQILSDKNIKQIATSRTHCAAWT 3756
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG+NS+ + G P+L+ +L DV+ Q+ G Y + + G V + G
Sbjct: 343 EVFMWGSNSSNQHAEGATEVTDIPRLVRSLSDVQ--QVEAGQYCTFIIDTKGCVSACGKN 400
Query: 119 GHGQLGHSFTQNQKVP--MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + NQ VP + I + + C G S A+++ G++Y WG+ +LG
Sbjct: 401 SYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDGH-SLALSDTGEVYSWGDGDYGKLG 459
Score = 36.6 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
E++TWG+ G G G +E S P+ V+ L + +S G + LT
Sbjct: 604 EVFTWGQ-------GSNLGCGSSEITLFS-PAVVEDLMQQMIIDISVGDSHCLALTRNCA 655
Query: 60 LWNWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALT 107
++ WG+N + G+G +P + NL +I QI+ G HS+A T
Sbjct: 656 VYAWGSNGKGQCGQGHSTSPVSRPSKVINLEGKQINQISAGTSHSVAWT 704
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG G KP+ + L D II +A G
Sbjct: 95 VKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKE--GSKPEQIGALADQHIIHVACGE 152
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG + T++ VP +I+ L E + ++CG A+
Sbjct: 153 SHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALA 212
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 213 ADGQFFAWGQNSHGQLGL 230
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
L++WG +G+LGL +++P +K L + VSCG + + L +GQ
Sbjct: 163 RLFSWGAG-SDGQLGLT-----TTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQ 216
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 217 FFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKN 276
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S Q+++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 277 TSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLG 334
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ + WG++ G+LGLG P++A P +VK+L +P+A V+ GG + L+ G
Sbjct: 216 QFFAWGQN-SHGQLGLGK-EFPSQAS----PQRVKSLDGIPLAQVAAGGAHSFALSLSGA 269
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N++ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 270 VFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGS 329
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
GQLGH ++ P + L V+ IACG T A V G +Y +G QLG
Sbjct: 330 CGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLG 387
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 98/183 (53%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L+++G+
Sbjct: 113 EVYTCGVN-TKGQLGHEKEGSKPEQIGALADQH--------IIHVACGESHSLALSDQGR 163
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 164 LFSWGAGSDGQLGLTTTEDSVA--VPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWG 221
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P +++L + +A GG+ S A++ G ++ WG Q
Sbjct: 222 QNSHGQLGLGKEFP-SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQ 280
Query: 175 LGV 177
LG+
Sbjct: 281 LGL 283
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 270 VFGWGKNTS-GQLGLSDEQDRES------PCHVKLLRTQKVVYISCGSDHTAVLTKTGGV 322
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 323 FTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGI 382
Query: 120 HGQLGHSFTQNQKVP 134
GQLG T N K P
Sbjct: 383 KGQLGSGHTCNLKCP 397
>gi|414870472|tpg|DAA49029.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 469
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 32/186 (17%)
Query: 22 PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
P + +S P +V+ L V ++ G F + LTE+G LW WG N +LG GD
Sbjct: 232 PGDIKQISTPVRVQGLE-KVRVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSH 290
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDG------------------------------K 111
P + L D+ ++ IA GG+HS ALT G K
Sbjct: 291 PIRVEGLSDLSLVDIAAGGWHSTALTIQGEINSLPCYLFRACFKDVQIIKYQKYTYYTMK 350
Query: 112 VFSWGYGGHGQLGHSFTQNQK-VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
V++WG G HG+LG ++ + VP+ +E LA E + ++CGG+ S A+T G+++ +G
Sbjct: 351 VYAWGRGEHGRLGFGDDKSSRMVPLKVELLAGEDIVQVSCGGTHSVALTRDGRMFSYGRG 410
Query: 171 KDSQLG 176
+LG
Sbjct: 411 DHGRLG 416
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 84/156 (53%), Gaps = 9/156 (5%)
Query: 12 GRLGLGPGRGPNEAGGL--SIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
G+ G P R + L IP+ + P + V V+ GG ++VLT+EG +W WG
Sbjct: 172 GQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVWTWGQ--- 228
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
GD P + L VR+I + G +H+LALT+DG +++WG +GQLG T
Sbjct: 229 -PWPPGDIKQISTPVRVQGLEKVRVIAV--GAFHNLALTEDGILWAWGNNEYGQLGTGDT 285
Query: 129 QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
Q + P+ +E L+D + IA GG S A+T +G++
Sbjct: 286 QPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEI 321
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANG 99
V AV G ++ + E+G+L+ WG N LG + P + L ++I+Q A G
Sbjct: 79 VTAVVAGSRNSLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIG 138
Query: 100 GYHSLALTDDGKVFSWGYGG------------HGQLGH--------SFTQNQKVPMVIEA 139
G+H LA+ D+G ++WG G +GQ G + + +P
Sbjct: 139 GWHCLAVDDNGHAYAWGRGTRFPAFSVTGGNEYGQCGEEPERKEDGTRALRRDIPTPQRC 198
Query: 140 LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V +A GG+ S +T++G ++ WG
Sbjct: 199 APKLKVRQVAAGGTHSVVLTQEGHVWTWGQ 228
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 60/205 (29%)
Query: 2 LYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
L+ WG +E G+LG G P P GLS S V ++ GG+ + LT +G
Sbjct: 269 LWAWGNNE-YGQLGTGDTQPRSHPIRVEGLSDLSLVD--------IAAGGWHSTALTIQG 319
Query: 59 QL------------------------------WNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ + WG + LG GD +++P
Sbjct: 320 EINSLPCYLFRACFKDVQIIKYQKYTYYTMKVYAWGRGEHGRLGFGDDK---SSRMVPLK 376
Query: 89 VDV----RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF 144
V++ I+Q++ GG HS+ALT DG++FS+G G HG+LG+ PM ++
Sbjct: 377 VELLAGEDIVQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKLTTGQPMGVDIDLPPP 436
Query: 145 VT-----------HIACGGSTSAAV 158
T ++ACGG + A+
Sbjct: 437 KTRSSRDGQWQAKYVACGGRHTLAI 461
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 90/217 (41%), Gaps = 46/217 (21%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
L+TWG ++ G LG P + S P V AL + + + GG+ + + + G
Sbjct: 97 RLFTWGWNQ-RGTLG-----HPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGH 150
Query: 60 LWNWGANSNY---------ELG-------------RGDRVGGWKPKLLPNLVDVRIIQIA 97
+ WG + + E G R R P+ + VR Q+A
Sbjct: 151 AYAWGRGTRFPAFSVTGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVR--QVA 208
Query: 98 NGGYHSLALTDDGKVFSWGY----GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
GG HS+ LT +G V++WG G Q+ P+ ++ L E V IA G
Sbjct: 209 AGGTHSVVLTQEGHVWTWGQPWPPGDIKQI--------STPVRVQGL--EKVRVIAVGAF 258
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGV-PGLPVVQPCPVE 189
+ A+TE G L+ WGN + QLG P P VE
Sbjct: 259 HNLALTEDGILWAWGNNEYGQLGTGDTQPRSHPIRVE 295
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 33/76 (43%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V G G GQLG + + +EAL VT + G S A+ E G+L+ WG +
Sbjct: 46 VLYRGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWGWNQ 105
Query: 172 DSQLGVPGLPVVQPCP 187
LG P + P
Sbjct: 106 RGTLGHPPKTKTESSP 121
>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
troglodytes]
gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Chronic lymphocytic leukemia deletion region gene 7
protein; Short=CLL deletion region gene 7 protein;
AltName: Full=Regulator of chromosome condensation and
BTB domain-containing protein 1
gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [synthetic construct]
gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 531
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G + L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++ L + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 15/186 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
EL+TWG+++ G+LG G G + + P +++ P+ V CGG ++ + +
Sbjct: 1238 ELFTWGKNQ-SGQLGHGLDIGKIQ----TTPKRLEFFRGKSPIIMVECGGEHSICVDSDY 1292
Query: 59 QLWNWGANSNYELGRGDR-VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+++WG + +LG G + V +PK++ ++ +I IA G H++ L G+++S+GY
Sbjct: 1293 VVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGELYSFGY 1352
Query: 118 GGHGQLGHSFTQNQKVPMVIE-------ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
G GQLGH ++ +P IE +T IACG S ++ G++Y WG
Sbjct: 1353 GDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLG 1412
Query: 171 KDSQLG 176
K QLG
Sbjct: 1413 KQGQLG 1418
Score = 86.7 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 24/187 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG+D+ G+LG G ++ + P ++ + + A++ G T+VL + G+L
Sbjct: 1294 VYSWGQDKF-GQLGHG-----TKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGEL 1347
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDV-----------RIIQIANGGYHSLALTDD 109
+++G +LG G V K +P +++ +I QIA G HS+ +D+
Sbjct: 1348 YSFGYGDQGQLGHGSFVS----KSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDN 1403
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G+V+SWG G GQLGH ++ P +IEAL VT I+CG + A T+ +Y WG
Sbjct: 1404 GEVYSWGLGKQGQLGHGNYESIARPRLIEALKG--VTKISCGHFYTMATTDLKNVYSWGL 1461
Query: 170 AKDSQLG 176
+ +LG
Sbjct: 1462 GEHMKLG 1468
Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 12/141 (8%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV-----RIIQIAN 98
VSCG +++E G+L+ WG N + +LG G +G K + P ++ II +
Sbjct: 1223 VSCGWDHVALISESGELFTWGKNQSGQLGHGLDIG--KIQTTPKRLEFFRGKSPIIMVEC 1280
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGH---SFTQNQKVPMVIEALADEFVTHIACGGSTS 155
GG HS+ + D V+SWG GQLGH S +QN+ P +IE ++ + + IA G + +
Sbjct: 1281 GGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNR--PKIIEDISGQKIQAIAAGFAHT 1338
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
+ + G+LY +G QLG
Sbjct: 1339 IVLKKSGELYSFGYGDQGQLG 1359
Score = 79.0 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 91/172 (52%), Gaps = 17/172 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV--------PVAAVSCGGFFTM 52
ELY++G + +G+LG G SIP++++ + + ++CG ++
Sbjct: 1346 ELYSFGYGD-QGQLGHGSFVSK------SIPTRIELNTIVGIQHGGGKITQIACGFGHSV 1398
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
+ ++ G++++WG +LG G+ +P+L+ L V +I+ G ++++A TD V
Sbjct: 1399 ICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGV--TKISCGHFYTMATTDLKNV 1456
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
+SWG G H +LGH +N+ P V++ + V+ I CG + + +T G L
Sbjct: 1457 YSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDL 1508
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 92/234 (39%), Gaps = 66/234 (28%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG + +G+LG G ++ P ++AL V +SCG F+TM T+ +
Sbjct: 1405 EVYSWGLGK-QGQLGHG------NYESIARPRLIEALK-GVTKISCGHFYTMATTDLKNV 1456
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK--------- 111
++WG + +LG G P+++ + + +I G H++ LT G
Sbjct: 1457 YSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSND 1516
Query: 112 --------------------------------------------VFSWGYGGHGQLG--- 124
+++ G G HG+LG
Sbjct: 1517 DDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGG 1576
Query: 125 --HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
S ++ +P I+ + + I+CG +A +T G LY+WG Q+G
Sbjct: 1577 DLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYVWGYGNFGQIG 1630
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT--QNQKVPMVIEAL-ADEFVTHI 148
R I+++ G H +++ G++F+WG GQLGH + Q P +E + +
Sbjct: 1219 RAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMV 1278
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
CGG S V +Y WG K QLG
Sbjct: 1279 ECGGEHSICVDSDYVVYSWGQDKFGQLG 1306
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 17/93 (18%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAV--------SCGGFFTMV 53
+Y G E G+LGLG G L P K +P + V SCG FT +
Sbjct: 1561 IYACGAGE-HGKLGLG--------GDLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAM 1611
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP 86
+T G L+ WG + ++G G W P +P
Sbjct: 1612 ITSNGALYVWGYGNFGQIGNGKTDDAWVPIRIP 1644
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 54 LTEEGQ---LWNWGANSNYELGRG-DRVGGWKPKLLPNLVD----VRIIQIANGGYHSLA 105
L E Q ++ GA + +LG G D + K +P + + +I I+ G +
Sbjct: 1552 LNENSQVSPIYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAM 1611
Query: 106 LTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
+T +G ++ WGYG GQ+G+ T + VP+ I
Sbjct: 1612 ITSNGALYVWGYGNFGQIGNGKTDDAWVPIRI 1643
>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
Length = 393
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 103/184 (55%), Gaps = 16/184 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+YTWG ++ +G+LG +E + +P +V A+P V A+S G + T+ + E G +W
Sbjct: 58 VYTWGLND-KGQLGH-----DSEDSEVGLPGEV-AMPERVVALSAGYYHTLCVGESGSVW 110
Query: 62 NWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++G N +LG G D V +P+L+ +L D +++ +A G HSLALT G+V+SWG +
Sbjct: 111 SFGCNGKGQLGLGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAAN 170
Query: 121 GQLGHSFTQNQK--------VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
G+LGH ++ +P ++ A V ++ G SAAV+ G ++WG K
Sbjct: 171 GRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKF 230
Query: 173 SQLG 176
QLG
Sbjct: 231 HQLG 234
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 13/154 (8%)
Query: 30 IPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR---GDRVGGWKPKLL 85
+P V+AL VP+ AV+CGG T + + G ++ WG N +LG VG L
Sbjct: 27 LPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLNDKGQLGHDSEDSEVG------L 80
Query: 86 PNLVDV--RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALAD 142
P V + R++ ++ G YH+L + + G V+S+G G GQLG + P ++++L D
Sbjct: 81 PGEVAMPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQD 140
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V +A G S A+T G++Y WGNA + +LG
Sbjct: 141 NKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLG 174
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 10 GEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
G+G+LGLG + + P VK+L V AV+ G ++ LT G++++WG +N
Sbjct: 116 GKGQLGLG-----KDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAAN 170
Query: 69 YELGRGD----RVGGWKPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
LG G R+ G + LP LV +R+ Q++ G HS A++ G F WGYG
Sbjct: 171 GRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKF 230
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG ++ P V+ L +ACG S A+ G + WG ++ LG
Sbjct: 231 HQLGFGSDEDLAGPTVLPPLKGSTAA-VACGSLHSLALQYGGHVLAWGTNQNGVLG 285
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSI---PSKVKAL-PVPVAAVSCGGFFTMVLTE 56
E+Y+WG + GRLG G P G SI P V+A + V VS G + ++
Sbjct: 161 EVYSWG-NAANGRLGHGSAT-PRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVST 218
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
G + WG ++LG G P +LP L +A G HSLAL G V +WG
Sbjct: 219 AGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLKG-STAAVACGSLHSLALQYGGHVLAWG 277
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G LG H Q K P + ++ E IA G SAAVT GKLY WG
Sbjct: 278 TNQNGVLGQGHEKQQQPKRPSKVPGVSAE---QIAAGWKHSAAVTGSGKLYTWG 328
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 28 LSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN 87
L+ P+ + L AAV+CG ++ L G + WG N N LG+G +PK
Sbjct: 241 LAGPTVLPPLKGSTAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGHEKQ-QQPKRPSK 299
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH--------------GQLGHSFTQNQKV 133
+ V QIA G HS A+T GK+++WG+GG GQLGH +
Sbjct: 300 VPGVSAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTGTGGQLGHGNDFDYWS 359
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTE 160
P ++ L+ +ACG + +AA+ E
Sbjct: 360 PHHVDWLSLTETDLVACGMNHTAAIVE 386
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
P+++ L+ V + +A GG H+ A+ D G V++WG GQLGH +++ +V + E
Sbjct: 28 PRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLNDKGQLGHD-SEDSEVGLPGEVAM 86
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
E V ++ G + V E G ++ +G QLG+
Sbjct: 87 PERVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGL 122
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 10/76 (13%)
Query: 114 SWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG---- 168
++G G G+LGHS ++++P V+ AL + +ACGG+ +AAV + G +Y WG
Sbjct: 7 TFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLNDK 66
Query: 169 -----NAKDSQLGVPG 179
+++DS++G+PG
Sbjct: 67 GQLGHDSEDSEVGLPG 82
>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_b [Mus musculus]
Length = 563
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G + L V V+CG +M L +G+L+
Sbjct: 128 VYAWGHN-GYSQLG----NGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELF 182
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + R++ IA G S+A+ D G+V+ WGY G+
Sbjct: 183 AWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGN 242
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 243 GQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 299
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 96/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 87 GTGDNQS--TLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTT 144
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ ++I++A G +HS+AL DG++F+WGY GQ+G T NQ P
Sbjct: 145 NQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPR 204
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V +IACG ++S AV + G++Y WG + QLG+
Sbjct: 205 KVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGL 247
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
EL+ WG + G++G G P KV V ++CG +M + + G
Sbjct: 180 ELFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSG 232
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L + + QI G H+LALTD+G +++WG
Sbjct: 233 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGAN 292
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + + AC + TSAA T+ G +YMWG + + +
Sbjct: 293 TYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 352
Query: 178 PGL 180
P L
Sbjct: 353 PHL 355
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 67 IYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDG 126
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+L+ WG
Sbjct: 127 VVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGY 186
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 187 NNCGQVG-SGSTANQPTP 203
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
++ +TD+ +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 66 AIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTED 125
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ VQ C
Sbjct: 126 GVVYAWGHNGYSQLGNGTTNQGIAPVQVC 154
>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1626
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 64/179 (35%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP--VAAVSCGGFFTMVLTEEGQ 59
LYTWG +E G+LG RG +P V A+P + A+ G V+ G
Sbjct: 204 LYTWGNNEF-GQLG----RGDCGDDFTCLPESV-AVPGAKRLVALDAGASRAAVIDSSGA 257
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG + LG GD ++P L+ +L ++ +A GG HSLALT G++FSWG G
Sbjct: 258 LFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGE 317
Query: 120 HGQLGHSFTQNQKV-PMVIEALAD-EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH Q+Q++ P ++ D + I+ GG S A + G +Y WG + LG
Sbjct: 318 NGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILG 376
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 63/181 (34%), Positives = 95/181 (52%), Gaps = 14/181 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
L+TWGR + GRLG G + P+ V +L V AV+ GG ++ LT+ G+L
Sbjct: 258 LFTWGRGD-HGRLGHGDTENRYQ------PTLVSSLYGHVVVAVALGGGHSLALTKAGEL 310
Query: 61 WNWGANSNYELGRGD-RVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYG 118
++WG N +LG G + PK L VD+ +II I+ GGYHS+A DDG V++WG
Sbjct: 311 FSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMS 370
Query: 119 GHGQLGHSFTQNQKVPM---VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+G LG + + + + ++ F T I+CG + A+T +Y WG +L
Sbjct: 371 DYGILGTGDSDDGAINIPQRILMPRGIRFKT-ISCGFQHTVALTSDNTIYSWGCGLGGRL 429
Query: 176 G 176
G
Sbjct: 430 G 430
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 83 KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD 142
KL P + RII + G H ++ GK+F+WG G +G+LGH ++ P + ALA+
Sbjct: 124 KLYP---EERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALAN 180
Query: 143 EFVTHIACGGSTSAAV--TEKGKLYMWGNAKDSQLG 176
+ ++ CGG ++ A+ T LY WGN + QLG
Sbjct: 181 IPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLG 216
Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 14/141 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVP-VAAVSCGGFFTMVLTEEG 58
EL++WGR E G+LG G + A P +++ + +P + +S GG+ ++ ++G
Sbjct: 309 ELFSWGRGE-NGQLGHGSYQSQQLA-----PKQLQFFVDMPKIIGISAGGYHSVAQLDDG 362
Query: 59 QLWNWGANSNYELGRGDRVGGW----KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
++ WG + LG GD G + L+P +R I+ G H++ALT D ++S
Sbjct: 363 SVYAWGMSDYGILGTGDSDDGAINIPQRILMPR--GIRFKTISCGFQHTVALTSDNTIYS 420
Query: 115 WGYGGHGQLGHSFTQNQKVPM 135
WG G G+LG +NQ P+
Sbjct: 421 WGCGLGGRLGTFNEKNQCAPI 441
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
V+ G ++++ G+L+ WG LG GD PK + L ++ + + GG +
Sbjct: 134 VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRST 193
Query: 104 LAL--TDDGKVFSWGYGGHGQLGH-----SFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
+AL T +++WG GQLG FT +P + + + + G S +A
Sbjct: 194 IALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTC---LPESVAVPGAKRLVALDAGASRAA 250
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
+ G L+ WG +LG
Sbjct: 251 VIDSSGALFTWGRGDHGRLG 270
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 10/177 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
LY +G ++ G+LGLG + N+ PS VK L P V V+CG T+V +E G+L
Sbjct: 59 LYVFGSNDW-GQLGLGHTKSLNK------PSFVKPLKPEKVRKVACGRNHTIVYSESGKL 111
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+++G N + +LG D+ PK + ++ + I QIA G YHS+ L++DG V+ WG
Sbjct: 112 FSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNE 171
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +P ++ + V ++CG +A VT G LY +G + +LG+
Sbjct: 172 GQLGLGEEVENSLPKKLKFKKE--VVSVSCGYYHTALVTRDGFLYTFGENELGKLGL 226
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/137 (34%), Positives = 79/137 (57%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V ++CG + V+TE G+L+ +G+N +LG G KP + L ++ ++A G
Sbjct: 40 VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGR 99
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
H++ ++ GK+FS+G GQLGH +N+ +P IE++ + IACG S ++E
Sbjct: 100 NHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIILSE 159
Query: 161 KGKLYMWGNAKDSQLGV 177
G +Y+WGN + QLG+
Sbjct: 160 DGDVYVWGNNNEGQLGL 176
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 20/184 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG + EG+LGLG E S+P K+K V +VSCG + T ++T +G L
Sbjct: 162 DVYVWGNNN-EGQLGLG------EEVENSLPKKLK-FKKEVVSVSCGYYHTALVTRDGFL 213
Query: 61 WNWGANSNYELGR-GDRVGGWKPKLLPNLVDV-----RIIQIANGGYHSLALTDDGKVFS 114
+ +G N ELG+ G +P V + I ++ G H++A+T G ++
Sbjct: 214 YTFGEN---ELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYA 270
Query: 115 WGYGGHGQLGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
WG G GQLGH T+ +V P I+ L+ + ++CG S +A VTE GK++ +G+ +
Sbjct: 271 WGDGSQGQLGHG-TKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRH 329
Query: 173 SQLG 176
+LG
Sbjct: 330 GKLG 333
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 14/158 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV---PVAAVSCGGFFTMVLTEEG 58
LYT+G +E G+LGL + N ++P V A+P +VSCG T+ +T++G
Sbjct: 213 LYTFGENE-LGKLGLSSSQLSNT----TVPQSV-AMPADNDEYISVSCGARHTVAITKQG 266
Query: 59 QLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+ WG S +LG G ++ +PK + L + I ++ G H+ +T+ GKVF++G
Sbjct: 267 HCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGD 326
Query: 118 GGHGQLGH---SFTQNQKVPMVIEALADEFVTHIACGG 152
G HG+LG SF+ N P+ + V +++CGG
Sbjct: 327 GRHGKLGQGEDSFS-NSFDPVYLSRFNYFNVVYVSCGG 363
Score = 36.2 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 140 LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++ V +ACG SA VTE G+LY++G+ QLG+
Sbjct: 35 IKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGL 72
>gi|395770833|ref|ZP_10451348.1| hypothetical protein Saci8_13710 [Streptomyces acidiscabies 84-104]
Length = 393
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 98/176 (55%), Gaps = 13/176 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAG-GLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG D G+LG N G ++P +V+ +P +S G F++ L E G+
Sbjct: 137 QVYSWG-DNSYGQLG------NNRTGDSRTVPDRVQGMP-KAKQISAGCDFSLALLENGK 188
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG + +LG G+R P+ + L D I++I G YH+LA+T D V SWGY
Sbjct: 189 VYAWGRGIHGQLGTGNRATSSVPRQVTGLED--IVKIDAGCYHALAITADNTVKSWGYNL 246
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+GQLG+S T++ VP+ ++ L D V+ I G + A+T +Y WGN + QL
Sbjct: 247 YGQLGNSATKSSTVPVDVDWLTD--VSDIEAGAWHNYAMTSDSHVYGWGNNQYGQL 300
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 10 GEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAA--VSCGGFFTMVLTEEGQLWNWGAN 66
G GR G LG G + S+ S + ++A S FT+ T++ + WG N
Sbjct: 36 GAGRTGQLGNGTLSDSLSPASVTSLFRGDVDQMSAGGTSSADSFTLARTDK-TVKAWGHN 94
Query: 67 SNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS 126
S +LG G P +P L +V+ IA GG H+LAL G+V+SWG +GQLG++
Sbjct: 95 SAGQLGNGGNTNQAVPTTVPRLTNVK--DIAAGGKHALALDTSGQVYSWGDNSYGQLGNN 152
Query: 127 FT-QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
T ++ VP ++ + I+ G S A+ E GK+Y WG QLG
Sbjct: 153 RTGDSRTVPDRVQGMPK--AKQISAGCDFSLALLENGKVYAWGRGIHGQLGT 202
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 21/184 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WGR G+LG G N A S+P +V L + + G + + +T + +
Sbjct: 188 KVYAWGRGI-HGQLGTG-----NRATS-SVPRQVTGLE-DIVKIDAGCYHALAITADNTV 239
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+WG N +LG P + L DV I+ G +H+ A+T D V+ WG +
Sbjct: 240 KSWGYNLYGQLGNSATKSSTVPVDVDWLTDVSDIEA--GAWHNYAMTSDSHVYGWGNNQY 297
Query: 121 GQL-------GHSFTQ-NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
GQL G + ++ N+ P+ I L E V H+A G AVT ++ WGN +
Sbjct: 298 GQLLEGDQADGDNISRTNRTAPVEIPRL--EGVQHLAAGARHGVAVTAD-DVFTWGNNSE 354
Query: 173 SQLG 176
QLG
Sbjct: 355 GQLG 358
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS-----LALTDDGKVFSWG 116
+WGA +LG G P + +L + Q++ GG S LA TD V +WG
Sbjct: 34 SWGAGRTGQLGNGTLSDSLSPASVTSLFRGDVDQMSAGGTSSADSFTLARTDK-TVKAWG 92
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ GQLG+ NQ VP + L + V IA GG + A+ G++Y WG+ QLG
Sbjct: 93 HNSAGQLGNGGNTNQAVPTTVPRLTN--VKDIAAGGKHALALDTSGQVYSWGDNSYGQLG 150
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 15/139 (10%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGG--------W 80
++P V L V+ + G + +T + ++ WG N +L GD+ G
Sbjct: 259 TVPVDVDWL-TDVSDIEAGAWHNYAMTSDSHVYGWGNNQYGQLLEGDQADGDNISRTNRT 317
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ--KVPMVIE 138
P +P L V+ +A G H +A+T D VF+WG GQLG+ T ++ V ++ E
Sbjct: 318 APVEIPRLEGVQ--HLAAGARHGVAVTAD-DVFTWGNNSEGQLGNGTTVSRFDSVKILQE 374
Query: 139 ALADEFVTHIACGGSTSAA 157
A + VT + GG+T+ A
Sbjct: 375 GSAIKNVT-ASLGGNTTYA 392
>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
Length = 685
Score = 95.5 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 18/202 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
ELYTWG +G +GL G G IP ++ +PVA VSCG + T ++T G
Sbjct: 149 ELYTWG--DGTHNVGL---LGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTALITSMG 203
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
QL+ +G S LG G+ PK + +L ++ I +A G +H+ A+ +
Sbjct: 204 QLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSV 263
Query: 109 -DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
GK+F+WG G +LGH +++ P + +L D +ACG S + +T GK+
Sbjct: 264 SAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSM 323
Query: 168 GNAKDSQLGVPGLPVVQPCPVE 189
GN+ QLG P PC VE
Sbjct: 324 GNSVYGQLGNPNSDGRLPCLVE 345
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 61/177 (34%), Positives = 91/177 (51%), Gaps = 20/177 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+TWG D + RLG G ++ L + V+CG T+ LT G++
Sbjct: 267 KLFTWG-DGDKHRLGHG-----DKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKV 320
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI-----IQIANGGYHSLALTDDGKVFSW 115
+ G + +LG + G LP LV+ RI +Q+A G YH LT +VF+W
Sbjct: 321 LSMGNSVYGQLGNPNSDG-----RLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTW 375
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
G G +G+LGH +++KVP +EAL D V HIACG + +AA+ L+ W + D
Sbjct: 376 GKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAIC----LHKWVSGAD 428
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G +S P +V++L + AV+CG + T + E
Sbjct: 204 QLFTFG-DGSFGVLGHG------NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIV 256
Query: 57 --------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+L+ WG + LG GD+ KP + +L+D ++A G ++ LT
Sbjct: 257 THSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTT 316
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GKV S G +GQLG+ + + +V + +A E V +ACG A +T + +++ WG
Sbjct: 317 SGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWG 376
Query: 169 NAKDSQLG 176
+ +LG
Sbjct: 377 KGANGRLG 384
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 7/195 (3%)
Query: 1 ELYTWGRD--EGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEE 57
++Y WG E R+G E +P +++ L + V V CG ++T
Sbjct: 36 DVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRN 95
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG +S LG G R P+L+ +L + +A G +H+ A+T G++++WG
Sbjct: 96 GDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGD 155
Query: 118 GGH--GQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G H G LGH +P I D V +++CG +A +T G+L+ +G+
Sbjct: 156 GTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGV 215
Query: 175 LGVPGLPVVQPCPVE 189
LG L + CP E
Sbjct: 216 LGHGNLTSIS-CPKE 229
>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 1
gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Mus musculus]
Length = 531
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G + L V V+CG +M L +G+L+
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + R++ IA G S+A+ D G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 96/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ ++I++A G +HS+AL DG++F+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V +IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGL 215
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
EL+ WG + G++G G P KV V ++CG +M + + G
Sbjct: 148 ELFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L + + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + + AC + TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 IYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+L+ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
++ +TD+ +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 34 AIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ VQ C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVC 122
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 95/181 (52%), Gaps = 14/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF--FTMVLT 55
ELYTWG E GRLG G P P + LS V V+CG T+ LT
Sbjct: 2811 ELYTWGSGE-YGRLGHGDNVPQLKPKQVRALSHER--------VVQVACGSRDAQTLALT 2861
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
E +++WG +LG+G G P+ + L ++IQ+ G SLAL+ +GKV++W
Sbjct: 2862 ERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTW 2921
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G + +LGH + + P V+E LAD+ V ++ G AVT++G++Y WG+ Q
Sbjct: 2922 GKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQ 2981
Query: 176 G 176
G
Sbjct: 2982 G 2982
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 10/162 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG G G S+P V+ L V V CG F++ L++ G++
Sbjct: 2866 VYSWG-DGDFGKLGKGGSDGS------SLPQNVETLNSQQVIQVECGAQFSLALSKNGKV 2918
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G P+++ L D +IQ++ G H +A+TD G+V++WG H
Sbjct: 2919 WTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDH 2978
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
GQ G+ T + P ++ L E +T++ACG S S A + G
Sbjct: 2979 GQQGNGNTTVNRKPAIVRGL--EAITNVACGSSHSVAWSSTG 3018
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 5/167 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLGLG + L+ + + AV GG + LT +G++++WG + +L
Sbjct: 2715 GRLGLGHSHNVAQPKPLT---DLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKL 2771
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G G+++ +PKL+ +L RI +A G HS A+T G++++WG G +G+LGH Q
Sbjct: 2772 GHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVPQ 2831
Query: 132 KVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
P + AL+ E V +ACG + + A+TE+ +Y WG+ +LG
Sbjct: 2832 LKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLG 2878
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 87/155 (56%), Gaps = 5/155 (3%)
Query: 27 GLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+S P+ ++ L V AV+ GG + LT G +++WG + +LG G + +PK
Sbjct: 3691 SVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPK 3750
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
L+ +L D ++ +A GG HS +T G++++WG G +G+LGH +++Q P +E LA
Sbjct: 3751 LIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGH 3810
Query: 144 FVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
V +ACG + + V+ G ++ WG+ +LG
Sbjct: 3811 NVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLG 3845
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 96/181 (53%), Gaps = 13/181 (7%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
ELYTWG+ GR G LG G ++ P KV+ L V V+CG T+ ++
Sbjct: 3778 ELYTWGK----GRYGRLGHGDSEDQLK----PKKVEELAGHNVLDVACGSGDAQTLCVSR 3829
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+G +W+WG +LGRG G P+ + +L + +I++ G S+ALT G V++WG
Sbjct: 3830 DGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWG 3889
Query: 117 YGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G + +LGH + + P ++ AL + V +A G A T+ G+++ WG+ + QL
Sbjct: 3890 KGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQL 3949
Query: 176 G 176
G
Sbjct: 3950 G 3950
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 18/186 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G P K+ +L V V CG F++ LT G +
Sbjct: 3833 VWSWG-DGDYGKLGRGG------SDGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVV 3885
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG + LG G +P+ + L R+IQ+A G H +A TD G+VF+WG
Sbjct: 3886 YTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDND 3945
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG T + P ++ +L + + +ACG + + + W +K + V
Sbjct: 3946 EGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAHTVS---------WSTSKSAHKTVTQ 3996
Query: 180 LPVVQP 185
LP P
Sbjct: 3997 LPTQIP 4002
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 57 EGQLWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
E +++ WG N +LG +G ++ +PK + +++ + IA G ++ DGKVF+
Sbjct: 2651 ECKVFVWGLNDKDQLGGLKGSKIK--EPKFSEVISNLKPMNIAGGSKSLFIVSHDGKVFA 2708
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKD 172
G G +G+LG + N P + L+ F+ +A GG + A+T G+++ WG +D
Sbjct: 2709 CGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGED 2768
Query: 173 SQLG 176
+LG
Sbjct: 2769 GKLG 2772
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G + WG N +LG + + L +R +QI G ALT DGKV++ GY
Sbjct: 3619 GVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATGY 3678
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P +IE L VT +A GG A+T G ++ WG D +L
Sbjct: 3679 GAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKL 3738
Query: 176 G 176
G
Sbjct: 3739 G 3739
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 4/162 (2%)
Query: 18 PGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR 76
PG PN G ++ P + V V+CGG ++ L E+G+++ GAN+ +LG +R
Sbjct: 12 PGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLGH-ER 70
Query: 77 VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPM 135
G KP+ + L D I+ +A G HSLAL+D G++FSWG G GQLG T++ VP
Sbjct: 71 EGN-KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPR 129
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+I+ L + + ++CG A+ G+ + WG QLG+
Sbjct: 130 LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGL 171
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+ GG HS AL+ G VF WG
Sbjct: 158 FFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 97/192 (50%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWGR+ G+LGLG P++A P +V++L +P+A V GG + L+ G
Sbjct: 157 QFFTWGRN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVVAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L+++GQ
Sbjct: 54 EVYTCGAN-TKGQLGHEREGNKPEQIGALADQH--------IVHVACGESHSLALSDQGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + + GG+ S A++ G ++ WG Q
Sbjct: 163 RNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA 149
GQLG T N K P ++ A AD F HI
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIV 364
>gi|390333856|ref|XP_788386.3| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Strongylocentrotus purpuratus]
Length = 782
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 76/128 (59%)
Query: 49 FFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
FF +V+TE G+L+ +GAN +LG G R KP + L +++IA G H++ALT
Sbjct: 40 FFDVVITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTK 99
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
D + S+G GG GQLG ++ + P +IE L ++ ++CG SAA+T G LYMWG
Sbjct: 100 DRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDYLLLSCGTDHSAALTASGTLYMWG 159
Query: 169 NAKDSQLG 176
+ QLG
Sbjct: 160 GGSEGQLG 167
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
LY +G ++ G+LGLG + N+ PS VK L V ++CG T+ LT++ L
Sbjct: 51 LYVFGANDW-GQLGLGHRKSVNK------PSSVKGLKHAGVVKIACGRVHTIALTKDRHL 103
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++GA +LG GD P+++ L + + ++ G HS ALT G ++ WG G
Sbjct: 104 HSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDYLLLSCGTDHSAALTASGTLYMWGGGSE 163
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
GQLGH ++P + V ++CG +A +TE KLY +
Sbjct: 164 GQLGHGEDTEVQIPRELSMGVP--VRMVSCGYYHTALLTEDKKLYTF 208
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 10/177 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LY WG EG+LG G E + IP ++ ++ VPV VSCG + T +LTE+ +L+
Sbjct: 155 LYMWGGG-SEGQLGHG------EDTEVQIPREL-SMGVPVRMVSCGYYHTALLTEDKKLY 206
Query: 62 NWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+G +LG G+ +GG + + ++ G H+ A+T+ G V+++G G
Sbjct: 207 TFGEGEGGKLGLGEAHLGGVNEPQHVSFFTEPVDSVSCGNAHTAAITEKGHVYTFGNGAS 266
Query: 121 GQLGHSFTQ-NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLGH +P + L ++CG +A VT KG LY +G+ + +LG
Sbjct: 267 GQLGHGPDHLETNIPKRVARLEWTRCKWVSCGDCHTAIVTAKGCLYTFGDGRHGKLG 323
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 26 GGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DRVGGWKPKL 84
GG++ P V PV +VSCG T +TE+G ++ +G ++ +LG G D + PK
Sbjct: 224 GGVNEPQHVSFFTEPVDSVSCGNAHTAAITEKGHVYTFGNGASGQLGHGPDHLETNIPKR 283
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH---SFTQNQKVPMVIEALA 141
+ L R ++ G H+ +T G ++++G G HG+LG SF+ N P +
Sbjct: 284 VARLEWTRCKWVSCGDCHTAIVTAKGCLYTFGDGRHGKLGQGEESFS-NVFTPSKVHRFN 342
Query: 142 DEFVTHIACGG 152
V ++CGG
Sbjct: 343 GFLVEEVSCGG 353
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
+ + +T++G+++ +G GQLG ++ P ++ L V IACG + A+T+
Sbjct: 40 FFDVVITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTK 99
Query: 161 KGKLYMWGNAKDSQLGV 177
L+ +G + QLGV
Sbjct: 100 DRHLHSFGAGGEGQLGV 116
>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
carolinensis]
Length = 530
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 96/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K+++L + ++S G G ++ TE+G+++ WG N +LG G
Sbjct: 54 GTGDNQST--IVPKKLESLSGKRIRSLSYGSGPHVVLSTEDGEVYAWGHNGYSQLGNGTT 111
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ ++I++A G +HSLAL+ DG V++WGY GQ+G T NQ P
Sbjct: 112 NQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQPTPR 171
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S A+ + G++Y WG + QLG+
Sbjct: 172 KVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGNGQLGL 214
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 6/179 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG + G++G G +S + K V +++CG ++ + + G++
Sbjct: 147 DVYAWGYNNC-GQVGSGSTANQPTPRKVSNCLQTKI----VVSIACGQTSSVAIVDNGEV 201
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG N N +LG G+ P + L V I+QIA G H+LALTD+G ++SWG +
Sbjct: 202 YGWGYNGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTY 261
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLG NQ P I + V AC TSAA T+ G +YMWG + + +P
Sbjct: 262 GQLGTGNKSNQLSPGQILMEKERVVEIAACHSAHTSAAKTQSGLVYMWGQCRGQSVVLP 320
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T +++ +G N + LG GD PK L +L RI ++ G G H + T+DG
Sbjct: 34 IYITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLESLSGKRIRSLSYGSGPHVVLSTEDG 93
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+V++WG+ G+ QLG+ T P+ V L + V +ACG S A++ G +Y WG
Sbjct: 94 EVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGY 153
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 154 NNCGQVG-SGSTANQPTP 170
>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1080
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 94/177 (53%), Gaps = 6/177 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++YTWG++ G+LGLG +S P V++L +PV VS GG + L+ G
Sbjct: 142 QVYTWGQN-SRGQLGLGK----EGCSSISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGS 196
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG GD P L+ L + + A G H+ LT DG VF++G G
Sbjct: 197 VFGWGRNDCGQLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGH 256
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ +N P ++ L VT IACG + +T+ K+Y +G + QLG
Sbjct: 257 YGQLGHNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLG 313
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 3/149 (2%)
Query: 31 PSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR--VGGWKPKLLPN 87
P ++AL + V V+CG T+VL+++GQ++ WG NS +LG G P+ + +
Sbjct: 113 PRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRS 172
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
L + ++Q++ GG HS AL+ G VF WG GQLG T +++ P ++ L +
Sbjct: 173 LSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMKKTVF 232
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
ACG +A +T G ++ +G+ QLG
Sbjct: 233 AACGKDHTAVLTMDGTVFTFGSGHYGQLG 261
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGLG + P+ V L + +CG T VLT +G +
Sbjct: 197 VFGWGRNDC-GQLGLG------DTTDRETPTLVHYLNMKKTVFAACGKDHTAVLTMDGTV 249
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ +G+ +LG P+L+ L ++ +IA G YH+L LTD KV+S+G H
Sbjct: 250 FTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEH 309
Query: 121 GQLGHSFTQNQKVPMVIEALAD-EFVTHIACGGSTSAAV 158
GQLG + VP+ ++ + + +I GG +S A
Sbjct: 310 GQLGPREETHPCVPLPVQLPREGPIIQNIFAGGDSSFAT 348
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 80 WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ--LGHSFTQNQKVPMVI 137
+ P+ L L + + Q+A G H++ L+ DG+V++WG GQ LG + P +
Sbjct: 111 FTPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV 170
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+L+ V ++ GG S A++ G ++ WG QLG+
Sbjct: 171 RSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGL 210
>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
Length = 892
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
Query: 27 GLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR-VGGWKPKL 84
L +P ++A +PV+ V+CG T+ LT+EGQ++ WG NS +LG G + P+
Sbjct: 104 ALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQC 163
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF 144
+ +L + ++Q++ GG HS AL+ G VF WG GQLG +Q++ P +++L +
Sbjct: 164 VRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKK 223
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
T I+CG +A +T+ G ++ +G+ + QLG
Sbjct: 224 TTSISCGKDHTAILTKHGTVFTFGSGQFGQLG 255
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 101/194 (52%), Gaps = 16/194 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++YTWG++ G+LGLG + +S P V++L +P+ VS GG + L+ G
Sbjct: 137 QVYTWGQN-SRGQLGLG-----KKGCSISSPQCVRSLSGMPLVQVSAGGDHSFALSVSGS 190
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG GD P + +L + I+ G H+ LT G VF++G G
Sbjct: 191 VFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQ 250
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG--- 176
GQLGH+ ++N+ P ++ L VT IACG + + E K+Y +G +QLG
Sbjct: 251 FGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENNKIYSFGCNDQNQLGRSN 310
Query: 177 -----VPGLPVVQP 185
VP LPV+ P
Sbjct: 311 DSHPSVP-LPVLLP 323
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 128 TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
TQ +P ++EA V+ +ACG + A+T++G++Y WG QLG+
Sbjct: 102 TQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGL 151
>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
Length = 526
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 5/173 (2%)
Query: 21 GPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVG 78
G +A + P ++ L + ++S G G +++T +G++++WG N+ +LG G
Sbjct: 54 GTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQ 113
Query: 79 GWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM-V 136
P ++ NL++ + I +A G +HS+ LT DG+V++WGY GQ+G T NQ +P V
Sbjct: 114 ALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKV 173
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
L ++ V IACG +S AV + G++Y WG + QLG+ G QP P
Sbjct: 174 TSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL-GSSGNQPTPCR 225
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E+Y WG + G++G G IP KV + V ++CG +M + + G
Sbjct: 147 EVYAWGYNNS-GQVGSG------STANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNG 199
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ Q+ G H+LALTD+G +++WG
Sbjct: 200 EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGAN 259
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P+ + + V AC S TSAA ++ G++YMWG + +
Sbjct: 260 SYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCRGQSVIT 319
Query: 178 PGL 180
P L
Sbjct: 320 PHL 322
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ LT+ +++ G NS+ LG GD +P+ + L RI+ ++ G G H + +T DG
Sbjct: 34 LYLTKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDG 93
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+V+SWG+ + QLG+ T P + L ++ +ACG S +T G++Y WG
Sbjct: 94 EVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGY 153
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 154 NNSGQVG-SGSTANQPIP 170
>gi|403303318|ref|XP_003942281.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 531
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 90/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGVAPIQVCTNLLIKKVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHFKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++ L + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGVAPIQVCTNLLIKKVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHFKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V ++CG +M + + G+++ WG N N +LG G+ P + L V + QI G
Sbjct: 183 VVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGY 242
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVT 159
H+LALTD+G +++WG +GQLG N P I + V AC TSAA T
Sbjct: 243 AHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPAHIMVEKERVVEIAACHSAHTSAAKT 302
Query: 160 EKGKLYMWGNAKDSQLGVPGL 180
+ G +YMWG + + +P L
Sbjct: 303 QGGHVYMWGQCRGQSVILPHL 323
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T++ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKKVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 11/119 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
E+Y WG + G G+LGLG G P +V AL V V + CG T+ LT+EG
Sbjct: 201 EVYGWGYN-GNGQLGLGNN------GNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGL 253
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWG 116
L+ WGAN+ +LG G++ P + + R+++IA + + S A T G V+ WG
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLNPAHIM-VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TDD +VF +G LG Q+ VP +E L + + ++ G G TE
Sbjct: 34 ALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG 176
G +Y WG+ SQLG
Sbjct: 94 GVVYAWGHNGYSQLG 108
>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_a [Mus musculus]
Length = 531
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G + L V V+CG +M L +G+L+
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + R++ IA G S+A+ D G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 96/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ ++I++A G +HS+AL DG++F+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V +IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGL 215
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
EL+ WG + G++G G P KV V ++CG +M + + G
Sbjct: 148 ELFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L + + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + + AC + TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 IYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+L+ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
++ +TD+ +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 34 AIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ VQ C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVC 122
>gi|328791214|ref|XP_625074.3| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
mellifera]
Length = 502
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 93/182 (51%), Gaps = 14/182 (7%)
Query: 21 GPNEAGGLSI--------PSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYE 70
G N +G L I P K+K L + + G G + LTEEG++++WG N +YE
Sbjct: 49 GSNTSGCLGIGDTQSTLYPKKIKELCGKDIKTFAYGKGPHVLALTEEGKVYSWGQNCHYE 108
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG--HSFT 128
LG P ++ NL + II IA G +HSLALT+DG+V++WG GQ+G T
Sbjct: 109 LGNTFNNQALTPGIITNLCNEFIIDIACGSHHSLALTNDGEVYAWGQNTSGQVGCHDDTT 168
Query: 129 QNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP-GLPVVQPC 186
Q +P + L + V I+CG S S VT G++Y WG QLG+ PC
Sbjct: 169 LVQDIPRKLNFTLTGKKVICISCGDSFSVVVTNNGEVYSWGCNDVGQLGIENNNDQFHPC 228
Query: 187 PV 188
+
Sbjct: 229 KI 230
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+++T++ ++ G+N++ LG GD PK + L I A G G H LALT++G
Sbjct: 37 LIVTKDKMVYAVGSNTSGCLGIGDTQSTLYPKKIKELCGKDIKTFAYGKGPHVLALTEEG 96
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
KV+SWG H +LG++F P +I L +EF+ IACG S A+T G++Y WG
Sbjct: 97 KVYSWGQNCHYELGNTFNNQALTPGIITNLCNEFIIDIACGSHHSLALTNDGEVYAWGQN 156
Query: 171 KDSQLGV-PGLPVVQPCP 187
Q+G +VQ P
Sbjct: 157 TSGQVGCHDDTTLVQDIP 174
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 84/154 (54%), Gaps = 5/154 (3%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR---VGGWKPKLLPNLVDVRIIQIA 97
+ ++CG ++ LT +G+++ WG N++ ++G D V KL L ++I I+
Sbjct: 131 IIDIACGSHHSLALTNDGEVYAWGQNTSGQVGCHDDTTLVQDIPRKLNFTLTGKKVICIS 190
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
G S+ +T++G+V+SWG GQLG +Q P I +LA + + CG + A
Sbjct: 191 CGDSFSVVVTNNGEVYSWGCNDVGQLGIENNNDQFHPCKITSLAKIVIEKVVCGSIHTLA 250
Query: 158 VTEKGKLYMWGNAKDSQLGVPG--LPVVQPCPVE 189
++++G LY+WG+ QLG+ L + +P +E
Sbjct: 251 LSDEGVLYVWGDNNYGQLGLTTVLLNIWKPTKLE 284
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV--PVAAVSCGGFFTMVLTEEG 58
E+Y WG++ G++G + IP K+ V +SCG F++V+T G
Sbjct: 149 EVYAWGQNTS-GQVGCHDDTTLVQ----DIPRKLNFTLTGKKVICISCGDSFSVVVTNNG 203
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++++WG N +LG + + P + +L + I ++ G H+LAL+D+G ++ WG
Sbjct: 204 EVYSWGCNDVGQLGIENNNDQFHPCKITSLAKIVIEKVVCGSIHTLALSDEGVLYVWGDN 263
Query: 119 GHGQLG 124
+GQLG
Sbjct: 264 NYGQLG 269
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + GRLG G + L P +KAL + + ++CG + +T EG+
Sbjct: 88 EVYSWGWGD-FGRLGHG------NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 140
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG GD P+ + +RI +A G H+ A+T+DG ++ WG+G
Sbjct: 141 VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGR 200
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + + E ++ +ACG + +V+ G LY +G +K QLG
Sbjct: 201 YGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLG 257
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 104/190 (54%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG + +P K++A + + V+ G T +TE+G
Sbjct: 140 EVQSWGRNQ-NGQLGLG------DTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 192
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + + ++ +A G H+++++ G ++++G+
Sbjct: 193 LYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSK 252
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH ++ VP +EAL + ++ I+ G + A+T GKLY WG K Q+GV G
Sbjct: 253 YGQLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-G 311
Query: 180 LPVVQPCPVE 189
+ Q PV+
Sbjct: 312 NNLDQCSPVQ 321
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 94/176 (53%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEG-QLW 61
+WGR E +G+LG G +A P+++ AL + +V+CG T+ +E +++
Sbjct: 38 SWGRGE-DGQLGHG------DAEDRLSPTQLSALDDHQIVSVTCGADHTVAYSESRMEVY 90
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P + L +RI QIA G H LA+T +G+V SWG +G
Sbjct: 91 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNG 150
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+A + +A G +AAVTE G LY WG + LG+
Sbjct: 151 QLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 206
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + +P +V A ++ V+CG T+ ++ G
Sbjct: 192 DLYGWGWGR-YGNLGLG------DRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGA 244
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P L L + I QI+ G H++ALT DGK++ WG+
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNK 304
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G +Q P+ + D+ V ++CG + AVTE+ ++ WG + QLG+
Sbjct: 305 FGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGI 362
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
+ +V P V +S G ++ L + +WG + +LG GD P L L
Sbjct: 6 VADEVTPPPRRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALD 65
Query: 90 DVRIIQIANGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
D +I+ + G H++A ++ +V+SWG+G G+LGH + + P+ I+AL + I
Sbjct: 66 DHQIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQI 125
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
ACG S AVT +G++ WG ++ QLG+
Sbjct: 126 ACGDSHCLAVTMEGEVQSWGRNQNGQLGL 154
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P K++AL V + GG+ TM LT +G+L+ WG N ++G G+ + P +
Sbjct: 266 VPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIP 325
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
D +++Q++ G H+LA+T+ VF+WG G +GQLG + ++ P +IEAL+
Sbjct: 326 DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKIIEALS 378
>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
Length = 526
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 5/173 (2%)
Query: 21 GPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVG 78
G +A + P ++ L + ++S G G +++T +G++++WG N+ +LG G
Sbjct: 54 GTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQ 113
Query: 79 GWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM-V 136
P ++ NL++ + I +A G +HS+ LT DG+V++WGY GQ+G T NQ +P V
Sbjct: 114 ALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKV 173
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
L ++ V IACG +S AV + G++Y WG + QLG+ G QP P
Sbjct: 174 TSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL-GSSGNQPTPCR 225
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E+Y WG + G++G G IP KV + V ++CG +M + + G
Sbjct: 147 EVYAWGYNNS-GQVGSG------STANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNG 199
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ Q+ G H+LALTD+G +++WG
Sbjct: 200 EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGAN 259
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P+ + + V AC S TSAA ++ G++YMWG + +
Sbjct: 260 SYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCRGQSVIT 319
Query: 178 PGL 180
P L
Sbjct: 320 PHL 322
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ LT+ +++ G NS+ LG GD +P+ + L RI+ ++ G G H + +T DG
Sbjct: 34 LYLTKNDEVFVMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDG 93
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+V+SWG+ + QLG+ T P + L ++ +ACG S +T G++Y WG
Sbjct: 94 EVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGY 153
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 154 NNSGQVG-SGSTANQPIP 170
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG + +G+LGLG P V +L VP+A V+CGG+ T+V+++ G
Sbjct: 157 ELYAWGSN-SDGQLGLGSDTKMELK-----PKLVHSLAAVPIAFVACGGYHTIVISKSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + R+ A G S+ LT DG VF+ G G
Sbjct: 211 VFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGM 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH ++ +P I L VT I+CG T A V +G++Y WG QLG
Sbjct: 271 YGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 103/183 (56%), Gaps = 12/183 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y+ G ++ G+LG GR L + S + P+ +CG T+V+ E GQL
Sbjct: 54 QVYSCGNND-HGQLGQEKGRK-----RLQLISGID--PLAFRKAACGSSHTLVVNEWGQL 105
Query: 61 WNWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++WG+N +LG DRV +P+++ L I+QIA G HS+ALT++G++++WG
Sbjct: 106 FSWGSNVEGQLGL-DRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSN 164
Query: 119 GHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG S T+ + P ++ +LA + +ACGG + +++ G ++ WG QLG+
Sbjct: 165 SDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGL 224
Query: 178 PGL 180
+
Sbjct: 225 SDI 227
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG G LGLG N + P +V + ++CG +T+ +T+EGQ+
Sbjct: 1 MFCWG-STIHGELGLGGIEDEN----IFTPREVNFEKANEIEQIACGDNYTIAVTKEGQV 55
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++ G N + +LG+ G + +L+ + + + A G H+L + + G++FSWG
Sbjct: 56 YSCGNNDHGQLGQEK--GRKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVE 113
Query: 121 GQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + + P +++ L + + IACG S A+T G+LY WG+ D QLG+
Sbjct: 114 GQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGL 171
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LGL + N +P +++ L V +CG F++ LT +G +
Sbjct: 211 VFAWGRNTF-GQLGLSDIQNRN------VPCQLRTLRNSRVCYAACGEEFSVFLTMDGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA +LG G++ P+ + L+ + QI+ G H+LAL G+V++WG GG
Sbjct: 264 FTCGAGMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG+ QN P V+
Sbjct: 324 AGQLGNRIAQNSTTPQVV 341
>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
Length = 1413
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 63/179 (35%), Positives = 108/179 (60%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LY WG D EG++GLG E+ L+ P +V ++ V VSCG + + +T +G L+
Sbjct: 162 LYMWG-DNSEGQIGLG-----KESNALT-PQEV-SVGKRVFWVSCGYYHSAFVTVDGALY 213
Query: 62 NWGANSNYELG-RGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G + +LG +++ K P+ + ++ D R++Q+A GG H++ALT++ +V+S+G G
Sbjct: 214 TFGEKDSGKLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVALTEN-EVYSFGLGQ 271
Query: 120 HGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH +F ++P V+E V H ACG + +A +T+ G LY +G+ + +LG+
Sbjct: 272 FGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGL 330
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 1/135 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
+SCG T ++TE G+L+ +G+N+ +LG G + KP + L R+ A G H+
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKG 162
L T G +++ G GQLG ++ ++E + + +A G +TSAA+T+ G
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDG 160
Query: 163 KLYMWGNAKDSQLGV 177
+LYMWG+ + Q+G+
Sbjct: 161 RLYMWGDNSEGQIGL 175
Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 11/155 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LYT+G ++ G+LGL + N +P +V +P V V+CGG T+ LTE +++
Sbjct: 212 LYTFG-EKDSGKLGLSTEKLANH----KVPQQVTDIPDRVVQVACGGGHTVALTEN-EVY 265
Query: 62 NWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++G +LG G + + P+++ + R+ A G H+ +TD+G ++++G G H
Sbjct: 266 SFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRH 325
Query: 121 GQLG---HSFTQNQKVPMVIEALADEFVTHIACGG 152
G+LG +FT NQ P + D V + CGG
Sbjct: 326 GKLGLGEENFT-NQFKPTLCPRFLDYHVHSVTCGG 359
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/172 (33%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
G+LGLG N+ P+ VKAL V +CG T+V T G L+ G N+ +
Sbjct: 66 GQLGLGTKTTVNK------PTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQ 119
Query: 71 LGRGDRVGGWKPKLLPNLVDV-----RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH 125
LG GD + +LV+ I +A G S ALT DG+++ WG GQ+G
Sbjct: 120 LGLGD----CNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGL 175
Query: 126 SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
N P E + V ++CG SA VT G LY +G +LG+
Sbjct: 176 GKESNALTPQ--EVSVGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGL 225
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 44/84 (52%)
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
++I+ G H+ +T++GK+F +G GQLG P ++AL E V ACG +
Sbjct: 39 LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRT 98
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGV 177
+ T +G LY G + QLG+
Sbjct: 99 HTLVFTSRGNLYACGGNNEGQLGL 122
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIAN 98
V +CG T ++T+ G L+ +G + +LG G+ +KP L P +D + +
Sbjct: 298 VKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTC 357
Query: 99 GGYHSLAL 106
GG H L L
Sbjct: 358 GGCHMLVL 365
>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
terrestris]
Length = 539
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 31 PSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN- 87
P K++AL V + G G + LTEEG++++WG N ELG G P L+P+
Sbjct: 70 PKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNRSTNEGLTPTLIPSA 129
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALAD-EF 144
L + ++ IA GG+HSLALT+ G+V++WG+ GQ+ G + Q +P ++ + + +
Sbjct: 130 LNNEFVVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGTILSTVQPIPKLLHIVLNGKK 189
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V HI+CG S+S AVT+ G++Y WG+ QLG+
Sbjct: 190 VVHISCGDSSSVAVTDNGEVYSWGHNGVGQLGI 222
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 79/140 (56%), Gaps = 3/140 (2%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDD 109
T+++T++ ++ G N+ LG GD PK + L + A G G H LALT++
Sbjct: 39 TLIVTKDDMVYGIGNNTYGCLGTGDTHSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEE 98
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVI-EALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GKV+SWGY + +LG+ T P +I AL +EFV IACGG S A+T KG++Y WG
Sbjct: 99 GKVYSWGYNDYCELGNRSTNEGLTPTLIPSALNNEFVVDIACGGHHSLALTNKGEVYAWG 158
Query: 169 NAKDSQLGV-PGLPVVQPCP 187
+ Q+G L VQP P
Sbjct: 159 HNVSGQVGCGTILSTVQPIP 178
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 102/185 (55%), Gaps = 18/185 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS---IPSKVKALPVPVAAVSCGGFFTMVLTEE 57
++Y+WG ++ LG R NE GL+ IPS + V ++CGG ++ LT +
Sbjct: 100 KVYSWGYND-YCELG---NRSTNE--GLTPTLIPSALN--NEFVVDIACGGHHSLALTNK 151
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV-----RIIQIANGGYHSLALTDDGKV 112
G+++ WG N + ++G G + +P +P L+ + +++ I+ G S+A+TD+G+V
Sbjct: 152 GEVYAWGHNVSGQVGCGTILSTVQP--IPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEV 209
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+SWG+ G GQLG +Q P + A + + CG + A++++G LY+WG
Sbjct: 210 YSWGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSY 269
Query: 173 SQLGV 177
QLG+
Sbjct: 270 GQLGL 274
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV---------PVAAVSCGGFFT 51
E+Y WG + G++G G +I S V+ +P V +SCG +
Sbjct: 153 EVYAWGHNVS-GQVGCG-----------TILSTVQPIPKLLHIVLNGKKVVHISCGDSSS 200
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK 111
+ +T+ G++++WG N +LG G+ +P+ + + I ++ G H+LAL+D+G
Sbjct: 201 VAVTDNGEVYSWGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGD 260
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG--GSTSAAVTEKGKLYMWGN 169
++ WG +GQLG + N +P ++ + IA S A++E +++MWG
Sbjct: 261 LYVWGANSYGQLGLNTDSNVWIPTKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWGQ 320
Query: 170 AKDSQLGVPGL 180
+ VP L
Sbjct: 321 CLGQSIKVPTL 331
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + EG+LG+G P ++ L VP+A ++CGG+ T+V+++ G
Sbjct: 157 ELYSWGSNR-EGQLGIGSHTVTEIK-----PKRIITLAAVPIAFIACGGYHTVVISKSGV 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + ++ A G S+ LT DG VF+ G G
Sbjct: 211 VFAWGRNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGM 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH N+ +P + L VT I+CG T A V +G++Y WG QLG
Sbjct: 271 YGQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALPVPVAAVSCGGFFTMVLTEEGQL 60
++ WG G LGLG N + +P +V A V ++CG +T+ +T +GQ+
Sbjct: 1 MFCWG-STIHGELGLGGIEDEN----IFMPRQVDFAKANEVEQIACGENYTVTITNDGQV 55
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++ G N +LG + +L+P L +IA G H+LA+ + G++FSWG
Sbjct: 56 YSCGNNDYGQLGHEK--ARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMK 113
Query: 121 GQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG +S ++ P +++AL + IACG S A+T G+LY WG+ ++ QLG+
Sbjct: 114 GQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGS 173
Query: 180 LPVVQPCP 187
V + P
Sbjct: 174 HTVTEIKP 181
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 2/136 (1%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYH 102
++CG T+ + E GQL++WG N +LG P+++ L I+QIA G H
Sbjct: 89 IACGSCHTLAVNEWGQLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEH 148
Query: 103 SLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
S+ALT+DG+++SWG GQLG S T + P I LA + IACGG + +++
Sbjct: 149 SIALTNDGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKS 208
Query: 162 GKLYMWGNAKDSQLGV 177
G ++ WG QLG+
Sbjct: 209 GVVFAWGRNTFGQLGL 224
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WGR+ G+LGL N+ +P +++ L V +CG F++ LT +G +
Sbjct: 211 VFAWGRNTF-GQLGL------NDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA +LG G+ + P+ + L+ + QI+ G H+LAL G+V++WG GG
Sbjct: 264 FTCGAGMYGQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG+ +++ P+V+
Sbjct: 324 AGQLGNRASRSATTPLVV 341
>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
africana]
Length = 1018
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 100/181 (55%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G + N P KVKAL + + VSCG + ++ L+++GQ
Sbjct: 93 RVFAWGAG-SEGQLGIGEFKELN-----FTPMKVKALAGIKIIQVSCGHYHSLALSQDGQ 146
Query: 60 LWNWGANSNYELGRGDR-VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS+ +LG G + P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 147 VFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSN 206
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G++ P I AL + V +I+CG +A +T+ GK++ +G+ QL
Sbjct: 207 NAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQL 266
Query: 176 G 176
G
Sbjct: 267 G 267
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 89/153 (58%), Gaps = 5/153 (3%)
Query: 31 PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNL 88
P ++AL + V +SCG ++ + +G+++ WGA S +LG G+ + + P + L
Sbjct: 64 PGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKAL 123
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ--LGHSFTQNQKVPMVIEALADEFVT 146
++IIQ++ G YHSLAL+ DG+VFSWG HGQ LG F +Q+ P +++L +
Sbjct: 124 AGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFL-SQESPQRVKSLEGIPLA 182
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A GG+ S A++ G + WG+ QL + G
Sbjct: 183 QVAAGGAHSFALSLSGTSFGWGSNNAGQLALSG 215
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 11/156 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG + G+LGLG E+ P +VK+L +P+A V+ GG + L+ G
Sbjct: 146 QVFSWG-NNSHGQLGLGKEFLSQES-----PQRVKSLEGIPLAQVAAGGAHSFALSLSGT 199
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+N+ +L G V +KP+ + L ++ ++ I+ G H+ LT DGKVF++G
Sbjct: 200 SFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFG 259
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
GQLGH T ++ P ++E + D V+ I CG
Sbjct: 260 DNSSGQLGHGPTAEKRGPQLVEGI-DGLVSQIDCGS 294
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L +G + G NS +LGR +P L+ L + + ++ G HSLA+ G
Sbjct: 33 SLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLSCGKEHSLAVCHKG 92
Query: 111 KVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + PM ++ALA + ++CG S A+++ G+++ WGN
Sbjct: 93 RVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGN 152
Query: 170 AKDSQLGVPGLPVVQPCP 187
QLG+ + Q P
Sbjct: 153 NSHGQLGLGKEFLSQESP 170
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%)
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
Q A+G HSL L DG V + G GQLG ++K P +I+AL V ++CG
Sbjct: 25 QAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLSCGKEH 84
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
S AV KG+++ WG + QLG+
Sbjct: 85 SLAVCHKGRVFAWGAGSEGQLGI 107
>gi|405950964|gb|EKC18916.1| RCC1 and BTB domain-containing protein 1 [Crassostrea gigas]
Length = 531
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 98/187 (52%), Gaps = 18/187 (9%)
Query: 1 ELYTWGRDE-GEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEE 57
E++ WG++ G+ +G G N+ P KV A+ +++CG +M L E
Sbjct: 148 EIFAWGQNNCGQ----VGSGSTTNQP----TPRKVVAVIGNKMALSIACGQTSSMALLEN 199
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ V P + L V I Q+ G H+LAL+D+G +FSWG
Sbjct: 200 GEVYGWGYNGNGQLGLGNNVNQPNPCRVQQLQGVIISQLVCGYAHTLALSDEGSLFSWGA 259
Query: 118 GGHGQLGHSFTQNQ----KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
+GQLG NQ KVPM E + + +H A SAA++E GK++MWG +
Sbjct: 260 NSYGQLGTGNKANQVSPSKVPMNGERMVEIAASHYA---HISAAMSETGKVFMWGQCRGQ 316
Query: 174 QLGVPGL 180
L P L
Sbjct: 317 SLTSPML 323
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y G + LGLG E + + K K + + + G + +++ G++
Sbjct: 42 EVYAIGSN-CSSCLGLGDAHSSFEPRKVDVLCKKKIVDIAFGS----GPHVLAVSKNGEM 96
Query: 61 WNWGANSNYELGRGDRVGGWKPKLL-PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG N +LG G G P L+ NL +I+++A G +HS+AL+ +G++F+WG
Sbjct: 97 YSWGHNGYCQLGNGGSGQGLTPTLINTNLQGKKILRVACGSHHSMALSQEGEIFAWGQNN 156
Query: 120 HGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G T NQ P V+ + ++ IACG ++S A+ E G++Y WG + QLG+
Sbjct: 157 CGQVGSGSTTNQPTPRKVVAVIGNKMALSIACGQTSSMALLENGEVYGWGYNGNGQLGL- 215
Query: 179 GLPVVQPCPVE 189
G V QP P
Sbjct: 216 GNNVNQPNPCR 226
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T + +++ G+N + LG GD ++P+ + L +I+ IA G G H LA++ +G
Sbjct: 35 IYITNDDEVYAIGSNCSSCLGLGDAHSSFEPRKVDVLCKKKIVDIAFGSGPHVLAVSKNG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+++SWG+ G+ QLG+ + P +I L + + +ACG S A++++G+++ WG
Sbjct: 95 EMYSWGHNGYCQLGNGGSGQGLTPTLINTNLQGKKILRVACGSHHSMALSQEGEIFAWGQ 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTTNQPTP 171
>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
Length = 328
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G+++ WG +
Sbjct: 60 GRLGLGI-----SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDD 114
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 115 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 174
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLGVPG 179
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG G
Sbjct: 175 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 227
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 157 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 209
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 210 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 269
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 270 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 328
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 28 LSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLL 85
+ +PS + L + V V+ G +T EG+++ G +N LG G G P+ +
Sbjct: 18 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQI 77
Query: 86 PNLVD--VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
L V+ + + +GG H+ ALT DGKVF WG G G+LGH N P +IEAL +
Sbjct: 78 TALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEALKTK 137
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ IACG S SAA+T G+LY WG + +LG
Sbjct: 138 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 170
Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG QLG KVP E L+ V +A G + AVT +GK+Y G A + +
Sbjct: 2 WGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGR 61
Query: 175 LGV 177
LG+
Sbjct: 62 LGL 64
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + GRLG G + L P +KAL + + ++CG + +T EG+
Sbjct: 88 EVYSWGWGD-FGRLGHG------NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 140
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG GD P+ + +RI +A G H+ A+T+DG ++ WG+G
Sbjct: 141 VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGR 200
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + + E ++ +ACG + +V+ G LY +G +K QLG
Sbjct: 201 YGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLG 257
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 106/190 (55%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG + +P K++A + + V+ G T +TE+G
Sbjct: 140 EVQSWGRNQ-NGQLGLG------DTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 192
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + + ++ +A G H+++++ G ++++G+
Sbjct: 193 LYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSK 252
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH ++ +P +EAL++ F++ I+ G + A+T GKLY WG K Q+GV G
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-G 311
Query: 180 LPVVQPCPVE 189
+ Q PV+
Sbjct: 312 NNLDQCSPVQ 321
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG-QLW 61
+WGR E +G+LG G +A P+++ AL + +V+CG T+ ++ G +++
Sbjct: 38 SWGRGE-DGQLGHG------DAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVY 90
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P + L +RI QIA G H LA+T +G+V SWG +G
Sbjct: 91 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNG 150
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+A + +A G +AAVTE G LY WG + LG+
Sbjct: 151 QLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 206
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + +P +V A ++ V+CG T+ ++ G
Sbjct: 192 DLYGWGWGR-YGNLGLG------DRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGA 244
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P L L + I QI+ G H++ALT DGK++ WG+
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 304
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G +Q P+ + D+ V ++CG + AVTE+ ++ WG + QLG+
Sbjct: 305 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGI 362
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Query: 33 KVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR 92
+V A P V +S G ++ L + +WG + +LG GD P L L +
Sbjct: 9 EVTAPPRTVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ 68
Query: 93 IIQIANGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
I+ + G H++A + G +V+SWG+G G+LGH + + P+ I+AL + IACG
Sbjct: 69 IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLGV 177
S AVT +G++ WG ++ QLG+
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGL 154
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
IP K++AL ++ +S G TM LT +G+L+ WG N ++G G+ + P +
Sbjct: 266 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 325
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
D +++Q++ G H+LA+T+ VF+WG G +GQLG + ++ P +IEAL+
Sbjct: 326 DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 95/169 (56%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
L++WG ++ G+LGLG ++ P ++ L +P+A ++ GG + +LT
Sbjct: 167 RLFSWGCNK-YGQLGLGSSHSFHDT-----PQQIVCLRGIPIAQIASGGNHSFILTWSRA 220
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG NS +LG D P L +L + +++ I+ G H++ALT +G VFS+G GG
Sbjct: 221 VFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGG 280
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT-EKGKLYMW 167
GQLGH+ TQN+ +P + L ++ +ACG + A + GK+Y +
Sbjct: 281 FGQLGHNSTQNEILPKRVMELMGSVISQVACGRRHTVAFSPSSGKMYAF 329
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 12/183 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR +G+L +G +E + P +V L + + +SCG T+++T++G+L
Sbjct: 4 VFGWGR-SNDGQLSIGF----SEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKL 58
Query: 61 WNWGANSNYELG----RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
++ G+N ELG R V +L+ +L +++IQ A G SL +T G+VFSWG
Sbjct: 59 YSCGSNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWG 118
Query: 117 YGGHGQLGHS--FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
GQLG + ++ P ++++LA V I CG + A+T+ G+L+ WG K Q
Sbjct: 119 RNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQ 178
Query: 175 LGV 177
LG+
Sbjct: 179 LGL 181
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 1 ELYTWGRDE-GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
+LY+ G +E GE LG + + A + + V +L + V + G F++V+T G
Sbjct: 57 KLYSCGSNEYGE----LGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAG 112
Query: 59 QLWNWGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
++++WG N +LGRG + KPKL+ +L ++QI G H LALTDDG++FSWG
Sbjct: 113 EVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWG 172
Query: 117 YGGHGQLG----HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+GQLG HSF P I L + IA GG+ S +T ++ WG
Sbjct: 173 CNKYGQLGLGSSHSF---HDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSF 229
Query: 173 SQLGV 177
QLG+
Sbjct: 230 GQLGL 234
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GRLG G + + +P ++ PV V+CG T+V+ EG+
Sbjct: 86 QVYSWGWGD-FGRLGHG------DCNDVFVPRPIEFFSGRPVHRVACGDTHTLVVAGEGE 138
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G N N +LG G P+L+ L R+ +A G HSLA T+ G VFSWG+G
Sbjct: 139 LFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATESGTVFSWGWGR 198
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG +Q++ +P + L + CG SA V+E G+++ +G +K QLG
Sbjct: 199 YGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLG 255
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 101/189 (53%), Gaps = 9/189 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+T+GR++ G+LGLG N+ LS P V AL V +V+CG ++ TE G
Sbjct: 138 ELFTFGRNQ-NGQLGLGH---TNDC--LS-PQLVVALQGERVRSVACGSEHSLAATESGT 190
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG LG G+ + P + L +R++ G HS +++DG+VF++G+
Sbjct: 191 VFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSK 250
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH ++ VP + AL ++ +A G + A G LY WG K QLG+ G
Sbjct: 251 YGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGL-G 309
Query: 180 LPVVQPCPV 188
+P PV
Sbjct: 310 DSSDRPSPV 318
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Query: 21 GPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGG 79
G E+ +P++V L + + + CG + V++E+G+++ +G + +LG GD
Sbjct: 203 GDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDR 262
Query: 80 WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI-E 138
P + L RI +A G H++A G ++ WG+ GQLG + ++ P+++
Sbjct: 263 TVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGG 322
Query: 139 ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
ALA + V+ + CG + AVTE G++Y WG + QLG
Sbjct: 323 ALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLG 360
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V AVSCG ++ + G + +WG + +LG G PK + L D I + G
Sbjct: 15 VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGA 74
Query: 101 YHSLALT-DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
+++A+ G+V+SWG+G G+LGH + VP IE + V +ACG + + V
Sbjct: 75 EYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTHTLVVA 134
Query: 160 EKGKLYMWGNAKDSQLGV 177
+G+L+ +G ++ QLG+
Sbjct: 135 GEGELFTFGRNQNGQLGL 152
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLT-EEGQ 59
+ +WGR E +G+LG G +A P + L + +V CG +T+ + GQ
Sbjct: 34 VTSWGRGE-DGQLGHG------QADECLAPKAISTLTDAGIESVVCGAEYTIAVAPSRGQ 86
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG LG GD + P+ + + ++A G H+L + +G++F++G
Sbjct: 87 VYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQ 146
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG T + P ++ AL E V +ACG S A TE G ++ WG + LG
Sbjct: 147 NGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLG 203
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 29 SIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN 87
++P +V AL +++V+ G TM G L+ WG N +LG GD P L+
Sbjct: 263 TVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGG 322
Query: 88 -LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
L R+ + G H++A+T+ G+V+SWG G +GQLGH Q+
Sbjct: 323 ALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQD 366
>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
africana]
Length = 531
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVR-IIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + ++ ++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P + + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHVLVEKERVVEIAACHSAHTSAAKTQSGNVYMWGQCRGQSVTL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY-HSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G H L T+DG
Sbjct: 35 LYVTDNDEVFVFGMNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSAPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 77 VGGWKPKLLPNLVDVRIIQIA----NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
VG W L + ++ I+ A G +L +TD+ +VF +G LG Q+
Sbjct: 4 VGKWPIFTLLSPQEIASIRKACVFGTSGNEALYVTDNDEVFVFGMNYSNCLGTGDNQSTL 63
Query: 133 VPMVIEALADEFVTHIACGGSTSAAV-TEKGKLYMWGNAKDSQLG 176
VP +EAL + + ++ G + + TE G +Y WG+ SQLG
Sbjct: 64 VPKKLEALCGKKIKSLSYGSAPHVLLSTEDGVVYAWGHNGYSQLG 108
>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
Length = 531
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVR-IIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + ++ ++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 4/161 (2%)
Query: 21 GPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVG 78
G ++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDSQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ 114
Query: 79 GWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM-V 136
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P V
Sbjct: 115 GIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV 174
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 175 TNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P+ I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLNPVHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDNDEVFVFGMNYSNCLGTGDSQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 77 VGGWKPKLLPNLVDVRIIQIA----NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
VG W L + ++ I+ A N +L +TD+ +VF +G LG +Q+
Sbjct: 4 VGKWPIFTLLSPQEIASIRKACVFGNSANEALYVTDNDEVFVFGMNYSNCLGTGDSQSTL 63
Query: 133 VPMVIEALADEFVTHIACG-GSTSAAVTEKGKLYMWGNAKDSQLG----VPGLPVVQPC 186
VP +EAL + + ++ G G TE G +Y WG+ SQLG G+ +Q C
Sbjct: 64 VPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC 122
>gi|281211994|gb|EFA86155.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 537
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 92/157 (58%), Gaps = 9/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y G +E G LG+G ++ G ++ P+KV A+P V +SCG T+ L E G+++
Sbjct: 312 VYAMGNNE-TGTLGVGD----DKLGRVTKPTKV-AMPEKVKQLSCGATHTLFLAESGRVY 365
Query: 62 NWGANSNYELGRGDRVGG-WKPKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ G S LG GD + P L+P + +R+ Q++ GG HS+ LTD+G+V++WG G
Sbjct: 366 SCGWGSEGRLGLGDNTTNRYVPTLIPFFHENGIRVTQVSAGGAHSMVLTDEGQVYTWGCG 425
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTS 155
+G+LGH+ N +P ++++LA IA G TS
Sbjct: 426 ENGKLGHNSETNSNIPQLVKSLAKRNAILIAAGIDTS 462
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 29 SIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN 87
+IP+ V + + VA V CG + +++ G ++ G N LG GD G K
Sbjct: 280 NIPTLVPEMESIKVAKVYCGYDCSFLVSARGNVYAMGNNETGTLGVGDDKLGRVTKPTKV 339
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADE--F 144
+ ++ Q++ G H+L L + G+V+S G+G G+LG T N+ VP +I +
Sbjct: 340 AMPEKVKQLSCGATHTLFLAESGRVYSCGWGSEGRLGLGDNTTNRYVPTLIPFFHENGIR 399
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
VT ++ GG+ S +T++G++Y WG ++ +LG
Sbjct: 400 VTQVSAGGAHSMVLTDEGQVYTWGCGENGKLG 431
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 45/202 (22%)
Query: 21 GPNEAGGLSIP-SKVKALP--------VPVAAVSCGGFFTMVLT-------------EEG 58
G N AG + +P +++ P + + V G FT++LT E+G
Sbjct: 124 GTNSAGQMGLPQNQIFKFPTLSDMFKMIDIDQVHLGRSFTLILTSNKLLNNSFNKSEEQG 183
Query: 59 QLWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+L + G+N +LG G+ + G P+++ L + ++ I G HS+A+T G F WGY
Sbjct: 184 KLLSVGSNDFGQLGLGEGMRGSSTPRVVEKLNNQELVSIGAGFDHSMAVTKSGHTFGWGY 243
Query: 118 GGHGQLGHSFTQNQKV----------------------PMVIEALADEFVTHIACGGSTS 155
GQ+G + ++V P ++ + V + CG S
Sbjct: 244 NVEGQIGQRIVEYKRVESAGENVDSMENSMTPDAEYNIPTLVPEMESIKVAKVYCGYDCS 303
Query: 156 AAVTEKGKLYMWGNAKDSQLGV 177
V+ +G +Y GN + LGV
Sbjct: 304 FLVSARGNVYAMGNNETGTLGV 325
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 16/163 (9%)
Query: 30 IPSKVKALPVPVAAVSCGGFF--TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN 87
+P+KV LP + S + + +LTE+ QL+ WG NS ++G P L
Sbjct: 88 LPTKVTHLPHRLRIKSAQSTWQTSCILTEDNQLFMWGTNSAGQMGLPQNQIFKFPTLSDM 147
Query: 88 LVDVRIIQIANGGYHSLALT-------------DDGKVFSWGYGGHGQLGH-SFTQNQKV 133
+ I Q+ G +L LT + GK+ S G GQLG +
Sbjct: 148 FKMIDIDQVHLGRSFTLILTSNKLLNNSFNKSEEQGKLLSVGSNDFGQLGLGEGMRGSST 207
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
P V+E L ++ + I G S AVT+ G + WG + Q+G
Sbjct: 208 PRVVEKLNNQELVSIGAGFDHSMAVTKSGHTFGWGYNVEGQIG 250
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 28/189 (14%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
G+LGLG G G S P V+ L + ++ G +M +T+ G + WG N +
Sbjct: 194 GQLGLGEG-----MRGSSTPRVVEKLNNQELVSIGAGFDHSMAVTKSGHTFGWGYNVEGQ 248
Query: 71 LGR-----------GDRVGGWK-----------PKLLPNLVDVRIIQIANGGYHSLALTD 108
+G+ G+ V + P L+P + +++ ++ G S ++
Sbjct: 249 IGQRIVEYKRVESAGENVDSMENSMTPDAEYNIPTLVPEMESIKVAKVYCGYDCSFLVSA 308
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G V++ G G LG + +V + E V ++CG + + + E G++Y G
Sbjct: 309 RGNVYAMGNNETGTLGVGDDKLGRVTKPTKVAMPEKVKQLSCGATHTLFLAESGRVYSCG 368
Query: 169 NAKDSQLGV 177
+ +LG+
Sbjct: 369 WGSEGRLGL 377
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 22/137 (16%)
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVD-----VRIIQIANGGYHSLALTDDGKVF 113
QLW +G+ ++ +LG + KLLP V +RI + S LT+D ++F
Sbjct: 66 QLWMFGSCNDAKLG----LATDHDKLLPTKVTHLPHRLRIKSAQSTWQTSCILTEDNQLF 121
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT-------------E 160
WG GQ+G Q K P + + + + G S + +T E
Sbjct: 122 MWGTNSAGQMGLPQNQIFKFPTLSDMFKMIDIDQVHLGRSFTLILTSNKLLNNSFNKSEE 181
Query: 161 KGKLYMWGNAKDSQLGV 177
+GKL G+ QLG+
Sbjct: 182 QGKLLSVGSNDFGQLGL 198
>gi|146185478|ref|XP_001031903.2| Kinesin motor domain containing protein [Tetrahymena thermophila]
gi|146143053|gb|EAR84240.2| Kinesin motor domain containing protein [Tetrahymena thermophila
SB210]
Length = 1349
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 33/197 (16%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG---- 58
+ WG + +GRLGLG RG + L+ + +SCG + T +TE+G
Sbjct: 915 FAWGSGK-DGRLGLGTDRGESNPTMLNSQQFI--------YLSCGYYHTAGITEKGIYNQ 965
Query: 59 ------------------QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
+L+ WG ++ +LG P L + I+Q+ G
Sbjct: 966 YYLQTDKVKNILYFIQTGELYLWGKGNSGQLGNSSFNSSKVPILANIPQTIPIVQVVCGW 1025
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF--VTHIACGGSTSAAV 158
HS+AL+ G+V+SWG G GQLGH+ + P +IE + + + +I+CG S SAA+
Sbjct: 1026 QHSMALSSSGQVYSWGLGEEGQLGHNDMETLNTPKMIEYFSQQAKQIKYISCGHSHSAAI 1085
Query: 159 TEKGKLYMWGNAKDSQL 175
+E+G LY WG D +L
Sbjct: 1086 SEEGDLYTWGCNYDYRL 1102
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 22/193 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELY WG+ G+LG +IP + P+ V CG +M L+ GQ+
Sbjct: 984 ELYLWGKGN-SGQLGNSSFNSSKVPILANIPQTI-----PIVQVVCGWQHSMALSSSGQV 1037
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDV--RIIQIANGGYHSLALTDDGKVFSWGYG 118
++WG +LG D PK++ +I I+ G HS A++++G +++WG
Sbjct: 1038 YSWGLGEEGQLGHNDMETLNTPKMIEYFSQQAKQIKYISCGHSHSAAISEEGDLYTWGCN 1097
Query: 119 GHGQLGHSFTQNQKVPMVIEA-------------LADEF-VTHIACGGSTSAAVTEKGKL 164
+L + +NQ P++ + ++ +F V ++ G + +A +T G +
Sbjct: 1098 YDYRLMINENKNQYKPVLTQLHYLKEIYQKSGQDISQKFNVQLVSLGVNHTAVITVDGSV 1157
Query: 165 YMWGNAKDSQLGV 177
Y G +LG+
Sbjct: 1158 YTAGLGNHGELGI 1170
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 25/136 (18%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG------------ 110
WG+ + LG G G P +L + + I ++ G YH+ +T+ G
Sbjct: 917 WGSGKDGRLGLGTDRGESNPTMLNSQ---QFIYLSCGYYHTAGITEKGIYNQYYLQTDKV 973
Query: 111 ----------KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
+++ WG G GQLG+S + KVP++ + + CG S A++
Sbjct: 974 KNILYFIQTGELYLWGKGNSGQLGNSSFNSSKVPILANIPQTIPIVQVVCGWQHSMALSS 1033
Query: 161 KGKLYMWGNAKDSQLG 176
G++Y WG ++ QLG
Sbjct: 1034 SGQVYSWGLGEEGQLG 1049
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 30/153 (19%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP---VAAVSCGGFFTMVLTEE 57
++Y+WG E EG+LG N+ L+ P ++ + +SCG + ++EE
Sbjct: 1036 QVYSWGLGE-EGQLG------HNDMETLNTPKMIEYFSQQAKQIKYISCGHSHSAAISEE 1088
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKL----------------LPNLVDVRIIQIANGGY 101
G L+ WG N +Y L + +KP L + +V+++ + G
Sbjct: 1089 GDLYTWGCNYDYRLMINENKNQYKPVLTQLHYLKEIYQKSGQDISQKFNVQLVSL--GVN 1146
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP 134
H+ +T DG V++ G G HG+LG N+ VP
Sbjct: 1147 HTAVITVDGSVYTAGLGNHGELG--IILNESVP 1177
Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 60/125 (48%), Gaps = 21/125 (16%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK---------------PKLLPNL 88
++CG FT+VL EG ++ +G ++ +G G K P+++
Sbjct: 1216 IACGYEFTIVLNAEGTVYQFGK----KISQGPDFIGTKQEIQDYVTKDSQNVTPQIMYEF 1271
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALADEFVT 146
++R+ QIA G H +T++G++++WG + +L G ++ K + E + +
Sbjct: 1272 GNIRVQQIAAGKNHIAIITENGELYTWGKNFYDKLDMGDDKHESNKPVKLFEGINNLQCI 1331
Query: 147 HIACG 151
++CG
Sbjct: 1332 QVSCG 1336
Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DRVGGWKP-KLLPNLVDVRIIQI 96
+ V ++ G ++TE G+L+ WG N +L G D+ KP KL + +++ IQ+
Sbjct: 1274 IRVQQIAAGKNHIAIITENGELYTWGKNFYDKLDMGDDKHESNKPVKLFEGINNLQCIQV 1333
Query: 97 ANGGYHSLAL 106
+ G +HS+ L
Sbjct: 1334 SCGEFHSVCL 1343
>gi|12844231|dbj|BAB26286.1| unnamed protein product [Mus musculus]
gi|148700107|gb|EDL32054.1| hect domain and RLD 4, isoform CRA_d [Mus musculus]
Length = 233
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + AV+CG T+ L ++GQ++ WG +S+ +LG +G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG Q Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G N +LG KP+ + L I+ +A G H+LAL D G+V++WG G
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 122 QLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + +ACG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVG 78
++ WG N +LG D G
Sbjct: 211 IFGWGRNKFGQLGLNDENG 229
>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Rattus norvegicus]
Length = 531
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+L+
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVR-IIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + ++ IA G S+A+ D G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 96/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG++F+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V +IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGL 215
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
EL+ WG + G++G G P KV V ++CG +M + + G
Sbjct: 148 ELFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + + AC + TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L RI ++ G G H L T+DG
Sbjct: 35 IYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+L+ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
++ +TD +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 34 AIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ +Q C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVC 122
>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
distachyon]
Length = 1092
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 21/204 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
+LYTWG +G + GL G G + + +P K+ P + V+++SCG F T+++T
Sbjct: 385 DLYTWG--DGTFKFGL-LGHGNDISHW--VPKKLHG-PLEGIHVSSISCGPFHTVIVTSA 438
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G S LG GDR PK + +L +R ++ A G +H+ A+ +
Sbjct: 439 GQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSS 498
Query: 109 ---DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
GK+F+WG G G+LGH +++ VP + AL + +ACG + A+T G +Y
Sbjct: 499 NCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVY 558
Query: 166 MWGNAKDSQLGVPGLPVVQPCPVE 189
G+A QLG P + P VE
Sbjct: 559 TMGSAVYGQLGNPQADGMLPARVE 582
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+++TWG D +GRLG G + +P+ V AL P V+CG T+ LT G
Sbjct: 504 KIFTWG-DGDKGRLGHG------DKESRLVPTCVAALVEPNFCQVACGHCLTVALTTSGH 556
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+ +LG G ++ L + +I+ G YH LT +V++WG G
Sbjct: 557 VYTMGSAVYGQLGNPQADGMLPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGA 616
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+G+LGH T ++ P ++EAL D+ V ++ CG + +AA+ ++ W + D +
Sbjct: 617 NGRLGHGNTDDKNTPTLVEALKDKQVRNVVCGTNFTAAIC----IHKWISGVDQSM 668
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 6/147 (4%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A+ + V +SCGG +++++G++++WG S LG G PKL+ L + I
Sbjct: 310 AVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALTHMNIEL 369
Query: 96 IANGGYHSLALTDDGKVFSWGYG--GHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGG 152
+A G YH+ A+T G +++WG G G LGH + VP + L V+ I+CG
Sbjct: 370 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLEGIHVSSISCGP 429
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ VT G+L+ +G D GV G
Sbjct: 430 FHTVIVTSAGQLFTFG---DGSFGVLG 453
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L V + + I+ GG H+ ++ G+++SWG G+LGH + P +I+AL
Sbjct: 304 PKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALT 363
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ +ACG + AVT G LY WG+
Sbjct: 364 HMNIELVACGEYHTCAVTLSGDLYTWGD 391
>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
CCMP2712]
Length = 240
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 95/174 (54%), Gaps = 11/174 (6%)
Query: 8 DEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGAN 66
D GRLG G R S+P + +L + ++ G +M + ++G+L+ WG
Sbjct: 70 DGANGRLGHGNCRN------YSLPQPIASLESKRITFIAAGWTHSMAIDDDGKLFTWGCG 123
Query: 67 SNYELGRGDRVGGWKPKLLPNLVDVRI-IQIANGGY-HSLALTDDGKVFSWGYGGHGQLG 124
+ LG G+ + W+P+ + L +R+ +A+G Y HS ++G V++WG G HGQLG
Sbjct: 124 NAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLGEHGQLG 183
Query: 125 HSFTQNQKVPMVIEALADE--FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
T++ P++++++AD + ++CGG+ +AAVT G L WG QLG
Sbjct: 184 VGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQLG 237
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 97/179 (54%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++YTWG + G+LG R S+PS++ V V + SCGG T++L++EG++
Sbjct: 13 DVYTWGANF-FGQLGRDYSRL------WSLPSELHLPNVFVVSASCGGMHTLLLSKEGKV 65
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+++G +N LG G+ P+ + +L RI IA G HS+A+ DDGK+F+WG G
Sbjct: 66 FSFGDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKLFTWGCGNA 125
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGS--TSAAVTEKGKLYMWGNAKDSQLGV 177
G+LGH + P ++ L + + GS SA E G ++ WG + QLGV
Sbjct: 126 GRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLGEHGQLGV 184
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
G + +++ G ++ WGAN +LGR D W +L +V ++ + GG H+L L
Sbjct: 1 GPYHAALVSGLGDVYTWGANFFGQLGR-DYSRLWSLPSELHLPNVFVVSASCGGMHTLLL 59
Query: 107 TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
+ +GKVFS+G G +G+LGH +N +P I +L + +T IA G + S A+ + GKL+
Sbjct: 60 SKEGKVFSFGDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKLFT 119
Query: 167 WGNAKDSQLG 176
WG +LG
Sbjct: 120 WGCGNAGRLG 129
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFF--TMVLTEE 57
+L+TWG GRLG G + P V L + + A+ G + + V E
Sbjct: 116 KLFTWGCGNA-GRLGHG------NVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCEN 168
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSW 115
G +W WG + +LG G +P L+ ++ D + I++++ GG H+ A+T+DG + +W
Sbjct: 169 GTVWTWGLGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTW 228
Query: 116 GYGGHGQLGH 125
G G GQLGH
Sbjct: 229 GRGDWGQLGH 238
>gi|268569112|ref|XP_002640436.1| Hypothetical protein CBG08488 [Caenorhabditis briggsae]
Length = 985
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 85/154 (55%), Gaps = 15/154 (9%)
Query: 21 GPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW 80
PN+A G + V AV+CG T+ LT++ ++W+ G+N + +LGRG R G
Sbjct: 3 APNDADGTA-----------VKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGS 51
Query: 81 KPKLLPNLVD-VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN-QKVPMVIE 138
+L V I+QIA G HSLA+ DDG+VF+WG HGQLG T Q++P I
Sbjct: 52 FSIYPVSLTSGVGIVQIAAGRAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRIN 111
Query: 139 ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
L + V +A G A+TE G++Y+WG D
Sbjct: 112 QLNE--VVQVASGSDHCIALTEDGRVYVWGEQAD 143
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 19 GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG 78
GRG G SI V + ++ G ++ + ++G+++ WG+N + +LG + +
Sbjct: 43 GRGKRSEGSFSIYPVSLTSGVGIVQIAAGRAHSLAVADDGRVFAWGSNEHGQLGMENTIT 102
Query: 79 GWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMV 136
W+ PK + L +V +Q+A+G H +ALT+DG+V+ WG G+ H P +
Sbjct: 103 -WQEMPKRINQLNEV--VQVASGSDHCIALTEDGRVYVWGEQADGRCIHH-------PEL 152
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+E L + + G A++ G ++ WG +LG+
Sbjct: 153 VEHLNAIPIVRVEAGARHCVAISASGAVFTWGQNNSGELGM 193
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+Y WG ++ +GR + P V+ L +P+ V G + ++ G +
Sbjct: 135 VYVWG-EQADGRC-------------IHHPELVEHLNAIPIVRVEAGARHCVAISASGAV 180
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG N++ ELG D + + + +++ A G H++ LT G+ FS+G
Sbjct: 181 FTWGQNNSGELGMDDFRPQTSVHHVTQMDGLGVVEAACGDNHTILLTHCGRTFSFGSDAL 240
Query: 121 GQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ G + + P + L VT IA G + A+ +G Y +G QLG
Sbjct: 241 GQCGFGKKLEKRPNPTAVSDLIGSHVTRIAAGACHTIAII-RGSPYPFGLNSSGQLG 296
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 86 PNLVD-VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF 144
PN D + +A G H++ LT D K++S G GQLG + +L
Sbjct: 4 PNDADGTAVKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTSGV 63
Query: 145 -VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
+ IA G + S AV + G+++ WG+ + QLG+ Q P
Sbjct: 64 GIVQIAAGRAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMP 107
>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
Kuenenia stuttgartiensis]
Length = 620
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 94/175 (53%), Gaps = 10/175 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG ++ EG++G G N + P +V+ L + AV G F++ L +G++W
Sbjct: 331 VYAWGLND-EGQIGNGEKSADNP---VLNPVQVQGL-TDIDAVCAGATFSLALGIDGRVW 385
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N +LG G P + NL +I +A G HSLA+ + GKV SWG G
Sbjct: 386 AWGLNDEGQLGDGTNTNSTTPVEVTNLA--KISAVACGSDHSLAIRN-GKVKSWGLNDEG 442
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG T++ P+ + L+D + ++A G S S A+T KG +Y+WG D QLG
Sbjct: 443 QLGDGSTRSSSAPLDVTGLSD--IVYVAAGESHSLAITSKGNIYVWGLNGDGQLG 495
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 96/179 (53%), Gaps = 13/179 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG +E +G+LG G N++ + ++ AL + AV CGG +M L G++
Sbjct: 175 KLWAWGLNE-DGQLG----DGTNDSQTTPVAVQINALTT-ITAVDCGGDHSMALDSLGRV 228
Query: 61 WNWGANSNYELGRGDR---VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
W WG N + ELG G P +PNL D II I+ GG +S+AL+ DG V +WG
Sbjct: 229 WAWGYNGDGELGGGTTENNSNVPVPVPVPNLTD--IIAISAGGEYSIALSSDGSVLTWGA 286
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG+ T VP I +L + I+ G + S AVTE G +Y WG + Q+G
Sbjct: 287 NSDGQLGNGNTDQNSVPTKISSLP--LMKGISAGEAHSLAVTEDGFVYAWGLNDEGQIG 343
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 14/178 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+ TWG + +G+LG G S+P+K+ +LP+ + +S G ++ +TE+G +
Sbjct: 280 SVLTWGANS-DGQLGNG------NTDQNSVPTKISSLPL-MKGISAGEAHSLAVTEDGFV 331
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG N ++G G++ P L P V I + G SLAL DG+V++WG
Sbjct: 332 YAWGLNDEGQIGNGEKSAD-NPVLNPVQVQGLTDIDAVCAGATFSLALGIDGRVWAWGLN 390
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG N P+ + LA ++ +ACG S A+ GK+ WG + QLG
Sbjct: 391 DEGQLGDGTNTNSTTPVEVTNLAK--ISAVACGSDHSLAI-RNGKVKSWGLNDEGQLG 445
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 31 PSKVKALPVPVAAV-----SCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
P+ + P P V S G ++ L EG+LW WG N + +LG G P +
Sbjct: 142 PTGTQPQPAPTPGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAV 201
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ---NQKVPMVIEALAD 142
I + GG HS+AL G+V++WGY G G+LG T+ N VP+ + L D
Sbjct: 202 QINALTTITAVDCGGDHSMALDSLGRVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLTD 261
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ I+ GG S A++ G + WG D QLG
Sbjct: 262 --IIAISAGGEYSIALSSDGSVLTWGANSDGQLG 293
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 76 RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
R G +P+ P V QI+ G HSLAL +GK+++WG GQLG +Q P+
Sbjct: 141 RPTGTQPQPAPT-PGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPV 199
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
++ A +T + CGG S A+ G+++ WG D +LG
Sbjct: 200 AVQINALTTITAVDCGGDHSMALDSLGRVWAWGYNGDGELG 240
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 1 ELYTWG-RDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
++ WG DEG+ LG G N + + + K ++AV+CG ++ + G+
Sbjct: 383 RVWAWGLNDEGQ----LGDGTNTNSTTPVEVTNLAK-----ISAVACGSDHSLAI-RNGK 432
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N +LG G P + L D I+ +A G HSLA+T G ++ WG G
Sbjct: 433 VKSWGLNDEGQLGDGSTRSSSAPLDVTGLSD--IVYVAAGESHSLAITSKGNIYVWGLNG 490
Query: 120 HGQLGHSFTQNQKVPMVIE 138
GQLG ++ + P I+
Sbjct: 491 DGQLGDGTNRSSRTPKTID 509
>gi|196008365|ref|XP_002114048.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
gi|190583067|gb|EDV23138.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
Length = 429
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 91/172 (52%), Gaps = 13/172 (7%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
G+LGLG E S P+ VK L V V+CGG T+ LT+ G+++ WG N
Sbjct: 48 GQLGLGE-----EILERSRPTAVKKLLEVEFIQVACGGVHTVALTKAGEIYTWGCNDECA 102
Query: 71 LGRGDRVGGWKPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVFSWG--YGGHGQLG 124
LGR D + + LP LVD V+IIQ++ G H+ AL DDG+VF WG + G +G
Sbjct: 103 LGR-DTSDTSEAEYLPGLVDGLDNVKIIQVSAGDNHTAALADDGRVFCWGNFWDNRGSIG 161
Query: 125 HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ Q P+V+ ++ V I G + AA+T G ++ WG + QLG
Sbjct: 162 LNLAGKQPRPIVMLGDPNDPVIKIGSGNNHVAALTANGLIFTWGCGEQGQLG 213
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 38 PVPVAAVSCGG-FFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQI 96
P + AV+ G F L GQ+ N S Y L + D + L + D R I I
Sbjct: 256 PYNLFAVNAAGEVFACGLNNYGQIGNGNITSLYYLAKIDSLSA-----LNDGNDERQILI 310
Query: 97 ANGGYHSLALTDDGKVFSWGYGGHGQLGHS-FTQNQKVPMVIEALADEFVTHIACGGSTS 155
A+G +H+L L +G+V+S G G +G+LG + P IE LA+ + + CG + S
Sbjct: 311 ASGEHHTLILARNGRVYSIGRGDYGRLGLGPDVKECSHPTEIETLANSDIKAVTCGLAVS 370
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
AV+ G +Y WG + QLG
Sbjct: 371 FAVSNSGDVYSWGMGTNLQLG 391
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 31/209 (14%)
Query: 1 ELYTWGRD-EGEGRLGLG-PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
++ WG + G +GL G+ P L P+ PV + G LT G
Sbjct: 146 RVFCWGNFWDNRGSIGLNLAGKQPRPIVMLGDPND------PVIKIGSGNNHVAALTANG 199
Query: 59 QLWNWGANSNYELGR-------GDRVGGWKPKLLPNLV--------DVRIIQIANGGYHS 103
++ WG +LGR D G K L P + D+R I G Y+
Sbjct: 200 LIFTWGCGEQGQLGRVAERFCSRDTRQGLKRFLQPAVARVTQRSKKDIRFSDIFVGPYNL 259
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA------DEFVTHIACGGSTSAA 157
A+ G+VF+ G +GQ+G+ + I++L+ DE IA G +
Sbjct: 260 FAVNAAGEVFACGLNNYGQIGNGNITSLYYLAKIDSLSALNDGNDERQILIASGEHHTLI 319
Query: 158 VTEKGKLYMWGNAKDSQLGVPGLPVVQPC 186
+ G++Y G +LG+ P V+ C
Sbjct: 320 LARNGRVYSIGRGDYGRLGLG--PDVKEC 346
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+Y+ GR + GRLGLGP + S P++++ L + AV+CG + ++ G
Sbjct: 325 RVYSIGRGD-YGRLGLGP-----DVKECSHPTEIETLANSDIKAVTCGLAVSFAVSNSGD 378
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
+++WG +N +LG P L+ + GG H+ L
Sbjct: 379 VYSWGMGTNLQLGSSTDDDILTPTLVKTKESYNFFAASAGGQHTAIL 425
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYH 102
++ G T++L G++++ G LG G V P + L + I + G
Sbjct: 310 IASGEHHTLILARNGRVYSIGRGDYGRLGLGPDVKECSHPTEIETLANSDIKAVTCGLAV 369
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
S A+++ G V+SWG G + QLG S + P +++ + GG +A + +K
Sbjct: 370 SFAVSNSGDVYSWGMGTNLQLGSSTDDDILTPTLVKTKESYNFFAASAGGQHTAILGKK 428
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++WG++ G+LGLG +S+P +++L +P A ++ GG + LT G
Sbjct: 157 HIFSWGQNR-YGQLGLGMT-----GQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D P LL L R+I I+ G H+ ALT +G VF++G GG
Sbjct: 211 VFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT-EKGKLYMWGNAKDSQLGV 177
+GQLGH+ T ++ P + L VT IACG + A T GK+ +G + QLG
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGT 329
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVPV-AAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNL 88
P +V AL + A+SCG T+ L ++GQ+++WG S+ +LG + + P+ + +L
Sbjct: 75 PEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTH 147
DV++ Q+A G +HSLAL+ G +FSWG +GQLG T Q+ VP +++L
Sbjct: 135 SDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IA GG+ S A+T G ++ WG K QLG+
Sbjct: 195 IAAGGAHSFALTLSGAVFGWGRNKFGQLGL 224
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 77/138 (55%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V CG T L E+G ++ G N +LG KP+ + L I+ ++ G
Sbjct: 36 VRDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGHEK--SRKKPEQVVALDAQIIVALSCGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
H+LAL D G+VFSWG G GQLG ++F + +VP I++L+D V +ACG S A++
Sbjct: 94 SHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALS 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
+ G ++ WG + QLG+
Sbjct: 154 KGGHIFSWGQNRYGQLGL 171
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ P+ +KAL V +SCG T LT+EG +
Sbjct: 211 VFGWGRNKF-GQLGL------NDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+LA T GK+ S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGG 323
Query: 120 HGQLGHSFTQNQKVP 134
+GQLG T N+K P
Sbjct: 324 NGQLGTRSTCNRKSP 338
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ R+ + G H+ L +DG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH +++K P + AL + + ++CG S + A+ +KG+++ WG D QLG+
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGL 118
>gi|403352920|gb|EJY75989.1| Kinesin motor domain containing protein [Oxytricha trifallax]
Length = 1386
Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 18/182 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
+++ WG + +GR G G PN+A +SCG + +T +
Sbjct: 936 KVFVWGSGK-DGRCGNGKESSEKLPNQANTSH----------NFTQLSCGYHHSAAVTSD 984
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G + +WG +LG GD P + LV ++IIQ++ G HS+AL+ G++FSWGY
Sbjct: 985 GMILSWGRGIFGQLGHGDTENYSLPTPIEALVKIQIIQVSCGWQHSMALSSQGRIFSWGY 1044
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVT--HIACGGSTSAAVT--EKGKLYMWGNAKDS 173
G GQLGH T + +P I+ + IACG S S +T + +LY+WG D
Sbjct: 1045 GEDGQLGHGDTNDYLLPKEIDFFRKNSINVGMIACGHSHSGCITDGQSSQLYLWGCNPDC 1104
Query: 174 QL 175
+L
Sbjct: 1105 RL 1106
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV--RIIQIANGGYHSLALTDDGKVFSWG 116
+++ WG+ + G G + LPN + Q++ G +HS A+T DG + SWG
Sbjct: 936 KVFVWGSGKDGRCGNGKE----SSEKLPNQANTSHNFTQLSCGYHHSAAVTSDGMILSWG 991
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G GQLGH T+N +P IEAL + ++CG S A++ +G+++ WG +D QLG
Sbjct: 992 RGIFGQLGHGDTENYSLPTPIEALVKIQIIQVSCGWQHSMALSSQGRIFSWGYGEDGQLG 1051
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 43/204 (21%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+ +WGR G G LG G N S+P+ ++AL + + VSCG +M L+ +G+
Sbjct: 987 ILSWGR----GIFGQLGHGDTEN----YSLPTPIEALVKIQIIQVSCGWQHSMALSSQGR 1038
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVD------VRIIQIANGGYHSLALTD--DGK 111
+++WG + +LG GD LLP +D + + IA G HS +TD +
Sbjct: 1039 IFSWGYGEDGQLGHGDT----NDYLLPKEIDFFRKNSINVGMIACGHSHSGCITDGQSSQ 1094
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMV------------------IEALADEFVTHIACGGS 153
++ WG +L +NQ +P + +E L +++ G +
Sbjct: 1095 LYLWGCNPDCRLMIEENENQLLPTLTILEQAKMKNYERGDQLKLEGLEP---CYLSLGVT 1151
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGV 177
+A VT G+LY G+ D QLGV
Sbjct: 1152 HTAIVTRSGELYTGGSMLDGQLGV 1175
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 30/148 (20%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-------RVGGWK--------------- 81
VSCG FT+VL E +++ +G S+ LG G+ + K
Sbjct: 1236 VSCGDAFTIVLNERNEVYAFGKLSHGRLGVGNGQNLNQQKTNQLKQSIQNQTYQSTEGSN 1295
Query: 82 -----PKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVP 134
P+LL +L +++QI+ G H+ +TD GK+++WG+ + QLG ++ VP
Sbjct: 1296 DCIAEPQLLQSLSQSEKVVQISAGCRHAACVTDSGKLYAWGFNFYEQLGLGDSEKDFDVP 1355
Query: 135 M-VIEALADEFVTHIACGGSTSAAVTEK 161
V + L V ++CG + A+ ++
Sbjct: 1356 TKVSKGLQSSKVKFVSCGYFHTGALVQQ 1383
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 105/194 (54%), Gaps = 17/194 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG +P K++A V + V+ G T +TE+G+
Sbjct: 143 EVQSWGRNQ-NGQLGLGTTEDS------LVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGE 195
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYHSLALTDDGKVFSW 115
L+ WG LG GDR +L+P V + ++I +A G H+++++ G ++++
Sbjct: 196 LYGWGWGRYGNLGLGDR----NDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTY 251
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G+ +GQLGH ++ P +EAL D +++ I+ G + A+T G LY WG K Q+
Sbjct: 252 GWSKYGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQV 311
Query: 176 GVPGLPVVQPCPVE 189
GV G + PV+
Sbjct: 312 GV-GDNIDHCSPVQ 324
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + GRLG G + L P +KAL + + ++CG + +T +G+
Sbjct: 91 EVYSWGWGD-FGRLGHG------NSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGE 143
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G P+ + V I +A G H+ A+T+DG+++ WG+G
Sbjct: 144 VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGR 203
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + + + + +ACG + +V+ G LY +G +K QLG
Sbjct: 204 YGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLG 260
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG-QLW 61
+WGR E +G+LG G +A P+++ L + + +++CG T +E +++
Sbjct: 41 SWGRGE-DGQLGHG------DAEDRPTPTQLSTLDGLDIISITCGADHTTSYSESRMEVY 93
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P+ + L ++I QIA G H LA+T DG+V SWG +G
Sbjct: 94 SWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNG 153
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+A + +A G +AAVTE G+LY WG + LG+
Sbjct: 154 QLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGL 209
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
Query: 31 PSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL--PN 87
P KV+AL ++ GG+ TM LT +G L+ WG N ++G GD + P + P+
Sbjct: 270 PHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPH 329
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
++QI+ G H+LA+T+ VFSWG G +GQLGH + ++ +P +IE L+
Sbjct: 330 EQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGESMDRNLPKIIEVLS 383
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 24 EAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
E G + S+V V +S G ++ L + +WG + +LG GD P
Sbjct: 3 EDEGAASGSEVSGPIRQVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPT 62
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD 142
L L + II I G H+ + ++ +V+SWG+G G+LGH + + P I+AL
Sbjct: 63 QLSTLDGLDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHS 122
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ IACG S AVT G++ WG ++ QLG+
Sbjct: 123 LKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGL 157
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY WG G LGLG + +P KV + + V+CG T+ ++ G
Sbjct: 195 ELYGWGWGR-YGNLGLG------DRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGG 247
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P + L D I I+ G H++ALT DG ++ WG+
Sbjct: 248 LYTYGWSKYGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNK 307
Query: 120 HGQLGHSFTQNQKVPMVIEALADEF--VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G + P+ ++ ++ + I+CG + A+TE+ ++ WG + QLG
Sbjct: 308 FGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLG 366
>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1089
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 99/197 (50%), Gaps = 13/197 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G D G+LGLG E P KV L + ++CG T VLT G+
Sbjct: 116 DLYAFG-DNLSGQLGLGHNFTAKE----QTPQKVPPLGRAKITQLACGQDHTAVLTSSGE 170
Query: 60 LWNWGANSNYELG------RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
L+ +G N + LG G + P+L+ L ++QI G H++ALT G V+
Sbjct: 171 LFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVY 230
Query: 114 SWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
WG G GQLG TQN+ P +V + L+ H+ACGG + AVT+ +Y +G+ +
Sbjct: 231 CWGENGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRH 290
Query: 173 SQLGVPGLPVVQPCPVE 189
QLG+ V+ P P
Sbjct: 291 GQLGLGRRGVIVPVPTR 307
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 10/168 (5%)
Query: 30 IPSKVKALPVP---VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP 86
+P +V P +A V CG T LT +G + +G +LG G+ P+ +
Sbjct: 32 LPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFGNGVKGQLGIGNTDSHSNPQRVH 91
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG--HSFTQNQKVPMVIEALADEF 144
L ++++A G HSLALT+ G ++++G GQLG H+FT ++ P + L
Sbjct: 92 LLSGKGVVKMAAGLEHSLALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAK 151
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL-----PVVQPCP 187
+T +ACG +A +T G+L+M+GN +D LGV G P+V P
Sbjct: 152 ITQLACGQDHTAVLTSSGELFMFGNNRDGALGVAGHANEGPPIVASAP 199
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 9/128 (7%)
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV------RIIQIANGGYHSLALTDD 109
E +W G NS +LG G + LP V RI ++ G H+ ALT D
Sbjct: 6 ERSLVWAVGGNSKGQLGNGTPT---QSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSD 62
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G V +G G GQLG T + P + L+ + V +A G S A+TE G LY +G+
Sbjct: 63 GDVLGFGNGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFGD 122
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 123 NLSGQLGL 130
>gi|326664251|ref|XP_688463.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 992
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+ WG + G+LGL E G P +++L +PVA +S GG + VL+ G
Sbjct: 138 QLFVWGEN-ALGQLGLR-----KEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGV 191
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG NS +LG GD + P ++ +L +I+ I+ GG H+ AL G VF++G GG
Sbjct: 192 VFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGG 251
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLG-- 176
GQLGH+ +++ P ++ L V+ + CG + + T KL Y +G QLG
Sbjct: 252 FGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNG 311
Query: 177 ------VPGLPVVQP 185
VP LPV QP
Sbjct: 312 EQVKQSVP-LPVDQP 325
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 80/137 (58%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNLVDVRIIQIANG 99
V ++CG +M LT +GQL+ WG N+ +LG R ++ G P+ L +L + + QI+ G
Sbjct: 120 VIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAG 179
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
G HS L+ G VF WG GQLG T ++ VP V+ +L + + I+CGG +AA+
Sbjct: 180 GNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALA 239
Query: 160 EKGKLYMWGNAKDSQLG 176
+ G ++ +G+ QLG
Sbjct: 240 KGGTVFTFGSGGFGQLG 256
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN-QKVPMVIEALADE 143
L L + ++IQIA G HS+ALT+DG++F WG GQLG Q + P +++L
Sbjct: 112 LKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGI 171
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V I+ GG+ S ++ G ++ WG QLG+
Sbjct: 172 PVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGL 205
>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus laevis]
gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
Length = 526
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E+Y WG + G++G G IP KV + V ++CG +M + + G
Sbjct: 147 EVYAWGYNNS-GQVGSGS------TANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNG 199
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ Q+ G H+LALTD+G +++WG
Sbjct: 200 EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGAN 259
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P+ + + V AC S TSAA ++ G++YMWG + +
Sbjct: 260 SYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCRGQSVIT 319
Query: 178 PGL 180
P L
Sbjct: 320 PHL 322
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 96/171 (56%), Gaps = 5/171 (2%)
Query: 21 GPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVG 78
G +A + P ++ L + ++S G G +++T +G++++WG N+ +LG G
Sbjct: 54 GTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQ 113
Query: 79 GWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM-V 136
P ++ NL++ + +A G +HS+ LT DG+V++WGY GQ+G T NQ +P V
Sbjct: 114 ALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKV 173
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
L ++ V IACG +S AV + G++Y WG + QLG+ G QP P
Sbjct: 174 TSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL-GSSGNQPTP 223
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ G NS+ LG GD +P+ + L RI+ ++ G G H + +T DG
Sbjct: 34 LYITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDG 93
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+V+SWG+ + QLG+ T P + L ++ +ACG S +T G++Y WG
Sbjct: 94 EVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGY 153
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 154 NNSGQVG-SGSTANQPIP 170
>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
Length = 980
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG P ++ AL + VA VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRKGTPRGEQ-------PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L ++IIQ+A G YHS+AL++DG+VFSWG HGQ
Sbjct: 102 ASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--L 180
LG F +Q P + +L + +A GG S A++ G + WG+ QL + G
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNA 220
Query: 181 PVVQPCPV 188
PV + PV
Sbjct: 221 PVQRYKPV 228
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 99/180 (55%), Gaps = 11/180 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG EG+LG+G + IP K+K L + + V+CG + ++ L+E+GQ+
Sbjct: 96 VFAWGA-ASEGQLGIGEFKETT-----FIPKKIKTLAGIKIIQVACGHYHSVALSEDGQV 149
Query: 61 WNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG NS+ +LG G P+ + +L + + Q+A GG+HS AL+ G F WG
Sbjct: 150 FSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNS 209
Query: 120 HGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQL G++ + P+ I AL V I+CG +A +T+ GK++ +G+ QLG
Sbjct: 210 AGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG 269
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 96/174 (55%), Gaps = 12/174 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG + G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGTN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L G V +KP + L + ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGN 169
+GQLGH T ++ P ++E + + V+ I CG T A + G++ +G
Sbjct: 262 DNSYGQLGHDPTAEKRGPQLVERI-EGLVSQIDCGSDHTLAYIYTTGQVVSFGR 314
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
G +++L +G + + G NS +LGR G +P+ +P L + + ++ G HSLA+
Sbjct: 31 GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90
Query: 107 TDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
G+VF+WG GQLG F + +P I+ LA + +ACG S A++E G+++
Sbjct: 91 CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVF 150
Query: 166 MWGNAKDSQLGV 177
WG QLG+
Sbjct: 151 SWGTNSHGQLGL 162
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
++Q A+G +HSL L DG V S G GQLG T + P I AL V ++CG
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGK 84
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
S AV KG+++ WG A + QLG+
Sbjct: 85 EHSLAVCHKGRVFAWGAASEGQLGI 109
>gi|403335798|gb|EJY67083.1| hypothetical protein OXYTRI_12623 [Oxytricha trifallax]
Length = 1128
Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/184 (32%), Positives = 100/184 (54%), Gaps = 10/184 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E ++WG DE G+LG G GP+ ++P K + V + VSCG T ++++G +
Sbjct: 7 EFFSWGNDE-MGQLGHGQ-EGPDRKKIFNLP-KSLSFEVLIQQVSCGSAHTSFISKQGYV 63
Query: 61 WNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRI--IQIANGGYHSLALTDDGKVFSWG 116
+++G NS+ +LG D + P L+ +LV ++ +QI+ GG+H+ LT G V+ WG
Sbjct: 64 FSFGCNSDGQLGVNDPAIKFSSAPLLISDLVSLQTNPVQISCGGFHTAVLTSVGDVYIWG 123
Query: 117 YGGHGQLGHSFTQNQKV--PMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
GQ G S NQ + P + A++ + CG +A V+ G+LY +G+ +
Sbjct: 124 RNLQGQCGRSINYNQFMFAPHKLHTDSANKTFRQVDCGDQHTAVVSSTGELYTFGDNSEG 183
Query: 174 QLGV 177
QLG+
Sbjct: 184 QLGI 187
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 12/176 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYT+G D EG+LG+G + + V + VSCG T+VLT G +
Sbjct: 173 ELYTFG-DNSEGQLGIGV----EFKNTVDRAALVTGISEETIQVSCGYKHTLVLTNHGTV 227
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ G N YEL G +P + + + +I GG+ S+A+T ++ WG G
Sbjct: 228 FGMGTNKRYELASGTLQKSSQPIRIQTIDMFAVEKIIAGGF-SVAITSQNELLVWGSGDF 286
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G F QK+ M D V+ S AA+ ++G +Y WG + QLG
Sbjct: 287 G----VFQSPQKIFMEDVRFVD--VSLSKSYDSFGAAIDDQGFVYTWGQNQFGQLG 336
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Query: 1 ELYTWGRD-EGEGRLGLGPGRGPNEAGGLSIPSKVK--ALPVPVAAVSCGGFFTMVLTEE 57
++Y WGR+ +G+ GR N + P K+ + V CG T V++
Sbjct: 118 DVYIWGRNLQGQC------GRSINYNQFMFAPHKLHTDSANKTFRQVDCGDQHTAVVSST 171
Query: 58 GQLWNWGANSNYELGRG-------DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
G+L+ +G NS +LG G DR L + IQ++ G H+L LT+ G
Sbjct: 172 GELYTFGDNSEGQLGIGVEFKNTVDRAA------LVTGISEETIQVSCGYKHTLVLTNHG 225
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF G +L Q P+ I+ + D F G S A+T + +L +WG+
Sbjct: 226 TVFGMGTNKRYELASGTLQKSSQPIRIQTI-DMFAVEKIIAGGFSVAITSQNELLVWGSG 284
>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
Length = 449
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 103/181 (56%), Gaps = 13/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS-IPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
++TWG EG+LG+G E+ +S +P+K+ +L + + VSCG + ++ L+E+G
Sbjct: 93 RVFTWGAGS-EGQLGIG------ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDG 145
Query: 59 QLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
Q+++WG+N +LG G+ + P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 146 QVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGN 205
Query: 118 GGHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
GQL G+S + P I AL V +I+CG ++ +TE G+++ +G + Q
Sbjct: 206 NRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQ 265
Query: 175 L 175
L
Sbjct: 266 L 266
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 100/182 (54%), Gaps = 10/182 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+Y+ G D G+LG + P ++AL V + VSCG ++ + +G+
Sbjct: 41 RVYSCG-DNSRGQLGQKSPQSTKR------PEPIQALSTVHIDLVSCGKEHSVAVCHQGR 93
Query: 60 LWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WGA S +LG G+ + + P + +L ++IIQ++ G YHSLAL++DG+VFSWG
Sbjct: 94 VFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSN 153
Query: 119 GHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + +Q P +++L + +A GG+ S A++ G + WGN + QL +
Sbjct: 154 RQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLAL 213
Query: 178 PG 179
G
Sbjct: 214 SG 215
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++++ G NS +LG+ +P+ + L V I ++ G HS+A+ G
Sbjct: 33 SLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQG 92
Query: 111 KVFSWGYGGHGQLGHSFTQNQK-VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG ++ +P I +LA + ++CG S A++E G+++ WG+
Sbjct: 93 RVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGS 152
Query: 170 AKDSQLGVPGLPVVQPCP 187
+ QLG+ Q P
Sbjct: 153 NRQGQLGLGNNLCSQASP 170
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 12/174 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG + +G+LGLG N + P KVK+L +P+A V+ GG + L+ G
Sbjct: 146 QVFSWGSNR-QGQLGLG-----NNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGT 199
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG N + +L G + +KP + L + ++ I+ G H+ LT+DG+VF++G
Sbjct: 200 SFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFG 259
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGN 169
QL HS + P +IE + V+ I CG T A V G++ G
Sbjct: 260 GSSSEQLQHSPRSGRGGPQLIEGIGGH-VSQIECGSYHTIAYVYTTGQVVSLGR 312
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%)
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
G +P+ L +++++ A+G HSL L + +V+S G GQLG Q+ K P I
Sbjct: 8 GRRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPI 67
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+AL+ + ++CG S AV +G+++ WG + QLG+
Sbjct: 68 QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI 107
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG +P K+++ V V ++ G T +TE+G
Sbjct: 149 EVQSWGRNQ-NGQLGLGTTEDS------LLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGD 201
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + ++ +++ IA G H++ ++ G ++++G+
Sbjct: 202 LYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSK 261
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH ++ VP +EAL D ++ I+ G + A+T GKLY WG K Q+GV
Sbjct: 262 YGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV 319
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + +P KV ++ + ++CG T+ ++ G
Sbjct: 201 DLYGWGWGR-YGNLGLG------DRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGS 253
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P L L D I QI+ G H++ALT DGK++ WG+
Sbjct: 254 LYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNK 313
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G T + P+ ++ D+ V +ACG + A TEK ++ WG QLG
Sbjct: 314 FGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLG 370
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GRLG G + + P VKAL + + ++CG + +T G+
Sbjct: 97 QVYSWGWGD-FGRLGHG------NSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGE 149
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G P+ + + V + IA G H+ A+T+DG ++ WG+G
Sbjct: 150 VQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGR 209
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + ++ E + IACG + V+ G LY +G +K QLG
Sbjct: 210 YGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLG 266
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 11/180 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP---VAAVSCGGFFTMVLTE-E 57
L +WGR E +G+LG G +A +P+ + + +V CG T +E E
Sbjct: 43 LCSWGRGE-DGQLGHG------DAEDRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDE 95
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
Q+++WG LG G+ + P+ + L ++I QIA G H LA+T G+V SWG
Sbjct: 96 QQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGR 155
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG T++ +P I++ V IA G +AAVTE G LY WG + LG+
Sbjct: 156 NQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 215
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P K++AL ++ +S G TM LT +G+L+ WG N ++G GD P +
Sbjct: 275 VPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFP 334
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
D ++ Q+A G H+LA T+ VFSWG G GQLGH ++ P++I+AL+
Sbjct: 335 EDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDALS 387
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR--IIQ 95
P V VS G ++ L L +WG + +LG GD P +L I
Sbjct: 21 PPAVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITS 80
Query: 96 IANGGYHSLALT-DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
+ G H+ A + D+ +V+SWG+G G+LGH + + P ++AL + IACG S
Sbjct: 81 VICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSH 140
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
AVT G++ WG ++ QLG+
Sbjct: 141 CLAVTMAGEVQSWGRNQNGQLGL 163
>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
niloticus]
Length = 531
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 30 IPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP- 86
+P K+ L V ++S G G ++ TE+G+L+ WG N +LG G G P L+
Sbjct: 64 VPKKLDFLSGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSA 123
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFV 145
NL++ ++ ++A G +HS+ALTD G+V++WGY GQ+G T NQ P V L ++
Sbjct: 124 NLLNKKVTEVACGSHHSMALTDTGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVA 183
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
I CG ++S AV + G++Y WG + QLG+
Sbjct: 184 VSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGL 215
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVS--CGGFFTMVLTEEG 58
E+Y WG + G++G G P +V + AVS CG ++ + + G
Sbjct: 148 EVYAWGYNNC-GQVGSGS------TANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P L L + + QI +G HS+ALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P+ I + V AC + TSAA T+ G++YMWG + + +
Sbjct: 261 TYGQLGTGNKSNQLSPVQILTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQCRGQSIVL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG + G +LG G G + L V V+CG +M LT+ G++
Sbjct: 95 ELFAWGHN-GYSQLG----NGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDTGEV 149
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI-IQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N+ ++G G P+ + + + ++ + I G SLA+ D+G+V+ WGY G
Sbjct: 150 YAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGYNG 209
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + L V I G + S A+T++G LY WG QLG
Sbjct: 210 NGQLGLGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLG 266
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T + +++ +G N + LG GD + PK L L +++ ++ G G H L T+DG
Sbjct: 35 IYITNDDEVFVFGLNCSNCLGTGDSLSTIVPKKLDFLSGRKVVSLSYGSGPHILLATEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
++F+WG+ G+ QLG+ T P+++ A L ++ VT +ACG S A+T+ G++Y WG
Sbjct: 95 ELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDTGEVYAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 8/176 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG + GRLG G + L IP +KAL + V ++CG + +T +G++
Sbjct: 88 VYSWGWGD-FGRLGHG------NSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEV 140
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N N +LG G P L V + +A G H+ A+T++GK++ WG+G +
Sbjct: 141 LGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRY 200
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G LG +++ VP + A+A E + +ACG + V E G +Y +G +K QLG
Sbjct: 201 GNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLG 256
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 10/173 (5%)
Query: 5 WGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAA-VSCGGFFTMVLTEEGQLWNW 63
WGR G LGLG + +P +V A+ + V+CG T+ + E G ++ +
Sbjct: 197 WGR---YGNLGLG------DREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTF 247
Query: 64 GANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL 123
G + +LG GD P + L +I I G H+ AL DG+++ WG+ GQ+
Sbjct: 248 GWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQV 307
Query: 124 GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G T++Q P +++ L D+ VT + CG + A+T++G +Y WG QLG
Sbjct: 308 GCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLG 360
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 90/176 (51%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ-LW 61
+WGR E +G+LG G +A P+ V AL +++V+CG T L+ + ++
Sbjct: 37 SWGRGE-DGQLGHG------DAEERHFPTIVSALDDCEISSVTCGADHTTALSNSTKTVY 89
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P+ + L + + QIA G H LA+T DG+V WG +G
Sbjct: 90 SWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNG 149
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ P + A V +A G + AVTE GKLY WG + LG+
Sbjct: 150 QLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGL 205
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Query: 32 SKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV 91
S + + V A+S G ++ L + +WG + +LG GD P ++ L D
Sbjct: 7 SSSRGVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDC 66
Query: 92 RIIQIANGGYHSLALTDDGK-VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
I + G H+ AL++ K V+SWG+G G+LGH + + +P I+AL V IAC
Sbjct: 67 EISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIAC 126
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G S A+T G++ WG ++ QLG+
Sbjct: 127 GDSHCLAITTDGEVLGWGRNQNGQLGL 153
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 30 IPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
IP +V+AL + A++ G T L +G+L+ WG N ++G G+ P+L+ L
Sbjct: 265 IPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGL 324
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
D + + G H+LA+TD G V+SWG G GQLGH T ++ P IE L+ +
Sbjct: 325 QDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILSSD 379
>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
leucogenys]
Length = 814
Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL + +P +V + PV+ +SCG + + +T +G+L+
Sbjct: 161 LFMWG-DNSEGQIGL------KNVTNVCVPQQV-TIGKPVSWISCGYYHSAFVTTDGELY 212
Query: 62 NWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G N +LG +++ G P+L+ + + ++IQ+A GG H++ LT++ V+++G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P VIE + D+ +++I+CG S +A +T+ G +Y +G+ + +LG+
Sbjct: 271 FGQLGLGTFLFETSDPKVIENIRDQTISYISCGESHTALITDIGLMYTFGDGRHGKLGL 329
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTEGGN 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD ++ + +I Q++ G S ALT+DG++F WG
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + V+ I+CG SA VT G+LY++G ++ +LG+P
Sbjct: 168 SEGQIGLKNVTNVCVPQ--QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLP 225
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VPV +SCG + V+T +L+ +G+N+ +LG G + KP + L ++ A
Sbjct: 36 VPVH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAAC 94
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAA 157
G H+L T+ G V++ G GQLG T+ + VI E + ++ G +TSAA
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
+TE G+L+MWG+ + Q+G+
Sbjct: 155 LTEDGRLFMWGDNSEGQIGL 174
>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
Length = 1020
Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL + +P +V + PV+ +SCG + + +T +G+L+
Sbjct: 161 LFMWG-DNSEGQIGL------KNVSNVCVPQQV-TIGKPVSWISCGYYHSAFVTTDGELY 212
Query: 62 NWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G N +LG +++ G P+L+ + + ++IQ+A GG H++ LT++ V+++G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P VIE + D+ +++I+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGN 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD ++ + +I Q++ G S ALT+DG++F WG
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + V+ I+CG SA VT G+LY++G ++ +LG+P
Sbjct: 168 SEGQIGLKNVSNVCVPQ--QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLP 225
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VPV +SCG + V+T +L+ +G+N+ +LG G + KP + L ++ A
Sbjct: 36 VPVH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAAC 94
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAA 157
G H+L T+ G V++ G GQLG T+ + VI E + ++ G +TSAA
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
+TE G+L+MWG+ + Q+G+
Sbjct: 155 LTEDGRLFMWGDNSEGQIGL 174
>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
rubripes]
Length = 531
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 96/181 (53%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEG 58
E+Y +G L G ++ +P KV L V ++S G G ++ TE+G
Sbjct: 42 EVYAFG-------LNCSNCLGTGDSQCTIVPKKVDILSGRKVVSLSYGSGPHILLATEDG 94
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+L+ WG N +LG G G P L+ L++ ++ ++A G +HS+ALTD G+V++WGY
Sbjct: 95 ELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMALTDSGEVYAWGY 154
Query: 118 GGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G T NQ P V L + I CG ++S AV + G++Y WG + QLG
Sbjct: 155 NNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLG 214
Query: 177 V 177
+
Sbjct: 215 L 215
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG + G +LG G G + L V V+CG +M LT+ G++
Sbjct: 95 ELFAWGHN-GYSQLG----NGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMALTDSGEV 149
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI-IQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N+ ++G G P+ + + + R+ + I G SLA+ D+G+V+ WGY G
Sbjct: 150 YAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNG 209
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + AL V + G + S A+T++G LY WG QLG
Sbjct: 210 NGQLGLGNNGNQLTPCRLVALQGLCVQQVVSGYAHSLALTDEGLLYAWGANTYGQLGT 267
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVS--CGGFFTMVLTEEG 58
E+Y WG + G++G G P +V + AVS CG ++ + + G
Sbjct: 148 EVYAWGYNNC-GQVGSGS------TANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P L L + + Q+ +G HSLALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQVVSGYAHSLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P+ I + V AC + TSAA T+ G++YMWG + + +
Sbjct: 261 TYGQLGTGNKSNQLSPVQIMTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQCRGQSIIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PYL 323
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T + +++ +G N + LG GD PK + L +++ ++ G G H L T+DG
Sbjct: 35 IYITSDDEVYAFGLNCSNCLGTGDSQCTIVPKKVDILSGRKVVSLSYGSGPHILLATEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
++F+WG+ G+ QLG+ T P+++ A L + VT +ACG S A+T+ G++Y WG
Sbjct: 95 ELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMALTDSGEVYAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + EG+LGLG P + A +P+A ++CGG+ ++ +++ G
Sbjct: 184 ELYSWGSN-SEGQLGLGTDTKYEIK-----PKFISAFIGIPIAFIACGGYHSIAISKSGA 237
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + +I A G S+ LT DG VF+ G G
Sbjct: 238 VFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGM 297
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH N+ +P + L VT I+CG T A V +G++Y WG QLG
Sbjct: 298 YGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 18/174 (10%)
Query: 6 GRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
G ++G RL L PG + A AA CG + T+ + E GQL++WG+
Sbjct: 94 GHEKGRKRLQLIPG--------------LDAFVFKKAA--CGAYHTLAINEWGQLFSWGS 137
Query: 66 NSNYELGRGDR-VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
N+ +LG + P+++ L ++QIA G H+ ALT++G+++SWG GQLG
Sbjct: 138 NTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLG 197
Query: 125 H-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ T+ + P I A + IACGG S A+++ G ++ WG QLG+
Sbjct: 198 LGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGL 251
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALPVPVAAVSCGGFFTMVLTEEGQ 59
+++ WG G LGLG N + IP ++ + ++CG +T+V+T+ G+
Sbjct: 27 DMFCWG-STIHGELGLGGIEDEN----ILIPRELDFKKAAEIQQIACGENYTVVITQIGE 81
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++ G N +LG G + +L+P L + A G YH+LA+ + G++FSWG
Sbjct: 82 IYSCGNNDYGQLGHEK--GRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNT 139
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +S + P +++ L V IACG + A+T G+LY WG+ + QLG+
Sbjct: 140 EGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGL 198
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL N+ ++P +++ L + +CG F++ LT +G +
Sbjct: 238 VFGWGKNTF-GQLGL------NDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGV 290
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA +LG G P+ + L+ + QI+ G H+LAL G+V++WG GG
Sbjct: 291 FTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGG 350
Query: 120 HGQLGHSFTQNQKVPMVIE 138
GQLG+ T++ P V+
Sbjct: 351 AGQLGNHSTRSVTTPQVVH 369
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPK--LLPNLVDVR----IIQIANGGYHSLALT 107
L ++ ++ WG+ + ELG +GG + + L+P +D + I QIA G +++ +T
Sbjct: 22 LHKKKDMFCWGSTIHGELG----LGGIEDENILIPRELDFKKAAEIQQIACGENYTVVIT 77
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
G+++S G +GQLGH + +K +I L ACG + A+ E G+L+ W
Sbjct: 78 QIGEIYSCGNNDYGQLGHE--KGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135
Query: 168 GNAKDSQLGVPGLPVVQPCP 187
G+ + QLG+ ++ P
Sbjct: 136 GSNTEGQLGLNSKNFMESSP 155
>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
distachyon]
Length = 913
Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 13/173 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+TWG D + RLG G ++ L+ + V+CG T+ LT G++
Sbjct: 267 KLFTWG-DGDKHRLGHG-----DKEARLNPTCVASLIDYDFYRVACGHSLTVGLTTSGKV 320
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
W G + +LG + G +P L+ + + + ++Q+A G YH LT +VF+WG G
Sbjct: 321 WTMGNSVYGQLGNPNSDG--RPCLVGDKITNEHVLQVACGSYHVSVLTSRSEVFTWGKGA 378
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+G+LGH ++QKVP ++EAL D V HIACG + +AA+ L+ W + D
Sbjct: 379 NGRLGHGDIEDQKVPTLVEALKDRSVRHIACGANFTAAIC----LHKWVSGAD 427
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 22/191 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
E++TWG D G GRLG G P V++L + V+CG F T +T G+
Sbjct: 97 EVFTWGEDSG-GRLGHGTREDSVH------PRLVESLAACNIDFVACGEFHTCAVTTTGE 149
Query: 60 LWNWGANSNYE--LGRGDRVGGWKPKLLPNLVD-VRIIQIANGGYHSLALTDDGKVFSWG 116
L+ WG ++ LG G VG W P+ + ++ +++ ++ G +H+ +T G++F++G
Sbjct: 150 LYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTWHTALITSMGQLFTFG 209
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE-----------KGKLY 165
G G LGH ++ P +E+L+ +ACG +AA+ E GKL+
Sbjct: 210 DGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLF 269
Query: 166 MWGNAKDSQLG 176
WG+ +LG
Sbjct: 270 TWGDGDKHRLG 280
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
ELYTWG +G +GL G G + G IP ++ + VA VSCG + T ++T G
Sbjct: 149 ELYTWG--DGTHNVGL-LGHGTDV--GHWIPRRISGALEGLQVAYVSCGTWHTALITSMG 203
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
QL+ +G S LG G+ P+ + +L ++ I +A G +H+ A+ +
Sbjct: 204 QLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATV 263
Query: 109 -DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
GK+F+WG G +LGH + + P + +L D +ACG S + +T GK++
Sbjct: 264 SAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTM 323
Query: 168 GNAKDSQLGVP 178
GN+ QLG P
Sbjct: 324 GNSVYGQLGNP 334
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 20/188 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G +S P +V++L + AV+CG + T + E
Sbjct: 204 QLFTFG-DGSFGVLGHG------NVKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIV 256
Query: 57 --------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+L+ WG + LG GD+ P + +L+D ++A G ++ LT
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDYDFYRVACGHSLTVGLTT 316
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GKV++ G +GQLG+ + + +V + + +E V +ACG + +T + +++ WG
Sbjct: 317 SGKVWTMGNSVYGQLGNPNSDGRPC-LVGDKITNEHVLQVACGSYHVSVLTSRSEVFTWG 375
Query: 169 NAKDSQLG 176
+ +LG
Sbjct: 376 KGANGRLG 383
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 37 LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQI 96
L + V V CG ++T G+++ WG +S LG G R P+L+ +L I +
Sbjct: 75 LVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFV 134
Query: 97 ANGGYHSLALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGS 153
A G +H+ A+T G++++WG G H G LGH +P I AL V +++CG
Sbjct: 135 ACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTW 194
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQ--PCPVE 189
+A +T G+L+ +G D GV G V+ CP E
Sbjct: 195 HTALITSMGQLFTFG---DGSFGVLGHGNVKSISCPRE 229
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L + + + + + G H+ +T G+VF+WG G+LGH ++ P ++E+LA
Sbjct: 68 PKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+ +ACG + AVT G+LY WG+
Sbjct: 128 ACNIDFVACGEFHTCAVTTTGELYTWGDG 156
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++WGR++ G+LGLG N L +P K++A V V ++ G T +TE+G
Sbjct: 154 HVHSWGRNQ-NGQLGLG-----NTEDSL-LPQKIQAFEGVRVKMIAAGAEHTAAVTEDGD 206
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + ++ +++ +A G H++ ++ G ++++G+
Sbjct: 207 LYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSK 266
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH ++ VP +EAL D ++ I+ G + A+ GKLY WG K Q+GV
Sbjct: 267 YGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGV 324
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 93/180 (51%), Gaps = 13/180 (7%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL----PVPVAAVS-CGGFFTMVLT-EE 57
+WGR E +G+LG G +A +P+ + A P VA+V CG T + EE
Sbjct: 48 SWGRGE-DGQLGHG------DAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEE 100
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
QL++WG LG G+ + P+ + L VRI QIA G H LA+T G V SWG
Sbjct: 101 LQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGR 160
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG T++ +P I+A V IA G +AAVTE G LY WG + LG+
Sbjct: 161 NQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 220
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY+WG + GRLG G + + P ++AL V + ++CG + +T G
Sbjct: 102 QLYSWGWGD-FGRLGHG------NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGH 154
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G+ P+ + VR+ IA G H+ A+T+DG ++ WG+G
Sbjct: 155 VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGR 214
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ +P + ++ + + +ACG + V+ G +Y +G +K QLG
Sbjct: 215 YGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLG 271
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + IP KV ++ + V+CG T+ ++ G
Sbjct: 206 DLYGWGWGR-YGNLGLG------DRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGS 258
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ +G + +LG GD P L L D I QI+ G H++AL DGK++ WG+
Sbjct: 259 IYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNK 318
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G ++ P+ + ++ V +ACG + A+TE ++ WG QLG
Sbjct: 319 FGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLG 375
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
Query: 30 IPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P K++AL ++ +S G TM L +G+L+ WG N ++G GD P +
Sbjct: 280 VPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFP 339
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
+ +++Q+A G H+LALT+ VFSWG G GQLGH ++ +P +I+AL+ +
Sbjct: 340 NEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSD 394
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN-- 98
V +S G ++ L G + +WG + +LG GD P +L D +A+
Sbjct: 27 VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 86
Query: 99 --GGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTS 155
G H+ A +D+ +++SWG+G G+LGH + + P I+AL +T IACG S
Sbjct: 87 ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHC 146
Query: 156 AAVTEKGKLYMWGNAKDSQLGV 177
AVT G ++ WG ++ QLG+
Sbjct: 147 LAVTVAGHVHSWGRNQNGQLGL 168
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 83 KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD 142
+ +P + ++ I+ G HS+AL G V SWG G GQLGH +++ VP V+ A D
Sbjct: 17 EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFD 76
Query: 143 E----FVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV-PGLPVVQPCPVE 189
+ + + CG T+A E+ +LY WG +LG V P P++
Sbjct: 77 DAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQ 129
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 31 PSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNL 88
P V AL + + V CG +M LTE GQ++ WG+NS +LG G+ + P+ + L
Sbjct: 92 PEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTL 151
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
++QIA G H LAL ++G +++WG G+GQLG + + Q+VP+ + L ++
Sbjct: 152 APFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQ 211
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
IACG + S +++ G +++WG+ + QLG+
Sbjct: 212 IACGANHSMVLSKSGVIFVWGSNRFGQLGL 241
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 8/184 (4%)
Query: 8 DEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGAN 66
+ G LGLG E + +P + L + V ++ G T+VLT G++ + G+N
Sbjct: 23 NTNSGELGLGGI----EDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSN 78
Query: 67 SNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS 126
+ +LG+ V KP+ + L +RI+Q+ G HS+ALT+ G+V+ WG GQLG+
Sbjct: 79 DHDQLGQ--EVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNG 136
Query: 127 FTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQP 185
Q ++ P ++ LA V IACG + A+ G LY WG+ + QLG+ + Q
Sbjct: 137 EGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQR 196
Query: 186 CPVE 189
PVE
Sbjct: 197 VPVE 200
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++Y WG + +G+LG G G + LS P VK L P V ++CG + L G
Sbjct: 121 QVYMWGSN-SKGQLGNGEG----QESRLS-PRFVKTLAPFTVVQIACGSNHCLALLNNGA 174
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLP----NLVDVRIIQIANGGYHSLALTDDGKVFSW 115
L+ WG N N +LG G VG +P+ +P NL+ + + QIA G HS+ L+ G +F W
Sbjct: 175 LYAWGDNGNGQLGIGT-VG--EPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVW 231
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G GQLG S +++ P +++ L + V IA GG+ SAA+T G ++ +G
Sbjct: 232 GSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFG 284
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 98/232 (42%), Gaps = 54/232 (23%)
Query: 2 LYTWGRDEGEGRLGLG----PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
LY WG D G G+LG+G P R P E L L +P++ ++CG +MVL++
Sbjct: 175 LYAWG-DNGNGQLGIGTVGEPQRVPVEVTNL--------LGLPLSQIACGANHSMVLSKS 225
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG- 116
G ++ WG+N +LG D P LL L + IA GG HS ALT G VF++G
Sbjct: 226 GVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGW 285
Query: 117 ---------------------------------------YGGHGQLGHSFTQNQKVPMVI 137
YG +GQLGH +Q PM I
Sbjct: 286 SFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTPMKI 345
Query: 138 EALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPV 188
+ L +T IA G T GK++ +G + QLG V P P+
Sbjct: 346 QELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLGSSVSMVSTPTPL 397
>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
paniscus]
Length = 815
Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL + +P +V + PV+ +SCG + + +T +G+L+
Sbjct: 161 LFMWG-DNSEGQIGL------KNVSNVCVPQQV-TIGKPVSWISCGYYHSAFVTTDGELY 212
Query: 62 NWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G N +LG +++ G P+L+ + + ++IQ+A GG H++ LT++ V+++G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P VIE + D+ +++I+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTEGGN 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD ++ + +I Q++ G S ALT+DG++F WG
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + V+ I+CG SA VT G+LY++G ++ +LG+P
Sbjct: 168 SEGQIGLKNVSNVCVPQ--QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLP 225
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VPV +SCG + V+T +L+ +G+N+ +LG G + KP + L ++ A
Sbjct: 36 VPVH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAAC 94
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAA 157
G H+L T+ G V++ G GQLG T+ + VI E + ++ G +TSAA
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
+TE G+L+MWG+ + Q+G+
Sbjct: 155 LTEDGRLFMWGDNSEGQIGL 174
>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
mutus]
Length = 1019
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG P ++ AL + VA VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRKGTPRGEQ-------PERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L ++IIQ+A G YHS+AL++DG+VFSWG HGQ
Sbjct: 102 ASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--L 180
LG F +Q P + +L + +A GG S A++ G + WG+ QL + G
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNA 220
Query: 181 PVVQPCPV 188
PV + PV
Sbjct: 221 PVQRYKPV 228
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 99/180 (55%), Gaps = 11/180 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG EG+LG+G + IP K+K L + + V+CG + ++ L+E+GQ+
Sbjct: 96 VFAWGA-ASEGQLGIGEFKETT-----FIPKKIKTLAGIKIIQVACGHYHSVALSEDGQV 149
Query: 61 WNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG NS+ +LG G P+ + +L + + Q+A GG+HS AL+ G F WG
Sbjct: 150 FSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNN 209
Query: 120 HGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQL G++ + P+ I AL V I+CG +A +T+ GK++ +G+ QLG
Sbjct: 210 AGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG 269
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
G +++L +G + + G NS +LGR G +P+ +P L + + ++ G HSLA+
Sbjct: 31 GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAV 90
Query: 107 TDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
G+VF+WG GQLG F + +P I+ LA + +ACG S A++E G+++
Sbjct: 91 CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVF 150
Query: 166 MWGNAKDSQLGV 177
WG QLG+
Sbjct: 151 SWGTNSHGQLGL 162
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 96/174 (55%), Gaps = 12/174 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG + G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGTN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+N+ +L G V +KP + L + ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGN 169
+GQLGH T ++ P ++E + + V+ I CG T A + G++ +G
Sbjct: 262 DNSYGQLGHDPTAEKRGPQLVERI-EGLVSQIDCGSDHTLAYIYTTGQVVSFGR 314
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
++Q A+G +HSL L DG V S G GQLG T + P I AL V ++CG
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGK 84
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
S AV KG+++ WG A + QLG+
Sbjct: 85 EHSLAVCHKGRVFAWGAASEGQLGI 109
>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 569
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ WGR+ G+LG G S P V+ P V AV+ G ++ LT G
Sbjct: 116 TVLAWGRNA-VGQLGDG------TTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGT 168
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG NS +LG G R P + I +A GG HSLALT G VF+WG
Sbjct: 169 VFAWGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNS 228
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG N+ P+V+ VT IA GGS S AVT G WGN QLG
Sbjct: 229 TGQLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLG 285
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 82/176 (46%), Gaps = 6/176 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++ WG D G+LG G + +S PS + AV+ GG ++ LT G +
Sbjct: 168 TVFAWG-DNSTGQLGDGTRTNRSTPVAVSFPSGTV-----ITAVAAGGMHSLALTSAGTV 221
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG NS +LG G R P ++ V + IA GG HSLA+T G +WG
Sbjct: 222 FAWGDNSTGQLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFV 281
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG N+ + + VT +A G + S A+T G + WG+ QLG
Sbjct: 282 GQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLG 337
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 83/194 (42%), Gaps = 17/194 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV--PVAAVSCGGFFTMVLTEEG 58
++ WG D G+LG G S P V LPV V A++ GG ++ +T G
Sbjct: 220 TVFAWG-DNSTGQLGDG------TRTNRSTP-VVVGLPVGTIVTAIAGGGSHSLAVTSAG 271
Query: 59 QLWNWGANSNYELGRG---DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
WG N +LG G +R +L P + +A G HSLALT G V SW
Sbjct: 272 NARAWGNNFVGQLGDGSNINRDASVHVRLPPGTT---VTAVAGGLTHSLALTSVGTVLSW 328
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G GQLG +++ P + +T +A G A+T G + WG QL
Sbjct: 329 GSNNWGQLGDGTARDRNTPGSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQL 388
Query: 176 GVPGLPVVQPCPVE 189
G G V+ PV
Sbjct: 389 G-DGTTTVRRTPVA 401
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+ A G HSLA+T G V +WG GQLG T N+ P+ + VT +A G
Sbjct: 98 VTAAAGGDAHSLAVTSAGTVLAWGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGF 157
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ S A+T G ++ WG+ QLG
Sbjct: 158 NHSLALTSAGTVFAWGDNSTGQLG 181
>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
Length = 1016
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG P ++ AL + VA VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRKGTPRGEQ-------PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L ++IIQ+A G YHS+AL++DG+VFSWG HGQ
Sbjct: 102 ASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--L 180
LG F +Q P + +L + +A GG S A++ G + WG+ QL + G
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNA 220
Query: 181 PVVQPCPV 188
PV + PV
Sbjct: 221 PVQRYKPV 228
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 99/180 (55%), Gaps = 11/180 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG EG+LG+G + IP K+K L + + V+CG + ++ L+E+GQ+
Sbjct: 96 VFAWGA-ASEGQLGIGEFKETT-----FIPKKIKTLAGIKIIQVACGHYHSVALSEDGQV 149
Query: 61 WNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG NS+ +LG G P+ + +L + + Q+A GG+HS AL+ G F WG
Sbjct: 150 FSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNS 209
Query: 120 HGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQL G++ + P+ I AL V I+CG +A +T+ GK++ +G+ QLG
Sbjct: 210 AGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG 269
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 96/174 (55%), Gaps = 12/174 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG + G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGTN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L G V +KP + L + ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGN 169
+GQLGH T ++ P ++E + + V+ I CG T A + G++ +G
Sbjct: 262 DNSYGQLGHDPTAEKRGPQLVERI-EGLVSQIDCGSDHTLAYIYTTGQVVSFGR 314
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
G +++L +G + + G NS +LGR G +P+ +P L + + ++ G HSLA+
Sbjct: 31 GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90
Query: 107 TDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
G+VF+WG GQLG F + +P I+ LA + +ACG S A++E G+++
Sbjct: 91 CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVF 150
Query: 166 MWGNAKDSQLGV 177
WG QLG+
Sbjct: 151 SWGTNSHGQLGL 162
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
++Q A+G +HSL L DG V S G GQLG T + P I AL V ++CG
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGK 84
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
S AV KG+++ WG A + QLG+
Sbjct: 85 EHSLAVCHKGRVFAWGAASEGQLGI 109
>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Acyrthosiphon pisum]
Length = 893
Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 61/178 (34%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG +E G G +S P+ V +L +P++ ++CGG+ + V+++ G
Sbjct: 177 ELYTWGSNE------FGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGA 230
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG + P L + V++ IA G S+ LT DG VF+ G G
Sbjct: 231 VFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGM 290
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH N+ VP + L VT + CG T V KG++Y +G QLG
Sbjct: 291 YGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLG 348
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 21 GPNEAGGLS---IPSKVKALP----VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELG- 72
G N+ G L +K++ +P + + +V+CG +M L E GQL+ WG++S +LG
Sbjct: 79 GSNDFGQLGHDGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGL 138
Query: 73 RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG-HGQLGHSFTQNQ 131
D +KPK++ L + ++QI+ G H +ALT+ G++++WG N
Sbjct: 139 ETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNV 198
Query: 132 KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
P ++ +L ++ IACGG S V++ G ++ WG QLG+
Sbjct: 199 SKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGI 244
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 12/172 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
+Y WG + G LGLG G E LS V V + +V+CG T+ +TE+GQL
Sbjct: 20 MYCWG-NTINGELGLG---GIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQL 75
Query: 61 WNWGANSNYELGRGDRVGGWKPKL--LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ G+N +LG G + KL +P + + + +A G HS+AL + G++++WG
Sbjct: 76 YACGSNDFGQLGH----DGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSD 131
Query: 119 GHGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
GQLG + Q P +++ LA + I+CG A+T G+LY WG+
Sbjct: 132 SCGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGS 183
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 9/123 (7%)
Query: 60 LWNWGANSNYELGRGDRVGGW--KPKLLPNLVDVRIIQ-IANGGYHSLALTDDGKVFSWG 116
++ WG N ELG G + P+ + N V I+ +A G H+LA+T+DG++++ G
Sbjct: 20 MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 79
Query: 117 YGGHGQLGHS--FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
GQLGH T+ QK+P V E+L +T +ACG + S A+ E G+LY WG+ Q
Sbjct: 80 SNDFGQLGHDGCRTKLQKIPGV-ESLV---MTSVACGEAHSMALNEWGQLYTWGSDSCGQ 135
Query: 175 LGV 177
LG+
Sbjct: 136 LGL 138
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WG+++ G+LG+ N LS P+++K + V V ++ G F++ LT +G +
Sbjct: 231 VFGWGKNDF-GQLGI------NSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGV 283
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA +LG G P+ + L+ + Q+ G H+L L G+V+S+G G
Sbjct: 284 FTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGS 343
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG + N P ++
Sbjct: 344 VGQLGTKSSINSNTPQLV 361
Score = 36.2 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI---ACGGST 154
N G+ L + + WG +G+LG + + E + E V +I ACG +
Sbjct: 12 NKGFRRLTM------YCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNH 65
Query: 155 SAAVTEKGKLYMWGNAKDSQLGVPG 179
+ AVTE G+LY G+ QLG G
Sbjct: 66 TLAVTEDGQLYACGSNDFGQLGHDG 90
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 89/179 (49%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
L+ WG D G+LG+G +S P+ V +L VP +S GG + L+ G
Sbjct: 160 HLFCWG-DNSSGQLGIGKTHS-----SMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGA 213
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG N +LG D P LL +L + ++ G H+ LT DG VF++G G
Sbjct: 214 LFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGT 273
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH+ ++ P + L VT IACG T A V G++Y +G D QLG+
Sbjct: 274 SGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGL 332
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 12/181 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP--VAAVSCGGFFTMVLTEEGQ 59
++ WG+ EG+LG+G E +S P ++ L V VSCG T L ++G
Sbjct: 1 MFCWGKC-SEGQLGVGE----TEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGT 55
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+N +LG+ P+ + + I ++ G H++A++D G VF+WG
Sbjct: 56 VYTCGSNEFGQLGQEK--SHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNS 113
Query: 120 HGQLGHSFTQNQKV---PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQ+G +KV P +++ LA V IACG + S A+T G L+ WG+ QLG
Sbjct: 114 YGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLG 173
Query: 177 V 177
+
Sbjct: 174 I 174
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 11/168 (6%)
Query: 21 GPNEAGGL------SIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR 73
G NE G L + P V A+ + V+CG T+ ++++G ++ WG NS ++G
Sbjct: 60 GSNEFGQLGQEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGL 119
Query: 74 GDRVG---GWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ- 129
G +V PK+L L + ++QIA G HS+ALT G +F WG GQLG T
Sbjct: 120 GSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHS 179
Query: 130 NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ P + +L I+ GG+ S A++ G L+ WG + QLGV
Sbjct: 180 SMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGV 227
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 9/136 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
L+ WG++E G+LG+ ++ +P+ +K+L V VSCG T VLT +G +
Sbjct: 214 LFGWGKNE-YGQLGV------HDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGV 266
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +G ++ +LG + P+ + L+ + QIA G H+LAL G+V+++G GG
Sbjct: 267 FTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGG 326
Query: 120 HGQLGHSFTQNQKVPM 135
GQLG T N PM
Sbjct: 327 DGQLGLGVTNNCNSPM 342
>gi|422294826|gb|EKU22126.1| hect domain and rld 4, partial [Nannochloropsis gaditana CCMP526]
Length = 516
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD--RVGGWKPKLLPNLVDVRIIQIAN 98
+ + CG T VLT++GQ+++WGA+S LG D ++ G P +P + +A
Sbjct: 284 IRQLVCGRHHTSVLTDKGQVFSWGASSFGRLGLPDPKKIVGL-PTEVPAFRCCPLAALAC 342
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G +H L L DG+ ++WGYG GQ G T + + P +E L + IACG S V
Sbjct: 343 GDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVV 402
Query: 159 TEKGKLYMWGNAKDSQLGV---PGLPVVQPCP 187
TE G+LY WG LG+ LP V+PCP
Sbjct: 403 TEAGRLYTWGYGDGGWLGLERASKLPYVEPCP 434
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Query: 31 PSKVK-ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL---- 85
PS+V +P+ VSCG + L E G + +WG +LG+GD + +P+L+
Sbjct: 161 PSRVSLGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPRLIHHLD 220
Query: 86 -PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ---KVPMVIEALA 141
P L R++ +A GG HS T VF +G+ +GQ+G N+ P+ + +
Sbjct: 221 PPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMSGIG 280
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP------GLPVVQP----CPV 188
+ + CG ++ +T+KG+++ WG + +LG+P GLP P CP+
Sbjct: 281 SSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGRLGLPDPKKIVGLPTEVPAFRCCPL 337
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V ++CG FT+ LT G + WG + RV P +R +Q++ G
Sbjct: 128 VQDIACGATFTIALTSRGVPYQWGTVNGRAYPEPSRVSLGVP--------LRCLQVSCGR 179
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-----ALADEFVTHIACGGSTS 155
H+LAL + G V SWG G GQLG + P +I L + V +ACGG S
Sbjct: 180 KHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHS 239
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
A T ++ +G + Q+G
Sbjct: 240 AVHTAGQSVFCFGFNRYGQVG 260
>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 448
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 102/187 (54%), Gaps = 8/187 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL++WG D EG+LG+ G + L S +K + V VSCG + T+ + + GQ+
Sbjct: 96 ELFSWG-DSSEGQLGINS-NGSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQV 153
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++G+ +LG G++ +KP LL +L +II++ G YH+L L + G+V+S G
Sbjct: 154 CSFGSGKKGQLGTGNQNKQYKPFLLNSL--SQIIKVKCGFYHTLFLDESGRVYSCGLNDE 211
Query: 121 GQLGHSFTQ-NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG + N P ++ L F+ I GS SAA+T+ ++Y +G ++ Q P
Sbjct: 212 GQLGQGHNEGNISSPRLVLELEHSFIKKIF-AGSHSAAITDANEIYFFGKSQLGQFLYPQ 270
Query: 180 LPVVQPC 186
L V+ C
Sbjct: 271 L--VRIC 275
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 86/165 (52%), Gaps = 6/165 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV- 77
G G N+ + +V + + + ++CG T + + G L+ G+N+ +LG G +
Sbjct: 2 GLGENKRNSVFYYPRVCSFQIVIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSL 61
Query: 78 -GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMV 136
++P+L+ L +++Q++ G H+ A+ D G++FSWG GQLG + + P +
Sbjct: 62 QNSFQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHYNPQL 121
Query: 137 IEAL----ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ + FVT ++CG + AV + G++ +G+ K QLG
Sbjct: 122 VNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGT 166
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+Y+ G ++ EG+LG +G NE G +S P V L G + +T+ ++
Sbjct: 202 RVYSCGLND-EGQLG----QGHNE-GNISSPRLVLELEHSFIKKIFAGSHSAAITDANEI 255
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDV---RIIQIANGGYHSLALTDDGKVFSWGY 117
+ +G + +LG+ L P LV + + +I+ G + +A+T DGKV+SWG
Sbjct: 256 YFFGKS---QLGQF---------LYPQLVRICQGDVNEISIGNHFGVAVTYDGKVYSWGI 303
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
GQLG + + +P ++E L ++ V CG
Sbjct: 304 NQQGQLGQGDSDVRIIPSLVEPLNEKKVISATCG 337
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 21 GPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW 80
G ++ G P V+ V +S G F + +T +G++++WG N +LG+GD
Sbjct: 259 GKSQLGQFLYPQLVRICQGDVNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGDSDVRI 318
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLAL 106
P L+ L + ++I G + + L
Sbjct: 319 IPSLVEPLNEKKVISATCGENYVICL 344
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++WGR++ G+LGLG N L +P K++A V V ++ G T +TE+G
Sbjct: 149 HVHSWGRNQ-NGQLGLG-----NTEDSL-LPQKIQAFEGVRVKMIAAGAEHTAAVTEDGD 201
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + ++ +++ +A G H++ ++ G ++++G+
Sbjct: 202 LYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSK 261
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH ++ VP +EAL D ++ I+ G + A+ GKLY WG K Q+GV
Sbjct: 262 YGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGV 319
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 93/180 (51%), Gaps = 13/180 (7%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL----PVPVAAVS-CGGFFTMVLT-EE 57
+WGR E +G+LG G +A +P+ + A P VA+V CG T + EE
Sbjct: 43 SWGRGE-DGQLGHG------DAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEE 95
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
QL++WG LG G+ + P+ + L VRI QIA G H LA+T G V SWG
Sbjct: 96 LQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGR 155
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG T++ +P I+A V IA G +AAVTE G LY WG + LG+
Sbjct: 156 NQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 215
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY+WG + GRLG G + + P ++AL V + ++CG + +T G
Sbjct: 97 QLYSWGWGD-FGRLGHG------NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGH 149
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G+ P+ + VR+ IA G H+ A+T+DG ++ WG+G
Sbjct: 150 VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGR 209
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ +P + ++ + + +ACG + V+ G +Y +G +K QLG
Sbjct: 210 YGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLG 266
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + IP KV ++ + V+CG T+ ++ G
Sbjct: 201 DLYGWGWGR-YGNLGLG------DRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGS 253
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ +G + +LG GD P L L D I QI+ G H++AL DGK++ WG+
Sbjct: 254 IYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNK 313
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G ++ P+ + ++ V +ACG + A+TE ++ WG QLG
Sbjct: 314 FGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLG 370
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
Query: 30 IPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P K++AL ++ +S G TM L +G+L+ WG N ++G GD P +
Sbjct: 275 VPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFP 334
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
+ +++Q+A G H+LALT+ VFSWG G GQLGH ++ +P +I+AL+ +
Sbjct: 335 NEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSD 389
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN-- 98
V +S G ++ L G + +WG + +LG GD P +L D +A+
Sbjct: 22 VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 81
Query: 99 --GGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTS 155
G H+ A +D+ +++SWG+G G+LGH + + P I+AL +T IACG S
Sbjct: 82 ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHC 141
Query: 156 AAVTEKGKLYMWGNAKDSQLGV 177
AVT G ++ WG ++ QLG+
Sbjct: 142 LAVTVAGHVHSWGRNQNGQLGL 163
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 83 KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD 142
+ +P + ++ I+ G HS+AL G V SWG G GQLGH +++ VP V+ A D
Sbjct: 12 EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFD 71
Query: 143 E----FVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV-PGLPVVQPCPVE 189
+ + + CG T+A E+ +LY WG +LG V P P++
Sbjct: 72 DAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQ 124
>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Acyrthosiphon pisum]
Length = 1053
Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 61/178 (34%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG +E G G +S P+ V +L +P++ ++CGG+ + V+++ G
Sbjct: 158 ELYTWGSNE------FGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGA 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG + P L + V++ IA G S+ LT DG VF+ G G
Sbjct: 212 VFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGM 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH N+ VP + L VT + CG T V KG++Y +G QLG
Sbjct: 272 YGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLG 329
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 21 GPNEAGGLS---IPSKVKALP----VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELG- 72
G N+ G L +K++ +P + + +V+CG +M L E GQL+ WG++S +LG
Sbjct: 60 GSNDFGQLGHDGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGL 119
Query: 73 RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG-HGQLGHSFTQNQ 131
D +KPK++ L + ++QI+ G H +ALT+ G++++WG N
Sbjct: 120 ETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNV 179
Query: 132 KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
P ++ +L ++ IACGG S V++ G ++ WG QLG+
Sbjct: 180 SKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGI 225
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 12/172 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
+Y WG + G LGLG G E LS V V + +V+CG T+ +TE+GQL
Sbjct: 1 MYCWG-NTINGELGLG---GIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQL 56
Query: 61 WNWGANSNYELGRGDRVGGWKPKL--LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ G+N +LG G + KL +P + + + +A G HS+AL + G++++WG
Sbjct: 57 YACGSNDFGQLGH----DGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSD 112
Query: 119 GHGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
GQLG + Q P +++ LA + I+CG A+T G+LY WG+
Sbjct: 113 SCGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGS 164
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 9/123 (7%)
Query: 60 LWNWGANSNYELGRGDRVGGW--KPKLLPNLVDVRIIQ-IANGGYHSLALTDDGKVFSWG 116
++ WG N ELG G + P+ + N V I+ +A G H+LA+T+DG++++ G
Sbjct: 1 MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 60
Query: 117 YGGHGQLGHS--FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
GQLGH T+ QK+P V E+L +T +ACG + S A+ E G+LY WG+ Q
Sbjct: 61 SNDFGQLGHDGCRTKLQKIPGV-ESLV---MTSVACGEAHSMALNEWGQLYTWGSDSCGQ 116
Query: 175 LGV 177
LG+
Sbjct: 117 LGL 119
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WG+++ G+LG+ N LS P+++K + V V ++ G F++ LT +G +
Sbjct: 212 VFGWGKNDF-GQLGI------NSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGV 264
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA +LG G P+ + L+ + Q+ G H+L L G+V+S+G G
Sbjct: 265 FTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGS 324
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG + N P ++
Sbjct: 325 VGQLGTKSSINSNTPQLV 342
Score = 35.8 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI---ACGGSTSAAVTEKGKLYMWG 168
++ WG +G+LG + + E + E V +I ACG + + AVTE G+LY G
Sbjct: 1 MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 60
Query: 169 NAKDSQLGVPG 179
+ QLG G
Sbjct: 61 SNDFGQLGHDG 71
>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
carolinensis]
Length = 1081
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 96/185 (51%), Gaps = 16/185 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-----VAAVSCGGFFTMVLTE 56
LY WG G+LGLG G G +S P + P V V+CG T++L +
Sbjct: 2 LYCWGEGSA-GQLGLGKGEG------VSGPVPFRPGPRAPADQAVVLVACGERHTLLLRD 54
Query: 57 EGQLWNWGANSNYELGR----GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
+G + + G NS +LGR G + P+L+ L +++ ++ G HSLA+ + G+V
Sbjct: 55 DGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRV 114
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+SWG G GQLG ++ +P I AL+ V +ACG S A+T G+++ WG
Sbjct: 115 YSWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIH 174
Query: 173 SQLGV 177
QLG+
Sbjct: 175 GQLGL 179
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 93/174 (53%), Gaps = 8/174 (4%)
Query: 8 DEGEGRLG--LGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQLWNWG 64
D G+LG L G+ G P ++AL V VSCG ++ + +G++++WG
Sbjct: 63 DNSRGQLGRRLPSGQEKRSYG----PELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWG 118
Query: 65 ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
A + +LG G+ PK + L ++IQ+A G HS+ALT+DG++FSWG HGQLG
Sbjct: 119 AGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQLG 178
Query: 125 H-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+Q P + AL + +A GG+ S A++ G +Y WG QLG+
Sbjct: 179 LGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGL 232
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 92/181 (50%), Gaps = 12/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+Y+WG G+LG G E G IP + AL V V+CG ++ LT +G+
Sbjct: 113 RVYSWGAGTF-GQLGTG------ELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGR 165
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG N + +LG G + P+ + L + + Q+A GG HS AL+ G V+ WG
Sbjct: 166 IFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRN 225
Query: 119 GHGQLGHSFTQNQK---VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
QLG S + ++ P I AL V ++CG +A +T+ G +Y +G+ QL
Sbjct: 226 NAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQL 285
Query: 176 G 176
G
Sbjct: 286 G 286
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 12/122 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+Y WGR+ +LGL + P E + P + AL + VA VSCG T VLT+ G +
Sbjct: 219 VYGWGRNNAH-QLGLSQAK-PKEQ--IFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSV 274
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLV---DVRIIQIANGGYHSLA-LTDDGKVFSWG 116
+ +G +S +LGR PK P V D + +A G YH+L ++ G++ S+G
Sbjct: 275 YTFGDDSAGQLGRN---SSSSPKFGPQKVEWIDGPVSLLACGSYHTLVRISTSGQLLSFG 331
Query: 117 YG 118
G
Sbjct: 332 RG 333
>gi|428164909|gb|EKX33919.1| hypothetical protein GUITHDRAFT_166344 [Guillardia theta CCMP2712]
Length = 784
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 77/130 (59%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
G F + L + G++W+WG N +LG GD +P + + + +++A G YHSL L
Sbjct: 225 GDFHVIALNDLGEVWSWGNNVEGQLGVGDLSQRSQPAKVVYMDGLNTVKVAAGSYHSLVL 284
Query: 107 TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
TD G+V+S G +GQLG ++K P +I+ LA + ++ IACG S A+++ G+++
Sbjct: 285 TDFGQVYSMGLNANGQLGLGDYSSRKAPTLIKYLATKNISSIACGDYASYAISDAGEVFA 344
Query: 167 WGNAKDSQLG 176
WG+ QLG
Sbjct: 345 WGDNSFGQLG 354
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 10/180 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG + EG+LG+G + S P+KV + + V+ G + ++VLT+ GQ
Sbjct: 237 EVWSWGNNV-EGQLGVG------DLSQRSQPAKVVYMDGLNTVKVAAGSYHSLVLTDFGQ 289
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++ G N+N +LG GD P L+ L I IA G Y S A++D G+VF+WG
Sbjct: 290 VYSMGLNANGQLGLGDYSSRKAPTLIKYLATKNISSIACGDYASYAISDAGEVFAWGDNS 349
Query: 120 HGQLGHSFTQNQKVPMVIEALADE--FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG S P +I +L ++ V + G T A+ E G +Y +GN LG+
Sbjct: 350 FGQLGQSAAVTYNEPSLIPSLKNDGANVYKVFGGQRTIFAIDESGIVYAFGNNDYGMLGL 409
Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 81/195 (41%), Gaps = 42/195 (21%)
Query: 2 LYTWGRDEGEGRLGLGP---GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
+YTWGR+ +G+LGLGP P + KA P P + V C + +
Sbjct: 86 VYTWGRNS-KGQLGLGPIWTSLSPQAV-------QWKACPEPNSWV-CNPSLCKPVCDAS 136
Query: 59 QLWNWG-ANSNYELGRGDRVGGWKPKLLPNLV-----DVRIIQIANGGYHSLALTD---- 108
+ ++G ANS +++ D+ + ++V +I+Q + LT
Sbjct: 137 KCTSYGSANSYWKVLGVDKASDMQCMKPQDVVWGSASQPQIVQTVASVDSTFVLTKQEML 196
Query: 109 ---DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
DGK F + VPM+I ++ D +A G A+ + G+++
Sbjct: 197 ARPDGKYF-----------------RSVPMLINSIQDLHFLELAAGDFHVIALNDLGEVW 239
Query: 166 MWGNAKDSQLGVPGL 180
WGN + QLGV L
Sbjct: 240 SWGNNVEGQLGVGDL 254
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANG 99
+A +S FF +V + ++ G N +LG GD + L+ + + + R +A G
Sbjct: 12 IACLSLACFFDVVAAND--VYVVGYNDWGQLGLGDYLERTTETLIDSKLPLDRTYGLAAG 69
Query: 100 GYHSLALTD----DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTS 155
YHS+AL D G V++WG GQLG P ++ A C S
Sbjct: 70 LYHSVALGDTSSTQGLVYTWGRNSKGQLGLGPIWTSLSPQAVQWKACPEPNSWVCNPSLC 129
Query: 156 AAVTEKGKLYMWGNAK 171
V + K +G+A
Sbjct: 130 KPVCDASKCTSYGSAN 145
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++ WG D G+LG NE S+ +K V V G + E G +
Sbjct: 341 EVFAWG-DNSFGQLGQSAAVTYNEP---SLIPSLKNDGANVYKVFGGQRTIFAIDESGIV 396
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
+ +G N LG GD+ P + + V + IA+G YH++A T
Sbjct: 397 YAFGNNDYGMLGLGDKTTRKFPTKISSFVGANVYVIASGAYHTIAAT 443
>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
Length = 1016
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG P ++ AL + VA VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRKGTPRGEQ-------PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L ++IIQ+A G YHS+AL++DG+VFSWG HGQ
Sbjct: 102 ASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--L 180
LG F +Q P + +L + +A GG S A++ G + WG+ QL + G
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNA 220
Query: 181 PVVQPCPV 188
PV + PV
Sbjct: 221 PVQRYKPV 228
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 99/180 (55%), Gaps = 11/180 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG EG+LG+G + IP K+K L + + V+CG + ++ L+E+GQ+
Sbjct: 96 VFAWGA-ASEGQLGIGEFKETT-----FIPKKIKTLAGIKIIQVACGHYHSVALSEDGQV 149
Query: 61 WNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG NS+ +LG G P+ + +L + + Q+A GG+HS AL+ G F WG
Sbjct: 150 FSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNS 209
Query: 120 HGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQL G++ + P+ I AL V I+CG +A +T+ GK++ +G+ QLG
Sbjct: 210 AGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG 269
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 96/174 (55%), Gaps = 12/174 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG + G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGTN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L G V +KP + L + ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGN 169
+GQLGH T ++ P ++E + + V+ I CG T A + G++ +G
Sbjct: 262 DNSYGQLGHDPTAEKRGPQLVERI-EGLVSQIDCGSDHTLAYIYTTGQVVSFGR 314
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
G +++L +G + + G NS +LGR G +P+ +P L + + ++ G HSLA+
Sbjct: 31 GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90
Query: 107 TDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
G+VF+WG GQLG F + +P I+ LA + +ACG S A++E G+++
Sbjct: 91 CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVF 150
Query: 166 MWGNAKDSQLGV 177
WG QLG+
Sbjct: 151 SWGTNSHGQLGL 162
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
++Q A+G +HSL L DG V S G GQLG T + P I AL V ++CG
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGK 84
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
S AV KG+++ WG A + QLG+
Sbjct: 85 EHSLAVCHKGRVFAWGAASEGQLGI 109
>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
Length = 389
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 90/153 (58%), Gaps = 2/153 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 97 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 156
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 157 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 216
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLGVPG 179
ACG + + +T+ ++ WG+ +LG G
Sbjct: 217 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 249
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GRLG +++ P V+AL V ++CG T+ LT++
Sbjct: 179 DLYTWGKGR-YGRLG------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 231
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 232 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 291
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 292 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 350
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 234 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 286
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 287 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 346
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 347 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 383
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 20 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 79
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIA--CGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 80 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 139
Query: 176 G 176
G
Sbjct: 140 G 140
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 32/71 (45%)
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
+ G +L G ++ WG+ GQLG KVP EALA + G T A
Sbjct: 8 SSGRENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA 67
Query: 158 VTEKGKLYMWG 168
VT GKLY G
Sbjct: 68 VTADGKLYATG 78
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
EL+TWG + +G+LG G G + S P +V+ P+ +SCGG ++ + + Q
Sbjct: 1052 ELFTWG-NNSQGQLGHGLNVGKYQ----STPRRVETFKSSPIIMISCGGEHSVAVDQSFQ 1106
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVD-----VRIIQIANGGYHSLALTDDGKVFS 114
+++WG++ +LG G P+ LP ++ +++ IA G H++ L G +F+
Sbjct: 1107 IYSWGSSRYGQLGHGVLT----PQNLPKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFT 1162
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIE-----ALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+G+ GQLG +N+ VPM IE + E +T IA G S S + G +Y WG
Sbjct: 1163 FGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNGDIYSWGA 1222
Query: 170 AKDSQLG 176
QLG
Sbjct: 1223 NSKGQLG 1229
Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/191 (27%), Positives = 103/191 (53%), Gaps = 19/191 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV------PVAAVSCGGFFTMVL 54
+L+T+G ++ G+LGLG + N A +P +++ + + A++ G +++
Sbjct: 1159 DLFTFGWND-SGQLGLGNFK--NRA----VPMRIETSEIVGIHGERITAIAAGHSHSIMC 1211
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
+ G +++WGANS +LG G+ +PK + L II+I+ G +H++A+++ V+
Sbjct: 1212 LDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYC 1271
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT------EKGKLYMWG 168
WG G H LG+ +N+ P +IE ++ + + CG +A VT ++G +Y+ G
Sbjct: 1272 WGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICG 1331
Query: 169 NAKDSQLGVPG 179
+ +LG G
Sbjct: 1332 GGEHGKLGTGG 1342
Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGG 100
+V+CG V++ +G+L+ WG NS +LG G VG ++ P+ + II I+ GG
Sbjct: 1036 SVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGG 1095
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL-ADEFVTHIACGGSTSAAVT 159
HS+A+ +++SWG +GQLGH Q +P IE + V IA G + + +
Sbjct: 1096 EHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVLK 1155
Query: 160 EKGKLYMWGNAKDSQLGV 177
+ G L+ +G QLG+
Sbjct: 1156 KSGDLFTFGWNDSGQLGL 1173
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 19/188 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + +G+LG G N L P ++ L P+ +SCG F T+ ++E
Sbjct: 1216 DIYSWGANS-KGQLGHG-----NIEKSLR-PKQIDELKGKPIIKISCGHFHTVAISELNS 1268
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT------DDGKVF 113
++ WG + LG G PK++ ++ +I ++ G YH+ +T D G V+
Sbjct: 1269 VYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVY 1328
Query: 114 SWGYGGHGQLG-----HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G G HG+LG + ++ P VI +L + + G SA +T G LY WG
Sbjct: 1329 ICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALYTWG 1388
Query: 169 NAKDSQLG 176
Q+G
Sbjct: 1389 YGNFGQIG 1396
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLT------ 55
+Y WG+ E + LG G NE I + + V CG + T +T
Sbjct: 1269 VYCWGQGE---HMCLGNGSNKNELSPKMIEFFINK---KIEKVVCGLYHTATVTAAENGS 1322
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWK--------PKLLPNLVDVRIIQIANGGYHSLALT 107
+ G ++ G + +LG G G K P ++P+L + I+ ++G S +T
Sbjct: 1323 DRGNVYICGGGEHGKLGTG---GDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIIT 1379
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
++G +++WGYG GQ+G+ T++ +P I +L D+
Sbjct: 1380 NNGALYTWGYGNFGQIGNGKTEDMWLPTKI-SLNDQ 1414
>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
Length = 1127
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
+LYTWG +G GL G IP KV L + V+ VSCG + T ++T G
Sbjct: 380 DLYTWG--DGAKSSGL---LGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTALITSAG 434
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
+L+ +G + LG GDR G P+ + ++ +++A G +H+ A+ +
Sbjct: 435 RLFTFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAAVVELMSGLDSRPS 494
Query: 109 ---DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
G +F+WG G G+LGH + + P I AL D+ + +AC + + A+T G++Y
Sbjct: 495 DAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVALTTTGRVY 554
Query: 166 MWGNAKDSQLGVPGLPVVQPCPVE 189
G+ QLG P + P VE
Sbjct: 555 TMGSNVYGQLGCPLANGMSPICVE 578
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V +SCG M++T++G+ ++WG + LG G PKL+ N + + IA G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGE 369
Query: 101 YHSLALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAA 157
YHS A+T G +++WG G G LGH + +P + L + V+H++CG +A
Sbjct: 370 YHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTAL 429
Query: 158 VTEKGKLYMWGNAKDSQLG 176
+T G+L+ +G+ LG
Sbjct: 430 ITSAGRLFTFGDGTFGALG 448
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 92/176 (52%), Gaps = 14/176 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
L+TWG D +G+LG G + P A P + AL + V+C T+ LT G++
Sbjct: 501 LFTWG-DGDKGKLGHGDNK-PRLA-----PQCITALVDKSFSEVACSYAMTVALTTTGRV 553
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ G+N +LG G P + + LVD + +I+ G +H LT +V++WG G
Sbjct: 554 YTMGSNVYGQLG-CPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYTWGKGE 612
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+GQLGH +N+ P +++ L D+ V I CG + SAA+ ++ W + D+ +
Sbjct: 613 NGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSNFSAAIC----VHNWALSADNSI 664
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 74 GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV 133
G R+ PK L + V + + I+ G H++ +T G+ FSWG G+LGH +
Sbjct: 291 GTRIDANTPKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSH 350
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN-AKDSQL 175
P +I+ V IACG S AVT G LY WG+ AK S L
Sbjct: 351 PKLIKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGL 393
>gi|340368103|ref|XP_003382592.1| PREDICTED: hypothetical protein LOC100632986 [Amphimedon
queenslandica]
Length = 2287
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
+ ++SCG ++ L+ +G L+ WG NS +LG KP +L ++Q A G
Sbjct: 1329 ITSISCGVKHSLALSSDGSLYAWGDNSEGQLGLKTLQPICKPSILSLPFGRPVVQAACGD 1388
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVT 159
+H+LALT DG+VFSWG QLGHS ++ + P I L V + CG + SAA+T
Sbjct: 1389 HHTLALTQDGRVFSWGKNTTSQLGHSKGLSRVLAPTQITHLISTPVVKLICGSNHSAALT 1448
Query: 160 EKGKLYMWGNAKDSQLG 176
G +++WG+ + +Q G
Sbjct: 1449 VSGGVFLWGDNRRAQCG 1465
Score = 89.0 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 14/193 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LY WG D EG+LGL + + LS+P PV +CG T+ LT++G+++
Sbjct: 1348 LYAWG-DNSEGQLGLKTLQPICKPSILSLP-----FGRPVVQAACGDHHTLALTQDGRVF 1401
Query: 62 NWGANSNYELGRG---DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+WG N+ +LG RV P + +L+ ++++ G HS ALT G VF WG
Sbjct: 1402 SWGKNTTSQLGHSKGLSRV--LAPTQITHLISTPVVKLICGSNHSAALTVSGGVFLWGDN 1459
Query: 119 GHGQLGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL-- 175
Q G T P + E + V+H+ACG + + G +Y G+ + QL
Sbjct: 1460 RRAQCGFGHVTTKISYPTLNEFMGRYAVSHVACGTDHTVFQVQSGHIYTVGSNEYGQLGR 1519
Query: 176 GVPGLPVVQPCPV 188
G G +P P+
Sbjct: 1520 GARGAVYSRPAPI 1532
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 45/87 (51%)
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
D I I+ G HSLAL+ DG +++WG GQLG Q P ++ V A
Sbjct: 1326 DTIITSISCGVKHSLALSSDGSLYAWGDNSEGQLGLKTLQPICKPSILSLPFGRPVVQAA 1385
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLG 176
CG + A+T+ G+++ WG SQLG
Sbjct: 1386 CGDHHTLALTQDGRVFSWGKNTTSQLG 1412
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 16/90 (17%)
Query: 112 VFSWGYGGHGQLGHSFTQ-------------NQKVPMV--IEALADEFVTHIACGGSTSA 156
+F WG G LG + ++K+ + I+ D +T I+CG S
Sbjct: 1281 MFCWGEAHDGALGLDVKEKCVMEARPNTAFGDKKIKYIAHIDTFDDTIITSISCGVKHSL 1340
Query: 157 AVTEKGKLYMWGNAKDSQLGVPGL-PVVQP 185
A++ G LY WG+ + QLG+ L P+ +P
Sbjct: 1341 ALSSDGSLYAWGDNSEGQLGLKTLQPICKP 1370
>gi|281210791|gb|EFA84957.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1176
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 12 GRLGLGP---GRGPNEAGGLSIPSKV------KALPVP---VAAVSCGGFFTMVLTEEGQ 59
G +G GP R P +S P ++ +P P + VS G + ++LTE G
Sbjct: 224 GPIGAGPEGEQRPP-----ISTPMRIPLDFLYHGVPTPGSRIKQVSIGNYHIVLLTEAGN 278
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII-QIANGGYHSLALTDDGKVFSWGYG 118
+W WG+NS+ +LG G V +P V+++ I QIA G H+ A+ + G+++ WG
Sbjct: 279 IWTWGSNSHGQLGIGLDVH----SNIPRQVELKCIKQIATGVKHTAAINEWGELYMWGIN 334
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
HG+LG T ++ P + L E V+ ++C + S TE GKLY WG D +
Sbjct: 335 EHGELGLGDTGIRRSPTRVAKLKSELVSLVSCSSTHSVCYTESGKLYSWGQC-DKFGKIQ 393
Query: 179 GLPVVQP 185
+P + P
Sbjct: 394 TVPTIVP 400
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 35/137 (25%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
ELY WG +E G LGLG + G P++V L V+ VSC ++ TE G+
Sbjct: 327 ELYMWGINE-HGELGLG------DTGIRRSPTRVAKLKSELVSLVSCSSTHSVCYTESGK 379
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-----------------IIQIANGGYH 102
L++WG + D+ G K + +P +V + I IA G +
Sbjct: 380 LYSWG--------QCDKFG--KIQTVPTIVPIHNYTESDAEGGGCGGGGAIRAIACGEWL 429
Query: 103 SLALTDDGKVFSWGYGG 119
+ ALT G+VF W G
Sbjct: 430 TAALTQLGEVFLWEVSG 446
>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1132
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 4/171 (2%)
Query: 10 GEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGG-FFTMVLTEEGQLWNWGANS 67
GEG G LG G +E + I ++++ + A S GG T+ + + G++++WG
Sbjct: 344 GEGTYGRLGQGTSDDEHSLVPI-TELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGD 402
Query: 68 NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF 127
+LG G+ KPK + L ++Q + G HS LT DGKVF++G G +G LG
Sbjct: 403 YGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGG 462
Query: 128 TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG-KLYMWGNAKDSQLGV 177
QK P +I +L +E ++ IACG + A+ G KLY WG+ + +LG+
Sbjct: 463 NSPQKTPQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLGL 513
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 3/142 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN-- 98
V + CG T +L G ++ G + LG+G + L IIQ+A
Sbjct: 321 VREIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSL 380
Query: 99 -GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
G H+LA+ D G+VFSWG G +G+LGH ++ Q+ P I AL E V +CG SA
Sbjct: 381 GGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAV 440
Query: 158 VTEKGKLYMWGNAKDSQLGVPG 179
+T+ GK++ +G + LG G
Sbjct: 441 LTKDGKVFTFGQGQYGILGDGG 462
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 25/186 (13%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEG 58
+LY WG +GE G+LGLG SIP+ V + V + ++CG F++VL G
Sbjct: 499 KLYAWG--DGEFGKLGLG------STSVRSIPNLVDSYRNVCLKKIACGSKFSIVLATNG 550
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L+ +G + D + P+++ +L+ II IA G + LAL + G ++ WG
Sbjct: 551 YLYTFGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYILALDNSGNIWGWGTN 610
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS----- 173
GQLG T +P ++ + +T ++ G + AA W N++
Sbjct: 611 EEGQLGIGTTNPHYLPQLVCTFSGTNITRLSAGTTHCAA---------WSNSQSPSSNTQ 661
Query: 174 -QLGVP 178
Q+G P
Sbjct: 662 LQIGTP 667
Score = 43.5 bits (101), Expect = 0.037, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG+N + EL +P L+ VR +I G + L +G VF+ G G
Sbjct: 290 VYVWGSNIHGELPGLQGKTCLQPNLVSTFKQVR--EIVCGQNCTFLLQTNGSVFACGEGT 347
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIAC---GGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + ++ + I L + +A G + AV + G+++ WG+ +LG
Sbjct: 348 YGRLGQGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLG 407
>gi|440800739|gb|ELR21774.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 292
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
+ TWG G GRLG G I LP VA +SCG +T VLT G++
Sbjct: 87 VLTWGNGTG-GRLGTGD----------EISRTQPVLPEHKVAQISCGSDWTAVLTLAGKV 135
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ +G S +LG G+ PKL+ L R++ ++ G H AL +G VF+WG GG+
Sbjct: 136 FTFGVGSYGKLGHGNDSNQLVPKLVEELDTERVVSLSCGADHMAALNIEGDVFTWGCGGN 195
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G+LGH ++ K P++++ + + CGG T G+LYMWG
Sbjct: 196 GRLGHGSERDSKKPVLVKGMNGLVALTVECGGYHMGVTTLDGELYMWG 243
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLGLG N IP ++ + V VSCG + V TE + WG + L
Sbjct: 46 GRLGLGNENCCN------IPKRIN-IKKKVVGVSCGDEHSAVFTEANTVLTWGNGTGGRL 98
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G GD + +P +LP + ++ QI+ G + LT GKVF++G G +G+LGH NQ
Sbjct: 99 GTGDEISRTQP-VLP---EHKVAQISCGSDWTAVLTLAGKVFTFGVGSYGKLGHGNDSNQ 154
Query: 132 KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
VP ++E L E V ++CG AA+ +G ++ WG + +LG
Sbjct: 155 LVPKLVEELDTERVVSLSCGADHMAALNIEGDVFTWGCGGNGRLG 199
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Query: 16 LGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG 74
LG G N+ +P V+ L V ++SCG L EG ++ WG N LG G
Sbjct: 146 LGHGNDSNQL----VPKLVEELDTERVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHG 201
Query: 75 DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKV 133
KP L+ + + + + GGYH T DG+++ WG+ +GQ G +NQ
Sbjct: 202 SERDSKKPVLVKGMNGLVALTVECGGYHMGVTTLDGELYMWGWNVYGQCGLGLHVENQLT 261
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTEK 161
P+++E L + V +ACG S + A+
Sbjct: 262 PVLVEQLRGKRVLMVACGESHTMALVSN 289
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 33/99 (33%)
Query: 112 VFSWGYGGHGQLGHSFTQN----------QKVPMVIEALAD------------------- 142
VFSWG G GQLGH +N +K P VI A+ +
Sbjct: 2 VFSWGLGNGGQLGHHDEENGSFPREVSALRKKPSVIIAVGNGESGRLGLGNENCCNIPKR 61
Query: 143 ----EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ V ++CG SA TE + WGN +LG
Sbjct: 62 INIKKKVVGVSCGDEHSAVFTEANTVLTWGNGTGGRLGT 100
>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL + +P +V + PV+ +SCG + + +T +G+L+
Sbjct: 161 LFMWG-DNSEGQIGL------KNVSNVCVPQQV-TIGKPVSWISCGYYHSAFVTTDGELY 212
Query: 62 NWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G N +LG +++ G P+L+ + + ++IQ+A GG H++ LT++ V+++G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P VIE + D+ +++I+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTEGGN 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD ++ + +I Q++ G S ALT+DG++F WG
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + V+ I+CG SA VT G+LY++G ++ +LG+P
Sbjct: 168 SEGQIGLKNVSNVCVPQ--QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLP 225
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VPV +SCG + V+T +L+ +G+N+ +LG G + KP + L ++ A
Sbjct: 36 VPVH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAAC 94
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAA 157
G H+L T+ G V++ G GQLG T+ + VI E + ++ G +TSAA
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
+TE G+L+MWG+ + Q+G+
Sbjct: 155 LTEDGRLFMWGDNSEGQIGL 174
>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
Length = 815
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL + +P +V + PV+ +SCG + + +T +G+L+
Sbjct: 161 LFMWG-DNSEGQIGL------KNVSNVCVPQQV-TIGKPVSWISCGYYHSAFVTTDGELY 212
Query: 62 NWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G N +LG +++ G P+L+ + + ++IQ+A GG H++ LT++ V+++G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P VIE + D+ +++I+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGN 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD ++ + +I Q++ G S ALT+DG++F WG
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + V+ I+CG SA VT G+LY++G ++ +LG+P
Sbjct: 168 SEGQIGLKNVSNVCVPQ--QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLP 225
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VPV +SCG + V+T +L+ +G+N+ +LG G + KP + L ++ A
Sbjct: 36 VPVH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAAC 94
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAA 157
G H+L T+ G V++ G GQLG T+ + VI E + ++ G +TSAA
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
+TE G+L+MWG+ + Q+G+
Sbjct: 155 LTEDGRLFMWGDNSEGQIGL 174
>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
sapiens]
gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
Length = 815
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL + +P +V + PV+ +SCG + + +T +G+L+
Sbjct: 161 LFMWG-DNSEGQIGL------KNVSNVCVPQQV-TIGKPVSWISCGYYHSAFVTTDGELY 212
Query: 62 NWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G N +LG +++ G P+L+ + + ++IQ+A GG H++ LT++ V+++G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P VIE + D+ +++I+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGN 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD ++ + +I Q++ G S ALT+DG++F WG
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + V+ I+CG SA VT G+LY++G ++ +LG+P
Sbjct: 168 SEGQIGLKNVSNVCVPQ--QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLP 225
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VPV +SCG + V+T +L+ +G+N+ +LG G + KP + L ++ A
Sbjct: 36 VPVH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAAC 94
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAA 157
G H+L T+ G V++ G GQLG T+ + VI E + ++ G +TSAA
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
+TE G+L+MWG+ + Q+G+
Sbjct: 155 LTEDGRLFMWGDNSEGQIGL 174
>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
latipes]
Length = 531
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 94/168 (55%), Gaps = 4/168 (2%)
Query: 14 LGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYEL 71
L G ++ +P K+ L + ++S G G ++ TE+G+L+ WG N +L
Sbjct: 48 LNCSNCLGTGDSQSTIVPKKLDFLNGRKIVSLSYGSGPHVLMATEDGELFAWGHNGYSQL 107
Query: 72 GRGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
G G G P L+ N+++ +++++A G +HS+ALTD G+V++WGY GQ+G T N
Sbjct: 108 GNGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTAN 167
Query: 131 QKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
Q P V L ++ I CG ++S AV + G++Y WG + QLG+
Sbjct: 168 QPTPRRVSSCLQNKVAVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLGL 215
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 6/177 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG + G +LG G G + L V V+CG +M LT+ G++
Sbjct: 95 ELFAWGHN-GYSQLG----NGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMALTDSGEV 149
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI-IQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N+ ++G G P+ + + + ++ + I G SLA+ D+G+V+ WGY G
Sbjct: 150 YAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVGIVCGQTSSLAVVDNGEVYGWGYNG 209
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + AL V I CG + A++++G LY WG+ QLG
Sbjct: 210 NGQLGLGNNGNQLTPCRLVALQGLCVLQIVCGYAHCLALSDEGVLYAWGSNTYGQLG 266
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVPVAA-VSCGGFFTMVLTEEG 58
E+Y WG + G++G G P +V + L VA + CG ++ + + G
Sbjct: 148 EVYAWGYNNC-GQVGSGS------TANQPTPRRVSSCLQNKVAVGIVCGQTSSLAVVDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P L L + ++QI G H LAL+D+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVLQIVCGYAHCLALSDEGVLYAWGSN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P+ I + + V AC + TSAA T+ G++YMWG + + +
Sbjct: 261 TYGQLGTGNKSNQLSPVQIMSEKERIVEVAACHSTHTSAAKTQSGQVYMWGQCRGQSIVL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDGKV 112
+T + +++ G N + LG GD PK L L +I+ ++ G G H L T+DG++
Sbjct: 37 VTHDDEVFVLGLNCSNCLGTGDSQSTIVPKKLDFLNGRKIVSLSYGSGPHVLMATEDGEL 96
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
F+WG+ G+ QLG+ T P+++ A + ++ V +ACG S A+T+ G++Y WG
Sbjct: 97 FAWGHNGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMALTDSGEVYAWGYNN 156
Query: 172 DSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 157 CGQVG-SGSTANQPTP 171
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 4/162 (2%)
Query: 18 PGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR 76
PG N G ++ P + + + V+CGG ++ L E+G+++ G NS +LG +R
Sbjct: 12 PGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGH-ER 70
Query: 77 VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPM 135
G KP+ + L D I+ +A G HSLAL+D G++FSWG G GQLG T++ VP
Sbjct: 71 EGN-KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPR 129
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+I+ L + + ++CG A+ G+ + WG QLG+
Sbjct: 130 LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGL-----MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG E + P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLG-----KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGVN-SKGQLGHEREGNKPEQIGALA--------DQHIVHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
>gi|270015228|gb|EFA11676.1| hypothetical protein TcasGA2_TC008540 [Tribolium castaneum]
Length = 835
Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 13/178 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL---PVPVAAVSCGGFFTMVLTEEG 58
LYT G G LGLGP + S P V+ L V V +VSCG T+ LT+ G
Sbjct: 378 LYTMGVSS-SGCLGLGPLLTQS-----SPPKLVQTLFDLKVKVLSVSCGRKHTLALTDYG 431
Query: 59 QLWNWGANSNYELGRGDRVG-GWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG+N+ +LG G + P+++ NL +++Q++ G YH++AL+ G+V++WG+
Sbjct: 432 -VYAWGSNTYGQLGLGPLIQESPYPQIITNLAFKKMVQVSAGQYHTIALSSSGEVYTWGW 490
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G HGQLGH N P ++ V +A G + S +T +GKL+ +G+ QL
Sbjct: 491 GIHGQLGHGDCDNIYYPKLLP--FQHKVVQVAAGHAHSLILTREGKLFGFGSNVFGQL 546
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 19/175 (10%)
Query: 2 LYTWGRDEGEGRLGLGP----GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
+Y WG + G+LGLGP P L+ V+ VS G + T+ L+
Sbjct: 432 VYAWGSNT-YGQLGLGPLIQESPYPQIITNLAFKKMVQ--------VSAGQYHTIALSSS 482
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG + +LG GD + PKLLP +++Q+A G HSL LT +GK+F +G
Sbjct: 483 GEVYTWGWGIHGQLGHGDCDNIYYPKLLP--FQHKVVQVAAGHAHSLILTREGKLFGFGS 540
Query: 118 GGHGQLGHSFTQNQKV--PMVIEALADEF--VTHIACGGSTSAAVTEKGKLYMWG 168
GQL + + K P++I + D + + IA G + AV ++Y WG
Sbjct: 541 NVFGQLEYCQLDSNKSTRPVLILIMPDIYTPIEKIATGYFHNIAVRADQEVYTWG 595
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG-GWKPKLLPNLVD--VRIIQIANGG 100
+SCG F + L+ G +S+ LG G + PKL+ L D V+++ ++ G
Sbjct: 363 LSCG-FEHAAVVRNSCLYTMGVSSSGCLGLGPLLTQSSPPKLVQTLFDLKVKVLSVSCGR 421
Query: 101 YHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
H+LALTD G V++WG +GQLG Q P +I LA + + ++ G + A++
Sbjct: 422 KHTLALTDYG-VYAWGSNTYGQLGLGPLIQESPYPQIITNLAFKKMVQVSAGQYHTIALS 480
Query: 160 EKGKLYMWGNAKDSQLG 176
G++Y WG QLG
Sbjct: 481 SSGEVYTWGWGIHGQLG 497
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 30/199 (15%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV--PVAAVSCGGFFTMVLTEEG 58
E+YTWG G+LG G + + P K LP V V+ G +++LT EG
Sbjct: 484 EVYTWGWGI-HGQLGHG------DCDNIYYP---KLLPFQHKVVQVAAGHAHSLILTREG 533
Query: 59 QLWNWGAN--SNYELGRGDRVGGWKPKLLPNLVDVR--IIQIANGGYHSLALTDDGKVFS 114
+L+ +G+N E + D +P L+ + D+ I +IA G +H++A+ D +V++
Sbjct: 534 KLFGFGSNVFGQLEYCQLDSNKSTRPVLILIMPDIYTPIEKIATGYFHNIAVRADQEVYT 593
Query: 115 WGYGGHGQ--LGHSFTQNQKVPMVIEALADEFVTHIACGGSTS-----------AAVTEK 161
WG L Q Q + + + HI GG+ + +
Sbjct: 594 WGASPQEVRILQSKNLQKQNGLSLKGPDSWKASVHIYSGGNKKPIEQVVVGYRHSVILHN 653
Query: 162 GKLYMWGNAKDSQLGVPGL 180
GKL +WG KD +L P L
Sbjct: 654 GKL-LWGKNKDDELSPPKL 671
>gi|356568831|ref|XP_003552611.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Glycine max]
Length = 474
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL----PNLVD-----V 91
+ VSCG + L+EEG L WG N +LGRG G + + +D V
Sbjct: 167 IREVSCGAVHVVALSEEGLLQAWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPELV 226
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ---NQKVPMVIEALADEFVTHI 148
+I +++ G YH+ ++D G+V++WG G GQLGHS Q + +P + L F+ +
Sbjct: 227 KIAKVSCGEYHTAVISDKGEVYTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDV 286
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
ACGG + +VT+ G LY WG + QLG+
Sbjct: 287 ACGGVHTCSVTQGGALYAWGGGRSGQLGL 315
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 17/133 (12%)
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLV-------DVRIIQIANGGYHSLALTDDGK 111
++ WG N + + GR + + PK LP + + R + +A G H+ A+ DG
Sbjct: 21 IYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNARWLDVACGREHTAAIASDGS 80
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE---------KG 162
+F+WG GQLG + +K+P ++ L EFV ++CG SA + E
Sbjct: 81 LFTWGANDFGQLGDGTEERRKLPEKVKQLESEFVKSVSCGAHCSACIAEPHENDGTISTR 140
Query: 163 KLYMWGNAKDSQL 175
+L++WG + S L
Sbjct: 141 RLWVWGQNQGSNL 153
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 26/188 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-----VPVAAVSCGGFFTMVLTE 56
L WG +E G+LG G G I S K L V +A VSCG + T V+++
Sbjct: 186 LQAWGYNE-YGQLGRGV-TCEGLQGACIISSYAKFLDEAPELVKIAKVSCGEYHTAVISD 243
Query: 57 EGQLWNWGANSNYELGRGDRVGGWK---PKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
+G+++ WG + +LG G K P+ + L + I +A GG H+ ++T G ++
Sbjct: 244 KGEVYTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVACGGVHTCSVTQGGALY 303
Query: 114 SWGYGGHGQLG-------------HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
+WG G GQLG S T + +P+++ + V +ACG S +
Sbjct: 304 AWGGGRSGQLGLGPQTGLFSCVANDSQTFFRNIPVLV---VPKGVQLVACGYSHTLISMS 360
Query: 161 KGKLYMWG 168
G+++ WG
Sbjct: 361 DGRIHGWG 368
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGR-GPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
E+YTWG G+LG + G E +P +V L + + V+CGG T +T+ G
Sbjct: 246 EVYTWGLGN-MGQLGHSSLQYGDKEL----LPRRVVTLDGIFIKDVACGGVHTCSVTQGG 300
Query: 59 QLWNWGANSNYELGRGDRVGGWKP---------KLLPNLVDVRIIQIANGGY-HSLALTD 108
L+ WG + +LG G + G + + +P LV + +Q+ GY H+L
Sbjct: 301 ALYAWGGGRSGQLGLGPQTGLFSCVANDSQTFFRNIPVLVVPKGVQLVACGYSHTLISMS 360
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
DG++ WGY +GQ + P I+ E V +A GG SA +T+ L
Sbjct: 361 DGRIHGWGYNNYGQAANEKCTYAWYPSPIDWCVGE-VRKLAAGGGHSAVLTDAYSL 415
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 71/199 (35%), Gaps = 62/199 (31%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY-- 101
V+CG T + +G L+ WGAN +LG G P+ + L + ++ G +
Sbjct: 65 VACGREHTAAIASDGSLFTWGANDFGQLGDGTEERRKLPEKVKQLESEFVKSVSCGAHCS 124
Query: 102 ---------------------------------------------------HSLALTDDG 110
H +AL+++G
Sbjct: 125 ACIAEPHENDGTISTRRLWVWGQNQGSNLPRLFWGAFKPNTIIREVSCGAVHVVALSEEG 184
Query: 111 KVFSWGYGGHGQLGHSFT----QNQKVPMVIEALADEF-----VTHIACGGSTSAAVTEK 161
+ +WGY +GQLG T Q + DE + ++CG +A +++K
Sbjct: 185 LLQAWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPELVKIAKVSCGEYHTAVISDK 244
Query: 162 GKLYMWGNAKDSQLGVPGL 180
G++Y WG QLG L
Sbjct: 245 GEVYTWGLGNMGQLGHSSL 263
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + EG+LGLG P + A +P+A ++CGG+ ++ +++ G
Sbjct: 184 ELYSWGSN-SEGQLGLGTDIKYEIK-----PKFISAFIGIPIAFIACGGYHSIAISKSGA 237
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L + +I A G S+ LT DG VF+ G G
Sbjct: 238 VFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGM 297
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH N+ +P + L VT I+CG T A V +G++Y WG QLG
Sbjct: 298 YGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALPVPVAAVSCGGFFTMVLTEEGQ 59
+++ WG G LGLG N + IP ++ + ++CG +T+V+T+ G+
Sbjct: 27 DMFCWG-STIHGELGLGGIEDEN----ILIPRELDFKKAAEIQQIACGENYTVVITQIGE 81
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++ G N +LG G + +L+P L + A G YH+LA+ + G++FSWG
Sbjct: 82 IYSCGNNDYGQLGHEK--GRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNT 139
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +S + P +++ L V IACG + A+T G+LY WG+ + QLG+
Sbjct: 140 EGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGL 198
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 88/174 (50%), Gaps = 18/174 (10%)
Query: 6 GRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
G ++G RL L PG + A AA CG + T+ + E GQL++WG+
Sbjct: 94 GHEKGRKRLQLIPG--------------LDAFVFKKAA--CGAYHTLAINEWGQLFSWGS 137
Query: 66 NSNYELGRGDR-VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
N+ +LG + P+++ L ++QIA G H+ ALT++G+++SWG GQLG
Sbjct: 138 NTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLG 197
Query: 125 HSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
++ P I A + IACGG S A+++ G ++ WG QLG+
Sbjct: 198 LGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGL 251
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL N+ ++P +++ L + +CG F++ LT +G +
Sbjct: 238 VFGWGKNTF-GQLGL------NDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGV 290
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA +LG G P+ + L+ + QI+ G H+LAL G+V++WG GG
Sbjct: 291 FTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGG 350
Query: 120 HGQLGHSFTQNQKVPMVIE 138
GQLG+ T++ P V+
Sbjct: 351 AGQLGNHSTRSVTTPQVVH 369
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPK--LLPNLVDVR----IIQIANGGYHSLALT 107
L ++ ++ WG+ + ELG +GG + + L+P +D + I QIA G +++ +T
Sbjct: 22 LHKKKDMFCWGSTIHGELG----LGGIEDENILIPRELDFKKAAEIQQIACGENYTVVIT 77
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
G+++S G +GQLGH + +K +I L ACG + A+ E G+L+ W
Sbjct: 78 QIGEIYSCGNNDYGQLGHE--KGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135
Query: 168 GNAKDSQLGVPGLPVVQPCP 187
G+ + QLG+ ++ P
Sbjct: 136 GSNTEGQLGLNSKNFMESSP 155
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 12/184 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG R N P ++ AL V AV GG + LT +G++++WG +
Sbjct: 2761 GRLGLGHSRNVNS------PHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDD 2814
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG GD P+ + L R+ +A G HS A+T G++++WG G +G+LGH
Sbjct: 2815 GKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDN 2874
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLGVPGLP-VVQP 185
Q P +E+L + V ++CG + + A+ E G +Y WG+ +LG G P
Sbjct: 2875 LTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSP 2934
Query: 186 CPVE 189
C V+
Sbjct: 2935 CLVD 2938
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 97/159 (61%), Gaps = 7/159 (4%)
Query: 25 AGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
A +++PS +++L V AV+ GG + L+ EG++++WG + +LG G+++ +
Sbjct: 3684 AESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDR 3743
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
P+++ +L ++ +A GG HS A+T G++++WG G +G+LGH + +Q P ++EAL
Sbjct: 3744 PRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALL 3803
Query: 142 DEFVTHIACGG--STSAAVTEK--GKLYMWGNAKDSQLG 176
V +ACG + + A+T++ G ++ WG+ +LG
Sbjct: 3804 GYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLG 3842
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+Y WG ++ E LG +G ++ V P+ VA S F ++T+ G+
Sbjct: 2699 RVYVWGLNDKEQ---LGGPKGSKIKVPQAVDWTVSLQPISVAGGSKSLF---LVTQSGKA 2752
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ G SN LG G P + L VR + + +GG H+LALT DG+VFSWG G
Sbjct: 2753 YACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEG 2812
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LGH + P IEAL V +A G + SAAVT G+LY WG + +LG
Sbjct: 2813 DDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLG 2870
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 96/182 (52%), Gaps = 14/182 (7%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
ELYTWG+ GR G LG G ++ P V+AL V V+CG T +T+
Sbjct: 3773 ELYTWGK----GRYGRLGHGDSDDQLK----PKLVEALLGYRVMDVACGSGDAQTCAITD 3824
Query: 57 E--GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
E G +W+WG +LGRG G P + +L + II++ G S+AL+++G V++
Sbjct: 3825 EEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYT 3884
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG G + +LGH ++ + P + L + V I+ G T++G++Y WG+ + Q
Sbjct: 3885 WGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQ 3944
Query: 175 LG 176
LG
Sbjct: 3945 LG 3946
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G IP+K+++L + + V CG F++ L+ G +
Sbjct: 3830 VWSWG-DGDYGKLGRGG------SDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSV 3882
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L ++I I+ G H + TD G+V++WG
Sbjct: 3883 YTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDE 3942
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL ++ + ++CG + + A
Sbjct: 3943 GQLGDGTTTGIQKPRLVAALQNKKINRVSCGSAHTVA 3979
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG RG +E G S P V L + V V CG F++ LT G +
Sbjct: 2912 VYSWG-DGDFGKLG----RGGSE--GCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHV 2964
Query: 61 WNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG + LG G D+ W P L+ L ++I ++ G H LA+TD G+VF+WG
Sbjct: 2965 YTWGKGDYFRLGHGSDQHVRW-PTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDND 3023
Query: 120 HGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HGQ G+ S T N++ P +++ + +T +ACG S S A T
Sbjct: 3024 HGQQGNGSITVNRR-PTLVQGIDGIKITRVACGSSHSVAWT 3063
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + L+ P +V++L V VSCG T+ L E
Sbjct: 2857 ELYTWGLGE-YGRLGHG-----DNLTQLT-PKRVESLVGQRVVQVSCGSRDAQTLALVEG 2909
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P L+ L + + + G S+ALT +G V++WG
Sbjct: 2910 GLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGK 2969
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P ++E L + V ++ G AVT+ G+++ WG+ Q G
Sbjct: 2970 GDYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQG 3028
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ++ WG N +LG + P + L +R IQ+A G A+T DG+V++ GY
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYATGY 3673
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG ++ VP ++E+L FV +A GG A++ +G++Y WG +D +L
Sbjct: 3674 GAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKL 3733
Query: 176 GV-PGLPVVQPCPVE 189
G LP +P +E
Sbjct: 3734 GHGNKLPCDRPRIIE 3748
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 18/134 (13%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
V+ LP+ + V C ++L+ +G+++ N R P V
Sbjct: 260 VQKLPITIDQVVCTALGLLILSGDGKVYTISYNDQEPTLRNLNCFSAFP--------VAE 311
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
I G LT G+V+ W + + MVI ++D+ + I+CG
Sbjct: 312 IGFMAGNCVCAVLTHSGQVYLWPWMEDS--------DDNPTMVI--ISDQDIVRISCGDE 361
Query: 154 TSAAVTEKGKLYMW 167
A+++ G++Y+W
Sbjct: 362 YGVALSKNGEIYIW 375
>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 959
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
+L+TWG D + RLG G P P L + ++CG T+ LT
Sbjct: 267 KLFTWG-DGDKHRLGHGDKEPKLKPTCVASL--------IDYDFCRIACGHSLTVGLTTS 317
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+ + G +LG R G P L+ +++ ++Q+A G YH LT+ +VF+WG
Sbjct: 318 GQVLSMGNTVYGQLG-NPRSDGKLPCLIEDIMGEHVVQVACGSYHVAVLTNKSEVFTWGK 376
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
G +G+LGH +++K+P ++E+L D V HIACG + ++A+ +
Sbjct: 377 GANGRLGHGDVEDRKIPTLVESLRDRAVRHIACGSNFTSAICQ 419
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 20/188 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G +G G+ G G E+ S P +V++L + AV+CG + T + E
Sbjct: 204 QLFTFG----DGTFGV-LGHGNRES--FSCPREVESLSGLKTIAVACGVWHTAAVVEVIV 256
Query: 57 --------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+L+ WG + LG GD+ KP + +L+D +IA G ++ LT
Sbjct: 257 TQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYDFCRIACGHSLTVGLTT 316
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G+V S G +GQLG+ + + K+P +IE + E V +ACG A +T K +++ WG
Sbjct: 317 SGQVLSMGNTVYGQLGNPRS-DGKLPCLIEDIMGEHVVQVACGSYHVAVLTNKSEVFTWG 375
Query: 169 NAKDSQLG 176
+ +LG
Sbjct: 376 KGANGRLG 383
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 18/202 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV--PVAAVSCGGFFTMVLTEEG 58
ELYTWG +G +GL G G + + IP ++ + VA VSCG + T ++T G
Sbjct: 149 ELYTWG--DGTHNIGL-LGNGTDVSHW--IPKRISGVLEGHQVAYVSCGTWHTALVTSRG 203
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
QL+ +G + LG G+R P+ + +L ++ I +A G +H+ A+ +
Sbjct: 204 QLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSM 263
Query: 109 -DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
GK+F+WG G +LGH + + P + +L D IACG S + +T G++
Sbjct: 264 SSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYDFCRIACGHSLTVGLTTSGQVLSM 323
Query: 168 GNAKDSQLGVPGLPVVQPCPVE 189
GN QLG P PC +E
Sbjct: 324 GNTVYGQLGNPRSDGKLPCLIE 345
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 8/176 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPG---RGPNEAGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTE 56
++Y WG + + +GP R +A L +P +++ L + V V CG ++T+
Sbjct: 36 DVYVWGEVICDNTVRVGPDTVIRSTAKADFL-LPKPLESKLVLDVYHVDCGVKHAALVTK 94
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
G+++ WG S LG G R P+L+ +L + +A G +H+ A+T G++++WG
Sbjct: 95 NGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCAVTTSGELYTWG 154
Query: 117 YGGH--GQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G H G LG+ + +P I L V +++CG +A VT +G+L+ +G+
Sbjct: 155 DGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGTWHTALVTSRGQLFTFGD 210
>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
Length = 815
Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL + +P +V + PV+ +SCG + + +T +G+L+
Sbjct: 161 LFMWG-DNSEGQIGL------KNVSNVCVPQQV-TIGNPVSWISCGYYHSAFVTTDGELY 212
Query: 62 NWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G N +LG +++ G P+L+ + + ++IQ+A GG H++ LT++ V+++G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P VIE + D+ +++I+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGN 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD ++ + +I Q++ G S ALT+DG++F WG
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + V+ I+CG SA VT G+LY++G ++ +LG+P
Sbjct: 168 SEGQIGLKNVSNVCVPQ--QVTIGNPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLP 225
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VPV +SCG + V+T +L+ +G+N+ +LG G + KP + L ++ A
Sbjct: 36 VPVH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAAC 94
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAA 157
G H+L T+ G V++ G GQLG T+ + VI E + ++ G +TSAA
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
+TE G+L+MWG+ + Q+G+
Sbjct: 155 LTEDGRLFMWGDNSEGQIGL 174
>gi|390341567|ref|XP_003725482.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Strongylocentrotus purpuratus]
Length = 238
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 17/159 (10%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELG----------RGDRVGGWKPKLLPNL 88
V + +V CG + L+ +G++++WG+N+ +LG + +KP+L+ L
Sbjct: 75 VDIVSVCCGRHHFLALSADGRVYSWGSNNVGQLGIRKKKQRYDNQSQTTQDFKPRLIKEL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-------HSFTQNQKVPMVIEALA 141
+IQIA G HSLALT DG++FSWG HGQLG + + P+ IE L
Sbjct: 135 SKFDVIQIACGDDHSLALTLDGRLFSWGCNRHGQLGVETKGLAKRAKHHVEKPIEIEGLW 194
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
+ HIA GG+ S A++ G +++WG QLG+ L
Sbjct: 195 GIPLQHIAAGGAHSVALSTTGSIFVWGKNTHGQLGLQQL 233
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 101/192 (52%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+TWG++ G+LGLG G E LS PS VK+L +P+A ++ GG L+ G
Sbjct: 156 QLFTWGQNSS-GQLGLGKG----ETSKLS-PSPVKSLAGIPLAQITAGGDHCFALSLSGA 209
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D+ P + L R++ I+ G H+ ALT G +F++G G
Sbjct: 210 VFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGS 269
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH + N+ +P + L V+ I CG T A V G +Y +G QLG
Sbjct: 270 RGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTG 329
Query: 179 GLPVVQ-PCPVE 189
L ++ P PV+
Sbjct: 330 ILADLRSPHPVK 341
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 3/135 (2%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
V+CGG T+ L ++G ++ G+NS +LG D+ G P+L+ L +I ++ G HS
Sbjct: 38 VACGGQHTLFLLQDGSVYTCGSNSCGQLGH-DKAGN-SPELVGALDTQKITMVSCGRAHS 95
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
+A+ + G+VF WG G GQLG + ++P +++ L D ++ + CG A++ G
Sbjct: 96 VAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDG 155
Query: 163 KLYMWGNAKDSQLGV 177
+L+ WG QLG+
Sbjct: 156 QLFTWGQNSSGQLGL 170
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLGLGP-GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+YT G + G+LG G P G L + VSCG ++ + E+GQ+
Sbjct: 54 VYTCGSNSC-GQLGHDKAGNSPELVGALDTQK--------ITMVSCGRAHSVAVNEQGQV 104
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WGA +LG + P+LL L D I Q+ G H +AL+ DG++F+WG
Sbjct: 105 FVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNS 164
Query: 120 HGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + K+ P +++LA + I GG A++ G ++ WG K QLG+
Sbjct: 165 SGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGL 223
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
++A GG H+L L DG V++ G GQLGH N P ++ AL + +T ++CG +
Sbjct: 37 EVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGNS--PELVGALDTQKITMVSCGRAH 94
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
S AV E+G++++WG QLG+
Sbjct: 95 SVAVNEQGQVFVWGAGDGGQLGL 117
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 12/147 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
++ WG+++ G+LGL N+ ++P +K L V +SCG T LT+ G L
Sbjct: 210 VFGWGKNKA-GQLGL------NDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGL 262
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +G S +LG G P+ + L+ + QI G +H+LA G V+++G
Sbjct: 263 FTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNS 322
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVT 146
HGQLG + + P + ++F+T
Sbjct: 323 HGQLGTGILADLRSP---HPVKNDFLT 346
>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
griseus]
gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
Length = 531
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGL 215
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G + L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + + + R++ IA G S+A+ D G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV + V +++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSG------STANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC + TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGSKNNLLSPTPIMVEKERVVEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVVL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 IYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
++ +TD+ +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 34 AIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ VQ C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVC 122
>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1028
Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 23/192 (11%)
Query: 2 LYTWGRD-EGEGRLGLGPGRGPNEAGGLSIPSKV--KALPVPVAAVSCGGFFTMVLTEEG 58
LYTWG D G LG G A IP +V + V ++ VSCG + T ++ +G
Sbjct: 371 LYTWGDDTHNTGYLGHG------SAVSHWIPREVIGQIESVRISFVSCGPWHTAAVSSQG 424
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
+L+ +G + LG GDR KP+ + +L +R ++++ G +H+ A+ D
Sbjct: 425 KLFTFGDGTFGALGHGDRSSTSKPREVESLKGLRTLKVSCGIWHTAAVIDFINESDRLDT 484
Query: 109 --DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
GK+F+WG G GQLGH + + VP + A V +AC S + A+T G++Y
Sbjct: 485 SLSGKLFTWGAGERGQLGHGDEEPRLVPSCVSMPAG--VCQVACAHSMTIALTVLGQVYT 542
Query: 167 WGNAKDSQLGVP 178
G A QLG P
Sbjct: 543 MGAADYGQLGSP 554
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 25/193 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG G G+LG G +S P + AL V V+CG F T +T G
Sbjct: 318 QIFSWGESSG-GKLGHGAD------ADVSQPKVIDALSESNVVLVACGEFHTCAVTVSGN 370
Query: 60 LWNWG---ANSNYELGRGDRVGGWKPK-LLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
L+ WG N+ Y LG G V W P+ ++ + VRI ++ G +H+ A++ GK+F++
Sbjct: 371 LYTWGDDTHNTGY-LGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVSSQGKLFTF 429
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE------------KGK 163
G G G LGH + P +E+L ++CG +AAV + GK
Sbjct: 430 GDGTFGALGHGDRSSTSKPREVESLKGLRTLKVSCGIWHTAAVIDFINESDRLDTSLSGK 489
Query: 164 LYMWGNAKDSQLG 176
L+ WG + QLG
Sbjct: 490 LFTWGAGERGQLG 502
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/158 (34%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+TWG E G+LG G +E L +PS V ++P V V+C T+ LT GQ+
Sbjct: 489 KLFTWGAGE-RGQLGHG-----DEEPRL-VPSCV-SMPAGVCQVACAHSMTIALTVLGQV 540
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ GA +LG VG ++ + I QIA G +H +AL+ +G V++WG G +
Sbjct: 541 YTMGAADYGQLGSPCSVGKLPIHTDGDIRNCHIKQIACGSHHVVALSSNGDVYTWGKGIN 600
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
GQLGH +++ P +++AL + V + CG + +A +
Sbjct: 601 GQLGHGDIKDRHTPTLVKALKHKQVKSVVCGSNFTAVI 638
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
++CG +++T++GQ+++WG +S +LG G +PK++ L + ++ +A G +H+
Sbjct: 303 IACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHT 362
Query: 104 LALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTE 160
A+T G +++WG H G LGH + +P VI + ++ ++CG +AAV+
Sbjct: 363 CAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVSS 422
Query: 161 KGKLYMWGNAKDSQLG 176
+GKL+ +G+ LG
Sbjct: 423 QGKLFTFGDGTFGALG 438
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 51/94 (54%)
Query: 76 RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
R+ PK L + + IA G H++ +T G++FSWG G+LGH + P
Sbjct: 283 RMDALLPKALDRIAALDAQIIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVSQPK 342
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
VI+AL++ V +ACG + AVT G LY WG+
Sbjct: 343 VIDALSESNVVLVACGEFHTCAVTVSGNLYTWGD 376
>gi|55832768|gb|AAV66897.1| truncated HERC6 [Homo sapiens]
Length = 322
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 98/180 (54%), Gaps = 13/180 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG +P ++AL + V VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRRGAQRG-------ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L D++IIQ++ G YHSLAL+ D +VFSWG HGQ
Sbjct: 102 GSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPV 182
LG F +Q P + +L + +A GG+ S A++ G + WG+ QL + G V
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV 220
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 13/187 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKAL-PVPVAAVSCGGFFTMVLTEEG 58
++ WG EG+LG+G E +S P K+ L + + VSCG + ++ L+++
Sbjct: 95 RVFAWGAGS-EGQLGIG------EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDS 147
Query: 59 QLWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
Q+++WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 148 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGS 207
Query: 118 GGHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
GQL G + P+ + AL + V +I+CG + +A +T+ GK++ +G+ + Q
Sbjct: 208 NSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQ 267
Query: 175 LGVPGLP 181
LG P
Sbjct: 268 LGYSPTP 274
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 90/155 (58%), Gaps = 11/155 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKNS-HGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR V KP + L ++ ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
GQLG+S T ++ P ++E + D V+ I CG
Sbjct: 262 DNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCG 295
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + P I L D + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WGA+S EL R G +LL Q A+G HSL L + +V S G
Sbjct: 3 FCWGADSR-ELQRRRTAGSPGAELL---------QAASGERHSLLLLTNHRVLSCGDNSR 52
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG Q ++P I+AL V ++CG S AV KG+++ WG + QLG+
Sbjct: 53 GQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109
>gi|403350728|gb|EJY74833.1| hypothetical protein OXYTRI_03788 [Oxytricha trifallax]
Length = 1271
Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
+VS G ++ LT +G ++++G+ + +G G G P +L L D RI+QIA G H
Sbjct: 451 SVSSGRNHSLHLTRDGDVFSYGSGTFSAVGHGGSKGQLNPTVLKPLRDKRIVQIACGENH 510
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
SL LTD VF+WG G GQLG S + + P I++ + V++IA G S A+T+
Sbjct: 511 SLVLTDKADVFAWGRGFEGQLGLSKSIEIASTPQYIKSFYGKPVSYIAAGSQYSLAITKD 570
Query: 162 GKLYMWGNAKDSQLGV 177
G ++ WG AK QLG+
Sbjct: 571 GSVWGWGEAKLGQLGM 586
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 52/85 (61%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
++ +++G HSL LT DG VFS+G G +GH ++ Q P V++ L D+ + IACG
Sbjct: 449 LLSVSSGRNHSLHLTRDGDVFSYGSGTFSAVGHGGSKGQLNPTVLKPLRDKRIVQIACGE 508
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ S +T+K ++ WG + QLG+
Sbjct: 509 NHSLVLTDKADVFAWGRGFEGQLGL 533
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG-GWKPKLLPNLVDVRIIQIANG 99
+ ++CG ++VLT++ ++ WG +LG + P+ + + + IA G
Sbjct: 501 IVQIACGENHSLVLTDKADVFAWGRGFEGQLGLSKSIEIASTPQYIKSFYGKPVSYIAAG 560
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH-IAC--GGSTSA 156
+SLA+T DG V+ WG GQLG + ++P I DE + I C G SA
Sbjct: 561 SQYSLAITKDGSVWGWGEAKLGQLGMGKQREVRLPTKISFGDDENAKNFIQCSAGYGHSA 620
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
A+T++G LY WG QLG
Sbjct: 621 ALTQEGHLYTWGFNNFGQLG 640
Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 18/142 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+++ WGR EG+LGL S P +K+ PV+ ++ G +++ +T++G
Sbjct: 519 DVFAWGRG-FEGQLGLS-----KSIEIASTPQYIKSFYGKPVSYIAAGSQYSLAITKDGS 572
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV-------RIIQIANGGYHSLALTDDGKV 112
+W WG +LG G + + LP + IQ + G HS ALT +G +
Sbjct: 573 VWGWGEAKLGQLGMGKQ----REVRLPTKISFGDDENAKNFIQCSAGYGHSAALTQEGHL 628
Query: 113 FSWGYGGHGQLGHSFTQNQKVP 134
++WG+ GQLG + + Q P
Sbjct: 629 YTWGFNNFGQLGQNNFETQWTP 650
>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 954
Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 1 ELYTWGR-DEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY WG D G LGLG G + + I +++ + V A+SCG + T +T EG+
Sbjct: 371 DLYAWGDGDHNAGLLGLG--SGASHWKPVRILGQMEG--IYVKAISCGPWHTAFVTSEGK 426
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL-------TDDGKV 112
L+ +G + LG GDR+ P+ + L R I+ A G +HS A+ T GK+
Sbjct: 427 LFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKL 486
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
F+WG G G+LGH + + +P + L +ACG S + A++ G++Y G A
Sbjct: 487 FTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADP 546
Query: 173 SQ 174
S
Sbjct: 547 SH 548
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 66/242 (27%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS---IPSKVKA-LPVPVAAVSCGGFFTMVLTE 56
+++ WG G+G LG G + + + ++ +P +K+ + + ++SCG + +++T+
Sbjct: 257 DVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTK 316
Query: 57 EGQLWNWGANSN--------------------------------------------YELG 72
+GQ+++WG S Y G
Sbjct: 317 QGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWG 376
Query: 73 RGDRVGG----------WKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
GD G WKP ++L + + + I+ G +H+ +T +GK+F++G G G
Sbjct: 377 DGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFG 436
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV-------TEKGKLYMWGNAKDSQ 174
LGH + +P +EAL ACG SAAV T GKL+ WG+ D +
Sbjct: 437 ALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGR 496
Query: 175 LG 176
LG
Sbjct: 497 LG 498
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 17/161 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L+TWG D +GRLG G + IPS V L V+CG T+ L+ GQ
Sbjct: 485 KLFTWG-DGDDGRLGHG------DIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQ 537
Query: 60 LWNWG-ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA-LTDDGKVFSWGY 117
++ G A+ ++++ R P + + +Q G+H +A L +V++WG
Sbjct: 538 VYAMGTADPSHDIVRA-------PSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGK 590
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G +GQLGH T+ + +P +++AL + V + CG + +A +
Sbjct: 591 GSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK+L + V + I+ G +++ +T G+++SWG G+LGH P +I+
Sbjct: 290 PKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFN 349
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
V CG + AVT G LY WG+ D G+ GL
Sbjct: 350 GSTVELADCGEFHTCAVTASGDLYAWGDG-DHNAGLLGL 387
>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
Length = 951
Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 1 ELYTWGR-DEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY WG D G LGLG G + + I +++ + V A+SCG + T +T EG+
Sbjct: 368 DLYAWGDGDHNAGLLGLG--SGASHWKPVRILGQMEG--IYVKAISCGPWHTAFVTSEGK 423
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL-------TDDGKV 112
L+ +G + LG GDR+ P+ + L R I+ A G +HS A+ T GK+
Sbjct: 424 LFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKL 483
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
F+WG G G+LGH + + +P + L +ACG S + A++ G++Y G A
Sbjct: 484 FTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADP 543
Query: 173 SQ 174
S
Sbjct: 544 SH 545
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 66/242 (27%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS---IPSKVKA-LPVPVAAVSCGGFFTMVLTE 56
+++ WG G+G LG G + + + ++ +P +K+ + + ++SCG + +++T+
Sbjct: 254 DVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTK 313
Query: 57 EGQLWNWGANSN--------------------------------------------YELG 72
+GQ+++WG S Y G
Sbjct: 314 QGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWG 373
Query: 73 RGDRVGG----------WKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
GD G WKP ++L + + + I+ G +H+ +T +GK+F++G G G
Sbjct: 374 DGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFG 433
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV-------TEKGKLYMWGNAKDSQ 174
LGH + +P +EAL ACG SAAV T GKL+ WG+ D +
Sbjct: 434 ALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGR 493
Query: 175 LG 176
LG
Sbjct: 494 LG 495
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 17/161 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L+TWG D +GRLG G + IPS V L V+CG T+ L+ GQ
Sbjct: 482 KLFTWG-DGDDGRLGHG------DIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQ 534
Query: 60 LWNWG-ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA-LTDDGKVFSWGY 117
++ G A+ ++++ R P + + +Q G+H +A L +V++WG
Sbjct: 535 VYAMGTADPSHDIVRA-------PSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGK 587
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G +GQLGH T+ + +P +++AL + V + CG + +A +
Sbjct: 588 GSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 628
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK+L + V + I+ G +++ +T G+++SWG G+LGH P +I+
Sbjct: 287 PKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFN 346
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
V CG + AVT G LY WG+ D G+ GL
Sbjct: 347 GSTVELADCGEFHTCAVTASGDLYAWGDG-DHNAGLLGL 384
>gi|302804166|ref|XP_002983835.1| hypothetical protein SELMODRAFT_423074 [Selaginella moellendorffii]
gi|300148187|gb|EFJ14847.1| hypothetical protein SELMODRAFT_423074 [Selaginella moellendorffii]
Length = 506
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 74/140 (52%), Gaps = 49/140 (35%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPN--EAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
ELYTWGRDEGEGRLG G P+ + G LS P+KV+AL VP+A+V CGGFFTM LT+ G
Sbjct: 188 ELYTWGRDEGEGRLGHG---NPDIMDEGALSRPTKVQALDVPIASVYCGGFFTMALTKSG 244
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
QLW+WG +DGKV +WGYG
Sbjct: 245 QLWSWG-------------------------------------------EDGKVIAWGYG 261
Query: 119 GHGQLGHSFTQNQKVPMVIE 138
G+GQ + + Q +P +++
Sbjct: 262 GNGQEKNRL-RPQPLPSILQ 280
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 44/148 (29%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG LG +KP + N+ R+ + GG H++ALT+ G V++WG+G
Sbjct: 107 WGKGDGGRLGIDTEFNQYKPYV--NIRIKRVQMASAGGLHNIALTEVGNVYTWGHGAVDA 164
Query: 123 LGHSFTQNQKV-----------------------------------------PMVIEALA 141
LGH + + + P ++AL
Sbjct: 165 LGHGSYERELIVGRPVERQDSSRELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQAL- 223
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
D + + CGG + A+T+ G+L+ WG
Sbjct: 224 DVPIASVYCGGFFTMALTKSGQLWSWGE 251
>gi|324509125|gb|ADY43843.1| RCC1 and BTB domain-containing protein 1 [Ascaris suum]
Length = 533
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV--KALPVPVAAVSCGGFFTMVLTEEG 58
E++ WGR+ G++G+G + +P +V L V +V CG TM LT+ G
Sbjct: 148 EIFAWGRNSC-GQVGIGSNVNQD------LPRQVTGHLLNRFVRSVVCGQNSTMALTDGG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P L+ L +V I QIA G HSLALTD+G++F+WG
Sbjct: 201 EVFAWGFNGNGQLGAGNLSNQHSPALVIGLHNVVIEQIACGFAHSLALTDEGQLFAWGSN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQL + ++ + V+ A A + +A + + AV + GK+YMWG +
Sbjct: 261 TCGQLCANLPRSNQTSPVLVASALGRIIEVAAVHACNITVAVNQSGKVYMWGQVRGQTAT 320
Query: 177 VP 178
P
Sbjct: 321 CP 322
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 4/165 (2%)
Query: 21 GPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG 78
G N + G PS++ L V+ G + L++ G++++WG N+ +LG G
Sbjct: 55 GTNRSQGTLEPSRIDTLSGRAIVSLAYGSGPHVLALSQNGEVFSWGHNAFGQLGLGSTTV 114
Query: 79 GWKPKLL-PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP-MV 136
G P L+ L ++QIA G +HS+A+TD G++F+WG GQ+G NQ +P V
Sbjct: 115 GIAPSLVGDTLSGHNVVQIACGSHHSVAVTDRGEIFAWGRNSCGQVGIGSNVNQDLPRQV 174
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLP 181
L + FV + CG +++ A+T+ G+++ WG + QLG L
Sbjct: 175 TGHLLNRFVRSVVCGQNSTMALTDGGEVFAWGFNGNGQLGAGNLS 219
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+++T+EG+L+ G NS LG G +P + L I+ +A G G H LAL+ +G
Sbjct: 35 ILVTKEGELYAIGTNSCSCLGTNRSQGTLEPSRIDTLSGRAIVSLAYGSGPHVLALSQNG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVI-EALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VFSWG+ GQLG T P ++ + L+ V IACG S AVT++G+++ WG
Sbjct: 95 EVFSWGHNAFGQLGLGSTTVGIAPSLVGDTLSGHNVVQIACGSHHSVAVTDRGEIFAWGR 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G+ G V Q P
Sbjct: 155 NSCGQVGI-GSNVNQDLP 171
>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
Length = 870
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
+L+TWG D + RLG G P P L + ++CG T+ LT
Sbjct: 267 KLFTWG-DGDKHRLGHGDKEPRLKPTCVASL--------IDYDFCRIACGHSLTVGLTTS 317
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+ + G +LG R G P L+ +++ ++Q+A G YH LT+ +VF+WG
Sbjct: 318 GQILSMGNTVYGQLG-NPRSDGKLPCLVEDIMGEHVVQVACGSYHVAVLTNKSEVFTWGK 376
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
G +G+LGH +++K+P ++EAL D V HIACG + ++A+ +
Sbjct: 377 GANGRLGHGDIEDRKIPTLVEALRDRGVRHIACGSNFTSAICQ 419
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 18/202 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALP-VPVAAVSCGGFFTMVLTEEG 58
ELYTWG +G +GL G G + + IP ++ AL VA VSCG + T ++T G
Sbjct: 149 ELYTWG--DGTHNIGL-LGNGTDVSHW--IPKRISGALEGHQVAYVSCGTWHTALVTSRG 203
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
QL+ +G + LG G+R P+ + +L ++ I +A G +H+ A+ +
Sbjct: 204 QLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSM 263
Query: 109 -DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
GK+F+WG G +LGH + + P + +L D IACG S + +T G++
Sbjct: 264 SSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFCRIACGHSLTVGLTTSGQILSM 323
Query: 168 GNAKDSQLGVPGLPVVQPCPVE 189
GN QLG P PC VE
Sbjct: 324 GNTVYGQLGNPRSDGKLPCLVE 345
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 97/188 (51%), Gaps = 20/188 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G +G G+ G G E+ S P +V++L + AV+CG + T + E
Sbjct: 204 QLFTFG----DGTFGV-LGHGNRES--FSCPREVESLSGLKTIAVACGVWHTAAVVEVIV 256
Query: 57 --------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+L+ WG + LG GD+ KP + +L+D +IA G ++ LT
Sbjct: 257 TQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFCRIACGHSLTVGLTT 316
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G++ S G +GQLG+ + + K+P ++E + E V +ACG A +T K +++ WG
Sbjct: 317 SGQILSMGNTVYGQLGNPRS-DGKLPCLVEDIMGEHVVQVACGSYHVAVLTNKSEVFTWG 375
Query: 169 NAKDSQLG 176
+ +LG
Sbjct: 376 KGANGRLG 383
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 93/176 (52%), Gaps = 8/176 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPG---RGPNEAGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTE 56
++Y WG + + +GP R +A L +P +++ L + V V CG ++T+
Sbjct: 36 DVYVWGEVICDNTVRVGPDTVIRSTGKADFL-LPKPLESKLVLDVYHVDCGVKHAALVTK 94
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
G+++ WG S LG G R P+L+ +L + +A G +H+ A+T G++++WG
Sbjct: 95 NGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCAVTTAGELYTWG 154
Query: 117 YGGH--GQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G H G LG+ + +P I AL V +++CG +A VT +G+L+ +G+
Sbjct: 155 DGTHNIGLLGNGTDVSHWIPKRISGALEGHQVAYVSCGTWHTALVTSRGQLFTFGD 210
>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 722
Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 59/177 (33%), Positives = 90/177 (50%), Gaps = 8/177 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+++WG+ G RLG N+ L I S K + S G F + +T G+L+
Sbjct: 234 IFSWGKG-GFNRLGY-KAEIVNQKHPLQIESLSKQ---QIIQFSLGSFHSAAITNNGRLY 288
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG +SN +LG G PK + L + I+ +A G H+LAL+ + ++FSWG G
Sbjct: 289 TWGRDSNGQLGHGQAKADIFPKEVQALQNTYIVSVACGEGHTLALSKNNELFSWGLNSSG 348
Query: 122 QLGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG + ++N K P I D+ + IACG S + + G +Y WG+ + QLG
Sbjct: 349 QLGRA-SENLKSSDPKKISFFEDKSIKQIACGSKHSLVLLQDGTVYSWGSNQYGQLG 404
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 94/178 (52%), Gaps = 6/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY WG + +LG+ G+ L + P + V +V FT+ + ++G+
Sbjct: 178 KLYVWG-SSSDWQLGIDTGKTDYVNQPLEMSPDYWEG---NVESVKACSDFTIAIDKQGR 233
Query: 60 LWNWGANSNYELG-RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG LG + + V P + +L +IIQ + G +HS A+T++G++++WG
Sbjct: 234 IFSWGKGGFNRLGYKAEIVNQKHPLQIESLSKQQIIQFSLGSFHSAAITNNGRLYTWGRD 293
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH + P ++AL + ++ +ACG + A+++ +L+ WG QLG
Sbjct: 294 SNGQLGHGQAKADIFPKEVQALQNTYIVSVACGEGHTLALSKNNELFSWGLNSSGQLG 351
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/133 (39%), Positives = 73/133 (54%), Gaps = 9/133 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
LYTWGRD G+LG G +A P +V+AL + +V+CG T+ L++ +L
Sbjct: 287 LYTWGRDS-NGQLGHG------QAKADIFPKEVQALQNTYIVSVACGEGHTLALSKNNEL 339
Query: 61 WNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG NS+ +LGR + + PK + D I QIA G HSL L DG V+SWG
Sbjct: 340 FSWGLNSSGQLGRASENLKSSDPKKISFFEDKSIKQIACGSKHSLVLLQDGTVYSWGSNQ 399
Query: 120 HGQLGHSFTQNQK 132
+GQLG N +
Sbjct: 400 YGQLGFDQDSNAQ 412
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 26/163 (15%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-----------PKLLPNLV 89
+ + CG + + +++ WG N +LG D P + L
Sbjct: 30 IVKIVCGANHSYAIDTNFEVYAWGCNLGRKLGLSDEYYNQIFQADIPEQIKIPVKVTELS 89
Query: 90 DVRIIQIANGGYHSLAL-TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE----- 143
+ +I I+ G HS A T+ +V+ WG G +G+LG+ +++ + P + L
Sbjct: 90 NKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLGNKESKDLQYPEIFNGLKQPEGIQW 149
Query: 144 FVTHIACGGSTSAAVTE---------KGKLYMWGNAKDSQLGV 177
++ I+CG + + AV + + KLY+WG++ D QLG+
Sbjct: 150 EISEISCGENHTVAVIKQINVNNSQSQNKLYVWGSSSDWQLGI 192
Score = 42.7 bits (99), Expect = 0.077, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 31/216 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAA--------VSCGGFFTM 52
E+Y WG + G +LGL N+ IP ++K +PV V +S G +
Sbjct: 48 EVYAWGCNLGR-KLGLS-DEYYNQIFQADIPEQIK-IPVKVTELSNKKINNISTGTNHSF 104
Query: 53 VL-TEEGQLWNWGANSNYELGRGDRVGGWKPKLL-----PNLVDVRIIQIANGGYHSLAL 106
TE Q++ WG +LG + P++ P + I +I+ G H++A+
Sbjct: 105 AWSTELNQVYCWGIGEYGKLGNKESKDLQYPEIFNGLKQPEGIQWEISEISCGENHTVAV 164
Query: 107 ---------TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI----ACGGS 153
K++ WG QLG + V +E D + ++ AC
Sbjct: 165 IKQINVNNSQSQNKLYVWGSSSDWQLGIDTGKTDYVNQPLEMSPDYWEGNVESVKACSDF 224
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
T A+ ++G+++ WG ++LG V Q P++
Sbjct: 225 T-IAIDKQGRIFSWGKGGFNRLGYKAEIVNQKHPLQ 259
>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
Length = 1083
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 20/203 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP---VAAVSCGGFFTMVLTEE 57
E+YTWG +G GL G G + + IP ++ P+ +A+VSCG + T ++T
Sbjct: 349 EIYTWG--DGTHNAGL-LGHGTDVSHW--IPKRISG-PLEGLQIASVSCGPWHTALITST 402
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G + LG GD+ + P+ + +L +R I +A G +H+ A+ +
Sbjct: 403 GQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSS 462
Query: 109 --DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
GK+F+WG G +LGH +++ P + AL D +ACG S + +T GK+Y
Sbjct: 463 ISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYT 522
Query: 167 WGNAKDSQLGVPGLPVVQPCPVE 189
G+ QLG P PC VE
Sbjct: 523 MGSTVYGQLGNPNADGKLPCLVE 545
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 22/173 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L+TWG D + RLG G + P+ V AL V+CG T+ LT G+
Sbjct: 467 KLFTWG-DGDKSRLGHGDKESRLK------PTCVSALIDHTFHRVACGHSLTVGLTTSGK 519
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII-----QIANGGYHSLALTDDGKVFS 114
++ G+ +LG + G LP LV+ ++I +IA G YH LT +VF+
Sbjct: 520 VYTMGSTVYGQLGNPNADGK-----LPCLVEDKLIKDCVEEIACGAYHVAVLTSRNEVFT 574
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
WG G +G+LGH +++K P +++ L + V +IACG + +AA+ L+ W
Sbjct: 575 WGKGANGRLGHGDIEDRKAPSLVDTLKERHVKNIACGSNFTAAIC----LHKW 623
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G +G G+ G G E + P +V++L + AV+CG + + E
Sbjct: 404 QLFTFG----DGTFGV-LGHGDKET--VFYPREVESLSGLRTIAVACGVWHAAAIVEVIV 456
Query: 57 --------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+L+ WG LG GD+ KP + L+D ++A G ++ LT
Sbjct: 457 TQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTFHRVACGHSLTVGLTT 516
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMW 167
GKV++ G +GQLG+ + K+P ++E L + V IACG A +T + +++ W
Sbjct: 517 SGKVYTMGSTVYGQLGNP-NADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSRNEVFTW 575
Query: 168 GNAKDSQLG 176
G + +LG
Sbjct: 576 GKGANGRLG 584
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%)
Query: 74 GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV 133
G R PK L + V + + IA G H+ ++ G+VF+WG G+LGH ++
Sbjct: 260 GSRSDVLIPKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDVTG 319
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
P +IE+LA V +ACG + AVT G++Y WG+
Sbjct: 320 PQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWGD 355
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 7/176 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS---IPSKVKA-LPVPVAAVSCGGFFTMVLTE 56
++Y WG + G + G S IP +++ + + V ++CG +++
Sbjct: 235 DVYIWGEVLCDNVAKFGAEKNATCVGSRSDVLIPKPLESNVVLDVHHIACGVRHAALVSR 294
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+G+++ WG S LG G P+L+ +L + +A G +H+ A+T G++++WG
Sbjct: 295 QGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWG 354
Query: 117 YGGH--GQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G H G LGH + +P I L + ++CG +A +T G+L+ +G+
Sbjct: 355 DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGD 410
>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
Length = 364
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 98/180 (54%), Gaps = 13/180 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG +P ++AL + V VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRRGAQRG-------ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L D++IIQ++ G YHSLAL+ D +VFSWG HGQ
Sbjct: 102 GSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPV 182
LG F +Q P + +L + +A GG+ S A++ G + WG+ QL + G V
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV 220
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 13/187 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKAL-PVPVAAVSCGGFFTMVLTEEG 58
++ WG EG+LG+G E +S P K+ L + + VSCG + ++ L+++
Sbjct: 95 RVFAWGAGS-EGQLGIG------EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDS 147
Query: 59 QLWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
Q+++WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 148 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGS 207
Query: 118 GGHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
GQL G + P+ + AL + V +I+CG + +A +T+ GK++ +G+ + Q
Sbjct: 208 NSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQ 267
Query: 175 LGVPGLP 181
LG P
Sbjct: 268 LGYSPTP 274
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 99/174 (56%), Gaps = 12/174 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKNS-HGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR V KP + L ++ ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGN 169
GQLG+S T ++ P ++E + D V+ I CG T A V G++ +G+
Sbjct: 262 DNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVVSFGH 314
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + P I L D + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WGA+S EL R G +LL Q A+G HSL L + +V S G
Sbjct: 3 FCWGADSR-ELQRRRTAGSPGAELL---------QAASGERHSLLLLTNHRVLSCGDNSR 52
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG Q ++P I+AL V ++CG S AV KG+++ WG + QLG+
Sbjct: 53 GQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109
>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
[Equus caballus]
Length = 966
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 96/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G P V+ L VP+ +S G +M L+
Sbjct: 102 ELFAWGQN-TYGQLGVG-----RTFASTPTPQIVEHLSGVPLVQISAGEAHSMALSMSRN 155
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + + +A GG H+ LT DG VF++G G
Sbjct: 156 VYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFLACGGSHTALLTKDGLVFTFGAGK 215
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
GQLGH+ TQN+ P ++ L + VT IACG T A V++ GK++ +G+ + QLG
Sbjct: 216 CGQLGHNSTQNELTPCLVTELVGKRVTQIACGRRHTLAYVSDLGKVFSFGSGEGGQLG 273
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANG 99
+ ++CG + ++ L++ G+L+ WG N+ +LG G P+++ +L V ++QI+ G
Sbjct: 84 IIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEHLSGVPLVQISAG 143
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+ V+SWG GQLG T N+ P +IEAL ++ V +ACGGS +A +T
Sbjct: 144 EAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFLACGGSHTALLT 203
Query: 160 EKGKLYMWGNAKDSQLG 176
+ G ++ +G K QLG
Sbjct: 204 KDGLVFTFGAGKCGQLG 220
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WGR++ G+LGLG + PS ++AL V ++CGG T +LT++G +
Sbjct: 156 VYSWGRNDC-GQLGLGHTNNKDS------PSLIEALDNQEVEFLACGGSHTALLTKDGLV 208
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA +LG P L+ LV R+ QIA G H+LA D GKVFS+G G
Sbjct: 209 FTFGAGKCGQLGHNSTQNELTPCLVTELVGKRVTQIACGRRHTLAYVSDLGKVFSFGSGE 268
Query: 120 HGQLGHSFTQNQKVPMVIEALADE---FVTHIA 149
GQLG+ T +Q +P+ ++ ++E F +H +
Sbjct: 269 GGQLGNGATHHQLIPLPMKLPSNEELKFESHTS 301
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVT 146
L + IIQI G YHSLAL+ G++F+WG +GQLG T + P ++E L+ +
Sbjct: 79 LQEKNIIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEHLSGVPLV 138
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
I+ G + S A++ +Y WG QLG+
Sbjct: 139 QISAGEAHSMALSMSRNVYSWGRNDCGQLGL 169
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 12/110 (10%)
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
G KPK + ++I + G H L L+ DGK F + Y + H+ Q
Sbjct: 29 GTRKPKCIKLGRKMKIHSMDQGAEHLLVLSSDGKPFEYNYS----IEHARFQC------- 77
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
L ++ + I CG S A+++ G+L+ WG QLGV P P
Sbjct: 78 -VLQEKNIIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTP 126
>gi|2981265|gb|AAC06339.1| similar to golgi antigen; similar to U50078 (PID:g1477565), partial
[Homo sapiens]
Length = 371
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F + LT+ G +
Sbjct: 3 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFLLALTKSGVV 55
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG V KP+++ L +I+ +A G H LA+ D G+V++WG H
Sbjct: 56 WTWGKGDYFRLGHRSDVHVRKPQVVEGLRGKKIVHVAVGAQHCLAVMDSGQVYAWGDNDH 115
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + PM+++ L + + +ACG S S A T
Sbjct: 116 GQQGNGTTTVNRKPMLVQGLEGQKIMCVACGSSHSVAWT 154
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G LALT G V++WG
Sbjct: 1 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFLLALTKSGVVWTWGK 60
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AV + G++Y WG+ Q G
Sbjct: 61 GDYFRLGHRSDVHVRKPQVVEGLRGKKIVHVAVGAQHCLAVMDSGQVYAWGDNDHGQQG 119
>gi|384501453|gb|EIE91944.1| hypothetical protein RO3G_16655 [Rhizopus delemar RA 99-880]
Length = 413
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 13/171 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LY+WG ++ E LG AG ++P K+ + ++CG T+ L+E+G ++
Sbjct: 86 LYSWGCND-EQALG--------RAGEEAVPLKIDCNDIKFVKIACGDNATLALSEQGNVY 136
Query: 62 NWGA--NSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+WG N G + + K P L P L D +I IA+G HSLAL +G+V++WGY
Sbjct: 137 SWGTYRGDNGSFGFAEDIQHQKEPLLYPFLKDKIVIDIASGANHSLALCSNGRVYAWGYN 196
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G GQLG ++ + K + +++ + V I G S AVT +LY WG
Sbjct: 197 GQGQLGRYTLPRRPKASLCCDSVGLKNVKMIGAGSYHSLAVTHNNELYAWG 247
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 21 GPNEAGGLSIPS-KVKALPVPVAA--------VSCGGFFTMVLTEEGQLWNWGANSNYEL 71
G N+AG L I + K PV + + ++CGG ++ L EG L++WG N L
Sbjct: 38 GSNDAGQLGIEDVEEKTSPVLLESLRSKDFVDIACGGMHSVALDSEGNLYSWGCNDEQAL 97
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG--YGGHGQLGHSF-T 128
GR G L + D++ ++IA G +LAL++ G V+SWG G +G G +
Sbjct: 98 GRA---GEEAVPLKIDCNDIKFVKIACGDNATLALSEQGNVYSWGTYRGDNGSFGFAEDI 154
Query: 129 QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLP 181
Q+QK P++ L D+ V IA G + S A+ G++Y WG QLG LP
Sbjct: 155 QHQKEPLLYPFLKDKIVIDIASGANHSLALCSNGRVYAWGYNGQGQLGRYTLP 207
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ G+N +LG D P LL +L + IA GG HS+AL +G ++SWG
Sbjct: 32 GKVFVCGSNDAGQLGIEDVEEKTSPVLLESLRSKDFVDIACGGMHSVALDSEGNLYSWGC 91
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
LG + + VP+ I+ +FV IACG + + A++E+G +Y WG +
Sbjct: 92 NDEQALGRA--GEEAVPLKIDCNDIKFVK-IACGDNATLALSEQGNVYSWGTYR 142
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 2 LYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG G+ G G ++ L P + + +A+ G ++ L G++
Sbjct: 135 VYSWGTYRGDNGSFGFAEDI-QHQKEPLLYPFLKDKIVIDIAS---GANHSLALCSNGRV 190
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ-IANGGYHSLALTDDGKVFSWGYGG 119
+ WG N +LGR K L + V ++ ++ I G YHSLA+T + ++++WG
Sbjct: 191 YAWGYNGQGQLGRYTLPRRPKASLCCDSVGLKNVKMIGAGSYHSLAVTHNNELYAWGLNN 250
Query: 120 HGQ---LGHSFT-QNQKVPMVIEALADEF--VTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
+ Q + SF + +VP L + F + + G S +T KG +Y +G
Sbjct: 251 YRQCVDVDDSFIFKPTRVP-----LPEHFGTIASVQGGEHFSVILTLKGDVYTFGRGDAG 305
Query: 174 QLGV 177
QLG+
Sbjct: 306 QLGL 309
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%)
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
GKVF G GQLG + + P+++E+L + IACGG S A+ +G LY WG
Sbjct: 32 GKVFVCGSNDAGQLGIEDVEEKTSPVLLESLRSKDFVDIACGGMHSVALDSEGNLYSWGC 91
Query: 170 AKDSQLGVPGLPVV 183
+ LG G V
Sbjct: 92 NDEQALGRAGEEAV 105
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 30/181 (16%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-----VAAVSCGGFFTMVLT 55
ELY WG + + + + + P++V P+P +A+V G F+++LT
Sbjct: 242 ELYAWGLNNYRQCVDV-------DDSFIFKPTRV---PLPEHFGTIASVQGGEHFSVILT 291
Query: 56 EEGQLWNWGANSNYELGRGDR---------VGGWKPKLLPNLVDV----RIIQIANGGYH 102
+G ++ +G +LG VG +P V + +I+ G
Sbjct: 292 LKGDVYTFGRGDAGQLGLSRHTIDHLKVHPVGSTHSFYIPQPTKVPLSQTVTRISAGPEF 351
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVT--HIACGGSTSAAVTE 160
LA + G+VFSWG+ +G+ QN+ P +++ FV +A GG SA +TE
Sbjct: 352 VLARSACGEVFSWGFNSGHAIGNRSDQNEPTPCLVKCSHTMFVDILQVAAGGQHSAFITE 411
Query: 161 K 161
Sbjct: 412 N 412
>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
domestica]
Length = 531
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--IVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGMVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ ++I++A G +HS+AL DG+V++WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E+Y WG + G++G G P KV L + V +++CG +M + + G
Sbjct: 148 EVYAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V ++QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 IYVTHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G++Y WG
Sbjct: 95 MVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
Length = 385
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 98/180 (54%), Gaps = 13/180 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG +P ++AL + V VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRRGAQRG-------ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L D++IIQ++ G YHSLAL+ D +VFSWG HGQ
Sbjct: 102 GSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPV 182
LG F +Q P + +L + +A GG+ S A++ G + WG+ QL + G V
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV 220
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 13/187 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKAL-PVPVAAVSCGGFFTMVLTEEG 58
++ WG EG+LG+G E +S P K+ L + + VSCG + ++ L+++
Sbjct: 95 RVFAWGAGS-EGQLGIG------EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDS 147
Query: 59 QLWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
Q+++WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 148 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGS 207
Query: 118 GGHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
GQL G + P+ + AL + V +I+CG + +A +T+ GK++ +G+ + Q
Sbjct: 208 NSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQ 267
Query: 175 LGVPGLP 181
LG P
Sbjct: 268 LGYSPTP 274
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 99/174 (56%), Gaps = 12/174 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKNS-HGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR V KP + L ++ ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGN 169
GQLG+S T ++ P ++E + D V+ I CG T A V G++ +G+
Sbjct: 262 DNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVVSFGH 314
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + P I L D + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WGA+S EL R G +LL Q A+G HSL L + +V S G
Sbjct: 3 FCWGADSR-ELQRRRTAGSPGAELL---------QAASGERHSLLLLTNHRVLSCGDNSR 52
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG Q ++P I+AL V ++CG S AV KG+++ WG + QLG+
Sbjct: 53 GQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109
>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
Length = 534
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 100/175 (57%), Gaps = 7/175 (4%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ IP K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 62 GTGDNQST--LIPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 119
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 120 NQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPR 179
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
V L + V IACG ++S AV + G++Y WG + QLG+ G V Q PV
Sbjct: 180 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL-GNNVNQLTPVR 233
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 155 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 207
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ V P + L V + QI G H+LALTD+G +++WG
Sbjct: 208 EVYGWGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 267
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 268 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 327
Query: 178 PGL 180
P L
Sbjct: 328 PHL 330
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 42 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 101
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 102 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGY 161
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 162 NNCGQVG-SGSTANQPTP 178
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD+ +VF +G LG Q+ +P +EAL + + ++ G G TE
Sbjct: 41 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTED 100
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ +Q C
Sbjct: 101 GVVYAWGHNGYSQLGNGTTNQGIAPIQVC 129
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 96/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDI-INVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++++V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIINVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 88/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + IP+ + P V CG T V+ G +
Sbjct: 4001 DVYLWG----AGRHGQLAEAGRN----VMIPAAAPSFS-PAQQVVCGQNCTFVIQANGTV 4051
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4052 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4111
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4112 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGL 4171
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4060 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4116
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4117 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN 4176
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4177 KKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGL 4224
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4212 WAFGDGDYGKLGLG------NSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYT 4265
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I IA G H+LAL+ G V++WG GQ
Sbjct: 4266 FGQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQ 4325
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4326 LGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4362
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4157 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGS 4209
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4210 MVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4269
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P + LA F+ IA G + A++ G +Y WG+ + QLG+
Sbjct: 4270 RLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGL 4328
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANG 99
+ G + T V++ +G + G S LG GD K L P+ ++
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAV 158
H+LA T +G+VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAV
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 159 TEKGKLYMWGNAKDSQLG 176
TE G+LY WG +LG
Sbjct: 527 TEDGELYTWGEGDFGRLG 544
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVGGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 4/162 (2%)
Query: 18 PGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR 76
PG N G ++ P + + + V+CGG ++ L E+G+++ G N+ +LG +R
Sbjct: 12 PGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH-ER 70
Query: 77 VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPM 135
G KP+ + L D II +A G HSLAL+D G++FSWG G GQLG T++ VP
Sbjct: 71 EGN-KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPR 129
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+I+ L + + ++CG A+ G+ + WG QLG+
Sbjct: 130 LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG E + P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLG-----KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGVNT-KGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
distachyon]
Length = 913
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 13/164 (7%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
+L+TWG D + RLG G P P L + ++CG T+ LT
Sbjct: 282 KLFTWG-DGDKHRLGHGDKEPRVKPTCVASL--------IDYDFHRIACGHSLTVGLTTS 332
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
GQ+W G +LG R G P L+ +++ ++Q+A G YH LT +VF+WG
Sbjct: 333 GQVWGMGNTVYGQLG-NPRSDGKLPCLVEDIMGENVVQVACGSYHVAVLTVKSEVFTWGK 391
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
G +G+LGH +++K+P ++E L D V HIACG + +AA+ ++
Sbjct: 392 GANGRLGHGDIEDRKIPTLVEVLRDRGVRHIACGANFTAAICQR 435
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS--IPSKVK-ALP-VPVAAVSCGGFFTMVLTE 56
ELYTWG +G +GL G G + LS IP ++ AL VA VSCG + T ++T
Sbjct: 164 ELYTWG--DGTHNIGL-LGHGTD----LSHWIPKRISGALEGQQVAYVSCGTWHTALITS 216
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD-------- 108
GQL+ +G + LG G+R P+ + +L ++ I +A G +H+ A+ +
Sbjct: 217 TGQLFTFGDGTFGVLGHGNRESIPCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSS 276
Query: 109 ---DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
GK+F+WG G +LGH + + P + +L D IACG S + +T G+++
Sbjct: 277 SISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYDFHRIACGHSLTVGLTTSGQVW 336
Query: 166 MWGNAKDSQLGVPGLPVVQPCPVE 189
GN QLG P PC VE
Sbjct: 337 GMGNTVYGQLGNPRSDGKLPCLVE 360
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 4/156 (2%)
Query: 37 LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQI 96
L + V V CG ++T+ G+++ WG S LG G R P L+ +L + +
Sbjct: 90 LVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVESLAVSNVDFV 149
Query: 97 ANGGYHSLALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGS 153
A G +H+ A+T G++++WG G H G LGH + +P I AL + V +++CG
Sbjct: 150 ACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTW 209
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
+A +T G+L+ +G+ LG + PCP E
Sbjct: 210 HTALITSTGQLFTFGDGTFGVLGHGNRESI-PCPRE 244
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L + + + + + G H+ +T +G+VF+WG G+LGH ++ P ++E+LA
Sbjct: 83 PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVESLA 142
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V +ACG + AVT G+LY WG+
Sbjct: 143 VSNVDFVACGEFHTCAVTTAGELYTWGD 170
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 28/197 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG+++G G LG N ++ P ++ K L + +SCG F +TE+G+
Sbjct: 102 EVYSWGKNKG-GILGHEDRLSFN----MTQPERIEKLLGKKIKQISCGQFHMAAVTEDGE 156
Query: 60 LWNWGANSNYELGRGDRVGGWK-------------------PKLLPNLVDVRIIQIANGG 100
++ WG +LG + + + P+ + +L +++ Q+A G
Sbjct: 157 VYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGI 216
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
++ L++DGKV+++GY +G LG+ QN P +I+ L D + I+ G S AA+T
Sbjct: 217 QFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLND--IVKISAGYSFCAAIT 274
Query: 160 EKGKLYMWGNAKDSQLG 176
++GKLY WGN ++ QLG
Sbjct: 275 KQGKLYTWGNNRNGQLG 291
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 10/178 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++YT+G ++ G LG ++ ++ P +K L + +S G F +T++G+L
Sbjct: 227 KVYTFGYNQ-YGSLGY-----VSDQNSVTTPQLIKDLN-DIVKISAGYSFCAAITKQGKL 279
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL-VDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N N +LG + KP ++ I+ ++ G ALT G++++WG+GG
Sbjct: 280 YTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGG 339
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH + P +E + + IACGGS +A +TE +LY +G + QLG+
Sbjct: 340 DGQLGHGNKSDLYAPRHVE--FKQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQLGI 395
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 29/197 (14%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG G G+LGL NE P++++ L + V G +M LT G++
Sbjct: 51 VYSWGYG-GFGQLGL-----QNE-NNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEV 103
Query: 61 WNWGANSNYELGRGDRVG--GWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++WG N LG DR+ +P+ + L+ +I QI+ G +H A+T+DG+V++WG
Sbjct: 104 YSWGKNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNK 163
Query: 119 GHGQLG-------------------HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
G+LG H + Q+ +P IE+L + +ACG + ++
Sbjct: 164 EFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLS 223
Query: 160 EKGKLYMWGNAKDSQLG 176
E GK+Y +G + LG
Sbjct: 224 EDGKVYTFGYNQYGSLG 240
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
+LYTWG + G+LG +++ + PS V + VSCG F LT++G
Sbjct: 278 KLYTWGNNR-NGQLG------NSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQG 330
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
QL+ WG + +LG G++ + P+ + +II+IA GG H+ +T+D +++ +G G
Sbjct: 331 QLYTWGFGGDGQLGHGNKSDLYAPRHVE--FKQKIIKIACGGSHAAFITEDNQLYQFGRG 388
Query: 119 GHGQLG-----HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
GQLG S + P +++ + V + CGG + A+T++
Sbjct: 389 SEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQE 436
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 4/162 (2%)
Query: 18 PGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR 76
PG N G ++ P + + + V+CGG ++ L E+G+++ G N+ +LG +R
Sbjct: 12 PGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH-ER 70
Query: 77 VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPM 135
G KP+ + L D II +A G HSLAL+D G++FSWG G GQLG T++ VP
Sbjct: 71 EGN-KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPR 129
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+I+ L + + ++CG A+ G+ + WG QLG+
Sbjct: 130 LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG E + P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLG-----KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGVNT-KGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
magnipapillata]
Length = 809
Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG-PNEAGGLSIPSKVK-ALPVPVAAVSCGGFFTMVLTEEG 58
ELYT+GR GP G E ++P KV + + AVSCG FT+ L EG
Sbjct: 478 ELYTFGRS--------GPHLGYTTEDRKQAVPRKVDFSTANKIKAVSCGLEFTIALNSEG 529
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+L+++G N +LG G +P L+ +L VRI +++ G H A+T +G V+ WG
Sbjct: 530 ELYSFGKNDCGQLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSN 589
Query: 119 GHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + +P +E + I CGGS + ++ G +Y++GN + QLGV
Sbjct: 590 EFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGNGQSGQLGV 649
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY++G+++ G+LG G E P +K L V ++ VSCG +T G
Sbjct: 530 ELYSFGKNDC-GQLGAGHFNDIEE------PYLIKHLNGVRISKVSCGSKHVGAVTVNGD 582
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W WG+N +LG P P+ + I I GG H++ L+ G V+ +G G
Sbjct: 583 VWLWGSNEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGNG 642
Query: 119 GHGQLGHSFTQNQKV---PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQLG + Q P ++ + + + CG +AAVTE G LY WGN +L
Sbjct: 643 QSGQLGVAVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTESGCLYTWGNGSRGRL 702
Query: 176 G 176
G
Sbjct: 703 G 703
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 65/111 (58%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WGA+ LG G+ P+++ L+ I +A G H+LA++ +G++FSWG G
Sbjct: 375 IYTWGASPKGVLGHGEETEELFPRVVEALLGRDIRTVACGTEHTLAVSVNGEMFSWGCGR 434
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
G+LG ++ +P+ I A + +T ++C SA+VTE G+LY +G +
Sbjct: 435 GGKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELYTFGRS 485
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 23/155 (14%)
Query: 21 GPNEAGGLSIPSKVKALPVPVAA-----------VSCGGFFTMVLTEEGQLWNWGANSNY 69
G NE G L K++A +P A + CGG T+VL+ G ++ +G +
Sbjct: 587 GSNEFGQLGT-DKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGNGQSG 645
Query: 70 ELGRGDRVGGWKPKL-------LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+LG V P + +PN + +I ++ G H+ A+T+ G +++WG G G+
Sbjct: 646 QLGVA--VNQTSPYITNPCILSMPN--NTKIAKVDCGIEHTAAVTESGCLYTWGNGSRGR 701
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
LGH Q++ VP ++E+LA + V IACG +AA
Sbjct: 702 LGHGDHQDRYVPTLVESLAYKQVQSIACGAYHTAA 736
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 16/185 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG G G+LGL +P K+ A V + VSC + +TE G+
Sbjct: 426 EMFSWGCGRG-GKLGL------KNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGE 478
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYHSLALTDDGKVFSW 115
L+ +G S LG + + +P VD +I ++ G ++AL +G+++S+
Sbjct: 479 LYTFG-RSGPHLGYTTED---RKQAVPRKVDFSTANKIKAVSCGLEFTIALNSEGELYSF 534
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G GQLG + + P +I+ L ++ ++CG AVT G +++WG+ + QL
Sbjct: 535 GKNDCGQLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEFGQL 594
Query: 176 GVPGL 180
G L
Sbjct: 595 GTDKL 599
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 88/178 (49%), Gaps = 10/178 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++YTWG +G LG G E P V+AL + V+CG T+ ++ G+
Sbjct: 374 DIYTWGASP-KGVLGHG------EETEELFPRVVEALLGRDIRTVACGTEHTLAVSVNGE 426
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG +LG + + + P + +V I ++ HS ++T+ G+++++G G
Sbjct: 427 MFSWGCGRGGKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELYTFGRSG 486
Query: 120 HGQLGHSFT-QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LG++ + Q VP ++ + ++CG + A+ +G+LY +G QLG
Sbjct: 487 -PHLGYTTEDRKQAVPRKVDFSTANKIKAVSCGLEFTIALNSEGELYSFGKNDCGQLG 543
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
D +++WG G LGH + P V+EAL + +ACG + AV+ G+++ W
Sbjct: 371 DACDIYTWGASPKGVLGHGEETEELFPRVVEALLGRDIRTVACGTEHTLAVSVNGEMFSW 430
Query: 168 GNAKDSQLGVPGL 180
G + +LG+ +
Sbjct: 431 GCGRGGKLGLKNI 443
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 4/162 (2%)
Query: 18 PGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR 76
PG N G ++ P + + + V+CGG ++ L E+G+++ G N+ +LG +R
Sbjct: 12 PGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH-ER 70
Query: 77 VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPM 135
G KP+ + L D II +A G HSLAL+D G++FSWG G GQLG T++ VP
Sbjct: 71 EGN-KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPR 129
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+I+ L + + ++CG A+ G+ + WG QLG+
Sbjct: 130 LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG E + P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLG-----KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGVNT-KGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 598
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 10/166 (6%)
Query: 21 GPNEAGGLSIPSKVKAL-PVPVAA--------VSCGGFFTMVLTEEGQLWNWGANSNYEL 71
G N+A L + + AL P+ V+A V+CG + + + G L WG+N +L
Sbjct: 95 GSNDARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQL 154
Query: 72 GRGDR-VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
G G+ +P++L + ++A G HSLALT G+V+S+G G G LGH N
Sbjct: 155 GTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNN 214
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ P +++AL E + IA G SAAV+ G+++ WG K QLG
Sbjct: 215 RAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLG 260
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV--KALPVPVAAVSCGGFFTMVLTEEG 58
L WG +E G+LG G E G + +V + A V+ G ++ LT G
Sbjct: 142 HLAAWGSNE-YGQLGTG------EVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSG 194
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
Q++++G S LG GD KP L+ L I+ IA G Y S A++ G+VF+WG
Sbjct: 195 QVYSFGEGSFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRN 254
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG+ N +P + + E +ACG A+T G++Y WG QLG
Sbjct: 255 KYGQLGNGEFGNAFLPQPVPGI--EQAVQVACGDHHCIALTRWGEVYTWGLHSSGQLG 310
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
LYTWGR + LG G GR N + P V+AL V + G + + +T +G+
Sbjct: 39 LYTWGRSD----LGQTGSGRDQNS----TAPEPVQALQGKDVVHAAGGSYNSAFVTRDGE 90
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ G+N +LG R +P + L + +A G H LA+ D+G + +WG
Sbjct: 91 LYTTGSNDARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNE 150
Query: 120 HGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG + P V++ + +A G + S A+T G++Y +G LG
Sbjct: 151 YGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALG 208
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++TWGR++ G+LG G E G +P V + V V+CG + LT G++
Sbjct: 247 RVFTWGRNK-YGQLGNG------EFGNAFLPQPVPGIEQAVQ-VACGDHHCIALTRWGEV 298
Query: 61 WNWGANSNYELGRGDRVGG-------WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
+ WG +S+ +LG+G +G P + +L D I Q++ G HS ++ +++
Sbjct: 299 YTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQLW 358
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
G GQL + +P + L + G S AV ++
Sbjct: 359 GAGANDEGQLALQSVPSVALPTRVPGLPGLPMRFAVAAGDHSIAVLDE 406
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG + + G G P+ + L ++ A G Y+S +T DG++++ G
Sbjct: 39 LYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSND 98
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG + P+ + AL V +ACG AV + G L WG+ + QLG
Sbjct: 99 ARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGT 156
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 100/182 (54%), Gaps = 14/182 (7%)
Query: 1 ELYTWGRDEG-EGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTE 56
+LY G EG GRLGLG + ++ P ++ +L + AV GG M LT
Sbjct: 3038 KLYACG--EGTNGRLGLG------HSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTL 3089
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+G++++WG + +LG +R+ +PK++ L RI IA G HS A++ G++F+WG
Sbjct: 3090 DGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWG 3149
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQ 174
G +G+LGH Q P +++AL + +ACG + + A++ +G ++ WG+ +
Sbjct: 3150 LGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGK 3209
Query: 175 LG 176
LG
Sbjct: 3210 LG 3211
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 95/179 (53%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG +G GRLG G ++ P+K+ L V +SCG ++ +T G+
Sbjct: 541 DVYSWGNGDG-GRLGHGDNNSRDQ------PTKITELVGKNVIHISCGATYSAAVTSSGE 593
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGY 117
++ WG + LG G P L+ L D I+ IA +G +LA+T+ G VFSWG
Sbjct: 594 VYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGD 653
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GG+G+LG + K P +IE L D V + CG S A+T+ G +Y WG + +LG
Sbjct: 654 GGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLG 712
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG RG +E G IP ++ L + V + CG F++ LT+ GQ+
Sbjct: 3199 VFSWG-DGDFGKLG----RGGSE--GCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQV 3251
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G KP L+ +L + +I+ +A G H L TD G+V++WG H
Sbjct: 3252 YTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDH 3311
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ + P ++ L V +ACG S S A T
Sbjct: 3312 GQQGNGTILVNRKPSLVLNLEGVRVNRVACGSSHSIAWT 3350
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEE 57
EL+TWG E GRLG G P VKAL + V+CG T+ L+ E
Sbjct: 3144 ELFTWGLGE-YGRLGHGDNLTQLR------PKLVKALLGHHIVQVACGSRDAQTLALSAE 3196
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L + + I G SLALT G+V++WG
Sbjct: 3197 GLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGK 3256
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P ++E+L+++ + H+A G T++G++Y WG+ Q G
Sbjct: 3257 GDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQG 3315
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ +G++++WG + +LG G++ G P+L+ L
Sbjct: 4045 TLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDAL 4104
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
I+ IA GG HS A+T G++++WG G +G+LGH +++Q P ++E L V I
Sbjct: 4105 QGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDI 4164
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4165 ACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4194
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
A G ++ L+ +G +++WG LG GD +P + LV +I I+ G +
Sbjct: 525 AAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATY 584
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S A+T G+V++WG G +G+LGH +++ VP ++ L D F+ IACG + + AVT
Sbjct: 585 SAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTN 644
Query: 161 KGKLYMWGN 169
G ++ WG+
Sbjct: 645 TGLVFSWGD 653
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
E+YTWGR GRLG G ++P+ V L + ++CG T+ +T
Sbjct: 593 EVYTWGRG-NYGRLGHGTSEDH------TVPTLVVGLKDYFIVDIACGSGDAQTLAVTNT 645
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LG G G PKL+ L D+ + ++ G SLALT G V++WG
Sbjct: 646 GLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGK 705
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++E L + + +A G A+T+ G++Y WG + Q+G
Sbjct: 706 GDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVG 764
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
E+YTWG+ GR G LG G ++ P V+ L V ++CG T+ +T+
Sbjct: 4127 EIYTWGK----GRYGRLGHGDSEDQMK----PKLVETLIGFKVIDIACGSGDAQTLCITD 4178
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4179 DDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWG 4238
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH ++ + P I AL + + IA G A ++ G+++ WG+ + QLG
Sbjct: 4239 KGDYHRLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLG 4298
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 25 AGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+ G P ++ L + VA V CG F++ LT+ G ++ WG N+ LG G PK
Sbjct: 664 SDGSKTPKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPK 723
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
L+ L I ++A G H LALTDDG+V+ WG +GQ+G + N P ++ L +
Sbjct: 724 LVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGK 783
Query: 144 FVTHIACGGSTSAA 157
+ I CG + S A
Sbjct: 784 NIVDIDCGPNQSIA 797
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G IP K+++L + V V CG F++ LT G +
Sbjct: 4182 VWSWG-DGDYGKLGRGG------SDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSV 4234
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G PK + L +II IA G H +A +D G+VF+WG
Sbjct: 4235 YTWGKGDYHRLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDE 4294
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG P ++ L + + +ACG + S A
Sbjct: 4295 GQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAHSLA 4331
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 59 QLWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+++ WG N +LG +G +V P +L ++ I IA G ++ DGK+++ G
Sbjct: 2986 KVFVWGLNDKDQLGGLKGSKVK--VPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACG 3043
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQ 174
G +G+LG + N P + +L + +A GG + A+T GK++ WG +D +
Sbjct: 3044 EGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGK 3103
Query: 175 LG 176
LG
Sbjct: 3104 LG 3105
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 6/123 (4%)
Query: 58 GQLWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
G ++ WG N +LG G +V P L +R +Q+ G LA+T DGKV++
Sbjct: 3968 GTIYGWGHNHRGQLGGVEGPKVK--IPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYAT 4025
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDS 173
GYG G+LG T P ++E++ F+ +A GG A++ GK+Y WG D
Sbjct: 4026 GYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDG 4085
Query: 174 QLG 176
+LG
Sbjct: 4086 KLG 4088
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
KVF WG QLG KVP+ E+L HIA G + V+ GKLY G
Sbjct: 2986 KVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEG 3045
Query: 171 KDSQLGV-PGLPVVQPCPV 188
+ +LG+ V PC +
Sbjct: 3046 TNGRLGLGHSNNVATPCQL 3064
>gi|380018612|ref|XP_003693221.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
florea]
Length = 541
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK 111
+ LT+EG++++WG N +YELG P ++ NL + I+ +A G +HSLALT+DG+
Sbjct: 90 LALTKEGKVYSWGQNCHYELGNTFGSQALTPAIITNLCNEFIVDVACGSHHSLALTNDGE 149
Query: 112 VFSWGYGGHGQLG-HSFTQ-NQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
V++WG GQ+G H T Q +P + L + V I+CG S S VT G++Y WG
Sbjct: 150 VYAWGQNTSGQVGCHDITTLVQDIPRKLNFTLTGKKVICISCGDSFSVVVTNNGEVYSWG 209
Query: 169 NAKDSQLGVPG 179
QLG+
Sbjct: 210 RNDVGQLGIEN 220
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 2/138 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+++T + ++ G+N++ LG GD PK + L I A G G H LALT +G
Sbjct: 37 LIVTNDKMVYAVGSNTSGCLGTGDTQSTLYPKKIKELCGKDIKTFAYGKGPHVLALTKEG 96
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
KV+SWG H +LG++F P +I L +EF+ +ACG S A+T G++Y WG
Sbjct: 97 KVYSWGQNCHYELGNTFGSQALTPAIITNLCNEFIVDVACGSHHSLALTNDGEVYAWGQN 156
Query: 171 KDSQLGVPGL-PVVQPCP 187
Q+G + +VQ P
Sbjct: 157 TSGQVGCHDITTLVQDIP 174
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV--PVAAVSCGGFFTMVLTEEG 58
E+Y WG++ G++G + IP K+ V +SCG F++V+T G
Sbjct: 149 EVYAWGQNTS-GQVGCHDITTLVQ----DIPRKLNFTLTGKKVICISCGDSFSVVVTNNG 203
Query: 59 QLWNWGANSNYELG-RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++++WG N +LG + + P + L V I ++ G H+LAL+D+G ++ WG
Sbjct: 204 EVYSWGRNDVGQLGIENNNNDQFHPCRITALTKVVIEKVVCGSIHTLALSDEGVLYVWGA 263
Query: 118 GGHGQLGHS---FTQNQKVPMVIEALADEFVTHIACG--GSTSAAVTEKGKLYMWGNAKD 172
+GQLG + N P +E V IA S A+ E +++MWG
Sbjct: 264 NNYGQLGLTTVLLNTNIWKPTKLEVPEMRRVLDIATSYYNYISIALCEGNRIFMWGQCLG 323
Query: 173 SQLGVPGL 180
+ VP L
Sbjct: 324 QNVKVPTL 331
>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
Length = 1319
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 834 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 893
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 894 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 953
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 954 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 983
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P ++AL + ++CG + LT G+L+ WG LG GD KPK++ L+
Sbjct: 6 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 65
Query: 90 DVRIIQIANGGY--HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
R+IQ+A G +LALTD+G VFSWG G G+LG ++ +P IE L + V
Sbjct: 66 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 125
Query: 148 IACGGSTSAAVTEKG-----KLYMWGNAKDSQLG 176
I CG S A+T+ G ++Y WG+ Q G
Sbjct: 126 IECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQG 159
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 916 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 968
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 969 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 1028
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 1029 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 1087
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 971 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 1023
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 1024 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 1083
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 1084 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1120
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 83/167 (49%), Gaps = 15/167 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 35 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 87
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG-----KV 112
G +++WG +LGRG G P+ + L + QI G SLALT G +V
Sbjct: 88 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWQV 147
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
++WG HGQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 148 YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 194
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
KP+L+ L RI IA G HS ALT G++++WG G +G+LGH Q P +++ L
Sbjct: 5 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64
Query: 141 ADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 65 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 102
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 757 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 816
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 817 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 876
Query: 176 G 176
G
Sbjct: 877 G 877
>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 530
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 87/158 (55%), Gaps = 7/158 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LY++G+++ G+LGL G P + +A V ++CG + T+ L+ G++
Sbjct: 234 LYSFGKND-HGQLGLEGGESR------FTPVQHRACTSVVEQLACGYYHTVALSRAGEVV 286
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+G N +LG G R W+ +P+L +RIIQ+A G YH+++L D+G+V+ +G HG
Sbjct: 287 AFGRNDYGQLGLGHRESTWQGGQVPDLAGLRIIQVACGSYHTISLDDEGRVYPFGRNNHG 346
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
QLG ++ P +E L+ FV +A G + +T
Sbjct: 347 QLGTGTREDACRPCFVEGLSQSFVCQVAAGFYHTLCLT 384
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAG-GLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
EL T GR+ G+LG G E G G S+P V V V+C T+V+T++
Sbjct: 128 ELQTCGRNN-SGQLGHG------EVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVVTDDD 180
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G N +LG GD P L + ++ +A G YH++ G ++S+G
Sbjct: 181 RTWTFGGNGYGQLGHGDHSSRSAPAALACFQGLGVLSVACGVYHTVVSVASGGLYSFGKN 240
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
HGQLG +++ P+ A V +ACG + A++ G++ +G QLG+
Sbjct: 241 DHGQLGLEGGESRFTPVQHRACT-SVVEQLACGYYHTVALSRAGEVVAFGRNDYGQLGL 298
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 1 ELYTWGRDEGEGRLGLG------PGRGPNEAG-GLSIPSKVKALPVPVAAVSCGGFFTMV 53
E+Y+ G + EG+ G+G P P+ L PS A V + G +V
Sbjct: 64 EVYSCGYNS-EGQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVV 122
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
+TEEG+L G N++ +LG G+ G+ P+ + R+ ++A H++ +TDD +
Sbjct: 123 VTEEGELQTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRT 182
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+++G G+GQLGH ++ P + V +ACG + G LY +G
Sbjct: 183 WTFGGNGYGQLGHGDHSSRSAPAALACFQGLGVLSVACGVYHTVVSVASGGLYSFGKNDH 242
Query: 173 SQLGVPG 179
QLG+ G
Sbjct: 243 GQLGLEG 249
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP---NLVDVRIIQIA 97
V +V+CG + T+V G L+++G N + +LG + G + + P + Q+A
Sbjct: 215 VLSVACGVYHTVVSVASGGLYSFGKNDHGQLG----LEGGESRFTPVQHRACTSVVEQLA 270
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
G YH++AL+ G+V ++G +GQLG ++ + LA + +ACG + +
Sbjct: 271 CGYYHTVALSRAGEVVAFGRNDYGQLGLGHRESTWQGGQVPDLAGLRIIQVACGSYHTIS 330
Query: 158 VTEKGKLYMWGNAKDSQLGV-PGLPVVQPCPVE 189
+ ++G++Y +G QLG +PC VE
Sbjct: 331 LDDEGRVYPFGRNNHGQLGTGTREDACRPCFVE 363
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 20/114 (17%)
Query: 1 ELYTWGRDEGEGRLGLGP-------GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMV 53
E+ +GR++ G+LGLG G+ P+ AG + + V+CG + T+
Sbjct: 284 EVVAFGRND-YGQLGLGHRESTWQGGQVPDLAG------------LRIIQVACGSYHTIS 330
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
L +EG+++ +G N++ +LG G R +P + L + Q+A G YH+L LT
Sbjct: 331 LDDEGRVYPFGRNNHGQLGTGTREDACRPCFVEGLSQSFVCQVAAGFYHTLCLT 384
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
+E +L+ +G N+ ELG GD + P L I+ + G + LT+ G+V+S
Sbjct: 9 QERELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSC 68
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALAD------EF-------VTHIACGGSTSAAVTEKG 162
GY GQ G ++ VP ++ +L F + H G VTE+G
Sbjct: 69 GYNSEGQCGIG-EIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEG 127
Query: 163 KLYMWGNAKDSQLG 176
+L G QLG
Sbjct: 128 ELQTCGRNNSGQLG 141
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTE-EGQ 59
L TWGR E +G+LG G +A +P+ + P + +V CG T +E E Q
Sbjct: 35 LCTWGRGE-DGQLGHG------DAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQ 87
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG LG G+ + P+ + L ++I Q+A G H LA+T G+V SWG
Sbjct: 88 VYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQ 147
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG T++ +P I+A V IA G +AAVTE G +Y WG + LG+
Sbjct: 148 NGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGL 205
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 96/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG +P ++A + V ++ G T +TE+G
Sbjct: 139 EVLSWGRNQ-NGQLGLGTTEDS------LLPQTIQAFEGISVKMIAAGAEHTAAVTEDGD 191
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG LG GDR + P+ + ++ +++ +A G H++ ++ G ++++G+
Sbjct: 192 IYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSK 251
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH ++ VP +EAL D + I+ G + A+T GKLY WG K Q+G
Sbjct: 252 YGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGA 309
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GRLG G + + P VKAL + + ++CG + +T G+
Sbjct: 87 QVYSWGWGD-FGRLGHG------NSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGE 139
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G P+ + + + IA G H+ A+T+DG ++ WG+G
Sbjct: 140 VLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGR 199
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + ++ + + +ACG + V+ G LY +G +K QLG
Sbjct: 200 YGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLG 256
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 10/173 (5%)
Query: 5 WGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNW 63
WGR G LGLG + +P KV ++ + V+CG T+ ++ G L+ +
Sbjct: 197 WGR---YGNLGLG------DRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTY 247
Query: 64 GANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL 123
G + +LG GD P + L D QI+ G H++ALT DGK++ WG+ GQ+
Sbjct: 248 GWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQV 307
Query: 124 GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + P + ++ V +ACG + A TEK ++ WG QLG
Sbjct: 308 GAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLG 360
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P KV+AL + GG+ TM LT +G+L+ WG N ++G GD P +
Sbjct: 265 VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFP 324
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
+ ++ Q+A G H+LA T+ VF+WG G GQLGH ++ P++I+AL+
Sbjct: 325 EEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALS 377
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P V VS G ++ L L WG + +LG GD P ++ I +
Sbjct: 13 PPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVI 72
Query: 98 NGGYHSLALT-DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
G H+ A + D+ +V+SWG+G G+LGH + + P ++AL + +ACG S
Sbjct: 73 CGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCL 132
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
AVT G++ WG ++ QLG+
Sbjct: 133 AVTMAGEVLSWGRNQNGQLGL 153
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 89/178 (50%), Gaps = 7/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
L++WG D G+LG+G P+++ +L VP+ V+CGGF + LT G
Sbjct: 161 RLFSWG-DNTYGQLGIGTL----VTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGS 215
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG G++ P LL N+ + IA G H+ LT DG VF +G G
Sbjct: 216 VFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGS 275
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT-EKGKLYMWGNAKDSQLG 176
GQLGH N+ P + L +T + CG + + KG+LY +G QLG
Sbjct: 276 EGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLG 333
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 89/178 (50%), Gaps = 7/178 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
L++WG D G+LG+G P+++ +L VP+ V+CGGF + LT G
Sbjct: 501 RLFSWG-DNTYGQLGIGTL----VTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGS 555
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG G++ P LL N+ + IA G H+ LT DG VF +G G
Sbjct: 556 VFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGS 615
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT-EKGKLYMWGNAKDSQLG 176
GQLGH N+ P + L +T + CG + + KG+LY +G QLG
Sbjct: 616 EGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLG 673
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 81/152 (53%), Gaps = 5/152 (3%)
Query: 31 PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYE--LGRGDRVGGWKPKLLPN 87
P +V AL V + V+CG T+ +++ GQ+ WG N + L GD +P++L +
Sbjct: 78 PVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKH 137
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALADEFV 145
L + +++ G HS+ALT DG++FSWG +GQL G T P + +L +
Sbjct: 138 LASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPL 197
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ACGG S A+T G ++ WG QLG+
Sbjct: 198 VRVACGGFHSFALTISGSVFGWGKNDVGQLGL 229
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLW 61
+ WG EG+LG+G G + +V L V ++SCG T ++ ++G L+
Sbjct: 4 FCWG-SSMEGQLGIGITGGQTTQ---EVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLY 59
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
GANS +LG+ DR +KP + L V I +A G H+LA++D G+V WG G
Sbjct: 60 MCGANSKGQLGQ-DR-NQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRG 117
Query: 122 QLGHSF--TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
Q G + +N+ P +++ LA + CG S A+T G+L+ WG+ QLG+
Sbjct: 118 QCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGI 175
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYE--LGRGDRVGGWKPKLLPNLVDVRIIQI 96
V + V+CG T+ +++ Q+ WG N + L GD +P++L +L + +++
Sbjct: 427 VVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKV 486
Query: 97 ANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALADEFVTHIACGGST 154
G HS+ALT DG++FSWG +GQL G T P + +L + +ACGG
Sbjct: 487 CCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFH 546
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
S A+T G ++ WG QLG+
Sbjct: 547 SFALTISGSVFGWGKNDVGQLGL 569
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF--TQNQKVPMVIEALADEFV 145
L V I +A G H+LA++D +V WG GQ G + +N+ P ++ LA
Sbjct: 424 LETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQF 483
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ CG S A+T G+L+ WG+ QLG+
Sbjct: 484 VKVCCGSLHSMALTRDGRLFSWGDNTYGQLGI 515
>gi|351703184|gb|EHB06103.1| RCC1 and BTB domain-containing protein 1 [Heterocephalus glaber]
Length = 467
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TEEG ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEALCGKKIKSLSYGSGPHVLLSTEEGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G I L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLG NQ P+ + AL H C T+ G +YMWG + + +P L
Sbjct: 211 GQLGLGNNGNQLTPVRVAAL------HSVCVNQ-----TQGGHVYMWGQCRGQSVILPHL 259
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T++G
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEEG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD+ +VF +G LG Q+ VP +EAL + + ++ G G TE+
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEE 93
Query: 162 GKLYMWGNAKDSQLG 176
G +Y WG+ SQLG
Sbjct: 94 GVVYAWGHNGYSQLG 108
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D II +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIIHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAGS-DGQLGL-----MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKNS-HGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 19/196 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHEREGNKPEQIGALA--------DQHIIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGVPGLPVVQ-PCPVE 189
LG+ + PC V+
Sbjct: 222 LGLSDEKDRESPCHVK 237
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 20/160 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHI 148
GQLG T N K P ++ A AD F HI
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHI 363
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG G G KP+ + L D I+ +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGRE--GNKPEQIGALADQHIVHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 96/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G D P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGKDF-PSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 97/183 (53%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGLG-PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHGREGNKPEQIGALADQH--------IVHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKDFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEEDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA 149
GQLG T N K P ++ A AD F HI
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHRGQLSATADRFKYHIV 364
>gi|328868228|gb|EGG16606.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1076
Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 97/191 (50%), Gaps = 24/191 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK--------------ALPVPVAAVSCG 47
+Y WG + G+ GL P + L P++VK + V + ++SCG
Sbjct: 328 VYAWGSNR-NGQCGL-----PLDYPILHQPTRVKIEYNQTNNNSNNNTSTFVIIGSISCG 381
Query: 48 GFFTM-VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
++ V QL++WG S+ +LG G R P +P I++I G YH++AL
Sbjct: 382 YSHSVAVQAHSSQLYSWGKGSDGQLGLGSRSDHSSPTAIPLFTSDPIVRICCGHYHTVAL 441
Query: 107 TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD-EFVTHIACGGSTSAAVTEKGKLY 165
T K++SWG G LGH +++ VP +IEA + V +IACG S +A +TEKGK
Sbjct: 442 TSQSKLYSWGMG--FALGHGQAKDKLVPTLIEAFSPCTKVVNIACGFSHTAVLTEKGKCL 499
Query: 166 MWGNAKDSQLG 176
+G+ QLG
Sbjct: 500 TFGHGDHGQLG 510
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 29/164 (17%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV----PVAAVSCGGFFTMVLTE 56
+LY+WG+ +G+LGLG S S A+P+ P+ + CG + T+ LT
Sbjct: 394 QLYSWGKGS-DGQLGLG---------SRSDHSSPTAIPLFTSDPIVRICCGHYHTVALTS 443
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD-----VRIIQIANGGYHSLALTDDGK 111
+ +L++WG + LG G K KL+P L++ +++ IA G H+ LT+ GK
Sbjct: 444 QSKLYSWGMG--FALGHGQA----KDKLVPTLIEAFSPCTKVVNIACGFSHTAVLTEKGK 497
Query: 112 VFSWGYGGHGQLGHSFTQNQK----VPMVIEALADEFVTHIACG 151
++G+G HGQLG+ +N+ VP+ + ++ I+CG
Sbjct: 498 CLTFGHGDHGQLGYFNKKNESTSSLVPITPNGIDQLQISSISCG 541
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW------KPKLLPNLVDVRIIQIA 97
+S G +++T G +++WG+NS +LG GD K LL L + IQ+A
Sbjct: 97 LSSGHNHQLLITSGGDIYSWGSNSKGQLGHGDISHNHQIEPIRKFSLLKALYGIVPIQVA 156
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
G S+ LT +G V+S+G GQLG+ + VI
Sbjct: 157 AGNEFSMVLTSEGTVYSFGVSNEGQLGNLYDSYNTSSTVI 196
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 15/111 (13%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ---NQKVPMVIE 138
P+ + L V+I +A G H+L+LT DG V++WG +GQ G +Q + IE
Sbjct: 298 PRRIGTLDGVQITMVACGSKHTLSLTCDGAVYAWGSNRNGQCGLPLDYPILHQPTRVKIE 357
Query: 139 ALADE-----------FVTHIACGGSTSAAV-TEKGKLYMWGNAKDSQLGV 177
+ I+CG S S AV +LY WG D QLG+
Sbjct: 358 YNQTNNNSNNNTSTFVIIGSISCGYSHSVAVQAHSSQLYSWGKGSDGQLGL 408
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKV-PM----VIEALADEFVTHI 148
Q+++G H L +T G ++SWG GQLGH + N ++ P+ +++AL +
Sbjct: 96 QLSSGHNHQLLITSGGDIYSWGSNSKGQLGHGDISHNHQIEPIRKFSLLKALYGIVPIQV 155
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A G S +T +G +Y +G + + QLG
Sbjct: 156 AAGNEFSMVLTSEGTVYSFGVSNEGQLG 183
Score = 38.9 bits (89), Expect = 0.99, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP-GLPVV-Q 184
+ Q +P I L +T +ACG + ++T G +Y WG+ ++ Q G+P P++ Q
Sbjct: 291 WNHTQPIPRRIGTLDGVQITMVACGSKHTLSLTCDGAVYAWGSNRNGQCGLPLDYPILHQ 350
Query: 185 PCPVE 189
P V+
Sbjct: 351 PTRVK 355
>gi|118375248|ref|XP_001020809.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila]
gi|89302576|gb|EAS00564.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila
SB210]
Length = 4058
Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 28 LSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP- 86
+ +P + V + CG F ++LT Q+ WG NS +G GD KPK++
Sbjct: 248 VQLPKGIGGRKTFVVQICCGLNFCLILTYNFQVLAWGDNSYGNIGTGDLDYQEKPKIIQF 307
Query: 87 ---NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LAD 142
D RI I+ G H A++ GK+++WG G GQLGH N +P +++ L +
Sbjct: 308 DENKGDDSRIQFISCGANHCAAVSLSGKLYTWGQGIQGQLGHQNVMNLSIPTAVKSELQE 367
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ V +++CGG+ + +T +G Y +GN K+ QLG+
Sbjct: 368 KKVVYVSCGGAHTVCLTNEGYAYSFGNNKNGQLGL 402
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/156 (35%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL----PNLVDVRIIQI 96
V ++CG F M+LT QL++WG N + LG GD KP L+ VR I
Sbjct: 2333 VIQIACGWSFCMILTRSHQLFSWGDNRSGNLGLGDTRYRIKPSLVLLEFGKPFQVRFIDC 2392
Query: 97 ANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTS 155
HS A+ DGK+++WG G +GQLG + N +P + L + +T ++CG
Sbjct: 2393 Q--AQHSAAIQLDGKLYTWGQGLNGQLGINAQSNMLLPQRVGGILEQKNITQVSCGVFHM 2450
Query: 156 AAVTEKGKLYMWGNAKDSQLGV-PGLPVVQ-PCPVE 189
A +T G Y WG+ + QLG+ LP + PC VE
Sbjct: 2451 ACITNDGFCYTWGSNTNGQLGLDKDLPQINYPCVVE 2486
Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK---ALPVPVAAVSCGGFFTMVLTEE 57
+L++WG D G LGLG R + PS V P V + C + + +
Sbjct: 2351 QLFSWG-DNRSGNLGLGDTRYRIK------PSLVLLEFGKPFQVRFIDCQAQHSAAIQLD 2403
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-IIQIANGGYHSLALTDDGKVFSWG 116
G+L+ WG N +LG + P+ + +++ + I Q++ G +H +T+DG ++WG
Sbjct: 2404 GKLYTWGQGLNGQLGINAQSNMLLPQRVGGILEQKNITQVSCGVFHMACITNDGFCYTWG 2463
Query: 117 YGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+GQLG Q P V+E L F+ + CG + + ++ G+LY G+ + +++
Sbjct: 2464 SNTNGQLGLDKDLPQINYPCVVERLQSYFIIQVTCGYNNTFFFSQNGRLYGCGSNQHNKI 2523
Query: 176 GV 177
G+
Sbjct: 2524 GL 2525
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYH 102
+SCG ++ G+L+ WG +LG + + P + + L + +++ ++ GG H
Sbjct: 320 ISCGANHCAAVSLSGKLYTWGQGIQGQLGHQNVMNLSIPTAVKSELQEKKVVYVSCGGAH 379
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
++ LT++G +S+G +GQLG + + VP+ I+ L + F+ ++ CG + + +T+ G
Sbjct: 380 TVCLTNEGYAYSFGNNKNGQLGLGDQEQRNVPVKIQKLQNYFIVNVVCGMNNTFILTQVG 439
Query: 163 KLYMWGNAKDSQLGVPGL 180
K++ G+ + ++LG+ L
Sbjct: 440 KIFACGSNQHNKLGLDQL 457
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 23/192 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA--LPVPVAAVSCGGFFTMVLTEEG 58
+LYTWG+ G+ G LSIP+ VK+ V VSCGG T+ LT EG
Sbjct: 335 KLYTWGQ-------GIQGQLGHQNVMNLSIPTAVKSELQEKKVVYVSCGGAHTVCLTNEG 387
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++G N N +LG GD+ P + L + I+ + G ++ LT GK+F+ G
Sbjct: 388 YAYSFGNNKNGQLGLGDQEQRNVPVKIQKLQNYFIVNVVCGMNNTFILTQVGKIFACGSN 447
Query: 119 GHGQLG--HSFTQNQKV--PMVIEA----------LADEFVTHIACGGSTSAAVTEKGKL 164
H +LG F Q P+ ++ L D ++ IA + A++ +G L
Sbjct: 448 QHNKLGLDQLFYQKDNFLNPIDLDINFLKGVNNPNLKDVYIYQIAASPHFTYALSNQGLL 507
Query: 165 YMWGNAKDSQLG 176
WG + LG
Sbjct: 508 TTWGLQVNDCLG 519
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 30/190 (15%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPV-AAVSCGGFFTMVLTEEGQL 60
+Y WGR+ +G+LG+G + E+ P V L + A++CG T+ LT+ GQ+
Sbjct: 678 VYAWGRNT-DGQLGIGKTQYYVES-----PQMVLGLEGNLMKAIACGENHTLFLTDTGQV 731
Query: 61 WNWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-------- 111
++ G++ + +LG G+R +P+L+ NL V QI+ G HS+AL D
Sbjct: 732 YSCGSSKDGKLGLGNRTNTQLQPQLITNLSKVE--QISCGQSHSMALAQDDFFKQDDDEE 789
Query: 112 ----------VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
V++WG +LGH +N P I+ ++ +I+ G SAA+T
Sbjct: 790 HARQINVKMVVYTWGNAWESKLGHGDRENLYEPTKIQ--SNYLFKYISAGSHHSAALTTD 847
Query: 162 GKLYMWGNAK 171
L +WG K
Sbjct: 848 DNLVVWGPYK 857
Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 33/190 (17%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y WG+++ +G+LG+G + + P++V+ L + + V+CG T+ L+EEG
Sbjct: 2747 KVYGWGKND-QGQLGIGA-----ISTIVHKPTEVQGLEGLLMKQVACGQVHTLFLSEEGC 2800
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDD-------- 109
+++ G+ ++ +LG G R +L P + +I ++A G HSLAL +D
Sbjct: 2801 VYSCGSPTDGKLGLGKRDA---IQLFPMKIQSLAKIDKVACGYTHSLALGEDVYVDEDFD 2857
Query: 110 -----------GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
V+SWG +LGH +N P I+ A+ I GG SAA+
Sbjct: 2858 DFNLLQNEFNKKVVYSWGSAYESKLGHGEKENLFEPNRIQ--ANFSFRDIFAGGHHSAAI 2915
Query: 159 TEKGKLYMWG 168
++ L +WG
Sbjct: 2916 DKEHNLIVWG 2925
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 29 SIPSKVKALPVP----VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPK 83
S+PS V + V+ ++CG + M + +++ WG N +LG G KP
Sbjct: 2713 SLPSLVNFFDIKENRRVSFIACGAEYCMAIENRRKVYGWGKNDQGQLGIGAISTIVHKPT 2772
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN-QKVPMVIEALAD 142
+ L + + Q+A G H+L L+++G V+S G G+LG Q PM I++LA
Sbjct: 2773 EVQGLEGLLMKQVACGQVHTLFLSEEGCVYSCGSPTDGKLGLGKRDAIQLFPMKIQSLAK 2832
Query: 143 EFVTHIACGGSTSAAVTE-------------------KGKLYMWGNAKDSQLG 176
+ +ACG + S A+ E K +Y WG+A +S+LG
Sbjct: 2833 --IDKVACGYTHSLALGEDVYVDEDFDDFNLLQNEFNKKVVYSWGSAYESKLG 2883
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV-----------------GGWKPK 83
+ + G F TM LT G+++ WG+N + G + +
Sbjct: 583 IVDIELGVFHTMALTNAGEIYVWGSNQMCQHGCISNIIRQEYDESNEKNINIIQNDISKE 642
Query: 84 LLPNLVDV-------RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPM 135
LP++V RI IA G + +A+ + V++WG GQLG TQ + P
Sbjct: 643 TLPSVVSFFNIKENRRITYIAAGYEYCMAIENKRLVYAWGRNTDGQLGIGKTQYYVESPQ 702
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
++ L + IACG + + +T+ G++Y G++KD +LG+
Sbjct: 703 MVLGLEGNLMKAIACGENHTLFLTDTGQVYSCGSSKDGKLGL 744
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 25/171 (14%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-----------------RVGGWKPKLLP 86
V G F +M LT G+L+ WG+N + + D V LP
Sbjct: 2656 VQLGTFHSMALTNAGELYIWGSNESSQHAVDDLQIEQAYVDQAISKIKINVQTLVTSSLP 2715
Query: 87 NLVDV-------RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIE 138
+LV+ R+ IA G + +A+ + KV+ WG GQLG + + P ++
Sbjct: 2716 SLVNFFDIKENRRVSFIACGAEYCMAIENRRKVYGWGKNDQGQLGIGAISTIVHKPTEVQ 2775
Query: 139 ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
L + +ACG + ++E+G +Y G+ D +LG+ +Q P++
Sbjct: 2776 GLEGLLMKQVACGQVHTLFLSEEGCVYSCGSPTDGKLGLGKRDAIQLFPMK 2826
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 26/178 (14%)
Query: 23 NEAGGLSIPSKVKALPVP----VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RV 77
N+ ++PS V + + ++ G + M + + ++ WG N++ +LG G +
Sbjct: 637 NDISKETLPSVVSFFNIKENRRITYIAAGYEYCMAIENKRLVYAWGRNTDGQLGIGKTQY 696
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMV 136
P+++ L + IA G H+L LTD G+V+S G G+LG + T Q P +
Sbjct: 697 YVESPQMVLGLEGNLMKAIACGENHTLFLTDTGQVYSCGSSKDGKLGLGNRTNTQLQPQL 756
Query: 137 IEALADEFVTHIACGGSTSAAVTE------------------KGKLYMWGNAKDSQLG 176
I L+ V I+CG S S A+ + K +Y WGNA +S+LG
Sbjct: 757 ITNLSK--VEQISCGQSHSMALAQDDFFKQDDDEEHARQINVKMVVYTWGNAWESKLG 812
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 24/140 (17%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLW 61
Y++G ++ G+LGLG N +P K++ L + V CG T +LT+ G+++
Sbjct: 390 YSFGNNK-NGQLGLGDQEQRN------VPVKIQKLQNYFIVNVVCGMNNTFILTQVGKIF 442
Query: 62 NWGANSNYELGRGDRVGGWKPKLL---------------PNLVDVRIIQIANGGYHSLAL 106
G+N + +LG D++ K L PNL DV I QIA + + AL
Sbjct: 443 ACGSNQHNKLGL-DQLFYQKDNFLNPIDLDINFLKGVNNPNLKDVYIYQIAASPHFTYAL 501
Query: 107 TDDGKVFSWGYGGHGQLGHS 126
++ G + +WG + LG S
Sbjct: 502 SNQGLLTTWGLQVNDCLGRS 521
Score = 36.6 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 30/188 (15%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y+WG E +LG G E L P++++A + GG + + +E L
Sbjct: 2871 VYSWG-SAYESKLGHG------EKENLFEPNRIQA-NFSFRDIFAGGHHSAAIDKEHNLI 2922
Query: 62 NWGA----------NSNYELGRGDRVGGWKPKLLPNLVDVRIIQ-IANGGYHSLALTDDG 110
WG N + R D +P L P ++ +Q +A G +S+ L +
Sbjct: 2923 VWGPYIYFGYQKPEEKNKKNYRQDVNEFIRPTLHPRQQLIQQVQKVALGDKYSIVLNNIN 2982
Query: 111 KVFSWG-----YGGHGQLGHSFTQNQ---KVPMVIEAL--ADEFVTHIACGGSTSAAVTE 160
++F WG Y + + T+NQ + + I+ + +T IA + AA+
Sbjct: 2983 QIFQWGVFDKTYENKCKENPNLTRNQINESLMINIQKINAPSSTITQIAVA-NNHAALIS 3041
Query: 161 KGKLYMWG 168
K +LY WG
Sbjct: 3042 KNQLYTWG 3049
>gi|17510153|ref|NP_490834.1| Protein HERC-1 [Caenorhabditis elegans]
gi|351051254|emb|CCD73459.1| Protein HERC-1 [Caenorhabditis elegans]
Length = 1019
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 22/188 (11%)
Query: 10 GEGRLGLGPGRGPNEAGGLSIPSKVKALP-----VPVAAVSCGGFFTMVLTEEGQLWNWG 64
GEG+LG+ + +P ++ P V +V+CG T+ LT++G++W+ G
Sbjct: 12 GEGQLGVRLSEST-----IQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVG 66
Query: 65 ANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL 123
+N + +LGRG R G + + +IIQI+ G H++++TDDG+VF+WG HGQL
Sbjct: 67 SNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQL 126
Query: 124 G--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLP 181
G FT Q P ++ + D + +A G + A+ E G++++WG D G
Sbjct: 127 GMESKFTW-QGTPRRVQEIND--IVQVASGSNHCIALDEGGRVFVWGEQAD------GRC 177
Query: 182 VVQPCPVE 189
+ +P PVE
Sbjct: 178 IHRPEPVE 185
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 21 GPNEAGGLSIPSKVKALPVP--------VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
G NE G L + SK P + V+ G + L E G+++ WG ++ G
Sbjct: 119 GSNEHGQLGMESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQAD---G 175
Query: 73 RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
R +P+ + L V I+++ G H LAL+ G VF+WG G+LG + Q
Sbjct: 176 RCIH----RPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQT 231
Query: 133 VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ + V ACG + + +T G+ + +G+ Q G
Sbjct: 232 SVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCG 275
>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
Length = 994
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 104/202 (51%), Gaps = 18/202 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALP-VPVAAVSCGGFFTMVLTEEG 58
ELYTWG +G +GL G G + G IP ++ AL +PVA VSCG + T ++T G
Sbjct: 226 ELYTWG--DGTHNVGL-LGHGTD--AGHWIPKRISGALDGLPVAYVSCGTWHTALITSMG 280
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
QL+ +G S LG G+ PK + +L ++ I +A G +H+ A+ +
Sbjct: 281 QLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSV 340
Query: 109 -DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
GK+F+WG G +LGH +++ P + +L D +ACG S + +T GK+
Sbjct: 341 SAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSM 400
Query: 168 GNAKDSQLGVPGLPVVQPCPVE 189
GN+ QLG P PC VE
Sbjct: 401 GNSVYGQLGNPNSDGRLPCLVE 422
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 91/177 (51%), Gaps = 20/177 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+TWG D + RLG G ++ L + V+CG T+ LT G++
Sbjct: 344 KLFTWG-DGDKHRLGHG-----DKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKV 397
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI-----IQIANGGYHSLALTDDGKVFSW 115
+ G + +LG + G LP LV+ RI +Q+A G YH LT +VF+W
Sbjct: 398 LSMGNSVYGQLGNPNSDGR-----LPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTW 452
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
G G +G+LGH +++KVP +EAL D V HIACG + +AA+ L+ W + D
Sbjct: 453 GKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAIC----LHKWVSGAD 505
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G +S P +V++L + AV+CG + T + E
Sbjct: 281 QLFTFG-DGSFGVLGHG------NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIV 333
Query: 57 --------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+L+ WG + LG GD+ KP + +L+D ++A G ++ LT
Sbjct: 334 THSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTT 393
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GKV S G +GQLG+ + + +V + +A E V +ACG A +T + +++ WG
Sbjct: 394 SGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWG 453
Query: 169 NAKDSQLG 176
+ +LG
Sbjct: 454 KGANGRLG 461
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 7/195 (3%)
Query: 1 ELYTWGR--DEGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEE 57
++Y WG E R+G E +P +++ L + V V CG ++T
Sbjct: 113 DVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRN 172
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG +S LG G R P+L+ +L + +A G +H+ A+T G++++WG
Sbjct: 173 GDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGD 232
Query: 118 GGH--GQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G H G LGH +P I D V +++CG +A +T G+L+ +G+
Sbjct: 233 GTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGV 292
Query: 175 LGVPGLPVVQPCPVE 189
LG L + CP E
Sbjct: 293 LGHGNLTSIS-CPKE 306
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D II +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIIHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAGS-DGQLGL-----MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKNS-HGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 19/196 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQHIIH--------VACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGVPGLPVVQ-PCPVE 189
LG+ + PC V+
Sbjct: 222 LGLSDEKDRESPCHVK 237
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
>gi|440789883|gb|ELR11174.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 360
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 93/186 (50%), Gaps = 16/186 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRG----PNEAGGLSIPSKVKAL-------PVPVAAVSCGGFF 50
+Y +G D +G+LGLG G P L +K + P + + CG
Sbjct: 109 VYAFG-DYADGKLGLGHTTGISYTPQIVSALLSEKIIKTIGSNDSVKPF-IVDLWCGRAV 166
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
T++L EG L+++G +S+ LGR D G +P L V+I A G H LA+T G
Sbjct: 167 TLLLDSEGTLYSFGVSSS--LGRADSRSG-RPLPLQFPAGVKIKSAAMGYNHGLAITTQG 223
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+V+SWG G HG+LGH Q+ P +I ALA T +ACG S +TE LY +G
Sbjct: 224 EVYSWGSGVHGRLGHGDEQDANAPRLISALASAKATQVACGPEHSLVLTEDNTLYTFGRV 283
Query: 171 KDSQLG 176
QLG
Sbjct: 284 LKGQLG 289
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 10/164 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LY++G GR GR L P+ VK + + + G + +T +G+++
Sbjct: 176 LYSFGVSSSLGRADSRSGRPLP----LQFPAGVK-----IKSAAMGYNHGLAITTQGEVY 226
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG+ + LG GD P+L+ L + Q+A G HSL LT+D ++++G G
Sbjct: 227 SWGSGVHGRLGHGDEQDANAPRLISALASAKATQVACGPEHSLVLTEDNTLYTFGRVLKG 286
Query: 122 QLGHSFTQNQKVPMVIEALADE-FVTHIACGGSTSAAVTEKGKL 164
QLG+ + VP V+E +A ++ I+ SA + E G++
Sbjct: 287 QLGYVEGAVESVPWVVEDVAGLGVISAISAAAGQSAVLFESGRV 330
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 26/132 (19%)
Query: 83 KLLPNLVDVRIIQIAN-----GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN-QKVPMV 136
+++ L I+ IA +H+LA+T G V+++G G+LG T P +
Sbjct: 75 RMISALASETIVHIATTPEKYDRHHTLAVTHSGAVYAFGDYADGKLGLGHTTGISYTPQI 134
Query: 137 IEALADE--------------FVTHIACGGSTSAAVTEKGKLYMWGNAK-----DSQLGV 177
+ AL E F+ + CG + + + +G LY +G + DS+ G
Sbjct: 135 VSALLSEKIIKTIGSNDSVKPFIVDLWCGRAVTLLLDSEGTLYSFGVSSSLGRADSRSGR 194
Query: 178 PGLPVVQPCPVE 189
P LP+ P V+
Sbjct: 195 P-LPLQFPAGVK 205
>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
guttata]
Length = 537
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 96/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL ++++S G G ++ TE+G+++ WG N +LG G
Sbjct: 61 GTGDNQST--IVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTT 118
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP- 134
G P ++ NL+ +++++A G +HS+AL+ DG +++WGY GQ+G T NQ P
Sbjct: 119 NQGITPVQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQPTPR 178
Query: 135 MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV G++Y WG + QLG+
Sbjct: 179 RVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGL 221
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+LY WG + G++G G N+ + + ++ V ++CG +M + G++
Sbjct: 154 DLYAWGYNNC-GQVG--SGSTANQPTPRRVSNCLQG--KIVVGIACGQTSSMAVVNNGEV 208
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG N N +LG G+ P + L V ++QIA G H+LALTD+G +++WG +
Sbjct: 209 YGWGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTY 268
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG NQ P+ I + V AC TSAA T+ G++YMWG + + P
Sbjct: 269 GQLGTGNKSNQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVTFPH 328
Query: 180 L 180
L
Sbjct: 329 L 329
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T +++ +G N + LG GD PK L L +I ++ G G H + T+DG
Sbjct: 41 IYITHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDG 100
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+V++WG+ G+ QLG+ T P+ V L + V +ACG S A++ G LY WG
Sbjct: 101 EVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGY 160
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 161 NNCGQVG-SGSTANQPTP 177
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
++ +T +VF +G LG Q+ VP +EAL + ++ ++ G G TE
Sbjct: 40 AIYITHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTED 99
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G++Y WG+ SQLG G+ VQ C
Sbjct: 100 GEVYAWGHNGYSQLGNGTTNQGITPVQVC 128
>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
Length = 531
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 96/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL ++++S G G ++ TE+G+++ WG N +LG G
Sbjct: 55 GTGDNQST--IVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP- 134
G P ++ NL+ +++++A G +HS+AL+ DG +++WGY GQ+G T NQ P
Sbjct: 113 NQGITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPR 172
Query: 135 MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV G++Y WG + QLG+
Sbjct: 173 RVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGL 215
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+LY WG + G++G G N+ + + ++ V ++CG +M + G++
Sbjct: 148 DLYAWGYNNC-GQVG--SGSTANQPTPRRVSNCLQG--KMVVGIACGQTSSMAVVSNGEV 202
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG N N +LG G+ P + L V I+QIA G H+LALTD+G +++WG +
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTY 262
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLG NQ P+ I + V AC TSAA T+ G++YMWG + + +P
Sbjct: 263 GQLGTGNKSNQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVILPH 322
Query: 180 L 180
L
Sbjct: 323 L 323
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T +++ +G N + LG GD PK L L +I ++ G G H + T+DG
Sbjct: 35 IYITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+V++WG+ G+ QLG+ T P+ V L + V +ACG S A++ G LY WG
Sbjct: 95 EVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
++ +T + +VF +G LG Q+ VP +EAL + ++ ++ G G TE
Sbjct: 34 AIYITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G++Y WG+ SQLG G+ VQ C
Sbjct: 94 GEVYAWGHNGYSQLGNGTTNQGITPVQVC 122
>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
Length = 958
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 300 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 359
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 360 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDI 419
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 420 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 449
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 382 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD 434
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 435 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 494
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 495 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 553
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 437 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 489
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 490 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 549
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 550 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 586
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 223 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 282
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 283 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 342
Query: 176 G 176
G
Sbjct: 343 G 343
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 4/162 (2%)
Query: 18 PGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR 76
PG N G ++ P + + + V+CGG ++ L E+G+++ G N+ +LG +R
Sbjct: 12 PGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH-ER 70
Query: 77 VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPM 135
G KP+ + L D II +A G HSLAL+D G++FSWG G GQLG T++ VP
Sbjct: 71 EGN-KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPR 129
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+I+ L + + ++CG A+ G+ + WG QLG+
Sbjct: 130 LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG E + P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLG-----KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGVN-TKGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 4/162 (2%)
Query: 18 PGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR 76
PG N G ++ P + + + V+CGG ++ L E+G+++ G N+ +LG +R
Sbjct: 12 PGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH-ER 70
Query: 77 VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPM 135
G KP+ + L D II +A G HSLAL+D G++FSWG G GQLG T++ VP
Sbjct: 71 EGN-KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPR 129
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+I+ L + + ++CG A+ G+ + WG QLG+
Sbjct: 130 LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG E + P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLG-----KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGVN-TKGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 4/162 (2%)
Query: 18 PGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR 76
PG N G ++ P + + + V+CGG ++ L E+G+++ G N+ +LG +R
Sbjct: 12 PGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH-ER 70
Query: 77 VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPM 135
G KP+ + L D II +A G HSLAL+D G++FSWG G GQLG T++ VP
Sbjct: 71 EGN-KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPR 129
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+I+ L + + ++CG A+ G+ + WG QLG+
Sbjct: 130 LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG E + P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLG-----KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGVN-TKGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
Length = 462
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 19/192 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG EG+LG+G + + +P+K+KAL + + VSCG + ++ L+E+G
Sbjct: 94 KVFAWGAGS-EGQLGIGEFKEIS-----FMPTKIKALAGIKIIQVSCGHYHSLALSEDGH 147
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 148 VFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSN 207
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G+ + P I AL + V +I+CG +A +TE+G+++ +G QL
Sbjct: 208 RSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 267
Query: 176 GVPGLPVVQPCP 187
QP P
Sbjct: 268 --------QPSP 271
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 91/155 (58%), Gaps = 3/155 (1%)
Query: 31 PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNL 88
P ++AL + V VSCG ++ + +G+++ WGA S +LG G+ + + P + L
Sbjct: 65 PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL 124
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
++IIQ++ G YHSLAL++DG VFSWG GQLG +++Q +P +++L +
Sbjct: 125 AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQ 184
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPV 182
+A GG+ S A++ G + WG+ + QL + G V
Sbjct: 185 VAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKV 219
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 94/174 (54%), Gaps = 12/174 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++WGR+ EG+LGLG + +IP KVK+L +P+A V+ GG + L+ G
Sbjct: 147 HVFSWGRNS-EGQLGLG-----KNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGT 200
Query: 60 LWNWGANSNYELG-RGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+N + +L G++V +KP + L ++ +I I+ G H+ LT++G+VF++G
Sbjct: 201 SFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFG 260
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGN 169
GQL S Q+ P +IE + V+ I C T A V G++ G
Sbjct: 261 GNSSGQLQPSPRSGQRGPQLIEGIGGR-VSQIECASYHTIAYVYTTGQVVSLGR 313
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 3/166 (1%)
Query: 25 AGGLSIPSKVKA--LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP 82
A G P ++KA + + + G +++L ++++ G NS +LG+ +P
Sbjct: 6 AAGSRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERP 65
Query: 83 KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALA 141
+ + L D+ + ++ G HS+A+ GKVF+WG G GQLG F + +P I+ALA
Sbjct: 66 EPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALA 125
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
+ ++CG S A++E G ++ WG + QLG+ Q P
Sbjct: 126 GIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIP 171
>gi|351707650|gb|EHB10569.1| X-linked retinitis pigmentosa GTPase regulator [Heterocephalus
glaber]
Length = 1209
Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 106/179 (59%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL N + +P +V + P++ V+CG + + +T +G+L+
Sbjct: 170 LFVWG-DNSEGQIGL------NNIINVCVPHQVN-IGKPISWVACGYYHSAFVTMDGELY 221
Query: 62 NWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G + + +LG + P+L+ + + ++IQ+A GG H++ LT+ V+++G G
Sbjct: 222 TFGESESGKLGLPKELLINHRTPQLVAGIPE-KVIQVACGGGHTVVLTEKA-VYAFGLGQ 279
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P VIE + D+ +T+I+CG + +A +T+KG +Y +G+ + +LG+
Sbjct: 280 FGQLGLGTFLFETSEPKVIEQIKDQKITYISCGENHTALITDKGLVYTFGDGRHGKLGL 338
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/156 (35%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYT+G E G+LGL N P V +P V V+CGG T+VLTE+ +
Sbjct: 219 ELYTFGESE-SGKLGLPKELLINH----RTPQLVAGIPEKVIQVACGGGHTVVLTEKA-V 272
Query: 61 WNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G +LG G + +PK++ + D +I I+ G H+ +TD G V+++G G
Sbjct: 273 YAFGLGQFGQLGLGTFLFETSEPKVIEQIKDQKITYISCGENHTALITDKGLVYTFGDGR 332
Query: 120 HGQLG---HSFTQNQKVPMVIEALADEFVTHIACGG 152
HG+LG +FT NQ P+V V +ACGG
Sbjct: 333 HGKLGLGVENFT-NQFFPIVCSEFLRFTVQLVACGG 367
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 49/216 (22%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG N+ P+ VKAL P V +CG T+VLT EG
Sbjct: 30 KLYMFGSNNW-GQLGLGSKSTVNK------PTCVKALKPEKVQLAACGRNHTLVLTVEGS 82
Query: 60 LWNWGANSNYELGRGD---RVGGWKPKLLPNLVDVRIIQIANGGYHSLALT--------- 107
++ G N+ +LG GD R + + +++ Q++ G S AL+
Sbjct: 83 VYAAGGNNEGQLGLGDTEERNTFHRISFFTSQHNIK--QLSAGSNTSAALSATWFHATKM 140
Query: 108 -------------------------DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD 142
+DG++F WG GQ+G + N VP +
Sbjct: 141 QRTLDHQTTVLELIKFSAFKEFLPREDGRLFVWGDNSEGQIGLNNIINVCVPHQVNI--G 198
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+ ++ +ACG SA VT G+LY +G ++ +LG+P
Sbjct: 199 KPISWVACGYYHSAFVTMDGELYTFGESESGKLGLP 234
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 35/169 (20%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
+SCG + V+T +L+ +G+N+ +LG G + KP + L ++ A G H+
Sbjct: 15 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVQLAACGRNHT 74
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVT--- 159
L LT +G V++ G GQLG T+ + I + + ++ G +TSAA++
Sbjct: 75 LVLTVEGSVYAAGGNNEGQLGLGDTEERNTFHRISFFTSQHNIKQLSAGSNTSAALSATW 134
Query: 160 -------------------------------EKGKLYMWGNAKDSQLGV 177
E G+L++WG+ + Q+G+
Sbjct: 135 FHATKMQRTLDHQTTVLELIKFSAFKEFLPREDGRLFVWGDNSEGQIGL 183
>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
Length = 882
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 13/173 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+TWG D + RLG G ++ L + V+CG T+ LT G++
Sbjct: 267 KLFTWG-DGDKHRLGHG-----DKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKV 320
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
W G + +LG + G +P L+ + + ++QIA G YH LT +VF+WG G
Sbjct: 321 WTMGNSVYGQLGNLNSDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGA 378
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+G+LGH +++KVP +EAL D V HIACG + +AA+ L+ W + D
Sbjct: 379 NGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAIC----LHKWVSGAD 427
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 22/191 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
E++TWG D G GRLG G P V++L + V+CG F T +T G+
Sbjct: 97 EVFTWGEDSG-GRLGHGTREDSVH------PRLVESLAACNIDFVACGEFHTCAVTTTGE 149
Query: 60 LWNWGANSNYE--LGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L+ WG ++ LG G VG W P+ + L ++I ++ G +H+ +T G++F++G
Sbjct: 150 LYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFG 209
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE-----------KGKLY 165
G G LGH ++ P +E+L+ +ACG +AA+ E GKL+
Sbjct: 210 DGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLF 269
Query: 166 MWGNAKDSQLG 176
WG+ +LG
Sbjct: 270 TWGDGDKHRLG 280
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 20/188 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + +S P +V++L + AV+CG + T + E
Sbjct: 204 QLFTFG-DGSFGVLGHG------DLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIV 256
Query: 57 --------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+L+ WG + LG GD+ KP + +L+D ++A G ++ LT
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTT 316
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GKV++ G +GQLG + + + +V + +A E V IACG A +T + +++ WG
Sbjct: 317 SGKVWTMGNSVYGQLG-NLNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWG 375
Query: 169 NAKDSQLG 176
+ +LG
Sbjct: 376 KGANGRLG 383
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP---VAAVSCGGFFTMVLTEE 57
ELYTWG +G +GL G G + G IP ++ P+ +A VSCG + T ++T
Sbjct: 149 ELYTWG--DGTHNVGL-LGHGTDV--GHWIPRRISG-PLEGLQIAYVSCGTWHTALITSM 202
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G S LG GD P+ + +L ++ I +A G +H+ A+ +
Sbjct: 203 GQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSAT 262
Query: 109 --DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
GK+F+WG G +LGH + + P + +L D +ACG S + +T GK++
Sbjct: 263 VSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWT 322
Query: 167 WGNAKDSQLGVPGLPVVQPCPVE 189
GN+ QLG +PC VE
Sbjct: 323 MGNSVYGQLGNLNSD-GRPCLVE 344
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 37 LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQI 96
L + V V CG ++T G+++ WG +S LG G R P+L+ +L I +
Sbjct: 75 LVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFV 134
Query: 97 ANGGYHSLALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGS 153
A G +H+ A+T G++++WG G H G LGH +P I L + +++CG
Sbjct: 135 ACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTW 194
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
+A +T G+L+ +G+ LG L + CP E
Sbjct: 195 HTALITSMGQLFTFGDGSFGVLGHGDLKSIS-CPRE 229
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L + + + + + G H+ +T +G+VF+WG G+LGH ++ P ++E+LA
Sbjct: 68 PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ +ACG + AVT G+LY WG+
Sbjct: 128 ACNIDFVACGEFHTCAVTTTGELYTWGD 155
>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Monodelphis domestica]
Length = 1170
Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 15/180 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL E + +PS+V + P++ +SCG + + +T EG+L+
Sbjct: 161 LFMWG-DNSEGQIGLA------EEANVCVPSEV-TIGKPISWISCGYYHSAFVTTEGELY 212
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLV---DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+G N +LG K +P LV ++ Q+A GG H++ALT++ +V+++G G
Sbjct: 213 TFGEPENGKLGLSPE--QLKNHRIPQLVLGIPGKVNQVACGGGHTVALTEE-EVYTFGLG 269
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P V++ L ++ + +IACG + +A +++ G +Y +G+ + +LG+
Sbjct: 270 QFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDGRHGKLGL 329
Score = 86.3 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 11/179 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG N+ P+ VKAL P V +CG T+V TEEG+
Sbjct: 55 KLYMFGSNNW-GQLGLGSKTTVNK------PTCVKALKPEKVKIAACGRNHTLVYTEEGK 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G NS +LG GD +L+ +I Q++ G S ALT+DG +F WG
Sbjct: 108 VYAAGGNSEGQLGLGDTEERTTFQLVSFFTAQHKIKQLSAGSNTSAALTEDGVLFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G + N VP E + ++ I+CG SA VT +G+LY +G ++ +LG+
Sbjct: 168 SEGQIGLAEEANVCVPS--EVTIGKPISWISCGYYHSAFVTTEGELYTFGEPENGKLGL 224
Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 57/156 (36%), Positives = 86/156 (55%), Gaps = 11/156 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYT+G E G+LGL P + N IP V +P V V+CGG T+ LTEE ++
Sbjct: 210 ELYTFGEPE-NGKLGLSPEQLKNH----RIPQLVLGIPGKVNQVACGGGHTVALTEE-EV 263
Query: 61 WNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G +LG G + +PK++ +L + +I IA G H+ ++D G ++++G G
Sbjct: 264 YTFGLGQFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDGR 323
Query: 120 HGQLG---HSFTQNQKVPMVIEALADEFVTHIACGG 152
HG+LG +FT NQ VP + V +ACGG
Sbjct: 324 HGKLGLGQENFT-NQFVPTLCSNFLKFIVRLVACGG 358
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+IPSK A +SCG T ++T +L+ +G+N+ +LG G + KP + L
Sbjct: 25 NIPSKFWLKNDIPAYLSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKAL 84
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL-ADEFVTH 147
++ A G H+L T++GKV++ G GQLG T+ + ++ A +
Sbjct: 85 KPEKVKIAACGRNHTLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFTAQHKIKQ 144
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
++ G +TSAA+TE G L+MWG+ + Q+G+
Sbjct: 145 LSAGSNTSAALTEDGVLFMWGDNSEGQIGL 174
>gi|326490515|dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 19/194 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LGLG G +S P KV L V V + G ++V+TE+G+
Sbjct: 139 ELFVWGKNS-SGQLGLGKSAGKV----VSTPRKVDYLADVRVKMTALGSEHSIVVTEDGE 193
Query: 60 LWNWGANSNYELGRGDRVG---------GWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+WGA LG G + + P+L+ NL ++I +IA G HS + + G
Sbjct: 194 ALSWGAAGGGRLGHGHKSSFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLHSACIDEKG 253
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF +G LG S + P V+E + +F +ACGG + AVT++G LY WG+
Sbjct: 254 TVFIFGQKTEKVLGRS--NDAPRPSVVEEI--QFSEEVACGGYHTCAVTDRGDLYSWGSN 309
Query: 171 KDSQLGVPGLPVVQ 184
++ LG+ G +V+
Sbjct: 310 ENGCLGLGGTGMVR 323
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGG--WKPKLLPNL 88
P +V V +S G + +T +G+L+ WG NS+ +LG G G P+ + L
Sbjct: 111 PVEVSGFHEKVVQISAGNHHSCAVTADGELFVWGKNSSGQLGLGKSAGKVVSTPRKVDYL 170
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH---------SFTQNQKVPMVIEA 139
DVR+ A G HS+ +T+DG+ SWG G G+LGH + T N+ P +I+
Sbjct: 171 ADVRVKMTALGSEHSIVVTEDGEALSWGAAGGGRLGHGHKSSFLGFAMTSNEYTPRLIKN 230
Query: 140 LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
L + IA G SA + EKG ++++G + LG
Sbjct: 231 LDGIKIKRIAAGMLHSACIDEKGTVFIFGQKTEKVLG 267
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 87/174 (50%), Gaps = 5/174 (2%)
Query: 5 WGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWG 64
WG + GRLGLG + + P + P A++SCGG T+ LTE G+++ G
Sbjct: 36 WGNGD-HGRLGLGALE--SRWSPTACPFFLARPADPPASLSCGGAHTLFLTEGGRVFATG 92
Query: 65 ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
N +LG G + + + +++QI+ G +HS A+T DG++F WG GQLG
Sbjct: 93 LNDFGQLGIGSSMPHTLDPVEVSGFHEKVVQISAGNHHSCAVTADGELFVWGKNSSGQLG 152
Query: 125 HSFTQNQKV--PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ + V P ++ LAD V A G S VTE G+ WG A +LG
Sbjct: 153 LGKSAGKVVSTPRKVDYLADVRVKMTALGSEHSIVVTEDGEALSWGAAGGGRLG 206
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQI----ANG 99
V+CGG+ T +T+ G L++WG+N N LG +GG P +V + ++ +
Sbjct: 287 VACGGYHTCAVTDRGDLYSWGSNENGCLG----LGGTGMVRFPEVVSSSLFKLPVSKVSC 342
Query: 100 GYHSLALTDDGKVFSWGYGGH------------GQLGHSFTQNQKVPMVIEALADEFVTH 147
G+ A+ +++WG+GG GQLGH + PM++E + H
Sbjct: 343 GWKHTAVISGEDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYCEPMMVELHKNARAVH 402
Query: 148 IACGGSTSAAVTE 160
++CG + + A+ E
Sbjct: 403 VSCGFNHTGAILE 415
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRI---IQIANGGYHSLALTDDGKVFSWGYGG 119
WG + LG G W P P + ++ GG H+L LT+ G+VF+ G
Sbjct: 36 WGNGDHGRLGLGALESRWSPTACPFFLARPADPPASLSCGGAHTLFLTEGGRVFATGLND 95
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + + V + E V I+ G S AVT G+L++WG QLG+
Sbjct: 96 FGQLGIGSSMPHTLDPVEVSGFHEKVVQISAGNHHSCAVTADGELFVWGKNSSGQLGL 153
>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
Group]
Length = 917
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 104/202 (51%), Gaps = 18/202 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALP-VPVAAVSCGGFFTMVLTEEG 58
ELYTWG +G +GL G G + G IP ++ AL +PVA VSCG + T ++T G
Sbjct: 149 ELYTWG--DGTHNVGL-LGHGTD--AGHWIPKRISGALDGLPVAYVSCGTWHTALITSMG 203
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
QL+ +G S LG G+ PK + +L ++ I +A G +H+ A+ +
Sbjct: 204 QLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSV 263
Query: 109 -DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
GK+F+WG G +LGH +++ P + +L D +ACG S + +T GK+
Sbjct: 264 SAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSM 323
Query: 168 GNAKDSQLGVPGLPVVQPCPVE 189
GN+ QLG P PC VE
Sbjct: 324 GNSVYGQLGNPNSDGRLPCLVE 345
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 93/178 (52%), Gaps = 22/178 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+TWG D + RLG G ++ L + V+CG T+ LT G++
Sbjct: 267 KLFTWG-DGDKHRLGHG-----DKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKV 320
Query: 61 WNWGANSNY-ELGRGDRVGGWKPKLLPNLVDVRI-----IQIANGGYHSLALTDDGKVFS 114
+ G NS Y +LG + G LP LV+ RI +Q+A G YH LT +VF+
Sbjct: 321 LSMG-NSVYGQLGNPNSDG-----RLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFT 374
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
WG G +G+LGH +++KVP +EAL D V HIACG + +AA+ L+ W + D
Sbjct: 375 WGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAIC----LHKWVSGAD 428
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G +S P +V++L + AV+CG + T + E
Sbjct: 204 QLFTFG-DGSFGVLGHG------NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIV 256
Query: 57 --------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+L+ WG + LG GD+ KP + +L+D ++A G ++ LT
Sbjct: 257 THSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTT 316
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GKV S G +GQLG+ + + +V + +A E V +ACG A +T + +++ WG
Sbjct: 317 SGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWG 376
Query: 169 NAKDSQLG 176
+ +LG
Sbjct: 377 KGANGRLG 384
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 7/195 (3%)
Query: 1 ELYTWGR--DEGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEE 57
++Y WG E R+G E +P +++ L + V V CG ++T
Sbjct: 36 DVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRN 95
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG +S LG G R P+L+ +L + +A G +H+ A+T G++++WG
Sbjct: 96 GDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGD 155
Query: 118 GGH--GQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G H G LGH +P I D V +++CG +A +T G+L+ +G+
Sbjct: 156 GTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGV 215
Query: 175 LGVPGLPVVQPCPVE 189
LG L + CP E
Sbjct: 216 LGHGNLTSIS-CPKE 229
>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
Length = 907
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 93/174 (53%), Gaps = 15/174 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+TWG D + RLG G ++ L + V+CG T+ LT G++
Sbjct: 267 KLFTWG-DGDKHRLGHG-----DKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKV 320
Query: 61 WNWGANSNY-ELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
W G NS Y +LG + G +P L+ + + ++QIA G YH LT +VF+WG G
Sbjct: 321 WTMG-NSVYGQLGNLNSDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKG 377
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+G+LGH +++KVP +EAL D V HIACG + +AA+ L+ W + D
Sbjct: 378 ANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAIC----LHKWVSGAD 427
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 22/191 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
E++TWG D G GRLG G P V++L + V+CG F T +T G+
Sbjct: 97 EVFTWGEDSG-GRLGHGTREDSVH------PRLVESLAACNIDFVACGEFHTCAVTTTGE 149
Query: 60 LWNWGANSNYE--LGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L+ WG ++ LG G VG W P+ + L ++I ++ G +H+ +T G++F++G
Sbjct: 150 LYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFG 209
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE-----------KGKLY 165
G G LGH ++ P +E+L+ +ACG +AA+ E GKL+
Sbjct: 210 DGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLF 269
Query: 166 MWGNAKDSQLG 176
WG+ +LG
Sbjct: 270 TWGDGDKHRLG 280
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 20/188 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + +S P +V++L + AV+CG + T + E
Sbjct: 204 QLFTFG-DGSFGVLGHG------DLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIV 256
Query: 57 --------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+L+ WG + LG GD+ KP + +L+D ++A G ++ LT
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTT 316
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GKV++ G +GQLG + + + +V + +A E V IACG A +T + +++ WG
Sbjct: 317 SGKVWTMGNSVYGQLG-NLNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWG 375
Query: 169 NAKDSQLG 176
+ +LG
Sbjct: 376 KGANGRLG 383
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP---VAAVSCGGFFTMVLTEE 57
ELYTWG +G +GL G G + G IP ++ P+ +A VSCG + T ++T
Sbjct: 149 ELYTWG--DGTHNVGL-LGHGTDV--GHWIPRRISG-PLEGLQIAYVSCGTWHTALITSM 202
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G S LG GD P+ + +L ++ I +A G +H+ A+ +
Sbjct: 203 GQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSAT 262
Query: 109 --DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
GK+F+WG G +LGH + + P + +L D +ACG S + +T GK++
Sbjct: 263 VSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWT 322
Query: 167 WGNAKDSQLGVPGLPVVQPCPVE 189
GN+ QLG +PC VE
Sbjct: 323 MGNSVYGQLGNLNSD-GRPCLVE 344
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 37 LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQI 96
L + V V CG ++T G+++ WG +S LG G R P+L+ +L I +
Sbjct: 75 LVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFV 134
Query: 97 ANGGYHSLALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGS 153
A G +H+ A+T G++++WG G H G LGH +P I L + +++CG
Sbjct: 135 ACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTW 194
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
+A +T G+L+ +G+ LG L + CP E
Sbjct: 195 HTALITSMGQLFTFGDGSFGVLGHGDLKSIS-CPRE 229
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L + + + + + G H+ +T +G+VF+WG G+LGH ++ P ++E+LA
Sbjct: 68 PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ +ACG + AVT G+LY WG+
Sbjct: 128 ACNIDFVACGEFHTCAVTTTGELYTWGD 155
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 58/178 (32%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++ +WGR E G+LG S PS + L V V+CG F+ L E GQ
Sbjct: 129 KIRSWGRGE-SGQLGHA------SFSHSSTPSIIDELASQRVKEVACGVAFSAALMEGGQ 181
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG N +LG+GDR P++LP++ + +A G H + LT V++WG
Sbjct: 182 LYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNS 241
Query: 120 HGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH F + + P + ++ + I G + S +T G +Y WG QLG
Sbjct: 242 YGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLG 299
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 58/105 (55%)
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
GR +P+ + +L + I I G H LAL GK+ SWG G GQLGH+ +
Sbjct: 90 GRFSTYNSQRPQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHS 149
Query: 132 KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
P +I+ LA + V +ACG + SAA+ E G+LY WG + QLG
Sbjct: 150 STPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLG 194
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LYTWG + G+LG G + +IP + ++ V ++CG +VLT
Sbjct: 181 QLYTWGCNR-YGQLGQG------DRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRD 233
Query: 60 LWNWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG NS +LG G R +PK + + + I QI G HS +T G +++WG G
Sbjct: 234 VYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGRG 293
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLGH +++ +P ++ L + + I G A+T G +Y WG QLG
Sbjct: 294 DFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLG 352
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 31 PSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P +V +L + + ++CG + L G++ +WG + +LG P ++ L
Sbjct: 100 PQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSIIDELA 159
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
R+ ++A G S AL + G++++WG +GQLG + +P ++ ++ V +A
Sbjct: 160 SQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMA 219
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLG 176
CG + +T +Y WGN QLG
Sbjct: 220 CGAAHIVVLTTSRDVYTWGNNSYGQLG 246
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++YTWG + G+LG G + L P V+ + + + + G + V+T G
Sbjct: 233 DVYTWG-NNSYGQLG----HGFRKKHCLQ-PKSVRVMSGLDIKQIVAGENHSCVMTSFGD 286
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNL-VDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG +LG GD P LL L + I +G +A+T G V+SWG
Sbjct: 287 IYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRN 346
Query: 119 GHGQLGHS----------FTQNQKVPMVIE--ALADEF----VTHIACGGSTSAAVTE-K 161
GQLGH F + P +I A ++E ++ I+CG A+TE K
Sbjct: 347 CFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKK 406
Query: 162 GKLYMWGNAKDSQLGV-PGLPVVQPCPVE 189
L+ WG + QLG+ P +P P E
Sbjct: 407 DTLFAWGRGEHGQLGLDPRDTSFRPIPQE 435
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 26/163 (15%)
Query: 2 LYTWGRDEGEGRLGLG-------PGRGPNEAGGLSIPSKVKAL----PVPVAAVSCGGFF 50
+Y+WGR+ G+LG G R P++ I S A + ++++SCG
Sbjct: 340 VYSWGRN-CFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHH 398
Query: 51 TMVLTEEGQ-LWNWGANSNYELGRGDRVGGWKP--KLLPNLVDVRIIQIANGGYHSLALT 107
+ +TE+ L+ WG + +LG R ++P + + + + ++ A HS+ +
Sbjct: 399 VLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVA 458
Query: 108 D--------DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD 142
D KVFSWG G GQLG+ + KVP++ E + D
Sbjct: 459 TMPGSGPKGDMKVFSWGRGSFGQLGYG---SGKVPVMKETVQD 498
>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
Length = 1187
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 379 TLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIESL 438
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
++ IA GG HS +T G++F+WG G +G+LGH +++Q P ++EAL V +
Sbjct: 439 RGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVIDV 498
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 499 ACGSGDAQTLCITDDDSVWSWGDGDYGKLG 528
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
EL+TWG+ GRLG G + P V+AL V V V+CG T+ +T++
Sbjct: 461 ELFTWGKGR-YGRLGHGDSEDQMK------PKLVEALKGVRVIDVACGSGDAQTLCITDD 513
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P+ + L+ ++++ G S+ALT G V++WG
Sbjct: 514 DSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVECGSQFSVALTKSGCVYTWGK 573
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P + AL + V IA G A T++G+++ WG+ + QLG
Sbjct: 574 GDYHRLGHGSDDHVRRPRKVAALQGKNVISIATGSLHCVACTDQGEVFTWGDNDEGQLG 632
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G IP KV+AL V V CG F++ LT+ G +
Sbjct: 516 VWSWG-DGDYGKLGRGG------SDGCKIPQKVEALIGQGVVKVECGSQFSVALTKSGCV 568
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L +I IA G H +A TD G+VF+WG
Sbjct: 569 YTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVISIATGSLHCVACTDQGEVFTWGDNDE 628
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T P ++ AL + + +ACG + S A
Sbjct: 629 GQLGDGSTSAIPRPRLVAALQGKKINRVACGSAHSLA 665
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 48/167 (28%)
Query: 58 GQLWNWGANSNYELG--RGDRV------------------GGWK---------------- 81
GQ+W WG N +LG G +V GG +
Sbjct: 308 GQIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPVQLIGGEQTLFAVYATGYGAGGRL 367
Query: 82 ----------PKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ 129
P LL ++ V I ++A +GG H LAL+ +G+VFSWG G+LGH
Sbjct: 368 GIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRN 427
Query: 130 NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ P VIE+L + V IA GG+ SA +T G+L+ WG + +LG
Sbjct: 428 SCDRPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLG 474
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTE-EGQ 59
L TWGR E +G+LG G +A +P+ + P + +V CG T +E E Q
Sbjct: 35 LCTWGRGE-DGQLGHG------DAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQ 87
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG LG G+ + P+ + L ++I Q+A G H LA+T G+V SWG
Sbjct: 88 VYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQ 147
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG T++ +P I+A V IA G +AAVTE G +Y WG + LG+
Sbjct: 148 NGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGL 205
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 96/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG +P ++A + V ++ G T +TE+G
Sbjct: 139 EVLSWGRNQ-NGQLGLGTTEDS------LLPQTIQAFEGISVKMIAAGAEHTAAVTEDGD 191
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG LG GDR + P+ + ++ +++ +A G H++ ++ G ++++G+
Sbjct: 192 IYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSK 251
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLGH ++ VP +EAL D + I+ G + A+T GKLY WG K Q+G
Sbjct: 252 YGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGA 309
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GRLG G + + P VKAL + + ++CG + +T G+
Sbjct: 87 QVYSWGWGD-FGRLGHG------NSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGE 139
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G P+ + + + IA G H+ A+T+DG ++ WG+G
Sbjct: 140 VLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGR 199
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + ++ + + +ACG + V+ G LY +G +K QLG
Sbjct: 200 YGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLG 256
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P V VS G ++ L L WG + +LG GD P ++ I +
Sbjct: 13 PPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVI 72
Query: 98 NGGYHSLALT-DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
G H+ A + D+ +V+SWG+G G+LGH + + P ++AL + +ACG S
Sbjct: 73 CGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCL 132
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
AVT G++ WG ++ QLG+
Sbjct: 133 AVTMAGEVLSWGRNQNGQLGL 153
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 5 WGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNW 63
WGR G LGLG + +P KV ++ + V+CG T+ ++ G L+ +
Sbjct: 197 WGR---YGNLGLG------DRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTY 247
Query: 64 GANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL 123
G + +LG GD P + L D QI+ G H++ALT DGK++ WG+ GQ+
Sbjct: 248 GWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQV 307
Query: 124 GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
G + P + ++ V +ACG + A T
Sbjct: 308 GAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFT 343
>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
Length = 907
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 93/174 (53%), Gaps = 15/174 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+TWG D + RLG G ++ L + V+CG T+ LT G++
Sbjct: 267 KLFTWG-DGDKHRLGHG-----DKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKV 320
Query: 61 WNWGANSNY-ELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
W G NS Y +LG + G +P L+ + + ++QIA G YH LT +VF+WG G
Sbjct: 321 WTMG-NSVYGQLGNLNSDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKG 377
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+G+LGH +++KVP +EAL D V HIACG + +AA+ L+ W + D
Sbjct: 378 ANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAIC----LHKWVSGAD 427
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 22/191 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
E++TWG D G GRLG G P V++L + V+CG F T +T G+
Sbjct: 97 EVFTWGEDSG-GRLGHGTREDSVH------PRLVESLAACNIDFVACGEFHTCAVTTTGE 149
Query: 60 LWNWGANSNYE--LGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L+ WG ++ LG G VG W P+ + L ++I ++ G +H+ +T G++F++G
Sbjct: 150 LYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFG 209
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE-----------KGKLY 165
G G LGH ++ P +E+L+ +ACG +AA+ E GKL+
Sbjct: 210 DGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLF 269
Query: 166 MWGNAKDSQLG 176
WG+ +LG
Sbjct: 270 TWGDGDKHRLG 280
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 20/188 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + +S P +V++L + AV+CG + T + E
Sbjct: 204 QLFTFG-DGSFGVLGHG------DLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIV 256
Query: 57 --------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+L+ WG + LG GD+ KP + +L+D ++A G ++ LT
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTT 316
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GKV++ G +GQLG + + + +V + +A E V IACG A +T + +++ WG
Sbjct: 317 SGKVWTMGNSVYGQLG-NLNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWG 375
Query: 169 NAKDSQLG 176
+ +LG
Sbjct: 376 KGANGRLG 383
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP---VAAVSCGGFFTMVLTEE 57
ELYTWG +G +GL G G + G IP ++ P+ +A VSCG + T ++T
Sbjct: 149 ELYTWG--DGTHNVGL-LGHGTDV--GHWIPRRISG-PLEGLQIAYVSCGTWHTALITSM 202
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G S LG GD P+ + +L ++ I +A G +H+ A+ +
Sbjct: 203 GQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSAT 262
Query: 109 --DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
GK+F+WG G +LGH + + P + +L D +ACG S + +T GK++
Sbjct: 263 VSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWT 322
Query: 167 WGNAKDSQLGVPGLPVVQPCPVE 189
GN+ QLG +PC VE
Sbjct: 323 MGNSVYGQLGNLNSD-GRPCLVE 344
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 37 LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQI 96
L + V V CG ++T G+++ WG +S LG G R P+L+ +L I +
Sbjct: 75 LVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFV 134
Query: 97 ANGGYHSLALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGS 153
A G +H+ A+T G++++WG G H G LGH +P I L + +++CG
Sbjct: 135 ACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTW 194
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
+A +T G+L+ +G+ LG L + CP E
Sbjct: 195 HTALITSMGQLFTFGDGSFGVLGHGDLKSIS-CPRE 229
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L + + + + + G H+ +T +G+VF+WG G+LGH ++ P ++E+LA
Sbjct: 68 PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ +ACG + AVT G+LY WG+
Sbjct: 128 ACNIDFVACGEFHTCAVTTTGELYTWGD 155
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELY+WG + +G+LGLG R E P+ +K+L +P+A ++CG + L++ G
Sbjct: 155 ELYSWGGNY-DGQLGLG-MRSEYEKQ----PTLIKSLLGIPIAFIACGSNHSFALSKSGA 208
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P L L +R+ IA G S L+ DG VF+ G G
Sbjct: 209 IYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGM 268
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMW 167
+GQLGH T N+ +P I L VT ++CG T A V +G++Y +
Sbjct: 269 YGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 88/149 (59%), Gaps = 3/149 (2%)
Query: 31 PSKVKALPV-PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P KV+ L + +SCGG T+ E GQL+ WG++S+ +LG PK++ +L
Sbjct: 75 PEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLGFNGTTQPL-PKIIKSLA 133
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTHI 148
I+QI+ G HSLALT++G+++SWG GQLG ++ +K P +I++L + I
Sbjct: 134 TFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFI 193
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
ACG + S A+++ G +Y WG QLG+
Sbjct: 194 ACGSNHSFALSKSGAIYGWGKNTYGQLGL 222
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 93/176 (52%), Gaps = 7/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG G LGLG G + V+ V+ G T++LT+ G+++
Sbjct: 1 MYCWG-STVHGELGLG---GIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVF 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+ G N +LG + KP+ + L RI +I+ GG H+LA + G++F WG HG
Sbjct: 57 SCGNNDLDQLGHKKQRT--KPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHG 114
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG + T Q +P +I++LA + I+CG + S A+T G+LY WG D QLG+
Sbjct: 115 QLGFNGT-TQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGL 169
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 60 LWNWGANSNYELGRG----DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
++ WG+ + ELG G D++ + P + Q+ G H++ LT G+VFS
Sbjct: 1 MYCWGSTVHGELGLGGIEHDQI--FAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSC 58
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G QLGH + + P +E L +T I+CGG+ + A E G+L+ WG+ QL
Sbjct: 59 GNNDLDQLGHK--KQRTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQL 116
Query: 176 GVPGLPVVQPCP 187
G G QP P
Sbjct: 117 GFNG--TTQPLP 126
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 26/173 (15%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+Y WG++ G+LGL +E L P+++K L + V ++CG F+ L+ +G +
Sbjct: 209 IYGWGKN-TYGQLGLN-----DEENKLH-PTQLKTLRSIRVKYIACGEDFSAFLSADGGV 261
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ GA +LG G P+ + L+ + Q++ G H+LAL G+V+S+G GG
Sbjct: 262 FTCGAGMYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPSRGRVYSFGLGG 321
Query: 120 HGQLGHSFTQNQKVPMV----------IEALADE-------FVTHIACGGSTS 155
GQLG N P V + + D+ VTHI GG+ S
Sbjct: 322 GGQLGTRVKTNCSTPQVVLGPWVSPSGVPVITDKKKTSENVLVTHIFSGGNQS 374
>gi|332261829|ref|XP_003279969.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Nomascus leucogenys]
Length = 704
Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 109/179 (60%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG++ EG++GL PN + +P +V + PV+ +SCG + + +T +G+L+
Sbjct: 161 LFMWGKNS-EGQIGLK--NVPN----VCVPQQV-TIGKPVSWISCGYYHSAFVTTDGELY 212
Query: 62 NWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G N +LG ++ G P+L+ + + ++IQ+A GG H++ LT++ V+++G G
Sbjct: 213 VFGEPENGKLGLPSQLLGNHRTPQLVSEIPE-KVIQVARGGEHTVVLTENA-VYTFGLGQ 270
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P VIE + D+ +++I+CG + +A + + G +Y +GN++ +LG+
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIRDIGLMYTFGNSRHGKLGL 329
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG +V TE G
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSAVSKPTCVKALKPEKVKLAACGRNHILVSTEGGN 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD ++ + +I Q++ G S A+T+DG++F WG
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAVTEDGRLFMWGKN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + V+ I+CG SA VT G+LY++G ++ +LG+P
Sbjct: 168 SEGQIGLKNVPNVCVPQ--QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLP 225
Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 2/146 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VPV +SCG + V+T +L+ +G+N+ +LG G + KP + L ++ A
Sbjct: 36 VPVH-LSCGDEHSAVVTRNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAAC 94
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAA 157
G H L T+ G V++ G GQLG T+ + VI E + ++ G +TSAA
Sbjct: 95 GRNHILVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 158 VTEKGKLYMWGNAKDSQLGVPGLPVV 183
VTE G+L+MWG + Q+G+ +P V
Sbjct: 155 VTEDGRLFMWGKNSEGQIGLKNVPNV 180
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 97/177 (54%), Gaps = 9/177 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + GRLG G + L IP ++AL + + ++CG + +T EG+
Sbjct: 88 EVYSWGWGD-FGRLGHG------NSSDLFIPQPIRALQGLRIKQIACGDSHCLAVTMEGE 140
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G P+ + V I +A G HS+A+T++G+++ WG+G
Sbjct: 141 VQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGR 200
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ +P + D+ V +ACG + +V+ G+LY +G +K QLG
Sbjct: 201 YGNLGLGDRNDRCIPEKVSVDCDKMVL-VACGWRHTISVSSSGELYTYGWSKYGQLG 256
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELY WG G LGLG + IP KV + V+CG T+ ++ G+L
Sbjct: 192 ELYGWGWGR-YGNLGLG------DRNDRCIPEKVSVDCDKMVLVACGWRHTISVSSSGEL 244
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ +G + +LG GD P L D I Q++ G H++ALT G+++ WG+
Sbjct: 245 YTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKF 304
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G ++ P+ ++ D+ V I+CG + AVTEK +Y WG + QLG+
Sbjct: 305 GQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGI 361
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEG-QLW 61
+WGR E +G+LG G + +P+++ AL + +V CG T+ +E +++
Sbjct: 38 SWGRGE-DGQLGHG------DTDDRLLPTQLSALDAQQIVSVVCGADHTLAYSESKVEVY 90
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P+ + L +RI QIA G H LA+T +G+V SWG +G
Sbjct: 91 SWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNG 150
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+ + +A G S A+TE G+LY WG + LG+
Sbjct: 151 QLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGL 206
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA 97
P V +S GG ++ L + +WG + +LG GD P L L +I+ +
Sbjct: 14 PRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVV 73
Query: 98 NGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
G H+LA ++ +V+SWG+G G+LGH + + +P I AL + IACG S
Sbjct: 74 CGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCL 133
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
AVT +G++ WG ++ QLG+
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGL 154
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 12/162 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
ELYT+G + G+LG G + +P K++A + VS G TM LT GQ
Sbjct: 243 ELYTYGWSK-YGQLGHG------DCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQ 295
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG N ++G GD V P + D ++ QI+ G H++A+T+ V+SWG G
Sbjct: 296 LYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGT 355
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
+GQLG T + P +IEAL+ + +CG ++ T++
Sbjct: 356 NGQLGIGDTIDWNYPKIIEALSVDG----SCGQHIESSNTDQ 393
>gi|444918725|ref|ZP_21238787.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444709515|gb|ELW50526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 394
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 105/192 (54%), Gaps = 20/192 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG D G+LG G +E+ + P KV+ LP + ++ GG ++ L E ++W
Sbjct: 215 VWAWG-DNTLGQLGNGT---QDES---TTPVKVQGLPT-IKLIAAGGAHSLALDTENRVW 266
Query: 62 NWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
WG+N +LG G++ GG + P + NL DV+ Q+A G HSLALT+DG V +WG
Sbjct: 267 TWGSNDEGQLGNGNK-GGLRTLPIQVLNLKDVK--QLAAGIRHSLALTNDGNVMAWGSDS 323
Query: 120 HGQLGHSFT-QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG-- 176
GQLG + + Q P+ +L + V I+ G S S A+ G L+ WG+ QLG
Sbjct: 324 AGQLGDDLSLKEQLSPVETSSLTN--VIAISAGHSHSLALLSNGALFAWGSNSYGQLGGS 381
Query: 177 VPGLPVVQPCPV 188
P +P+ P PV
Sbjct: 382 TPTMPI--PLPV 391
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 14 LGLGPGRGPNEAGGLSIPSKVKALPVP------VAAVSCGGFFTMVLTEEGQLWNWGANS 67
L LG G G A GL+ S ++ P + A+S G F ++ L + G +W WG
Sbjct: 122 LALG-GDGSVWAWGLTNSSDIQMTPAKLPELSDIIAISAGTFHSLALQQSGSVWFWGELL 180
Query: 68 NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF 127
+ P L+ L I IA G HSLAL G V++WG GQLG+
Sbjct: 181 DQSSD--------TPVLVEGLSG--ITTIAAGNSHSLALDKSGVVWAWGDNTLGQLGNGT 230
Query: 128 TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
P+ ++ L + IA GG+ S A+ + +++ WG+ + QLG
Sbjct: 231 QDESTTPVKVQGL--PTIKLIAAGGAHSLALDTENRVWTWGSNDEGQLG 277
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 11/140 (7%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V+ VS G T+ L +G +W WG N +LG V P + L V+ +A+G
Sbjct: 61 VSQVSSRGQHTLALRTDGSVWAWGRNDAAQLGDETVVNRSAPTRVAGLSGVQ--SVASGY 118
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
+ SLAL DG V++WG + Q P + L+D + I+ G S A+ +
Sbjct: 119 FQSLALGGDGSVWAWGLTNSSDI-------QMTPAKLPELSD--IIAISAGTFHSLALQQ 169
Query: 161 KGKLYMWGNAKDSQLGVPGL 180
G ++ WG D P L
Sbjct: 170 SGSVWFWGELLDQSSDTPVL 189
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+ Q+++ G H+LAL DG V++WG QLG N+ P + L+ V +A G
Sbjct: 61 VSQVSSRGQHTLALRTDGSVWAWGRNDAAQLGDETVVNRSAPTRVAGLSG--VQSVASGY 118
Query: 153 STSAAVTEKGKLYMWG--NAKDSQLGVPGLP 181
S A+ G ++ WG N+ D Q+ LP
Sbjct: 119 FQSLALGGDGSVWAWGLTNSSDIQMTPAKLP 149
>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
Length = 1183
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 378 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 437
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 438 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDI 497
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 498 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 527
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 460 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD 512
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 513 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 572
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 573 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 631
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 515 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 567
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 568 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 627
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 628 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 664
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 301 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 360
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 361 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 420
Query: 176 G 176
G
Sbjct: 421 G 421
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 101/181 (55%), Gaps = 15/181 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ +WGR++ G LGLG A +P K++ +P+ V+ G ++ +T++G
Sbjct: 139 QVLSWGRNQ-NGELGLGT------AEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGN 191
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV---RIIQIANGGYHSLALTDDGKVFSWG 116
L+ WG LG GDR +LLP V V ++ +A G H++ ++ G +++ G
Sbjct: 192 LYGWGWGRYGNLGLGDR----NDRLLPEKVTVDGDKMAMVACGWRHTICVSSSGGLYTNG 247
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G +GQLGH ++ VP ++AL+D+F++ ++ G S A+T G+L WG K Q+G
Sbjct: 248 WGKYGQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIG 307
Query: 177 V 177
V
Sbjct: 308 V 308
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 9/177 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GRLG G + L IP +KAL + + ++CG + +T + Q
Sbjct: 87 DVYSWGWGD-FGRLGHG------DHSDLLIPHPIKALQGLMIQQIACGDSHCLAVTMDSQ 139
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N ELG G P+ + ++ I +A G HS+A+T DG ++ WG+G
Sbjct: 140 VLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGR 199
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ +P + D+ +ACG + V+ G LY G K QLG
Sbjct: 200 YGNLGLGDRNDRLLPEKVTVDGDKMAM-VACGWRHTICVSSSGGLYTNGWGKYGQLG 255
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ-LW 61
+WGR E +G+LG G + P+K+ AL + V+CG TM +E G+ ++
Sbjct: 37 SWGRGE-DGQLGHG------DTDDRLFPTKLSALDGQDIICVTCGADHTMARSESGRDVY 89
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG GD P + L + I QIA G H LA+T D +V SWG +G
Sbjct: 90 SWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNG 149
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+LG ++ +P I+ + + +A G S A+T+ G LY WG + LG+
Sbjct: 150 ELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGL 205
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 5 WGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWG 64
WGR G LGLG + +P KV +A V+CG T+ ++ G L+ G
Sbjct: 197 WGR---YGNLGLG------DRNDRLLPEKVTVDGDKMAMVACGWRHTICVSSSGGLYTNG 247
Query: 65 ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
+LG GD P+ + L D I Q++ G HS+ALT G++ WG+ GQ+G
Sbjct: 248 WGKYGQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIG 307
Query: 125 HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ PM + D+ V I+CG + AVTE+ +Y WG + QLG
Sbjct: 308 VGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLG 359
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
+ S+V A P V VS G ++ L + +WG + +LG GD P L L
Sbjct: 5 VMSEVAAPPRRVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALD 64
Query: 90 DVRIIQIANGGYHSLALTDDGK-VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
II + G H++A ++ G+ V+SWG+G G+LGH + +P I+AL + I
Sbjct: 65 GQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQI 124
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
ACG S AVT ++ WG ++ +LG+
Sbjct: 125 ACGDSHCLAVTMDSQVLSWGRNQNGELGL 153
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P KV+AL ++ VS G +M LT GQL WG N ++G G+ P +
Sbjct: 264 VPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFP 323
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
D ++ I+ G H++A+T+ V+SWG G +GQLG+ T ++ VP +IEA +
Sbjct: 324 HDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNVPTIIEAFS 376
>gi|307167569|gb|EFN61119.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 1546
Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 72/133 (54%), Gaps = 14/133 (10%)
Query: 49 FFTMVLTEEGQLWNW---GANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA 105
+F + LTEEG+++ W S E R RV G K RI+ IA G HSLA
Sbjct: 132 YFILALTEEGEVYYWKFINYKSGVEESRPTRVAGLSEK--------RIVDIACGSSHSLA 183
Query: 106 LTDDGKVFSWGYGGHGQLGHSFTQ--NQKVP-MVIEALADEFVTHIACGGSTSAAVTEKG 162
LT DGKV++WG GQ+G+ T N VP V L + V HIACG + + VT++
Sbjct: 184 LTSDGKVYAWGENNFGQVGNENTAIFNGSVPRQVKHELEKKNVIHIACGLTFNMVVTDEN 243
Query: 163 KLYMWGNAKDSQL 175
KLY WGN + Q+
Sbjct: 244 KLYGWGNNESGQI 256
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
+ + CG + + LT GQ++ WG + N + D + G ++ L I+ IA G
Sbjct: 1136 IVDIRCGFYNCLALTSHGQVYAWGKSINKHIYNADFLNGSVRQVKHELEKKNIVHIACGE 1195
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVT 159
++A+TD+ K++ WG GQ+ Q Q V P I +DE V + CG + +T
Sbjct: 1196 KFNMAVTDENKLYGWGMNDKGQISTVPLQEQYVHPHEITTFSDEIVK-LVCGYQHTLVLT 1254
Query: 160 EKGKLYMWGNAKDSQLGV 177
GK+Y WGN Q+GV
Sbjct: 1255 RNGKIYAWGNNNFGQVGV 1272
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANG 99
+ ++CG F M +T+E +L+ WG N ++ + P + D I+++ G
Sbjct: 1188 IVHIACGEKFNMAVTDENKLYGWGMNDKGQISTVPLQEQYVHPHEITTFSD-EIVKLVCG 1246
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
H+L LT +GK+++WG GQ+G + + P V+ V IA G+ S AV
Sbjct: 1247 YQHTLVLTRNGKIYAWGNNNFGQVGVNKNRKLSSPTVVNVPEMGKVLDIAAYGNLSVAVG 1306
Query: 160 EKGKLYMWG 168
+YMWG
Sbjct: 1307 NDRTIYMWG 1315
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 19/146 (13%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGAN---------SNYELGRGDRVGGWKPKLLPNLVDV 91
+ ++CG +VLT +G+++ W N +N++ G +V G + K
Sbjct: 664 IVDIACGNHHFLVLTSDGEVYAWEDNIYVHDIRDIANFD-GSVRQVNGLEKK-------- 714
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
+++IA G S+ +TD+ K++ WG GQ+ T+ P I ++D+ V + CG
Sbjct: 715 NVVRIACGSCFSIIVTDENKLYGWGDNRGGQISIFQTEKYIFPREIITISDKIVK-VVCG 773
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ +T KG +Y WGN Q+GV
Sbjct: 774 CMHTLVLTNKGNVYAWGNNCVGQVGV 799
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK------PKLLPNLVDVRII 94
V ++CG F++++T+E +L+ WG N RG ++ ++ P+ + + D +I+
Sbjct: 716 VVRIACGSCFSIIVTDENKLYGWGDN------RGGQISIFQTEKYIFPREIITISD-KIV 768
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
++ G H+L LT+ G V++WG GQ+G + + P+++ V +I
Sbjct: 769 KVVCGCMHTLVLTNKGNVYAWGNNCVGQVGVNKGRKPFGPIMVNVPQMGKVLNIDAFNDM 828
Query: 155 SAAVTEKGKLYMWG 168
S AV G +Y+WG
Sbjct: 829 SVAVGYDGTIYVWG 842
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVT 146
+L D RI+ I G Y+ LALT G+V++WG + + ++ N V V L + +
Sbjct: 1130 DLNDERIVDIRCGFYNCLALTSHGQVYAWGKSINKHIYNADFLNGSVRQVKHELEKKNIV 1189
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
HIACG + AVT++ KLY WG Q+
Sbjct: 1190 HIACGEKFNMAVTDENKLYGWGMNDKGQI 1218
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 66/227 (29%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGL---SIPSKVK--ALPVPVAAVSCGGFFTMVLT 55
++Y WG + G++G NE + S+P +VK V ++CG F MV+T
Sbjct: 189 KVYAWGENNF-GQVG-------NENTAIFNGSVPRQVKHELEKKNVIHIACGLTFNMVVT 240
Query: 56 EEGQLWNW------------------------------------------GANSNYELGR 73
+E +L+ W G++SN +
Sbjct: 241 DENKLYGWGNNESGQISSDNTSFSMTTFNGGSTDHRTSVFTHSLQNSPMFGSSSNSKNLF 300
Query: 74 G------DRVGGWKPKLLP-----NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
G + V K + P +++ +I+++A G H+LALT++ +VF+WG GQ
Sbjct: 301 GCSTTSINNVQSQKHYVYPREITYDMISSKIVKVACGYEHTLALTNNREVFAWGKNHIGQ 360
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
LG ++ P+ + V IA G+ S A +Y+WG+
Sbjct: 361 LGGNYNMQSSRPIKVNTPKMREVLDIAAHGNLSVAEGSDRTIYVWGD 407
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK 111
+++T++ ++N G + + GD+ + K + L + A+ Y LALT++G+
Sbjct: 84 IIVTKDKNVYNLGFDKDDCSTAGDK-RAFCLKKIEELCGKNLKTFAHNSYFILALTEEGE 142
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V+ W + + + + P + L+++ + IACG S S A+T GK+Y WG
Sbjct: 143 VYYWKF-----INYKSGVEESRPTRVAGLSEKRIVDIACGSSHSLALTSDGKVYAWGENN 197
Query: 172 DSQLG 176
Q+G
Sbjct: 198 FGQVG 202
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 76 RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
RV G+ K RI+ IA G +H L LT DG+V++W +
Sbjct: 655 RVSGFSTK--------RIVDIACGNHHFLVLTSDGEVYAWEDNIYVHDIRDIANFDGSVR 706
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ L + V IACG S VT++ KLY WG+ + Q+ +
Sbjct: 707 QVNGLEKKNVVRIACGSCFSIIVTDENKLYGWGDNRGGQISI 748
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 29 SIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV--GGWKPKLL 85
S P++V L + ++CG ++ LT +G+++ WG N+ ++G + G P+ +
Sbjct: 158 SRPTRVAGLSEKRIVDIACGSSHSLALTSDGKVYAWGENNFGQVGNENTAIFNGSVPRQV 217
Query: 86 PNLVDVR-IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+ ++ + +I IA G ++ +TD+ K++ WG GQ+ T
Sbjct: 218 KHELEKKNVIHIACGLTFNMVVTDENKLYGWGNNESGQISSDNT 261
Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 16/110 (14%)
Query: 19 GRGPNEAGGLSI--------PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
G G N G +SI P ++ + + V CG T+VLT +G ++ WG N +
Sbjct: 737 GWGDNRGGQISIFQTEKYIFPREIITISDKIVKVVCGCMHTLVLTNKGNVYAWGNNCVGQ 796
Query: 71 LGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYHSLALTDDGKVFSWG 116
+G G KP P +V+V +++ I S+A+ DG ++ WG
Sbjct: 797 VGVNK---GRKP-FGPIMVNVPQMGKVLNIDAFNDMSVAVGYDGTIYVWG 842
Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 19 GRGPNEAGGLSI---------PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNY 69
G G N+ G +S P ++ + + CG T+VLT G+++ WG N+N+
Sbjct: 1209 GWGMNDKGQISTVPLQEQYVHPHEITTFSDEIVKLVCGYQHTLVLTRNGKIYAWG-NNNF 1267
Query: 70 ELGRGDRVGGWKPKLL--PNLVDV----RIIQIANGGYHSLALTDDGKVFSWG 116
+VG K + L P +V+V +++ IA G S+A+ +D ++ WG
Sbjct: 1268 -----GQVGVNKNRKLSSPTVVNVPEMGKVLDIAAYGNLSVAVGNDRTIYMWG 1315
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Query: 18 PGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR 76
PG PN G ++ P + V V+CGG ++ L E+G+++ G N+ +LG +R
Sbjct: 12 PGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH-ER 70
Query: 77 VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPM 135
G KP+ + L D I+ +A G HSLAL+D G++FSWG G GQLG + + VP
Sbjct: 71 EGN-KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPR 129
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+I+ L + + ++CG A+ G+ + WG QLG+
Sbjct: 130 LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGL 171
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTIED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+ GG HS AL+ G VF WG
Sbjct: 158 FFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 97/192 (50%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWGR+ G+LGLG P++A P +V++L +P+A V GG + L+ G
Sbjct: 157 QFFTWGRN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVVAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L+++GQ
Sbjct: 54 EVYTCGVNT-KGQLGHEREGNKPEQIGALADQH--------IVHVACGESHSLALSDQGQ 104
Query: 60 LWNWGANSNYELGR---GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTIEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + + GG+ S A++ G ++ WG Q
Sbjct: 163 RNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA 149
GQLG T N K P ++ A AD F HI
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIV 364
>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
harrisii]
Length = 531
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--IVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ ++I++A G +HS+AL DG+V++WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E+Y WG + G++G G P KV L + V +++CG +M + + G
Sbjct: 148 EVYAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V ++QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 IYVTHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G++Y WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 669
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 96/192 (50%), Gaps = 24/192 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWG E GRLGLG + PS+V+ L V V G + VLT EG +
Sbjct: 343 ELYTWGAGE-NGRLGLG------DVADRHTPSRVEGLHSKVKEVYAGSVHSCVLTREGTV 395
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL-----VDVRIIQIANGGYHSLALTDDGKVFSW 115
+ +G + G GD P+L+P VR I + GGYH++ALT G+V++W
Sbjct: 396 YAFGKHEY--TGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAW 453
Query: 116 GYGGHGQL--GHSFTQNQKV--------PMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
G+ QL G+SFT + + P ++E+L + + G SAA+T G+LY
Sbjct: 454 GHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLY 513
Query: 166 MWGNAKDSQLGV 177
+ G QLG+
Sbjct: 514 VCGRNYQGQLGL 525
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 5/113 (4%)
Query: 68 NYELGRGDRVGGWK---PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
++E+G G GW P ++ L+ + + Q+ GG H+ LTD G++F+WG GG G+LG
Sbjct: 247 HHEVGEGGE--GWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLG 304
Query: 125 HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
H + + P IEAL +ACG + +AAVT G+LY WG ++ +LG+
Sbjct: 305 HGNREGLESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGL 357
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 20/154 (12%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV-------GGW---KPKLLPNLVDVR 92
+V GG+ TM LT +GQ++ WG N +LG G+ G + P+L+ +LV +
Sbjct: 433 SVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMN 492
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLG----HSFTQNQK-VPM-----VIEALAD 142
I+++ G HS ALT DG+++ G GQLG F QN++ P +I+ L
Sbjct: 493 IVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQH 552
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ IACGG S AV E G+++ +G + QLG
Sbjct: 553 LKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLG 586
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 37 LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQI 96
L + V V CGG VLT+ G+++ WG LG G+R G P+ + L + +Q+
Sbjct: 269 LGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEALEGIPCVQV 328
Query: 97 ANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
A G ++ A+T G++++WG G +G+LG ++ P +E L + V + G S
Sbjct: 329 ACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSK-VKEVYAGSVHSC 387
Query: 157 AVTEKGKLYMWGN 169
+T +G +Y +G
Sbjct: 388 VLTREGTVYAFGK 400
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPG----RGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLT 55
++Y WG + +LG+G R A L P V++L + + V G + LT
Sbjct: 449 QVYAWGHNR-VAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALT 507
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPK----------LLPNLVDVRIIQIANGGYHSLA 105
+GQL+ G N +LG G G + + L+ L ++I QIA GG HS+A
Sbjct: 508 VDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVA 567
Query: 106 LTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD--EFVTHIACGGSTS 155
+ ++G+V+S+G G GQLGH T + P +++AL + H+ACG + +
Sbjct: 568 VAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRREIMHVACGNNCT 619
>gi|357121203|ref|XP_003562310.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 480
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 94/189 (49%), Gaps = 26/189 (13%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
L+ WG+++G P G P+ V + VSCG M L+E+G L
Sbjct: 141 RLWVWGQNQGSDY--------PRLFWGAFAPNTV------ILQVSCGAVHVMALSEDGVL 186
Query: 61 WNWGANSNYELGRG--------DRVGGWKPKLLPNLVD-VRIIQIANGGYHSLALTDDGK 111
WG N +LGRG RV + L + + V+I++++ G YH+ A+++ G+
Sbjct: 187 QAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDDAPELVKIVRVSCGEYHAAAISEHGE 246
Query: 112 VFSWGYGGHGQLGHSFTQN---QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
V++WG G GQLGH Q+ + +P + AL ++CGG S AVTE G LY WG
Sbjct: 247 VYTWGLGSMGQLGHRSLQSGDKELIPRRVVALEGMVAGDVSCGGVHSCAVTEGGTLYAWG 306
Query: 169 NAKDSQLGV 177
QLG+
Sbjct: 307 GGHVGQLGL 315
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 17/131 (12%)
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLV-------DVRIIQIANGGYHSLALTDDGK 111
++ WG N + + R + + PK LP + ++R I IA G H+ A+ DG
Sbjct: 21 IYIWGYNQSGQTARKGKDRHLRIPKSLPPKLFKCRDGENLRWIDIACGREHTAAVASDGS 80
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE---------KG 162
+F+WG GQLG ++ K P + A+ EFV ++CG +AA+ E K
Sbjct: 81 LFTWGANDFGQLGDGTEESAKEPKKVNAIETEFVKSVSCGAHCTAAIAEPRENDGTISKS 140
Query: 163 KLYMWGNAKDS 173
+L++WG + S
Sbjct: 141 RLWVWGQNQGS 151
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 80/175 (45%), Gaps = 16/175 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAA-VSCGGFFTMVLTEEGQ 59
E+YTWG G +G R IP +V AL VA VSCGG + +TE G
Sbjct: 246 EVYTWGL----GSMGQLGHRSLQSGDKELIPRRVVALEGMVAGDVSCGGVHSCAVTEGGT 301
Query: 60 LWNWGANSNYELGRGDRVGGWKPKL---------LPNLVDVRIIQIANGGY-HSLALTDD 109
L+ WG +LG G + G + L +P LV +++ G+ H+L D
Sbjct: 302 LYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVIPSGVRLVTCGHSHTLISMKD 361
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
G+++ WGY +GQ + + P ++ E V +A GG SA +T+ L
Sbjct: 362 GRIYGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRRLAAGGGHSAVLTDASSL 415
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 19/146 (13%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK---PKLLPNLVDVRIIQ 95
V + VSCG + ++E G+++ WG S +LG G K P+ + L +
Sbjct: 226 VKIVRVSCGEYHAAAISEHGEVYTWGLGSMGQLGHRSLQSGDKELIPRRVVALEGMVAGD 285
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLG-------HSFTQN------QKVPMVIEALAD 142
++ GG HS A+T+ G +++WG G GQLG S N + +P+++
Sbjct: 286 VSCGGVHSCAVTEGGTLYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVIPSGV 345
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWG 168
VT CG S + + G++Y WG
Sbjct: 346 RLVT---CGHSHTLISMKDGRIYGWG 368
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 71/200 (35%), Gaps = 64/200 (32%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
++CG T + +G L+ WGAN +LG G +PK + N ++ ++ + G H
Sbjct: 65 IACGREHTAAVASDGSLFTWGANDFGQLGDGTEESAKEPKKV-NAIETEFVKSVSCGAHC 123
Query: 104 LALT-----DDGKVF--------------------------------------------- 113
A +DG +
Sbjct: 124 TAAIAEPRENDGTISKSRLWVWGQNQGSDYPRLFWGAFAPNTVILQVSCGAVHVMALSED 183
Query: 114 ----SWGYGGHGQLGHSFT----QNQKVPMVIEALADEF-----VTHIACGGSTSAAVTE 160
+WGY +GQLG T Q +V D+ + ++CG +AA++E
Sbjct: 184 GVLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDDAPELVKIVRVSCGEYHAAAISE 243
Query: 161 KGKLYMWGNAKDSQLGVPGL 180
G++Y WG QLG L
Sbjct: 244 HGEVYTWGLGSMGQLGHRSL 263
>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1149
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 103/181 (56%), Gaps = 13/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS-IPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
++TWG EG+LG+G E+ +S +P+K+ +L + + VSCG + ++ L+E+G
Sbjct: 251 RVFTWGAG-SEGQLGIG------ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDG 303
Query: 59 QLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
Q+++WG+N +LG G+ + P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 304 QVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGN 363
Query: 118 GGHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
GQL G+S + P I AL V +I+CG ++ +TE G+++ +G + Q
Sbjct: 364 NRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQ 423
Query: 175 L 175
L
Sbjct: 424 L 424
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 101/182 (55%), Gaps = 10/182 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+Y+ G D G+LG + P P ++AL V + VSCG ++ + +G+
Sbjct: 199 RVYSCG-DNSRGQLG---QKSPQSTKR---PEPIQALSTVHIDLVSCGKEHSVAVCHQGR 251
Query: 60 LWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WGA S +LG G+ + + P + +L ++IIQ++ G YHSLAL++DG+VFSWG
Sbjct: 252 VFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSN 311
Query: 119 GHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + +Q P +++L + +A GG+ S A++ G + WGN + QL +
Sbjct: 312 RQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLAL 371
Query: 178 PG 179
G
Sbjct: 372 SG 373
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++++ G NS +LG+ +P+ + L V I ++ G HS+A+ G
Sbjct: 191 SLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQG 250
Query: 111 KVFSWGYGGHGQLGHSFTQNQK-VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG ++ +P I +LA + ++CG S A++E G+++ WG+
Sbjct: 251 RVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGS 310
Query: 170 AKDSQLGV 177
+ QLG+
Sbjct: 311 NRQGQLGL 318
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 11/161 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG + +G+LGLG N + P KVK+L +P+A V+ GG + L+ G
Sbjct: 304 QVFSWGSNR-QGQLGLG-----NNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGT 357
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG N + +L G + +KP + L + ++ I+ G H+ LT+DG+VF++G
Sbjct: 358 SFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFG 417
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
QL HS + P +IE + V+ I CG + A
Sbjct: 418 GSSSEQLQHSPRSGRGGPQLIEGIGGH-VSQIECGSYHTIA 457
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%)
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
G +P+ L +++++ A+G HSL L + +V+S G GQLG Q+ K P I
Sbjct: 166 GRRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPI 225
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+AL+ + ++CG S AV +G+++ WG + QLG+
Sbjct: 226 QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI 265
>gi|145539346|ref|XP_001455363.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423171|emb|CAK87966.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 95/183 (51%), Gaps = 19/183 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+TWG G LG G + G+S+P VK VA V G + ++T EG+L+
Sbjct: 15 LFTWG--SSNGSLGYAVG-SQQQMKGVSMPQLVKGFNNNVAQVQMGQNHSALITSEGELY 71
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLV--DVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
WG ++ +LG + P+L+ ++++ Q+A G YH++ALT DG V++WGYGG
Sbjct: 72 TWGTGNSGQLGHNNDKDYITPQLVEFFTKHNLKVKQVALGDYHTVALTHDGDVWTWGYGG 131
Query: 120 H-------------GQLGHSFTQNQKVPMVIEALAD-EFVTHIACGGSTSAAVTEKGKLY 165
G LGH ++N+ P ++AL + + +I G + A+ E +LY
Sbjct: 132 KEQNFLMDLLFLQVGALGHGNSKNRYTPTPVKALRSLKKIKYIQSGLRFTNAINENNELY 191
Query: 166 MWG 168
+WG
Sbjct: 192 VWG 194
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 54 LTEEGQLWNWGANSN---YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
L G L+ WG+++ Y +G ++ G L + + Q+ G HS +T +G
Sbjct: 9 LFSTGSLFTWGSSNGSLGYAVGSQQQMKGVSMPQLVKGFNNNVAQVQMGQNHSALITSEG 68
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF--VTHIACGGSTSAAVTEKGKLYMWG 168
++++WG G GQLGH+ ++ P ++E V +A G + A+T G ++ WG
Sbjct: 69 ELYTWGTGNSGQLGHNNDKDYITPQLVEFFTKHNLKVKQVALGDYHTVALTHDGDVWTWG 128
Query: 169 NAKDSQLGVPGLPVVQ 184
Q + L +Q
Sbjct: 129 YGGKEQNFLMDLLFLQ 144
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 35/204 (17%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
ELYTWG G+LG N P V+ + V V+ G + T+ LT +
Sbjct: 69 ELYTWGTGN-SGQLG------HNNDKDYITPQLVEFFTKHNLKVKQVALGDYHTVALTHD 121
Query: 58 GQLWNWG---ANSNY----------ELGRGDRVGGWKP---KLLPNLVDVRIIQIANGGY 101
G +W WG N+ LG G+ + P K L +L ++ IQ +G
Sbjct: 122 GDVWTWGYGGKEQNFLMDLLFLQVGALGHGNSKNRYTPTPVKALRSLKKIKYIQ--SGLR 179
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-------VTHIACGGST 154
+ A+ ++ +++ WG G +G G ++ +P E + + +
Sbjct: 180 FTNAINENNELYVWGKGDYGVFGDGNNKSFNIPQRNEFFEGYLKKKQNLSIVKLKSCNNY 239
Query: 155 SAAVTEKGKLYMWGNAKDSQLGVP 178
S A+ G LY WG+ Q+GV
Sbjct: 240 SVALMSDGNLYGWGSNDFGQIGVK 263
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 66/174 (37%), Gaps = 22/174 (12%)
Query: 15 GLGPGRGPNEAGGLSIPSKVKALPV--PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
LG G N P+ VKAL + + G FT + E +L+ WG G
Sbjct: 147 ALGHGNSKNRY----TPTPVKALRSLKKIKYIQSGLRFTNAINENNELYVWGKGDYGVFG 202
Query: 73 RGDRVGGWKPK-------LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH 125
G+ P+ L ++ I+++ + +S+AL DG ++ WG GQ+G
Sbjct: 203 DGNNKSFNIPQRNEFFEGYLKKKQNLSIVKLKSCNNYSVALMSDGNLYGWGSNDFGQIGV 262
Query: 126 SF--------TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
T N ++ + D + A + + ++Y W +K
Sbjct: 263 KIEIGVEIYETANFPTQVLKDKFGDNKIVDFVVAEDLVAVLLDNNEVY-WSGSK 315
>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
[Ornithorhynchus anatinus]
Length = 531
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++ L + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--IVPKKLELLSGKKIKSLSYGSGPHVLLSTEDGIVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ ++ ++A G +HS+AL DDG+V++WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E+Y WG + G++G G P KV L + V +++CG +M + + G
Sbjct: 148 EVYAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V ++QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 IYVTHSDEVFVFGVNCSNCLGTGDNQSTIVPKKLELLSGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ + L + VT +ACG S A+ + G++Y WG
Sbjct: 95 IVYAWGHNGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 907
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 13/173 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+TWG D + RLG G ++ L + V+CG T+ LT G++
Sbjct: 267 KLFTWG-DGDKHRLGHG-----DKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKV 320
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
W G + +LG + G +P L+ + + ++QIA G YH LT +VF+WG G
Sbjct: 321 WTMGNSVYGQLGNPNSDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGA 378
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+G+LGH +++KVP +EAL D V HIACG + +AA+ L+ W + D
Sbjct: 379 NGRLGHGDVEDRKVPTTVEALRDRAVRHIACGANFTAAIC----LHKWVSGAD 427
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 22/191 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
E++TWG D G GRLG G P V++L + V+CG F T +T G+
Sbjct: 97 EVFTWGEDSG-GRLGHGTREDSVH------PRLVESLAASNIDFVACGEFHTCAVTTTGE 149
Query: 60 LWNWGANSNYE--LGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L+ WG ++ LG G VG W P+ + L ++I ++ G +H+ +T G++F++G
Sbjct: 150 LYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFG 209
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE-----------KGKLY 165
G G LGH ++ P +E+L+ +ACG +AA+ E GKL+
Sbjct: 210 DGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLF 269
Query: 166 MWGNAKDSQLG 176
WG+ +LG
Sbjct: 270 TWGDGDKHRLG 280
Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP---VAAVSCGGFFTMVLTEE 57
ELYTWG +G +GL G G + G IP ++ P+ +A VSCG + T ++T
Sbjct: 149 ELYTWG--DGTHNVGL-LGHGTDV--GHWIPRRISG-PLEGLQIAYVSCGTWHTALITSM 202
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G S LG G+ P+ + +L ++ I +A G +H+ A+ +
Sbjct: 203 GQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSAT 262
Query: 109 --DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
GK+F+WG G +LGH + + P + +L D +ACG S + +T GK++
Sbjct: 263 VSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWT 322
Query: 167 WGNAKDSQLGVPGLPVVQPCPVE 189
GN+ QLG P +PC VE
Sbjct: 323 MGNSVYGQLGNPN-SDGRPCLVE 344
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 20/188 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G +S P +V++L + AV+CG + T + E
Sbjct: 204 QLFTFG-DGSFGVLGHG------NVKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIV 256
Query: 57 --------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+L+ WG + LG GD+ KP + +L+D ++A G ++ LT
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTT 316
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GKV++ G +GQLG+ + + +V + +A E V IACG A +T + +++ WG
Sbjct: 317 SGKVWTMGNSVYGQLGNPNSDGRPC-LVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWG 375
Query: 169 NAKDSQLG 176
+ +LG
Sbjct: 376 KGANGRLG 383
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 37 LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQI 96
L + V V CG ++T G+++ WG +S LG G R P+L+ +L I +
Sbjct: 75 LVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAASNIDFV 134
Query: 97 ANGGYHSLALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGS 153
A G +H+ A+T G++++WG G H G LGH +P I L + +++CG
Sbjct: 135 ACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTW 194
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQ--PCPVE 189
+A +T G+L+ +G D GV G V+ CP E
Sbjct: 195 HTALITSMGQLFTFG---DGSFGVLGHGNVKSISCPRE 229
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 51/89 (57%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L + + + + + G H+ +T +G+VF+WG G+LGH ++ P ++E+LA
Sbjct: 68 PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+ +ACG + AVT G+LY WG+
Sbjct: 128 ASNIDFVACGEFHTCAVTTTGELYTWGDG 156
>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1185
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 103/181 (56%), Gaps = 13/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS-IPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
++TWG EG+LG+G E+ +S +P+K+ +L + + VSCG + ++ L+E+G
Sbjct: 251 RVFTWGAG-SEGQLGIG------ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDG 303
Query: 59 QLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
Q+++WG+N +LG G+ + P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 304 QVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGN 363
Query: 118 GGHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
GQL G+S + P I AL V +I+CG ++ +TE G+++ +G + Q
Sbjct: 364 NRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQ 423
Query: 175 L 175
L
Sbjct: 424 L 424
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 101/182 (55%), Gaps = 10/182 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+Y+ G D G+LG + P P ++AL V + VSCG ++ + +G+
Sbjct: 199 RVYSCG-DNSRGQLG---QKSPQSTKR---PEPIQALSTVHIDLVSCGKEHSVAVCHQGR 251
Query: 60 LWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WGA S +LG G+ + + P + +L ++IIQ++ G YHSLAL++DG+VFSWG
Sbjct: 252 VFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSN 311
Query: 119 GHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + +Q P +++L + +A GG+ S A++ G + WGN + QL +
Sbjct: 312 RQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLAL 371
Query: 178 PG 179
G
Sbjct: 372 SG 373
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++++ G NS +LG+ +P+ + L V I ++ G HS+A+ G
Sbjct: 191 SLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQG 250
Query: 111 KVFSWGYGGHGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG ++ +P I +LA + ++CG S A++E G+++ WG+
Sbjct: 251 RVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGS 310
Query: 170 AKDSQLGV 177
+ QLG+
Sbjct: 311 NRQGQLGL 318
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 11/161 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG + +G+LGLG N + P KVK+L +P+A V+ GG + L+ G
Sbjct: 304 QVFSWGSNR-QGQLGLG-----NNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGT 357
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG N + +L G + +KP + L + ++ I+ G H+ LT+DG+VF++G
Sbjct: 358 SFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFG 417
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
QL HS + P +IE + V+ I CG + A
Sbjct: 418 GSSSEQLQHSPRSGRGGPQLIEGIGGH-VSQIECGSYHTIA 457
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%)
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
G +P+ L +++++ A+G HSL L + +V+S G GQLG Q+ K P I
Sbjct: 166 GRRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPI 225
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+AL+ + ++CG S AV +G+++ WG + QLG+
Sbjct: 226 QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI 265
>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 1082
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 278 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 337
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V +
Sbjct: 338 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDV 397
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 398 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 427
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V V+CG T+ LT++
Sbjct: 360 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD 412
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 413 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 472
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 473 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 531
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 415 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 467
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 468 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 527
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 528 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 564
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 201 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 260
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 261 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 320
Query: 176 G 176
G
Sbjct: 321 G 321
>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
familiaris]
Length = 1015
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 98/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG G + N IP K+K L + + VSCG + ++ L+E GQ
Sbjct: 95 RVFAWGAG-SEGQLGTGEFKETN-----LIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQ 148
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG+NS+ +LG G + P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 149 VFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRN 208
Query: 119 GHGQLG---HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL ++ + P I AL + V +I+CG + +T+ GK++ +G+ QL
Sbjct: 209 NAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQL 268
Query: 176 G 176
G
Sbjct: 269 G 269
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 12/173 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG + +G+LGLG + P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGSN-SDGQLGLG-KKFPSQAS----PQRVRSLDGIPLAQVAAGGAHSFALSLSGT 201
Query: 60 LWNWGANSNYELG-RGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG N+ +L + V G +KP + L ++ +I I+ G H++ LT +GKVF++G
Sbjct: 202 SFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWG 168
+GQLGHS T + P ++E + D V+ I CG T A V GK+ +G
Sbjct: 262 DNTYGQLGHSPTAEKSGPQLVEGI-DGLVSQIDCGSYHTLAYVYTTGKVVSFG 313
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 93/174 (53%), Gaps = 11/174 (6%)
Query: 8 DEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGAN 66
D G G+LG RG + L +++AL + V VSCG ++ + +G+++ WGA
Sbjct: 49 DNGRGQLG---QRGAPCSAQLK---RIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAG 102
Query: 67 SNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ--L 123
S +LG G+ + P + L D++I Q++ G YHSLAL++ G+VFSWG GQ L
Sbjct: 103 SEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGL 162
Query: 124 GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G F +Q P + +L + +A GG+ S A++ G + WG QL +
Sbjct: 163 GKKFP-SQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLAL 215
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V + + G +++L GQ+ + G N +LG+ + K + L + + ++
Sbjct: 23 VELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIRALETLHVDLVSC 82
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
G HSLA+ G+VF+WG G GQLG F + +PM I+ L D + ++CG S A
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLA 142
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
++E G+++ WG+ D QLG+
Sbjct: 143 LSEGGQVFSWGSNSDGQLGL 162
>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
catus]
Length = 993
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 107/180 (59%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG D EG++GL + + +P +V + P++ +SCG + + +T EG+L
Sbjct: 160 ELFMWG-DNSEGQIGL------KDVTNVCVPQQV-TVGKPISWISCGYYHSAFVTTEGEL 211
Query: 61 WNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G + +LG +++ P+ +P + + +++Q+A GG H++ LT+ V+++G G
Sbjct: 212 YTFGEPESGKLGLPNQLLCNHRMPQPVPGIPE-KVVQVACGGGHTVVLTEKA-VYTFGLG 269
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F VP VIE + D+ ++ I+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 270 QFGQLGLGTFLFETSVPKVIEHVKDQKISSISCGENHTALITDIGLMYTFGDGRYGKLGL 329
Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G+
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGK 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD L+ +I Q++ G S ALT+DG++F WG
Sbjct: 108 VYAAGGNNEGQLGLGDTEERNTFHLISFFTSQHKIKQLSAGSNTSAALTEDGELFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + ++ I+CG SA VT +G+LY +G + +LG+P
Sbjct: 168 SEGQIGLKDVTNVCVPQ--QVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLP 225
Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+IPSK +SCG T V+T +L+ +G+N+ +LG G + KP + L
Sbjct: 25 NIPSKFWFKNDIPTVLSCGDEHTAVVTGNKKLYMFGSNNWGQLGLGSKSTVSKPTCVKAL 84
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTH 147
++ A G H+L T+ GKV++ G GQLG T+ + +I + +
Sbjct: 85 KPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLISFFTSQHKIKQ 144
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
++ G +TSAA+TE G+L+MWG+ + Q+G+
Sbjct: 145 LSAGSNTSAALTEDGELFMWGDNSEGQIGL 174
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 100/188 (53%), Gaps = 6/188 (3%)
Query: 1 ELYTWGRDEGEGRLGLGP--GRGP-NEA-GGLSIPSKVKALP-VPVAAVSCGGFFTMVLT 55
+Y WGR + G+LG+G + P NE+ G S P +KA V V+CG F + +T
Sbjct: 181 RVYVWGRGD-SGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVT 239
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
E+G ++ WG LG G PK L D+ +++++ GG+H++ + G +++
Sbjct: 240 EQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAF 299
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G +G+LG T+++ P +++AL + V ACGGS + VT G Y+ G +L
Sbjct: 300 GRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRL 359
Query: 176 GVPGLPVV 183
G+ + +
Sbjct: 360 GLADMKAL 367
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 13/180 (7%)
Query: 11 EGRLGLGPGRGP----NEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGA 65
+G+LG G R P ++ + P ++ LP + AVSCG TM LT G +++WG
Sbjct: 16 DGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYSWGW 75
Query: 66 NSNYELGRGDRVGGWKPKLLPNLVDVR--IIQIANGGYHSLALTDDGKVFSWGYGGHGQL 123
S +LG GD +P+ + R + I+ GG HS A+T DG ++ WG GQL
Sbjct: 76 GSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYVWGESHWGQL 135
Query: 124 G---HSFTQNQKVPM---VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G ++ +P+ + E A E + ++CGG+ +AA+T G++Y+WG QLG+
Sbjct: 136 GLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGI 195
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 73/142 (51%), Gaps = 11/142 (7%)
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
++GQL GA L D P+ + NL D I+ ++ G H++ALT G V+SW
Sbjct: 15 DDGQLGT-GAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYSW 73
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEF--VTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
G+G GQLGH + P I E V +I+CGG SAAVT+ G LY+WG +
Sbjct: 74 GWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYVWGESHWG 133
Query: 174 QLGVP--------GLPVVQPCP 187
QLG+P LPV P P
Sbjct: 134 QLGLPKEYEAAHESLPVKCPMP 155
>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
niloticus]
Length = 4936
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 538 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 588
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 589 TVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 648
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA V I+ G S A++ ++Y WGN Q G
Sbjct: 649 ACLGCGSSEATALR-PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 705
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + ++E+G+L
Sbjct: 485 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVSEDGEL 539
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 540 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 597
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P V+EAL F+ + G +S A+T G++Y WG
Sbjct: 598 NGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 646
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGG 100
V CG T V+ G + G S LG+G+ ++ L V +++
Sbjct: 4107 VVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4166
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
HS+ALT+ G+VFSWG G +G+LGH + Q+ P IEAL E V ++CG SA VT
Sbjct: 4167 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA 4226
Query: 161 KGKLYMWGNAKDSQLGV 177
GKL+ +GN +LG+
Sbjct: 4227 DGKLFTFGNGDYGRLGL 4243
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 91/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4132 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4188
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4189 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN 4248
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL V +ACG + + V+ G + + +G+ +LG+
Sbjct: 4249 KKLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGL 4296
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 2 LYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G+
Sbjct: 4281 MMVWAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGK 4334
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ +G + L G +P+ +P L + I +A G H+L L+ G V++WG
Sbjct: 4335 VFTFGQDRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNS 4394
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + + P ++ L + + I+ G SAA
Sbjct: 4395 EGQLGLGHTNHVREPTLVTTLQGKNIHQISAGRCHSAA 4432
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANG 99
+ G + T V++ +G + G S LG GD K L P+ ++
Sbjct: 414 TIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGS 473
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAV 158
H+LA T +G+VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAV
Sbjct: 474 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV 533
Query: 159 TEKGKLYMWGNAKDSQLG 176
+E G+LY WG +LG
Sbjct: 534 SEDGELYTWGEGDFGRLG 551
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG D G+LG G P +++AL V +SCG + V+T +G+
Sbjct: 4177 EVFSWG-DGDYGKLGHGNSDRQRR------PRQIEALQGEEVVQMSCGFKHSAVVTADGK 4229
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYG 118
L+ +G LG G+ P+ + L + Q+A G H+L ++ DG V+++G G
Sbjct: 4230 LFTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDG 4289
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+G+LG + + P ++ L + +ACG S A+T+ GK++ +G +D +G+P
Sbjct: 4290 DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFG--QDRLIGLP 4347
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L V +S G + L+ + +
Sbjct: 641 QVYAWG-------CGACLGCGSSEATALR-PKLIEELATTRVVDISIGDSHCLALSHDNE 692
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L V I QI+ G HSL AL D +V +W
Sbjct: 693 VYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 752
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 526 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 576
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 577 TVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 636
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA V I+ G S A++ ++Y WGN Q G
Sbjct: 637 ACLGCGSSEATALR-PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 693
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4042 GRLGQG---NSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGK 4098
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+FS+G G +G+LG T N
Sbjct: 4099 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSN 4158
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKG-KLYMWGNAKDSQLGV 177
+K+P + AL V +ACG + + AV+ G ++ +G+ +LG+
Sbjct: 4159 KKLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGL 4206
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + ++E+G+L
Sbjct: 473 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVSEDGEL 527
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 528 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 585
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P V+EAL F+ + G +S A+T G++Y WG
Sbjct: 586 NGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 634
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Query: 2 LYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G
Sbjct: 4191 MTVWAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGN 4244
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ +G + L G +P+ +P L V I +A G H+L L+ G V++WG
Sbjct: 4245 VYTFGQDRLIGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNS 4304
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG T + + P +I AL + + I+ G SAA T
Sbjct: 4305 EGQLGLGHTNHVREPTLISALQGKNIQQISAGRCHSAAWT 4344
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 368 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 413
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 414 SSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGE 473
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAV+E G+LY WG
Sbjct: 474 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 533
Query: 171 KDSQLG 176
+LG
Sbjct: 534 DFGRLG 539
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+++G + GRLGLG +P +V AL V V+CG T+ ++ +G
Sbjct: 4139 KLFSFGNGD-YGRLGLG------NTSNKKLPERVSALEGHQVGQVACGLNHTLAVSADGM 4191
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4192 TVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQD 4251
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P + AL F+ +A G + ++ G +Y WG+ + QLG+
Sbjct: 4252 RLIGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGL 4310
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L V +S G + L+ + +
Sbjct: 629 QVYAWG-------CGACLGCGSSEATALR-PKLIEELATTRVVDISIGDSHCLALSHDNE 680
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L V I QI+ G HSL AL D +V +W
Sbjct: 681 VYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 740
>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3089
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 541 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 591
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 592 TVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 651
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA V I+ G S A++ ++Y WGN Q G
Sbjct: 652 ACLGCGSSEATALR-PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 708
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + ++E+G+L
Sbjct: 488 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVSEDGEL 542
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 543 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 600
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P V+EAL F+ + G +S A+T G++Y WG
Sbjct: 601 NGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 649
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 33 KVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLV 89
K+ A + G + T V++ +G + G S LG GD K L P+
Sbjct: 407 KLAATFADAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRA 466
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHI 148
++ H+LA T +G+VFSWG G +G+LGH + QK P +I+ L + V +
Sbjct: 467 IKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCV 526
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ G SAAV+E G+LY WG +LG
Sbjct: 527 SAGYRHSAAVSEDGELYTWGEGDFGRLG 554
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L V +S G + L+ + +
Sbjct: 644 QVYAWG-------CGACLGCGSSEATALR-PKLIEELATTRVVDISIGDSHCLALSHDNE 695
Query: 60 LWNWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L V I QI+ G HSL AL D +V +W
Sbjct: 696 VYAWGNNSMGQCGQGNSTGPITKPKKVVGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 755
>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
CCMP2712]
Length = 308
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG G LG G + L P + ++P + ++CG F T+ + ++G L
Sbjct: 18 RVYSWGC--ANGALGHGNSKSQLLPKALDRP-LIYSMP-SITTIACGEFHTLAVGQDGTL 73
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG N +LG GD P+ + L I+ A GG HSL LT+ KV+++G
Sbjct: 74 WTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVF 133
Query: 121 GQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG S + P ++ L V HI CG S S A+ + +LY WG QLG+
Sbjct: 134 GQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGRNDCGQLGL 191
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 21 GPNEAGGLSIPSKVKALPVP----------VAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
G N G L + SKVK P V ++CG +M L + QL++WG N +
Sbjct: 129 GSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGRNDCGQ 188
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD---------GKVFSWGYGGHG 121
LG G P+ L ++ QI+ G H++A + KV++WG G G
Sbjct: 189 LGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEG 248
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLGH ++ VP V++ L + +A GG +SAA+ E +LY WG +++ QLG
Sbjct: 249 QLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWGCSREGQLG 303
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 12/141 (8%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII-------QI 96
+CG T+ LTEEG++++WG +N LG G+ K +LLP +D +I I
Sbjct: 3 AACGKLHTVALTEEGRVYSWGC-ANGALGHGNS----KSQLLPKALDRPLIYSMPSITTI 57
Query: 97 ANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
A G +H+LA+ DG +++WG +GQLGH + K+P +EAL + A GG S
Sbjct: 58 ACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSL 117
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
+TE K+Y +G+ QLG+
Sbjct: 118 VLTEANKVYAFGSNVFGQLGL 138
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE--- 57
+LY+WGR++ G+LGLG R L++ K + V +SCG + E
Sbjct: 177 QLYSWGRNDC-GQLGLGHYRSSPVPEHLTMFKKSQ-----VQQISCGYDHNIAFVSEYAG 230
Query: 58 ------GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK 111
+++ WG +LG + PK++ L+ I +A GG+ S A+ + +
Sbjct: 231 PGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQ 290
Query: 112 VFSWGYGGHGQLGH 125
+++WG GQLGH
Sbjct: 291 LYTWGCSREGQLGH 304
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++YTWGR E EG+LG +E +P V+ L + AV+ GGF + + E Q
Sbjct: 238 KVYTWGRGE-EGQLG------HDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQ 290
Query: 60 LWNWGANSNYELGRGDRV 77
L+ WG + +LG GD +
Sbjct: 291 LYTWGCSREGQLGHGDDI 308
>gi|326436402|gb|EGD81972.1| hypothetical protein PTSG_02656 [Salpingoeca sp. ATCC 50818]
Length = 5125
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 19 GRGPNEAGGLSIPSKVKAL-PVP----VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR 73
G G N GL +L PVP V V+CG + +T GQL+ WG N + LG
Sbjct: 3171 GTGKNGKLGLRDTRDQSSLVPVPGLRDVLRVACGRRHSAAVTATGQLYMWGCNHHGRLGL 3230
Query: 74 GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV 133
GD+ ++P L+PNL V++ +A G H+L LT G V+S+G G G+LG ++ +
Sbjct: 3231 GDQNDRYEPTLVPNLPPVQM--VACGDRHTLVLTQRGGVYSFGCGDQGRLGIPEAPHKLL 3288
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+T + CG ++SAA+T+ G+LY+WG + +LG
Sbjct: 3289 RPAKLDFGRARMTRVICGCNSSAALTDTGQLYVWGTGRSYRLG 3331
Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 16/192 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+LY WG + GRLGLG E P+ V LP PV V+CG T+VLT+ G +
Sbjct: 3216 QLYMWGCNH-HGRLGLGDQNDRYE------PTLVPNLP-PVQMVACGDRHTLVLTQRGGV 3267
Query: 61 WNWGANSNYELGRGDRVGGWKPKLL-PNLVD---VRIIQIANGGYHSLALTDDGKVFSWG 116
+++G LG + KLL P +D R+ ++ G S ALTD G+++ WG
Sbjct: 3268 YSFGCGDQGRLG----IPEAPHKLLRPAKLDFGRARMTRVICGCNSSAALTDTGQLYVWG 3323
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LG + +P+ + LA + + G AV+E G +++WG+ SQLG
Sbjct: 3324 TGRSYRLGTGSMTSHMLPIRVTDLASHKIVDASLGHEHGVAVSETGDVFVWGSNDSSQLG 3383
Query: 177 VPGLPVVQPCPV 188
P P+
Sbjct: 3384 GATADAAAPRPL 3395
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 28/195 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E+Y+WG + LG P +P+K+ + V+ GG + ++E+G
Sbjct: 150 EVYSWGSNS---YAQLGRNDDP------IVPTKITRGFGRSSIVYVAVGGQHSAAVSEDG 200
Query: 59 QLWNWGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANG--GYHSLALTDDGKVFS 114
L+ WG S LG G D V +P L D+ I +A G H+LAL+ DG +++
Sbjct: 201 VLYTWGRGSYGRLGHGTSDDVAFPQPVLALKSKDILIATVACGIGDAHTLALSRDGVIYA 260
Query: 115 WGYGGHG------------QLGHSFTQNQKVPMVIEALAD-EFVTHIACGGSTSAAVTEK 161
+G G +G +LG T+ +VP+ I D V + CG SA +TE
Sbjct: 261 FGDGDYGWGPAPATGGASGKLGLGSTERTRVPVAIPCDFDGTKVKQVWCGRQISACLTEG 320
Query: 162 GKLYMWGNAKDSQLG 176
G LY WGNA LG
Sbjct: 321 GALYTWGNASGGALG 335
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 17/140 (12%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP----KLLPNLVDVRII 94
V VAA+ + LT G++++WG+NS +LGR D P K+ I+
Sbjct: 134 VQVAAID----HVLALTTRGEVYSWGSNSYAQLGRND-----DPIVPTKITRGFGRSSIV 184
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL--ADEFVTHIAC-- 150
+A GG HS A+++DG +++WG G +G+LGH + + P + AL D + +AC
Sbjct: 185 YVAVGGQHSAAVSEDGVLYTWGRGSYGRLGHGTSDDVAFPQPVLALKSKDILIATVACGI 244
Query: 151 GGSTSAAVTEKGKLYMWGNA 170
G + + A++ G +Y +G+
Sbjct: 245 GDAHTLALSRDGVIYAFGDG 264
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 16/114 (14%)
Query: 83 KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD 142
+LLP+ +++ +A GGYH+L +T+D ++ G G +G+LG T++Q + + L D
Sbjct: 3140 RLLPH--GPKVVDVAYGGYHTLVVTEDHRLLVCGTGKNGKLGLRDTRDQSSLVPVPGLRD 3197
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG------------VPGLPVVQ 184
V +ACG SAAVT G+LYMWG +LG VP LP VQ
Sbjct: 3198 --VLRVACGRRHSAAVTATGQLYMWGCNHHGRLGLGDQNDRYEPTLVPNLPPVQ 3249
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 24/193 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y++G + +GRLG+ P L P+K+ + V CG + LT+ GQL+
Sbjct: 3267 VYSFGCGD-QGRLGI-----PEAPHKLLRPAKLDFGRARMTRVICGCNSSAALTDTGQLY 3320
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG +Y LG G P + +L +I+ + G H +A+++ G VF WG
Sbjct: 3321 VWGTGRSYRLGTGSMTSHMLPIRVTDLASHKIVDASLGHEHGVAVSETGDVFVWGSNDSS 3380
Query: 122 QLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP-- 178
QLG + P++ L + + ++CG A +W +D+ VP
Sbjct: 3381 QLGGATADAAAPRPLLHPELRGKGLNRVSCGSRAVA---------VW---RDAANAVPEE 3428
Query: 179 ---GLPVVQPCPV 188
P +P PV
Sbjct: 3429 ERSDQPFTEPMPV 3441
Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 28/171 (16%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCG--GFFTMVLTE 56
LYTWGR GRLG G + ++ P V AL + +A V+CG T+ L+
Sbjct: 202 LYTWGRGS-YGRLGHG------TSDDVAFPQPVLALKSKDILIATVACGIGDAHTLALSR 254
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKL-------------LPNLVD-VRIIQIANGGYH 102
+G ++ +G + +Y G GG KL +P D ++ Q+ G
Sbjct: 255 DGVIYAFG-DGDYGWGPAPATGGASGKLGLGSTERTRVPVAIPCDFDGTKVKQVWCGRQI 313
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
S LT+ G +++WG G LG+ + V LAD + + G S
Sbjct: 314 SACLTEGGALYTWGNASGGALGNGESYG-AVESPARILADHVIKSVTAGPS 363
>gi|115485835|ref|NP_001068061.1| Os11g0545800 [Oryza sativa Japonica Group]
gi|113645283|dbj|BAF28424.1| Os11g0545800, partial [Oryza sativa Japonica Group]
Length = 400
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGG--WKPKLLPNL 88
P +V V VS G + +T +G+L+ WG NS+ +LG G R G P+ + L
Sbjct: 92 PIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCL 151
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH---------SFTQNQKVPMVIEA 139
D R+ +A G HS+A T++G+V SWG G G+LGH S T ++ P +I+
Sbjct: 152 ADARVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKN 211
Query: 140 LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
L + IA G SA + EKG L+++G + G G ++P VE
Sbjct: 212 LDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSG-DELRPTVVE 260
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 19/195 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+ WGR+ G+LGLG G +S P KV L V V+ G ++ TEEG+
Sbjct: 120 KLFAWGRNS-SGQLGLGKRAGKV----VSTPRKVDCLADARVKMVALGSEHSIATTEEGE 174
Query: 60 LWNWGANSNYELGRGDRVG---------GWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+ +WGA LG G + + P+L+ NL V+I +IA G HS + + G
Sbjct: 175 VLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKG 234
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+F +G G S ++ P V+E + F +ACGG + VT+ G LY WG+
Sbjct: 235 TLFIFGQKTEKGFGRS--GDELRPTVVEEVP--FSEEVACGGYHTCVVTDSGDLYSWGSN 290
Query: 171 KDSQLGVPGLPVVQP 185
++ LG+ G +V+
Sbjct: 291 ENGCLGLGGTDMVRS 305
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
LTE G+++ G N +LG G V + + D ++++++ G +HS A+T DGK+F
Sbjct: 63 LTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLF 122
Query: 114 SWGYGGHGQLGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
+WG GQLG + V P ++ LAD V +A G S A TE+G++ WG A
Sbjct: 123 AWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAG 182
Query: 172 DSQLG 176
+LG
Sbjct: 183 AGRLG 187
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 13/142 (9%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD 90
P+ V+ +P V+CGG+ T V+T+ G L++WG+N N LG G P++L + +
Sbjct: 256 PTVVEEVPFS-EEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLF 314
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGH------------GQLGHSFTQNQKVPMVIE 138
+ + G+ A+ G +++WG+GG GQLGH + PM++E
Sbjct: 315 KFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVE 374
Query: 139 ALADEFVTHIACGGSTSAAVTE 160
+ H++CG + + A+ E
Sbjct: 375 FGKNARAVHVSCGFNHTGAIFE 396
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 106 LTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
LT+ G+VF+ G GQLG + + + + DE V ++ G S AVT GKL+
Sbjct: 63 LTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLF 122
Query: 166 MWGNAKDSQLGV 177
WG QLG+
Sbjct: 123 AWGRNSSGQLGL 134
>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein, partial [Acanthamoeba castellanii
str. Neff]
Length = 872
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V V V+ G F++ +T +G++++WG N +LG G R P+L+P+L V I+
Sbjct: 187 VKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSVPQLVPHLQGVHIVSATC 246
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL---------ADEFVTHIA 149
G HS+ L+ G V+++G G GQLGH + +++ P +EAL A E + IA
Sbjct: 247 GQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEEGVESAGERIVQIA 306
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLG 176
CG + A+ G ++ WG+A+ Q G
Sbjct: 307 CGSHHTLALGVSGTVWTWGSAEYGQQG 333
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 90/229 (39%), Gaps = 58/229 (25%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WGR + EG+LG G + N P +V+ L V A CG + +T G+
Sbjct: 49 DVYVWGRAK-EGQLGNGERKAANALK----PVRVEGLRHERVVAGVCGYNHCLAVTVGGK 103
Query: 60 LWNWG---------ANSNY-------------------------------------ELGR 73
L+ WG AN Y EL R
Sbjct: 104 LYQWGMLHKHVEGSANKEYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSR 163
Query: 74 GDRVGGWKPKLLPN------LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF 127
G + P P+ L V+++++A G SLA+T G+V+SWG+ QLG
Sbjct: 164 VQNFGSFTPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGH 223
Query: 128 TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
NQ VP ++ L + CG S ++ G +Y +G QLG
Sbjct: 224 RYNQSVPQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLG 272
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 33/194 (17%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG +E + LG G N+ S+P V L V + + +CG +++L+ G
Sbjct: 207 EVYSWGFNE---KCQLGLGHRYNQ----SVPQLVPHLQGVHIVSATCGQQHSVLLSAAGH 259
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV---------RIIQIANGGYHSLALTDDG 110
++ +G +LG G P+ + LV RI+QIA G +H+LAL G
Sbjct: 260 VYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEEGVESAGERIVQIACGSHHTLALGVSG 319
Query: 111 KVFSWGYGGHGQLG---------------HSFTQNQKVPMVIEALAD-EFVTHIACGGST 154
V++WG +GQ G S P + D + + H++CG
Sbjct: 320 TVWTWGSAEYGQQGGTNAYEDWATGQRAEKSAAMICATPRSLSGCFDGKHIAHVSCGHLH 379
Query: 155 SAAVTEKGKLYMWG 168
+ A G +Y WG
Sbjct: 380 NLATARDGSVYSWG 393
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 28/156 (17%)
Query: 30 IPSKVKALPVP-----------VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG 78
P +V+AL VP + ++CG T+ L G +W WG+ + G +
Sbjct: 281 FPRRVEAL-VPAEEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNAYE 339
Query: 79 GW---------------KPKLLPNLVD-VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
W P+ L D I ++ G H+LA DG V+SWG+G +G
Sbjct: 340 DWATGQRAEKSAAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWGSYGV 399
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
LGH + Q VP +I + E + A G S AV
Sbjct: 400 LGHGNHRFQLVPKLIRRIGGERIVQTAAGAKHSLAV 435
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 70 ELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
ELG G D +P LL RI +A G HS+A+ + G V+ WG GQLG+
Sbjct: 7 ELGAGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQLGNGER 66
Query: 129 Q--NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+ N P+ +E L E V CG + AVT GKLY WG
Sbjct: 67 KAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWG 108
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 86/223 (38%), Gaps = 57/223 (25%)
Query: 10 GEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
G G++G LG GR EA + + + + +V+CG +M + E G ++ WG
Sbjct: 1 GTGKVGELGAGRDNKEALEPILLERFRG--KRIRSVACGEQHSMAVGETGDVYVWGRAKE 58
Query: 69 YELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG---------- 116
+LG G+R KP + L R++ G H LA+T GK++ WG
Sbjct: 59 GQLGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWGMLHKHVEGSA 118
Query: 117 -----------------------------YGGHGQLGH------------SFT-QNQKVP 134
Y G G SFT Q P
Sbjct: 119 NKEYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTPYTQPSP 178
Query: 135 MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V+ L V +A G S S AVT +G++Y WG + QLG+
Sbjct: 179 EVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGL 221
>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
of chromosome condensation (RCC1) domains and a PF|01363
FYVE Zinc finger domain [Arabidopsis thaliana]
gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1006
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 25/193 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL---PVPVAAVSCGGFFTMVLTEE 57
ELY WG D G ++G + K+ + + V +V+CG + T ++T
Sbjct: 364 ELYLWGIDGGT----------IEQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSS 413
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-------- 109
GQL+ +G+ + LG G KPK + +L +++I ++ G +H+ A+ +
Sbjct: 414 GQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYN 473
Query: 110 ----GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
GK+F+WG G G+LGH+ ++ + VP + L D ++CG + + A++ G +Y
Sbjct: 474 AKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVY 533
Query: 166 MWGNAKDSQLGVP 178
G++ QLG P
Sbjct: 534 TMGSSIHGQLGCP 546
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 20/190 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEE-- 57
+L+T+G G G+ G G E+ ++ P +V++L + V +VSCG + T + E
Sbjct: 415 QLFTYG----SGTFGV-LGHGSLES--VTKPKEVESLRRMKVISVSCGPWHTAAIVETAN 467
Query: 58 ----------GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+L+ WG LG D P + L+D I+++ G ++AL+
Sbjct: 468 DRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALS 527
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
G V++ G HGQLG +++ V +V+ L +FV IA G A +T G +Y W
Sbjct: 528 ISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTW 587
Query: 168 GNAKDSQLGV 177
G + QLG+
Sbjct: 588 GKGMNGQLGL 597
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 22/166 (13%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVA--------AVSCGGFFTM 52
+L+TWG D +GRLG SK K +P V VSCG T+
Sbjct: 479 KLFTWG-DGDKGRLG-------------HADSKRKLVPTCVTELIDHDFIKVSCGWTLTV 524
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
L+ G ++ G++ + +LG +L NL + IA+G +H LT G V
Sbjct: 525 ALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNV 584
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
++WG G +GQLG +++ P+++E L D V IACG + +AA+
Sbjct: 585 YTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAI 630
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 54/106 (50%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WGA + G ++ PKLL + + I+ G H+ +T G+VF WG G G+
Sbjct: 264 WGAITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGK 323
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
LG + P +E+L D V +AC + AVTE G+LY+WG
Sbjct: 324 LGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWG 369
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V ++S G ++T +G+++ WG ++ +LG + PK + +L DV + +A
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSD 353
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQ--NQKVPMVIEALADEFVTHIACGGSTSAAV 158
+ + A+T+ G+++ WG G G + S +Q +K+ V+ V +ACG +A V
Sbjct: 354 HQTCAVTESGELYLWGIDG-GTIEQSGSQFLTRKISDVLGGSLT--VLSVACGAWHTAIV 410
Query: 159 TEKGKLYMWGNAKDSQLGVPGL-PVVQPCPVE 189
T G+L+ +G+ LG L V +P VE
Sbjct: 411 TSSGQLFTYGSGTFGVLGHGSLESVTKPKEVE 442
>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 21 GPNEAGGLSIP------SKVKALPV----PVAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
G N+ G L IP S ++ + ++ V+CG F + L E G LW WG N + +
Sbjct: 320 GENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQ 379
Query: 71 LGRGDRVGGWKPKLLPNLVDVR---IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF 127
LG G+ P LL D+R ++++A G HS +T G++F G +GQLG
Sbjct: 380 LGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGAHL 439
Query: 128 TQNQ------KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
NQ V + + D H+ACG S +A VT+ G+++ WG K +LG
Sbjct: 440 NDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGRLG 494
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
++YTWG EG G LG G EA P V+AL + V+CG T+ L+++G
Sbjct: 208 DIYTWG----EGTNGMLGHGEDTQEAH----PHVVEALLGKDIRKVACGATHTLALSKDG 259
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS---LALTDDGKVFSW 115
++++WG+ LG+G + P + L + + Q+A +HS A + G +FS+
Sbjct: 260 EVFSWGSGYGGRLGQGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSF 319
Query: 116 GYGGHGQLGHSFTQNQKVPMVIE---ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
G +GQLG +++ + I+ +L++ ++ +ACG SAA+ E G L++WG +
Sbjct: 320 GENDYGQLG--IPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNES 377
Query: 173 SQLG 176
QLG
Sbjct: 378 GQLG 381
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 3/129 (2%)
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
V + ++ WG +N LG G+ P ++ L+ I ++A G H+LAL+ DG+V
Sbjct: 202 VKEDACDIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEV 261
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV---TEKGKLYMWGN 169
FSWG G G+LG +++ P+ I L +T +AC SAAV +++G L+ +G
Sbjct: 262 FSWGSGYGGRLGQGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSFGE 321
Query: 170 AKDSQLGVP 178
QLG+P
Sbjct: 322 NDYGQLGIP 330
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA----LPVPVAAVSCGGFFTMVLTEE 57
L+ WG +E G+LG G S+PS ++A V V+CG + +T++
Sbjct: 369 LWLWGCNES-GQLGNG------NYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKK 421
Query: 58 GQLWNWGANSNYELG------RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK 111
G+++ G N+ +LG + D V + D R + +A G H+ +TD G+
Sbjct: 422 GRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGE 481
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKG 162
+F+WG G G+LGH N+ +P IE + + V ++CG + +A +
Sbjct: 482 IFTWGRGKGGRLGHGDNLNRHLPTEIEIGMEGKHVRGVSCGRAHTACTVTRA 533
>gi|408681155|ref|YP_006880982.1| hypothetical protein SVEN_5437 [Streptomyces venezuelae ATCC 10712]
gi|328885484|emb|CCA58723.1| hypothetical protein SVEN_5437 [Streptomyces venezuelae ATCC 10712]
Length = 386
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 94/188 (50%), Gaps = 13/188 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+ WG D G+LG G AG P V++L V ++ G F + L E+G +
Sbjct: 138 RVLAWG-DNTYGQLGNG------TAGASPRPVAVQSLN-KVEDIAAGCFHAIALREDGTV 189
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG N +LG G P+ +P+L DV ++++ G +HSLA T DG V +WGY
Sbjct: 190 WTWGRNHYGQLGLGTTTDRNTPQRVPDLTDV--VEVSAGCHHSLARTADGTVKAWGYNAS 247
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLG+ T + P+ + LAD V+ I G S AV + G+L WG LG G
Sbjct: 248 GQLGNGSTAHASAPVDVAHLAD--VSRIFAAGYHSFAVLDDGQLRAWGWNSAGHLG-DGS 304
Query: 181 PVVQPCPV 188
V + PV
Sbjct: 305 TVSRTTPV 312
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++TWGR+ G+LGLG N P +V L V VS G ++ T +G +
Sbjct: 189 VWTWGRNH-YGQLGLGTTTDRN------TPQRVPDL-TDVVEVSAGCHHSLARTADGTVK 240
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N++ +LG G P + +L DV I A GYHS A+ DDG++ +WG+ G
Sbjct: 241 AWGYNASGQLGNGSTAHASAPVDVAHLADVSRIFAA--GYHSFAVLDDGQLRAWGWNSAG 298
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LG T ++ P+ + L D VT +A G + + AV G + WG QLG
Sbjct: 299 HLGDGSTVSRTTPVPVPGLTD--VTALAGGYNHTVAVLADGSVLAWGENTLGQLG 351
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S P V L V+ + G+ + + ++GQL WG NS LG G V P +P L
Sbjct: 259 SAPVDVAHL-ADVSRIFAAGYHSFAVLDDGQLRAWGWNSAGHLGDGSTVSRTTPVPVPGL 317
Query: 89 VDVRIIQIANGGY-HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMV 136
DV + GGY H++A+ DG V +WG GQLG T N P+
Sbjct: 318 TDVTALA---GGYNHTVAVLADGSVLAWGENTLGQLGDGTTTNSSTPVT 363
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 66/174 (37%), Gaps = 49/174 (28%)
Query: 50 FTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV------------------ 91
F + L +G + +WG N+ +LG G VG P + L V
Sbjct: 80 FAVALLNDGTVQSWGGNAAGQLGDGSTVGRSFPAAVTGLSGVSKTAAGVNSAYAVRGGRV 139
Query: 92 -----------------------------RIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
++ IA G +H++AL +DG V++WG +GQ
Sbjct: 140 LAWGDNTYGQLGNGTAGASPRPVAVQSLNKVEDIAAGCFHAIALREDGTVWTWGRNHYGQ 199
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LG T ++ P + L D V ++ G S A T G + WG QLG
Sbjct: 200 LGLGTTTDRNTPQRVPDLTD--VVEVSAGCHHSLARTADGTVKAWGYNASGQLG 251
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG-----YHSLALTDDGKVFSWGY 117
WG N +LG G + P + L + +A GG ++AL +DG V SWG
Sbjct: 36 WGGNGAGQLGNGTTLAQQTPAGVRGLNRADVRHLAAGGDSDTRSFAVALLNDGTVQSWGG 95
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG T + P + L+ V+ A G +++ AV G++ WG+ QLG
Sbjct: 96 NAAGQLGDGSTVGRSFPAAVTGLSG--VSKTAAGVNSAYAV-RGGRVLAWGDNTYGQLG- 151
Query: 178 PGLPVVQPCPV 188
G P PV
Sbjct: 152 NGTAGASPRPV 162
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-----STSAAVTEKGKLYM 166
V +WG G GQLG+ T Q+ P + L V H+A GG S + A+ G +
Sbjct: 33 VRAWGGNGAGQLGNGTTLAQQTPAGVRGLNRADVRHLAAGGDSDTRSFAVALLNDGTVQS 92
Query: 167 WGNAKDSQLG 176
WG QLG
Sbjct: 93 WGGNAAGQLG 102
>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
familiaris]
gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 1003
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 103/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG D EG++GL + +P +V + P++ +SCG + + +T EGQL
Sbjct: 160 ELFMWG-DNSEGQIGL------ENVTNVCVPQQV-TVGKPISWISCGYYHSAFVTTEGQL 211
Query: 61 WNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G +LG ++ V P+ +P + +++Q+A GG H++ LT+ V+++G G
Sbjct: 212 YTFGEPECGKLGLPNQLLVNHRMPQPVPG-IPGKVVQVACGGGHTVVLTEKA-VYTFGLG 269
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F VP IE + D+ ++ IACG + +A +T+ G +Y +G+ + +LG+
Sbjct: 270 QFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGL 329
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 67/194 (34%), Positives = 99/194 (51%), Gaps = 16/194 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G+
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGK 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII-QIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD L+ R I Q++ G S ALT+DG++F WG
Sbjct: 108 VYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + ++ I+CG SA VT +G+LY +G + +LG+P
Sbjct: 168 SEGQIGLENVTNVCVPQ--QVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLP 225
Query: 179 GLPVV-----QPCP 187
+V QP P
Sbjct: 226 NQLLVNHRMPQPVP 239
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+IPSK +SCG T V+T +L+ +G+N+ +LG G + KP + L
Sbjct: 25 NIPSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKAL 84
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTH 147
++ A G H+L T+ GKV++ G GQLG T+ + +I + +
Sbjct: 85 KPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQ 144
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
++ G +TSAA+TE G+L+MWG+ + Q+G+
Sbjct: 145 LSAGSNTSAALTEDGELFMWGDNSEGQIGL 174
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEA-GGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LYT+G E G+LGL PN+ +P V +P V V+CGG T+VLTE+
Sbjct: 210 QLYTFGEPEC-GKLGL-----PNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKA- 262
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ +G +LG G + PK + ++ D +I IA G H+ +TD G ++++G G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Query: 119 GHGQLGHSF--TQNQKVPMVIEALADEFVTHIACGG 152
HG+LG + NQ +P + V ++CGG
Sbjct: 323 RHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGG 358
>gi|260798953|ref|XP_002594464.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
gi|229279698|gb|EEN50475.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
Length = 1711
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEG 58
+YTWG+ +GRLG G G + G P +V+ L V V AV+CG T+ L + G
Sbjct: 885 VYTWGKPH-QGRLGHGQLLGDS---GYVPPMRVETLSIQRVQVMAVACGQEHTLALCDNG 940
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG+++ +LG GD P L+ L DV + +A G YHS AL +G+V+ WG+G
Sbjct: 941 -VYAWGSSTYGQLGLGDWDRQTHPTLVTQLKDVFCVAVATGQYHSAALDGEGRVWMWGWG 999
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
HGQLG +N P ++ A+ + ++ G + +A +T G+++ +G QLG
Sbjct: 1000 VHGQLGQGNAENLNKPHLVAAVQN--AVQVSTGYAHTAVLTRSGEVFTFGCGLHGQLG 1055
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 9/161 (5%)
Query: 21 GPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG-- 78
GP AG +P K K A VSCG +LTEEG ++ WG LG G +G
Sbjct: 849 GPETAG--EVPVKRKPPLSQAAVVSCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGDS 905
Query: 79 GWKPKLLPNLVDVRIIQ---IANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G+ P + + ++ +Q +A G H+LAL D+G V++WG +GQLG Q P
Sbjct: 906 GYVPPMRVETLSIQRVQVMAVACGQEHTLALCDNG-VYAWGSSTYGQLGLGDWDRQTHPT 964
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
++ L D F +A G SAA+ +G+++MWG QLG
Sbjct: 965 LVTQLKDVFCVAVATGQYHSAALDGEGRVWMWGWGVHGQLG 1005
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 11/168 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y WG G+LGLG + + P+ V L V AV+ G + + L EG++
Sbjct: 941 VYAWG-SSTYGQLGLG------DWDRQTHPTLVTQLKDVFCVAVATGQYHSAALDGEGRV 993
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + +LG+G+ KP L+ + + +Q++ G H+ LT G+VF++G G H
Sbjct: 994 WMWGWGVHGQLGQGNAENLNKPHLVAAVQNA--VQVSTGYAHTAVLTRSGEVFTFGCGLH 1051
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GQLGH T +P ++ + + V +ACG + VT ++Y +G
Sbjct: 1052 GQLGHGATDKVSIPQRVQGIMGK-VAQVACGLFHTVVVTSSQQVYTFG 1098
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 47/169 (27%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++T+G GL G +SIP +V+ + VA V+CG F T+V+T Q+
Sbjct: 1042 EVFTFG-------CGLHGQLGHGATDKVSIPQRVQGIMGKVAQVACGLFHTVVVTSSQQV 1094
Query: 61 WNWG------------------ANSNYELGRGDRVGG-----WKPKLLPNLVDVRIIQIA 97
+ +G A+++Y G +KP + V+ RI Q+
Sbjct: 1095 YTFGRHPQVWKQYLQNSRRQARASTSYTQSPAKHAMGLSGELFKPLWVQCRVEGRIRQVV 1154
Query: 98 NGGYHSLALTDD-----------------GKVFSWGYGGHGQLGHSFTQ 129
G H++ LT GKV+ WG HGQLG Q
Sbjct: 1155 AGAVHNMLLTSSVVAIAAGEDFSVAVDRSGKVWVWGRNSHGQLGIDMKQ 1203
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 49 FFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
FF VL + N+ + + E G + G K P L ++ G H LT+
Sbjct: 829 FFFYVLI----VINYRRDHHCEHGGPETAGEVPVKRKPPLSQAAVVSC--GQQHVALLTE 882
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQK---VPMVIEALADEF--VTHIACGGSTSAAVTEKGK 163
+G V++WG G+LGH PM +E L+ + V +ACG + A+ + G
Sbjct: 883 EG-VYTWGKPHQGRLGHGQLLGDSGYVPPMRVETLSIQRVQVMAVACGQEHTLALCDNG- 940
Query: 164 LYMWGNAKDSQLGV 177
+Y WG++ QLG+
Sbjct: 941 VYAWGSSTYGQLGL 954
>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 1466
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++P V L V AVS G + ++ L +G +W WGAN +LG G +P + L
Sbjct: 1156 AVPLTVYGL-ASVVAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTRPVQVAGL 1214
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
DV + I +GGYH+LA+ DG V++WGY GQLG +++ +P +E L E V +
Sbjct: 1215 GDV--VAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEGL--EGVVAV 1270
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A G S A+ G L WGN QLG
Sbjct: 1271 AGGDHYSLALHSDGTLSAWGNNASGQLG 1298
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 20/179 (11%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP----VAAVSCGGFFTMVLTEE 57
++ WGR+ G+LG G + + + + VP V AV+ GG + L +
Sbjct: 480 VWAWGRNA-AGQLGDG-----------TTLDRARPVAVPGLTSVTAVAAGGSHVLALRSD 527
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +W WG N+ +LG G V P + L V + +A G Y S+AL DG V++WG
Sbjct: 528 GSVWAWGYNALGQLGDGTTVDRLTPVRVSGLGAV--VAVAAGSYFSMALQSDGTVWTWGE 585
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G GQLG + P+ +E LA+ +T +A G + + AV G ++ WG+ + QLG
Sbjct: 586 GFEGQLGDGGGVQRLSPVRVEGLAN--ITRVAAGSAHALAVRGDGTVWAWGDNGEGQLG 642
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 100/192 (52%), Gaps = 19/192 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQL 60
+ WG + G G+LG G + G +S+P VP V +V+ G ++ L +G +
Sbjct: 780 VMAWG-ENGSGQLG--DGTSTHRTGPVSVPG------VPCVRSVASGIQHSLALACDGTV 830
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVD-VR-IIQIANGGYHSLALTDDGKVFSWGYG 118
W WGAN+ +LG G P++ P LV+ +R ++ +A GG S+AL DG V+SWG
Sbjct: 831 WAWGANARGQLGDGTTT----PRVTPGLVEGLRGVVALAAGGDASVALRADGSVWSWGGN 886
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLG ++ +P +E L++ +A G + + AV E G L+ WG QLG
Sbjct: 887 ASGQLGDGTLTDRALPAHVEHLSNAVA--VAVGETHALAVGEDGALWAWGANGSGQLGDG 944
Query: 179 GL-PVVQPCPVE 189
G P + P V+
Sbjct: 945 GTAPSLTPVRVK 956
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD 90
P ++ AL V+ VS G ++ L +G +W WG NS+ +LG G P + L
Sbjct: 102 PVRLAALENIVSVVS-GDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAGLDS 160
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
V + +A G +HSLAL +DG V++WG HGQLG TQ P + L V +A
Sbjct: 161 V--VAVAAGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGL--NGVVALAA 216
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
G + AV E G + WG+ QLG G + PV+
Sbjct: 217 GFDFTLAVLEDGTVRAWGSNGSGQLG-DGTSTQRLSPVK 254
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V +V+ ++ + +G +W WG N+ +LG G + +P +P L V +A GG
Sbjct: 461 VRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLTSV--TAVAAGG 518
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
H LAL DG V++WGY GQLG T ++ P+ + L V +A G S A+
Sbjct: 519 SHVLALRSDGSVWAWGYNALGQLGDGTTVDRLTPVRVSGLG--AVVAVAAGSYFSMALQS 576
Query: 161 KGKLYMWGNAKDSQLGV-PGLPVVQPCPVE 189
G ++ WG + QLG G+ + P VE
Sbjct: 577 DGTVWTWGEGFEGQLGDGGGVQRLSPVRVE 606
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 2 LYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
++ WG + G+LG G PG P + GL+ V A++ G FT+ + E+G
Sbjct: 180 VWAWGTNF-HGQLGRGHTQPGLTPEQVPGLN----------GVVALAAGFDFTLAVLEDG 228
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG+N + +LG G P + L I ++ G YH+LAL DG V++WG
Sbjct: 229 TVRAWGSNGSGQLGDGTSTQRLSPVKVSELSG--ITEVRAGTYHALALGKDGGVWTWGSN 286
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG ++ VPM + L E V +A S S A+ + G ++ WG QLG
Sbjct: 287 ASGQLGDGTWNDRAVPMQVPGL--ERVKAVASMDSDSLALLDTGAVFAWGANGSGQLG 342
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V A++ GG ++ L +G +W+WG N++ +LG G P + +L + + +A G
Sbjct: 861 VVALAAGGDASVALRADGSVWSWGGNASGQLGDGTLTDRALPAHVEHLSNA--VAVAVGE 918
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
H+LA+ +DG +++WG G GQLG T P+ ++ L E V +A G + S AV +
Sbjct: 919 THALAVGEDGALWAWGANGSGQLGDGGTAPSLTPVRVKGL--ERVASVAAGRAFSVAVRD 976
Query: 161 KGKLYMWGNAKDSQLG 176
G + WG QLG
Sbjct: 977 DGTAWAWGTNPSGQLG 992
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L WG + G+LGLG AG ++P +V+ + V +S G T+++ +G +
Sbjct: 730 LRGWGYNR-FGQLGLG------AAGWSAVPVQVRGIG-RVDRLSVGRAHTLMVRADGTVM 781
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N + +LG G P +P + VR +A+G HSLAL DG V++WG G
Sbjct: 782 AWGENGSGQLGDGTSTHRTGPVSVPGVPCVR--SVASGIQHSLALACDGTVWAWGANARG 839
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG T + P ++E L V +A GG S A+ G ++ WG QLG
Sbjct: 840 QLGDGTTTPRVTPGLVEGL--RGVVALAAGGDASVALRADGSVWSWGGNASGQLG 892
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD 90
P KV L + V G + + L ++G +W WG+N++ +LG G W + +P V
Sbjct: 252 PVKVSELS-GITEVRAGTYHALALGKDGGVWTWGSNASGQLGDGT----WNDRAVPMQVP 306
Query: 91 --VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
R+ +A+ SLAL D G VF+WG G GQLG T ++ P + L V +
Sbjct: 307 GLERVKAVASMDSDSLALLDTGAVFAWGANGSGQLGDGDTTDRATPGPVPGL--NAVASV 364
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPV-VQPCPV 188
G + + + G L+ WG QLG G V P PV
Sbjct: 365 VGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSERHVVPAPV 405
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++P+ V+ L VA V+ G + + E+G LW WGAN + +LG G G P L P
Sbjct: 900 ALPAHVEHLSNAVA-VAVGETHALAVGEDGALWAWGANGSGQLGDG----GTAPSLTPVR 954
Query: 89 VD--VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVT 146
V R+ +A G S+A+ DDG ++WG GQLG + VP + +L + +
Sbjct: 955 VKGLERVASVAAGRAFSVAVRDDGTAWAWGTNPSGQLGDGTNHARSVPNQVTSL--KGIR 1012
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
++ G A++ G ++ WG+ QLG
Sbjct: 1013 AMSAGAHHVVALSADGTVWTWGDNTLGQLG 1042
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 86/175 (49%), Gaps = 12/175 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++TWG + G+LG G N+ ++P +V L V AV+ ++ L + G ++
Sbjct: 280 VWTWGSNA-SGQLGDGT---WND---RAVPMQVPGLE-RVKAVASMDSDSLALLDTGAVF 331
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WGAN + +LG GD P +P L V + G H+L L DG +++WG G G
Sbjct: 332 AWGANGSGQLGDGDTTDRATPGPVPGLNAV--ASVVGGAQHALVLRKDGTLWAWGGGLSG 389
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLGH ++ VP + LA VT +A G S A G ++ WG QLG
Sbjct: 390 QLGHGGSERHVVPAPVMRLAG--VTSMATGSFHSLAALGDGSVWAWGRNTYGQLG 442
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 20/179 (11%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP----VAAVSCGGFFTMVLTEE 57
++ WG + G G+LG G + PVP VA+V G +VL ++
Sbjct: 330 VFAWGAN-GSGQLGDG-----------DTTDRATPGPVPGLNAVASVVGGAQHALVLRKD 377
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G LW WG + +LG G P + L V +A G +HSLA DG V++WG
Sbjct: 378 GTLWAWGGGLSGQLGHGGSERHVVPAPVMRLAGV--TSMATGSFHSLAALGDGSVWAWGR 435
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG T + + +E L V +A S AV G ++ WG QLG
Sbjct: 436 NTYGQLGDGSTAERHAAVRVEGLGG--VRSVASAAHHSLAVGMDGTVWAWGRNAAGQLG 492
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 32/201 (15%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP----VAAVSCGGFFTMVLTEE 57
++ WG D GEG+LG G S + + + VP + AVS G +M L +
Sbjct: 630 VWAWG-DNGEGQLGDG-----------SWADRFRPVQVPGLQGITAVSGGRSHSMALQGD 677
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G + WG N +LG G +P L+P L ++ + ++ H LAL DG + WGY
Sbjct: 678 GTVRAWGYNGYGQLGDGTLTSRVRPALIPGLTGIQALHPSH--LHVLALHADGTLRGWGY 735
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG- 176
GQLG VP+ + + V ++ G + + V G + WG QLG
Sbjct: 736 NRFGQLGLGAAGWSAVPVQVRGIGR--VDRLSVGRAHTLMVRADGTVMAWGENGSGQLGD 793
Query: 177 -----------VPGLPVVQPC 186
VPG+P V+
Sbjct: 794 GTSTHRTGPVSVPGVPCVRSV 814
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 46 CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGGYHS 103
G T+ L +G +W WG N+ +LG G + P+ +PNL V + G H+
Sbjct: 1322 AGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLSSVS--AVGAGARHT 1379
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
A+ G V++WG HGQLG N+ P+ + L+D VT ++ G S A+ G
Sbjct: 1380 FAVALKGTVWTWGRNSHGQLGLGDNTNRTEPLRVRELSD--VTVVSGGADFSLAMKRDGT 1437
Query: 164 LYMWGNAKDSQLGV 177
+ WG++ LG+
Sbjct: 1438 VLSWGSSLYGSLGL 1451
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 2 LYTWGRDEG-EGRLGLGPGRGPNEAGGLS--IPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
++TWG EG EG+LG + GG+ P +V+ L + V+ G + + +G
Sbjct: 580 VWTWG--EGFEGQLG--------DGGGVQRLSPVRVEGL-ANITRVAAGSAHALAVRGDG 628
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W WG N +LG G ++P +P L I ++ G HS+AL DG V +WGY
Sbjct: 629 TVWAWGDNGEGQLGDGSWADRFRPVQVPGLQG--ITAVSGGRSHSMALQGDGTVRAWGYN 686
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G+GQLG ++ P +I L H + A+ G L WG + QLG+
Sbjct: 687 GYGQLGDGTLTSRVRPALIPGLTGIQALHPSH--LHVLALHADGTLRGWGYNRFGQLGL 743
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++TWG + G+LG G A S+P++V+ L V AV+ G +++ L +G L
Sbjct: 1235 SVWTWGYNA-FGQLGDG------TAESRSLPTRVEGLE-GVVAVAGGDHYSLALHSDGTL 1286
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N++ +L GD G + + ++ + G H++AL DG V++WG
Sbjct: 1287 SAWGNNASGQL--GDGTGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAF 1344
Query: 121 GQLGH--SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG S T+ + VP + L+ V+ + G + AV KG ++ WG QLG+
Sbjct: 1345 GQLGDGASGTRMRLVPRPVPNLSS--VSAVGAGARHTFAVALKGTVWTWGRNSHGQLGL 1401
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVR 92
V A P+ +AA G ++ L+ G +W WG N + +LG + + G P L L +
Sbjct: 56 VTAPPMRIAA---GTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRLAALEN-- 110
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
I+ + +G HSLAL DG V++WG GQLG T ++ PM + L + V +A G
Sbjct: 111 IVSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAGL--DSVVAVAAGD 168
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
S A+ E G ++ WG QLG
Sbjct: 169 FHSLALREDGTVWAWGTNFHGQLG 192
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP----VAAVSCGGFFTMVLTEE 57
++TWG D G+LG G A G + ++ PVP V+AV G T + +
Sbjct: 1336 VWTWG-DNAFGQLGDG-------ASGTRM--RLVPRPVPNLSSVSAVGAGARHTFAVALK 1385
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +W WG NS+ +LG GD +P + L DV + ++ G SLA+ DG V SWG
Sbjct: 1386 GTVWTWGRNSHGQLGLGDNTNRTEPLRVRELSDVTV--VSGGADFSLAMKRDGTVLSWGS 1443
Query: 118 GGHGQLGHSFTQNQKVP 134
+G LG T ++ P
Sbjct: 1444 SLYGSLGLGATGHRSSP 1460
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 19 GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR-- 76
G G N A S+P++V +L + A+S G + L+ +G +W WG N+ +LG G
Sbjct: 992 GDGTNHA--RSVPNQVTSLK-GIRAMSAGAHHVVALSADGTVWTWGDNTLGQLGDGSSSP 1048
Query: 77 VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMV 136
G W P+ +P L V +A G ++A+ DG +WG +GQLG T Q PM
Sbjct: 1049 TGMW-PRQVPELRGVE--AVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMA 1105
Query: 137 IEALADEF---VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
++ + V + G + G + WG+ QLG
Sbjct: 1106 VKIEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLG 1148
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 85/199 (42%), Gaps = 29/199 (14%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP----VAAVSCGGFFTMVLTEE 57
++TWG D G+LG G S P+ + VP V AV+ G FT+ + +
Sbjct: 1030 VWTWG-DNTLGQLGDGS----------SSPTGMWPRQVPELRGVEAVAAGEQFTVAVLLD 1078
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-------IIQIANGGYHSLALTDDG 110
G WG+N +LG G P+L P V + + + G H++ DG
Sbjct: 1079 GTARAWGSNEYGQLGDGKT----GPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMSDG 1134
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
V +WG GQLG T + VP+ + LA V ++ G S A+ G ++ WG
Sbjct: 1135 TVQTWGDNTFGQLGDGTTTRRAVPLTVYGLAS--VVAVSSGAWHSLALLSDGTVWAWGAN 1192
Query: 171 KDSQLGV-PGLPVVQPCPV 188
QLG P +P V
Sbjct: 1193 GFGQLGDGTSTPRTRPVQV 1211
>gi|307109803|gb|EFN58040.1| hypothetical protein CHLNCDRAFT_20586, partial [Chlorella
variabilis]
Length = 274
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 9/180 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+YTWG ++ +G+LG G G N+ P +++ L V A+SCG T+ +T E
Sbjct: 101 EVYTWGLND-KGQLGSATGPGENK----DAPKRMELLVGWNVKAISCGAEHTIAITPEDV 155
Query: 60 LWNWGANSNYELGRGDRV-GGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+ WG+N + G GD+ W KP+ + L + + Q+ G YH+L +T +V++WG
Sbjct: 156 I-TWGSNEYGQCGHGDKAETDWVKPRSIKMLHEQMVTQVICGRYHTLCVTATSQVYAWGR 214
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG T +++ P ++E L V +A G + S A+T G L+ WG + QLG+
Sbjct: 215 NSSGQLGLGDTADRRGPTLVEGLWALPVQQLAAGEAHSVALTSNGFLFTWGGNEHGQLGL 274
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Query: 42 AAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANG 99
AA+S G +T +G+++ WG N +LG G K PK + LV + I+ G
Sbjct: 84 AALSMGSSHAAGVTGQGEVYTWGLNDKGQLGSATGPGENKDAPKRMELLVGWNVKAISCG 143
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK--VPMVIEALADEFVTHIACGGSTSAA 157
H++A+T + V +WG +GQ GH P I+ L ++ VT + CG +
Sbjct: 144 AEHTIAITPE-DVITWGSNEYGQCGHGDKAETDWVKPRSIKMLHEQMVTQVICGRYHTLC 202
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
VT ++Y WG QLG+
Sbjct: 203 VTATSQVYAWGRNSSGQLGL 222
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 64 GANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL 123
G NSN +LG GD +P+ L V R ++ G H+ +T G+V++WG GQL
Sbjct: 56 GCNSNGQLGVGDTADVAEPQSLK--VARRWAALSMGSSHAAGVTGQGEVYTWGLNDKGQL 113
Query: 124 GHSF--TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +N+ P +E L V I+CG + A+T + + WG+ + Q G
Sbjct: 114 GSATGPGENKDAPKRMELLVGWNVKAISCGAEHTIAITPE-DVITWGSNEYGQCG 167
>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 962
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 12/189 (6%)
Query: 1 ELYTWGR-DEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LY WG D G LGLG G + + I +++ + V +SCG + T +T G+
Sbjct: 376 DLYAWGDGDHNAGLLGLG--SGASHWKPVRILGQMEG--INVRTISCGPWHTAFVTSAGK 431
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL-------TDDGKV 112
L+ +G + LG GDR+ P+ + L R I+ A G +HS A+ + GK+
Sbjct: 432 LFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIRTACGVWHSAAVVSVFGEASSSGKL 491
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
F+WG G G+LGH ++ +P+ + L +ACG S + A++ G++Y G A
Sbjct: 492 FTWGDGDDGKLGHGDIASRLIPLSVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADP 551
Query: 173 SQLGVPGLP 181
SQ V P
Sbjct: 552 SQDDVVRAP 560
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 66/242 (27%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS---IPSKVKA-LPVPVAAVSCGGFFTMVLTE 56
+++ WG G+G LG G + + + ++ +P +K+ + + ++SCG + +++T+
Sbjct: 262 DVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTK 321
Query: 57 EGQLWNWGANSN--------------------------------------------YELG 72
+GQL++WG S Y G
Sbjct: 322 QGQLYSWGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWG 381
Query: 73 RGDRVGG----------WKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
GD G WKP ++L + + + I+ G +H+ +T GK+F++G G G
Sbjct: 382 DGDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFTFGDGTFG 441
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV-------TEKGKLYMWGNAKDSQ 174
LGH + +P +EAL ACG SAAV + GKL+ WG+ D +
Sbjct: 442 ALGHGDRISTNIPREVEALNGCRTIRTACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGK 501
Query: 175 LG 176
LG
Sbjct: 502 LG 503
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L+TWG D +G+LG G + IP V L V+CG T+ L+ GQ
Sbjct: 490 KLFTWG-DGDDGKLGHG------DIASRLIPLSVTELDTTSFQQVACGQSITVALSMSGQ 542
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA-LTDDGKVFSWGYG 118
++ G + + D V P + + +Q GYH +A L +V++WG G
Sbjct: 543 VYAMGTA---DPSQDDVVRA--PSCIEGGLGKSFVQEVACGYHHIAVLNSKAEVYTWGKG 597
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
+GQLGH T+ +++P +++AL + V + CG + +A +
Sbjct: 598 SNGQLGHGDTEYRRMPTLVKALKGKQVRKVVCGSNYTATI 637
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK+L + V + I+ G +++ +T G+++SWG G+LGH P +I+
Sbjct: 295 PKVLKSHVALDAQSISCGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPHPKLIDEFD 354
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
V CG + AVT G LY WG+ D G+ GL
Sbjct: 355 GSTVELADCGEFHTCAVTTSGDLYAWGDG-DHNAGLLGL 392
>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
Length = 560
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 95/196 (48%), Gaps = 28/196 (14%)
Query: 1 ELYTWG---RDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
+LYTWG RD G+LG G + P VK + SCGG+ M L ++
Sbjct: 169 DLYTWGGGGRDYNRGQLGHG------HLNDVETPQIVKD---NIVKFSCGGYHMMALDKD 219
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPK----------------LLPNLVDVRIIQIANGGY 101
G+LW+WG+ E G+G+ PK + N + I +I+ GG+
Sbjct: 220 GELWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGH 279
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
HSL L++ G V++ GY HGQLG T+NQ ++ ++ + + IA G + S +T
Sbjct: 280 HSLLLSNKGIVYACGYAQHGQLGIKATENQNKFQLVIGISGKTIVQIAAGWNHSIVLTSH 339
Query: 162 GKLYMWGNAKDSQLGV 177
+Y G+ + QLGV
Sbjct: 340 SDVYTCGHNQAGQLGV 355
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 15/170 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
L+ WGR++ +G L +G + N P V+ L V +S G + ++T++GQL
Sbjct: 17 LFAWGRNK-DGELSIGNQKKCNA------PKAVQGLKNQTVQLISSGSNHSGIVTQDGQL 69
Query: 61 WNWGANSNYELGRGDRVGGWKPKLL--PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ G+ + +LG D PK L + + + Q+A G YH+L L D+G+V++WG
Sbjct: 70 FICGSALHGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAWGGT 129
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
H +LG + P IE L + + I CG SAA++ G LY WG
Sbjct: 130 LHKKLGSKAGK----PARIETLK-QTIVQIGCGDFHSAALSANGDLYTWG 174
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 29/196 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG G LG G P++++ L + + CG F + L+ G L
Sbjct: 122 QVYAWG---GTLHKKLGSKAGK--------PARIETLKQTIVQIGCGDFHSAALSANGDL 170
Query: 61 WNW-GANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ W G +Y G+ G P +V I++ + GGYH +AL DG+++SWG G
Sbjct: 171 YTWGGGGRDYNRGQLGH-GHLNDVETPQIVKDNIVKFSCGGYHMMALDKDGELWSWGSGM 229
Query: 120 HGQLGHSFTQNQKVPMVIE--------ALADEFVTH--------IACGGSTSAAVTEKGK 163
+G+ G Q+ +P ++ + D FV + I+ GG S ++ KG
Sbjct: 230 YGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLLSNKGI 289
Query: 164 LYMWGNAKDSQLGVPG 179
+Y G A+ QLG+
Sbjct: 290 VYACGYAQHGQLGIKA 305
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 16/163 (9%)
Query: 11 EGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
G+LG P+ L + + +K L V V+ G + T+ L + GQ++ WG + +
Sbjct: 77 HGKLGFEDANQPSYPKFLLVQA-MKGLFV--TQVATGDYHTLCLLDNGQVYAWGGTLHKK 133
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG----HGQLGHS 126
LG + G KP + L I+QI G +HS AL+ +G +++WG GG GQLGH
Sbjct: 134 LG--SKAG--KPARIETLKQT-IVQIGCGDFHSAALSANGDLYTWGGGGRDYNRGQLGHG 188
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ + P +++ + + +CGG A+ + G+L+ WG+
Sbjct: 189 HLNDVETPQIVK----DNIVKFSCGGYHMMALDKDGELWSWGS 227
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG N + EL G++ PK + L + + I++G HS +T DG++F G
Sbjct: 17 LFAWGRNKDGELSIGNQKKCNAPKAVQGLKNQTVQLISSGSNHSGIVTQDGQLFICGSAL 76
Query: 120 HGQLGHSFTQNQKVP--MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
HG+LG P ++++A+ FVT +A G + + + G++Y WG +LG
Sbjct: 77 HGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAWGGTLHKKLG 135
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
+ +S GG +++L+ +G ++ G + +LG K +L+ + I+QIA G
Sbjct: 271 IKEISLGGHHSLLLSNKGIVYACGYAQHGQLGIKATENQNKFQLVIGISGKTIVQIAAGW 330
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
HS+ LT V++ G+ GQLG +++ I L + + GG+ S A+ +
Sbjct: 331 NHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRINFLEQRRIKQLFAGGNHSWALID 390
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D I+ +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIVHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
H+LAL+D G++FSWG G GQLG T++ VP VI+ L + + ++CG S A+
Sbjct: 94 SHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 96/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + ++ L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----AVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG + L++ GQ
Sbjct: 54 EVYTCGLN-TKGQLGHEREGNKPEQIGALADQH--------IVHVACGESHNLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+++ L I+Q++ G +HSLAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDAVA--VPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S + A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLGL 118
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEEDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA 149
GQLG T N K P ++ A AD F HI
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIV 364
>gi|115609688|ref|XP_784766.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Strongylocentrotus purpuratus]
Length = 1035
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 87/163 (53%), Gaps = 17/163 (10%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELG------RGDR----VGGWKPKLLPNL 88
V + +V CG + L+ +G++++WG N +LG R D + P+L+ L
Sbjct: 75 VDIVSVCCGRHHFLALSADGRVYSWGRNDVGQLGIRKKKQRYDNQSQITQDFTPRLIEEL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-------HSFTQNQKVPMVIEALA 141
+ +IQIA G HS+ALT DG++FSWG HGQLG + + P+ IE L
Sbjct: 135 SNYDVIQIACGDVHSIALTLDGRLFSWGCNRHGQLGVETKWAAKEAKDHAEKPIEIEGLW 194
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQ 184
V HIA GG+ S A++ G +++WG+ QLG+ L V+
Sbjct: 195 GIPVQHIAAGGAHSVALSTTGSIFVWGSNTHGQLGLQKLDDVK 237
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 13/183 (7%)
Query: 2 LYTWGRDEGEGRLGL--GPGRGPNEAGGLS--IPSKVKALP-VPVAAVSCGGFFTMVLTE 56
+Y+WGR++ G+LG+ R N++ P ++ L V ++CG ++ LT
Sbjct: 96 VYSWGRNDV-GQLGIRKKKQRYDNQSQITQDFTPRLIEELSNYDVIQIACGDVHSIALTL 154
Query: 57 EGQLWNWGANSNYELG-------RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD 109
+G+L++WG N + +LG + + KP + L + + IA GG HS+AL+
Sbjct: 155 DGRLFSWGCNRHGQLGVETKWAAKEAKDHAEKPIEIEGLWGIPVQHIAAGGAHSVALSTT 214
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G +F WG HGQLG + K+P+ + +L+ V ++CG ++ + + G+L ++G
Sbjct: 215 GSIFVWGSNTHGQLGLQKLDDVKLPVKLCSLSQGNVNVVSCGMHHTSFLKQNGQLLVYGM 274
Query: 170 AKD 172
D
Sbjct: 275 GLD 277
>gi|412985305|emb|CCO20330.1| predicted protein [Bathycoccus prasinos]
Length = 534
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 19/157 (12%)
Query: 28 LSIPSKVKALPVPVAA--VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGG-----W 80
++IP K+ + A V+CGG + +T +G +++WG VGG +
Sbjct: 256 ITIPLDWKSPKTLIKAKRVACGGMSSFAVTVDGDVYSWGCP----------VGGVGPNTY 305
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
PK + NL D +IA G +H LAL DG V+SWG+G +GQLGH T N+ P IE L
Sbjct: 306 HPKKVENLRDC--CEIAAGSFHVLALAKDGTVYSWGHGEYGQLGHQKTGNEATPRAIETL 363
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ V I GG SA +T G+L WG + ++LG+
Sbjct: 364 NRKGVVKIRAGGWHSACITAGGQLLTWGRGEYARLGM 400
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 40/216 (18%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y+WG G G GPN P KV+ L ++ G F + L ++G +
Sbjct: 289 DVYSWGCPVG--------GVGPNTYH----PKKVENLR-DCCEIAAGSFHVLALAKDGTV 335
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG +LG P+ + L +++I GG+HS +T G++ +WG G +
Sbjct: 336 YSWGHGEYGQLGHQKTGNEATPRAIETLNRKGVVKIRAGGWHSACITAGGQLLTWGRGEY 395
Query: 121 GQLG--HSFTQNQKVPMVIE---------ALADEFVTH-------IACGGSTSAAVTEKG 162
+LG ++ P ++ DE H + GGS + A+T +G
Sbjct: 396 ARLGMGDDDCADKITPTEVKFPSPTDADDDDDDESKRHQRYKIVDASLGGSHTIALTSQG 455
Query: 163 KLYMWGNAKDSQL---------GVPGLPVVQPCPVE 189
+L WG +L G+PG P P E
Sbjct: 456 QLLSWGRNSLGRLGRVVNGPHSGIPGEVKFPPLPNE 491
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 61/139 (43%), Gaps = 36/139 (25%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP------------------VA 42
+L TWGR E RLG+G ++ P++VK P P +
Sbjct: 386 QLLTWGRGE-YARLGMGD----DDCADKITPTEVK-FPSPTDADDDDDDESKRHQRYKIV 439
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV---------GGWKPKLLPNLVDVRI 93
S GG T+ LT +GQL +WG NS LGR RV G K LPN
Sbjct: 440 DASLGGSHTIALTSQGQLLSWGRNS---LGRLGRVVNGPHSGIPGEVKFPPLPNERKWIC 496
Query: 94 IQIANGGYHSLALTDDGKV 112
++++ GG H++AL + K
Sbjct: 497 VKLSCGGRHNMALCVETKT 515
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3987 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4037
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4038 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4097
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4098 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4157
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4046 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4102
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4103 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4162
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4163 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4210
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4198 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4251
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4252 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4311
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4312 LGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4348
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4143 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4195
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4196 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4255
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4256 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4314
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 529 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 579
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 580 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 639
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 640 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 696
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 476 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 530
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 531 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 588
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 589 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 637
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3536 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 3586
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 3587 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3646
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 3647 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 3706
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 8/155 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 3736 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 3789
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 3790 FGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 3849
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
LG T + + P ++ L + V I+ G SAA
Sbjct: 3850 LGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 3884
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 371 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 416
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 417 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 476
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 477 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 536
Query: 171 KDSQLG 176
+LG
Sbjct: 537 DFGRLG 542
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 16/168 (9%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 3595 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3651
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 3652 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 3711
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P +ACG + + AV+ G + + +G+ +LG+
Sbjct: 3712 KKLP-----------ERVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 3748
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+T+G + GRLGLG + K LP VA CG T+ ++ +G +
Sbjct: 3692 KLFTFGNGD-YGRLGLGN-------------TSNKKLPERVA---CGLNHTLAVSADGSM 3734
Query: 61 -WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 3735 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 3794
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P + LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 3795 LIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 3852
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 632 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 683
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 684 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
Shintoku]
Length = 2619
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 27 GLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP-KLL 85
GLSI L + +++CG T+V T +G +++WG + LG G + P K++
Sbjct: 1120 GLSI-----GLRNAIVSIACGANHTLVTTVDGCVYSWGMGAYGVLGTGSVANRYNPVKVV 1174
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFV 145
++ I + G HS+AL +G V+SWGYGG+G+LG T+N P +I V
Sbjct: 1175 FPSDNIFISKCCAGSRHSMALDKEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDTYEV 1234
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL--PVVQPCPVE 189
I+CG S SA + G +Y WG + +LG+ + V++P VE
Sbjct: 1235 FQISCGDSHSACLDRFGTVYTWGCCRGGKLGLGKIVSDVLEPAVVE 1280
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y+WG G LG G + PS + ++ G +M L +EG +W
Sbjct: 1148 VYSWGMG-AYGVLGTGSVANRYNPVKVVFPSD----NIFISKCCAGSRHSMALDKEGNVW 1202
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG N LG G + P L+ + QI+ G HS L G V++WG G
Sbjct: 1203 SWGYGGNGRLGLGSTRNYYTPNLIRIFDTYEVFQISCGDSHSACLDRFGTVYTWGCCRGG 1262
Query: 122 QLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+LG + P V+E+L + IACG + A++ GK+Y WG
Sbjct: 1263 KLGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKIYQWG 1310
Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 54/179 (30%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
+++WG G GRLGLG R P+ ++ V +SCG + L G +
Sbjct: 1201 VWSWGYG-GNGRLGLGSTRN------YYTPNLIRIFDTYEVFQISCGDSHSACLDRFGTV 1253
Query: 61 WNWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG--Y 117
+ WG +LG G V +P ++ +L IIQIA G ++LAL+ GK++ WG
Sbjct: 1254 YTWGCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKIYQWGCTL 1313
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + Q + VP + + V IA G + AA+ G L WG +LG
Sbjct: 1314 GFNKQSEGLISNIDYVPQPVPDTGFKNV-FIAAGPYSCAAINIFGDLLTWGLGTGYRLG 1371
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 46/188 (24%)
Query: 32 SKVKALPVPV-------AAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKL 84
S + +P PV ++ G + + G L WG + Y LG GD PK
Sbjct: 1324 SNIDYVPQPVPDTGFKNVFIAAGPYSCAAINIFGDLLTWGLGTGYRLGHGDSKDHVAPKF 1383
Query: 85 LPNL-----VDV---------------------------RIIQIANGGYHSLALTDDGKV 112
+ +L +D RI QIA G H + LT +G V
Sbjct: 1384 VSHLRTRIYIDTLLKVYDETPMELQDNVKAGATNAHDEKRIQQIAVGDGHGVLLTCNGTV 1443
Query: 113 FSWGYGGHGQLGHSFTQNQ----KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
++WG + G++ T++Q PM+ + + ++ IACG + S A+T G L+ WG
Sbjct: 1444 YTWGV--NNGTGYNSTKDQIESYSEPMLFNHFSSK-ISKIACGSNHSLAITVNGLLFTWG 1500
Query: 169 NAKDSQLG 176
+ QLG
Sbjct: 1501 CNDNGQLG 1508
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 59/221 (26%), Positives = 85/221 (38%), Gaps = 60/221 (27%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
G+LGLG + P ++ + V ++ G ++VLT EG L++ GA + L
Sbjct: 1565 GKLGLGEAL----TSTVMTPREITTV-TGVYKLALGTMHSVVLTHEGSLYSAGAGTGGRL 1619
Query: 72 GRGD---------------------------------RVGGW----------KPKLLPNL 88
G GD + GW K L P L
Sbjct: 1620 GTGDTSNYFVFTPVKTEVKFVDVCAGSSHSLAISVDNELYGWGEGKYICSDEKHVLEPTL 1679
Query: 89 VDV--------RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT----QNQKVPMV 136
++V ++I G HSL LT+ G V ++G +GQLG + N + M
Sbjct: 1680 MEVIPSPTGEAKVISAVAAGNHSLVLTNSGYVAAFGNNTYGQLGVQLSIKSSANNFIKMP 1739
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
D VT IA S+ T KG Y WG + D +LGV
Sbjct: 1740 STVNLDANVTCIATSRYFSSCSTLKGDAYSWGLSSDDRLGV 1780
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 19/186 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+YTWG + G G ++ S P ++ ++CG ++ +T G L+
Sbjct: 1443 VYTWGVNNGTGY-----NSTKDQIESYSEPMLFNHFSSKISKIACGSNHSLAITVNGLLF 1497
Query: 62 NWGANSNYELGRGDRVGGWKPKLLP---NLVDVRIIQIANGG-----YHSLALTDD-GKV 112
WG N N +LG+GD P +P N ++V + N G H + DD G +
Sbjct: 1498 TWGCNDNGQLGQGDLRSRVIPDHVPYIENCINV-FAGVDNSGCICSSNHEDFMKDDYGTL 1556
Query: 113 FSWGYGGHGQ--LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+ +G G+ LG + T P I + V +A G S +T +G LY G
Sbjct: 1557 WVFGSSSCGKLGLGEALTSTVMTPREITTVTG--VYKLALGTMHSVVLTHEGSLYSAGAG 1614
Query: 171 KDSQLG 176
+LG
Sbjct: 1615 TGGRLG 1620
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGAN--SNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
+ ++ G ++LT G ++ WG N + Y + D++ + +L N +I +IA
Sbjct: 1424 IQQIAVGDGHGVLLTCNGTVYTWGVNNGTGYNSTK-DQIESYSEPMLFNHFSSKISKIAC 1482
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP 134
G HSLA+T +G +F+WG +GQLG +++ +P
Sbjct: 1483 GSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIP 1518
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
L+TWG ++ G+LG G R P+ + V A + + + G
Sbjct: 1496 LFTWGCND-NGQLGQGDLRSRVIPDHVPYIENCINVFAGVDNSGCICSSNHEDFMKDDYG 1554
Query: 59 QLWNWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
LW +G++S +LG G+ + P+ + + V ++A G HS+ LT +G ++S G
Sbjct: 1555 TLWVFGSSSCGKLGLGEALTSTVMTPREITTVTGV--YKLALGTMHSVVLTHEGSLYSAG 1612
Query: 117 YGGHGQLGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK--- 171
G G+LG T N V P+ E +FV + G S S A++ +LY WG K
Sbjct: 1613 AGTGGRLGTGDTSNYFVFTPVKTEV---KFVD-VCAGSSHSLAISVDNELYGWGEGKYIC 1668
Query: 172 --DSQLGVPGLPVVQPCP 187
+ + P L V P P
Sbjct: 1669 SDEKHVLEPTLMEVIPSP 1686
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 29/146 (19%)
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALT-------DDGK 111
+++WG LG+G V + PK++P +I Q+A G YHS L + G
Sbjct: 1015 VYSWGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAVLVSSSKQHPNAGT 1074
Query: 112 VFSWGYGGHGQLGHSFTQNQKV---------------------PMVIEALADEFVTHIAC 150
VF++G G G+LG+ N V P+ + + IAC
Sbjct: 1075 VFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAIVSIAC 1134
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + + T G +Y WG LG
Sbjct: 1135 GANHTLVTTVDGCVYSWGMGAYGVLG 1160
Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+YTWG G G+LGLG + P+ V++L + ++CG T+ L+ G++
Sbjct: 1253 VYTWGCCRG-GKLGLG-----KIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKI 1306
Query: 61 WNWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG + + + P+ +P+ + + IA G Y A+ G + +WG G
Sbjct: 1307 YQWGCTLGFNKQSEGLISNIDYVPQPVPD-TGFKNVFIAAGPYSCAAINIFGDLLTWGLG 1365
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+LGH +++ P +FV+H+
Sbjct: 1366 TGYRLGHGDSKDHVAP--------KFVSHL 1387
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 21/143 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP------VAAVSCGGFFTMVL 54
ELY WG EG+ + E P+ ++ +P P ++AV+ G ++VL
Sbjct: 1657 ELYGWG----EGKYICSDEKHVLE------PTLMEVIPSPTGEAKVISAVAAGNH-SLVL 1705
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKL--LPNLV--DVRIIQIANGGYHSLALTDDG 110
T G + +G N+ +LG + +P+ V D + IA Y S T G
Sbjct: 1706 TNSGYVAAFGNNTYGQLGVQLSIKSSANNFIKMPSTVNLDANVTCIATSRYFSSCSTLKG 1765
Query: 111 KVFSWGYGGHGQLGHSFTQNQKV 133
+SWG +LG FT N+ V
Sbjct: 1766 DAYSWGLSSDDRLGVGFTNNKVV 1788
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 529 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 579
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 580 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 639
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 640 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 696
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 476 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 530
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 531 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 588
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 589 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 637
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 4000 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4050
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4051 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4110
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4111 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4170
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 15/178 (8%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4059 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4115
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4116 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4175
Query: 131 QKVPMVIEALA----------DEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL F +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4176 KKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4233
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4221 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4274
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4275 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4334
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4335 LGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4371
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 371 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 416
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 417 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 476
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 477 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 536
Query: 171 KDSQLG 176
+LG
Sbjct: 537 DFGRLG 542
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-----------PVPVAAVSCGGF 49
+L+T+G + GRLGLG +P +V AL + V+CG
Sbjct: 4156 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLN 4208
Query: 50 FTMVLTEEGQL-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
T+ ++ +G + W +G +LG G+ P+ + L + I ++A G S+ALT
Sbjct: 4209 HTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 4268
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
DG V+++G L +N P I LA + +A G + A+ G +Y WG
Sbjct: 4269 DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4328
Query: 169 NAKDSQLGV 177
+ + QLG+
Sbjct: 4329 SNSEGQLGL 4337
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 632 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 683
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 684 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D II +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIIHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L+++GQ
Sbjct: 54 EVYTCGLN-TKGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDQGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGL 118
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA 149
GQLG T N K P ++ A AD F HI
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIV 364
>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1044
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 92/188 (48%), Gaps = 18/188 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+LYT+G D G LG G + G + P +V++L V V+CG + T + E
Sbjct: 389 QLYTYG-DGTFGVLGHG------DTQGTTRPKEVESLKGSRVKCVACGPWHTAAIVEVIS 441
Query: 57 -------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD 109
+L+ WG +LG D+ P + +L D IQ++ G ++AL+
Sbjct: 442 DFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGTALTVALSVT 501
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G VF+ G HGQLG+ + V V L EFV HI+ G S A VT GK++ WG
Sbjct: 502 GVVFTSGSSMHGQLGNPHADGKTVSAVEGLLKSEFVRHISSGSSHVAVVTTNGKVFTWGK 561
Query: 170 AKDSQLGV 177
K+ QLG+
Sbjct: 562 GKEGQLGL 569
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 80/150 (53%), Gaps = 10/150 (6%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
+ V ++CG + T ++T GQL+ +G + LG GD G +PK + +L R+ +A
Sbjct: 369 ISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESLKGSRVKCVAC 428
Query: 99 GGYHSLALTD----------DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
G +H+ A+ + K+F+WG G+LGH+ + + +P +++L D +
Sbjct: 429 GPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQV 488
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+CG + + A++ G ++ G++ QLG P
Sbjct: 489 SCGTALTVALSVTGVVFTSGSSMHGQLGNP 518
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 25/191 (13%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAG-GLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
E+Y+WG +E GR+G N+ +S P V++L + V V+ G T +T G
Sbjct: 284 EVYSWG-NESSGRIG-------NQVNIKVSRPKVVQSLASLHVKDVAYGSKHTCAVTVSG 335
Query: 59 QLWNWGANSNYELGRGDRVG--GWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
+L WG +G+ D W P KL L + +++IA G +H+ +T G+++++
Sbjct: 336 ELIEWGEGP--YMGQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTY 393
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE----------KGKLY 165
G G G LGH TQ P +E+L V +ACG +AA+ E + KL+
Sbjct: 394 GDGTFGVLGHGDTQGTTRPKEVESLKGSRVKCVACGPWHTAAIVEVISDFKSNSPRSKLF 453
Query: 166 MWGNAKDSQLG 176
WG+A +LG
Sbjct: 454 TWGDADRGKLG 464
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 78/141 (55%), Gaps = 6/141 (4%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V +++CG ++T++G++++WG S+ +G + +PK++ +L + + +A G
Sbjct: 266 VQSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVVQSLASLHVKDVAYGS 325
Query: 101 YHSLALTDDGKVFSWGYGGH-GQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAV 158
H+ A+T G++ WG G + GQL S+ +NQ P + + D V IACG +A +
Sbjct: 326 KHTCAVTVSGELIEWGEGPYMGQL-DSYARNQWFPHKLFSPLDGISVVKIACGPWHTAII 384
Query: 159 TEKGKLYMWGNAKDSQLGVPG 179
T G+LY +G D GV G
Sbjct: 385 TSSGQLYTYG---DGTFGVLG 402
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+TWG D G+LG + IP+ V +L VSCG T+ L+ G
Sbjct: 451 KLFTWG-DADRGKLGHADKKMK------LIPTCVDSLTDYDFIQVSCGTALTVALSVTGV 503
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G++ + +LG G + L + I++G H +T +GKVF+WG G
Sbjct: 504 VFTSGSSMHGQLGNPHADGKTVSAVEGLLKSEFVRHISSGSSHVAVVTTNGKVFTWGKGK 563
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
GQLG N+ P +++AL V ++CG + +AAV
Sbjct: 564 EGQLGLGDFLNRSTPTLVDALEGRHVESLSCGYNYTAAV 602
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 83 KLLPNLVD----VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE 138
K LP LVD + + IA G H+ +T G+V+SWG G++G+ P V++
Sbjct: 252 KPLPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVVQ 311
Query: 139 ALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+LA V +A G + AVT G+L WG
Sbjct: 312 SLASLHVKDVAYGSKHTCAVTVSGELIEWG 341
Score = 42.4 bits (98), Expect = 0.091, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
VF WG G + ++ +PM++++ V IACG + +A +T++G++Y WGN
Sbjct: 234 VFFWG-DAFGSILECGDTSKPLPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNES 292
Query: 172 DSQLG 176
++G
Sbjct: 293 SGRIG 297
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D I+ +A G
Sbjct: 490 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIVHVACGE 547
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 548 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 607
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 608 ADGQFFTWGKNSHGQLGL 625
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 558 QLFSWGAG-SDGQLGLM-----TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 611
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 612 FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 671
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 672 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 729
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG E + P +V++L +P+A V+ GG + L+ G
Sbjct: 611 QFFTWGKN-SHGQLGLG-----KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 664
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 665 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 724
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 725 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 783
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 508 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQH--------IVHVACGESHSLALSDRGQ 558
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 559 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 616
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 617 KNSHGQLGLGKEFP-SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 675
Query: 175 LGV 177
LG+
Sbjct: 676 LGL 678
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Query: 40 PVAAVSCGGFFTMVLTEEG---QLWNWGANSNYELGRGDRVGGW--KPKLLPNLVDVRII 94
PV+ + ++ V + + WG S + G + G +P++ + D +
Sbjct: 432 PVSHIVTAAYYLAVFVDVSWIRTMLCWGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVK 491
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
++A GG HS+ L +DG+V++ G GQLGH N+ P I ALAD+ + H+ACG S
Sbjct: 492 EVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIVHVACGESH 549
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
S A++++G+L+ WG D QLG+
Sbjct: 550 SLALSDRGQLFSWGAGSDGQLGL 572
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 665 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 717
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 718 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 777
Query: 120 HGQLGHSFTQNQKVP 134
GQLG T N K P
Sbjct: 778 RGQLGTGHTCNVKCP 792
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Anolis carolinensis]
Length = 4963
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 533 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 583
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 584 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 643
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 644 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 700
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 480 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 534
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 535 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 592
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 593 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 641
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+++ WG GR G G N PS +A V CG T V+ G +
Sbjct: 4089 DVFLWG----AGRHGQLAEAGRNAVSPPPSPSFCQA-----QQVICGQNCTFVIQANGTV 4139
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4140 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4199
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4200 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGL 4259
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 91/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4148 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4204
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4205 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN 4264
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + V+ G + + +G+ +LG+
Sbjct: 4265 KKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGL 4312
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+V++ +G
Sbjct: 4245 KLFTFGNGD-YGRLGLG------NTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGS 4297
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4298 MVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4357
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P + AL+ FV IA G + A++ G +Y WG+ + QLG+
Sbjct: 4358 RLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGL 4416
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4300 WAFGDGDYGKLGLG------NSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYT 4353
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V + IA G H+LAL+ G V++WG GQ
Sbjct: 4354 FGQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQ 4413
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
LG T + + P ++ +L + V I+ G SAA
Sbjct: 4414 LGLGHTNHVREPTLVTSLQGKSVRQISAGRCHSAA 4448
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 375 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 420
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 421 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 480
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 481 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 540
Query: 171 KDSQLG 176
+LG
Sbjct: 541 DFGRLG 546
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 636 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 687
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L V I QI+ G HSL AL D +V +W
Sbjct: 688 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 747
>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1173
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 91/183 (49%), Gaps = 15/183 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
LYTWG D G+LG P+ S PSK +A V VS G F++ L +G
Sbjct: 728 SLYTWG-DNSHGQLGRDTADKPD-----SHPSKAEAPAGVTFVHVSAGYGFSVALASDGS 781
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVFSW 115
L++WG NS +LGR V P P+ V+ + +Q + GG H +AL+ DG +++W
Sbjct: 782 LYSWGDNSRGQLGR--TVTSNNPANRPHKVEAPAGITFVQASAGGSHVVALSSDGNIYTW 839
Query: 116 GYGGHGQLGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
G GQLG + T N P + AD T ++ G + AV +G +Y WG+
Sbjct: 840 GDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQGDVYTWGDNTHG 899
Query: 174 QLG 176
+LG
Sbjct: 900 ELG 902
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 9/180 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
LY+WG D G+LG R + P KV+A + S GG + L+ +G
Sbjct: 781 SLYSWG-DNSRGQLG----RTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVALSSDGN 835
Query: 60 LWNWGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG NS +LGR KP DV ++ G H++A+ G V++WG
Sbjct: 836 IYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQGDVYTWGD 895
Query: 118 GGHGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
HG+LG S T P + A T + G S S AV++ G +Y WG+ + +LG
Sbjct: 896 NTHGELGRSTTSTPADKPGKADTPAGITFTQASAGESHSVAVSDDGSIYTWGDTANGRLG 955
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 1 ELYTWGRDEGEGRLG--LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
+YTWG D G+LG + ++ G P+ V +VS G T+ + +G
Sbjct: 835 NIYTWG-DNSAGQLGRTVTSNNPADKPGKADTPADVT-----FTSVSAGQGHTVAVDTQG 888
Query: 59 QLWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG N++ ELGR KP + Q + G HS+A++DDG +++WG
Sbjct: 889 DVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQASAGESHSVAVSDDGSIYTWGD 948
Query: 118 GGHGQLGH--SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+G+LG + T K P + A T + GG S A+ G LY WG++ +
Sbjct: 949 TANGRLGRDTNITPADK-PGKADTPAGVTFTQASAGGKHSIALGSDGSLYTWGDSGKTSA 1007
Query: 176 GVP 178
G P
Sbjct: 1008 GRP 1010
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 9/170 (5%)
Query: 13 RLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
R L GP G + A + ++ G + + +G L+ WG NS+ +LG
Sbjct: 682 RWKLDKDNGPESGGQTVTLTPPPARGIRISQADGGDLHSAAVGSDGSLYTWGDNSHGQLG 741
Query: 73 RGDRVGGWKPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
R KP P+ + V + ++ G S+AL DG ++SWG GQLG + T
Sbjct: 742 RDTAD---KPDSHPSKAEAPAGVTFVHVSAGYGFSVALASDGSLYSWGDNSRGQLGRTVT 798
Query: 129 QNQKV--PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
N P +EA A + GGS A++ G +Y WG+ QLG
Sbjct: 799 SNNPANRPHKVEAPAGITFVQASAGGSHVVALSSDGNIYTWGDNSAGQLG 848
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 32/194 (16%)
Query: 1 ELYTWG--------RDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTM 52
LY+WG RD G + PG+ +++P + + +S G F++M
Sbjct: 298 NLYSWGENKYGELGRDTGSAIYDVKPGK-------VNLPKGI----TKITQISAGTFYSM 346
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGW-----KPKLLPNLVDVRIIQ-IANGGYHSLAL 106
L +G L++WG N+ ELGR GG+ P+ + V+ I G + SLA
Sbjct: 347 ALDSDGDLYSWGDNTYDELGR--YAGGYPFRDRSPRKMTMPAGVKKFTWIKAGEWTSLAT 404
Query: 107 TDDGKVFSWGYGGHGQLGHSF--TQNQKVP--MVIEALADEFVTHIACGGSTSAAVTEKG 162
+ DG ++SWG+ +GQLG + + + P + + A +F T ++ S A+ G
Sbjct: 405 SSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPAGVTKF-TKVSAEHRHSLALGSDG 463
Query: 163 KLYMWGNAKDSQLG 176
LY WG QLG
Sbjct: 464 NLYSWGLNDCKQLG 477
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 1 ELYTWGRDEGEGRLGLGP-GRGPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEE 57
LY+WG + +G LG P + + K+ P V G + ++ L +
Sbjct: 238 NLYSWG-NNADGELGRETVSTTPKDNPQIDNQPKLVTPPAGVHFTQACAGKWHSLALGSD 296
Query: 58 GQLWNWGANSNYELGR--GDRVGGWKPKL--LPNLVDVRIIQIANGGYHSLALTDDGKVF 113
G L++WG N ELGR G + KP LP + +I QI+ G ++S+AL DG ++
Sbjct: 297 GNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGI-TKITQISAGTFYSMALDSDGDLY 355
Query: 114 SWGYGGHGQLG-----HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
SWG + +LG + F M + A +F T I G TS A + G LY WG
Sbjct: 356 SWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVKKF-TWIKAGEWTSLATSSDGSLYSWG 414
Query: 169 NAKDSQLGVPGLPVVQ 184
+ QLG P Q
Sbjct: 415 WNEYGQLGRNTAPARQ 430
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 22/181 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGP-NEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
++YTWG D G LG P ++ G P+ + S G ++ ++++G
Sbjct: 889 DVYTWG-DNTHGELGRSTTSTPADKPGKADTPAGIT-----FTQASAGESHSVAVSDDGS 942
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVFSW 115
++ WG +N LGR + P P D V Q + GG HS+AL DG +++W
Sbjct: 943 IYTWGDTANGRLGRDTNI---TPADKPGKADTPAGVTFTQASAGGKHSIALGSDGSLYTW 999
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G G P ++ A T + G S A+ G LY WG+ QL
Sbjct: 1000 GDSGKTSAGR--------PNKVDTPAGITFTQASAGASYCLALGSDGNLYSWGDNAKGQL 1051
Query: 176 G 176
G
Sbjct: 1052 G 1052
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK--------PKLLPNLVD 90
V VS G + + +G L++WG N++ ELGR K PKL+
Sbjct: 218 VHFTQVSTGYTHFLAIGSDGNLYSWGNNADGELGRETVSTTPKDNPQIDNQPKLVTPPAG 277
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH---SFTQNQKVPMVIEALADEFVTH 147
V Q G +HSLAL DG ++SWG +G+LG S + K V +T
Sbjct: 278 VHFTQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGITKITQ 337
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
I+ G S A+ G LY WG+ +LG
Sbjct: 338 ISAGTFYSMALDSDGDLYSWGDNTYDELG 366
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 32/196 (16%)
Query: 1 ELYTWGRDEGEGRLGLGPG------RGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
+LY+WG D LG G R P + +++P+ VK + G + ++
Sbjct: 353 DLYSWG-DNTYDELGRYAGGYPFRDRSPRK---MTMPAGVKKF----TWIKAGEWTSLAT 404
Query: 55 TEEGQLWNWGANSNYELGRG------DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
+ +G L++WG N +LGR DR + +P V + +++ HSLAL
Sbjct: 405 SSDGSLYSWGWNEYGQLGRNTAPARQDRTP--RKVTMPAGV-TKFTKVSAEHRHSLALGS 461
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQ------KVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
DG ++SWG QLG + KVP A +F T ++ G S S A+ G
Sbjct: 462 DGNLYSWGLNDCKQLGRDTGSAKYDVKPGKVPT--PAGVAQF-TEVSAGYSHSLAIGSDG 518
Query: 163 KLYMWGNAKDSQLGVP 178
LY WG K +LG P
Sbjct: 519 NLYSWGQNKYGELGRP 534
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Query: 50 FTMVLTEEGQL---WNWGANSNYELGR--GDRVGGWKPKLLPNLVD-VRIIQIANGGYHS 103
F+ +T++ L W+ ++ ++L + G GG L P +RI Q G HS
Sbjct: 661 FSRPVTDKVTLTAHWSSAESNRWKLDKDNGPESGGQTVTLTPPPARGIRISQADGGDLHS 720
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
A+ DG +++WG HGQLG P EA A H++ G S A+ G
Sbjct: 721 AAVGSDGSLYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGVTFVHVSAGYGFSVALASDG 780
Query: 163 KLYMWGNAKDSQLG---VPGLPVVQPCPVE 189
LY WG+ QLG P +P VE
Sbjct: 781 SLYSWGDNSRGQLGRTVTSNNPANRPHKVE 810
>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1073
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP---VAAVSCGGFFTMVLTEE 57
E+YTWG +G GL G G + + IP ++ P+ +A+VSCG + T ++T
Sbjct: 344 EIYTWG--DGTHNAGL-LGHGTDVSHW--IPKRISG-PLEGLQIASVSCGPWHTALITST 397
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G + LG GD+ + P+ + +L +R I +A G +H+ A+ +
Sbjct: 398 GQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSS 457
Query: 109 --DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
GK+F+WG G +LGH + + P + AL D +ACG S + +T GK+Y
Sbjct: 458 VSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYT 517
Query: 167 WGNAKDSQLGVPGLPVVQPCPVE 189
G+ QLG P PC VE
Sbjct: 518 MGSTVYGQLGNPNADGKLPCLVE 540
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 22/173 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L+TWG D + RLG G + P P+ V AL V+CG T+ LT G+
Sbjct: 462 KLFTWG-DGDKSRLGHG-DKEPRLK-----PTCVSALIDHTFHRVACGHSLTVGLTTSGK 514
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII-----QIANGGYHSLALTDDGKVFS 114
++ G+ +LG + G LP LV+ ++ +IA G YH LT +VF+
Sbjct: 515 VYTMGSTVYGQLGNPNADGK-----LPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFT 569
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
WG G +G+LGH +++K P +++AL + V +IACG + +AA+ L+ W
Sbjct: 570 WGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTAAIC----LHKW 618
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G +G G+ G G E + P +V++L + AV+CG + + E
Sbjct: 399 QLFTFG----DGTFGV-LGHGDKET--VFYPREVESLSGLRTIAVACGVWHAAAIVEVIV 451
Query: 57 --------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+L+ WG LG GD+ KP + L+D ++A G ++ LT
Sbjct: 452 THSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTT 511
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMW 167
GKV++ G +GQLG+ + K+P ++E L + V IACG A +T + +++ W
Sbjct: 512 SGKVYTMGSTVYGQLGNP-NADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTW 570
Query: 168 GNAKDSQLG 176
G + +LG
Sbjct: 571 GKGANGRLG 579
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 7/176 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS---IPSKVKA-LPVPVAAVSCGGFFTMVLTE 56
++Y WG E G + G S IP +++ + + V ++CG +++
Sbjct: 230 DVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSR 289
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+G+++ WG S LG G P+L+ +L I +A G +H+ A+T G++++WG
Sbjct: 290 QGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWG 349
Query: 117 YGGH--GQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G H G LGH + +P I L + ++CG +A +T G+L+ +G+
Sbjct: 350 DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGD 405
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D II +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIIHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 SDGQFFTWGKNSHGQLGL 171
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLG 275
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
+GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 YGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA----CGGSTSAAVTEKGKL 164
GQLG T N K P ++ A AD F HI GG + + K +
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Query: 165 Y 165
Y
Sbjct: 384 Y 384
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+ WG + G+LGLG G E LS P +K+L +P+ +S GG + L+ G
Sbjct: 157 QLFVWGENSS-GQLGLGKG----EPSTLS-PQPLKSLCGIPLTQISAGGDHSFALSFSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG NS +LG D P + L +++ I+ G H+ ALT +G +F++G G
Sbjct: 211 VFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH T+N+ +P + L V+ IACG T A V G +Y +G QLG
Sbjct: 271 KGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGT 329
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG G G+LG+G +EA S + V+CG ++ L +G ++
Sbjct: 2 MLCWG-SSGAGQLGIGA----SEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVY 56
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
G+NS +LG GG +P+L+ L +I ++ G HSLA+ + G+VF+WG G G
Sbjct: 57 TCGSNSCGQLGHDK--GGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGG 114
Query: 122 QLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG + +VP +I+ L + ++ + CG A+++ G+L++WG QLG+
Sbjct: 115 QLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGL 171
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 94/217 (43%), Gaps = 61/217 (28%)
Query: 21 GPNEAGGL------SIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR 73
G N G L S P V AL ++ VSCG ++ + E+GQ++ WGA +LG
Sbjct: 59 GSNSCGQLGHDKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGL 118
Query: 74 GDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-------- 124
G + P+L+ L + RI Q+ G +H +AL+ DG++F WG GQLG
Sbjct: 119 GTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPST 178
Query: 125 ----------------------HSFT-----------------------QNQKVPMVIEA 139
HSF Q++ VP I+
Sbjct: 179 LSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKF 238
Query: 140 LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
L + V +I+CG +AA+T++G L+ +GN QLG
Sbjct: 239 LRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLG 275
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3993 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4043
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4044 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4103
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4104 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4163
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4052 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4108
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4109 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4168
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4169 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4216
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4204 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4257
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4258 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4317
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4318 LGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4354
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4149 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4201
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4202 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4261
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4262 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4320
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
Length = 228
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALPVPVAAVSCGGFFTMVLTEEGQL 60
L +WG E G+LGL G + +P ++ + + V+CG T+ LT G +
Sbjct: 1 LVSWGCGE-FGQLGLKDAAGVFNS---PLPRFLRGSRELLFVRVACGSSHTLALTGSGDV 56
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+++G + LG G P ++ +L + I+QIA G HS ALT +G++FSWG G +
Sbjct: 57 YSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKY 116
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG +N P+ + AL+D +T + CG + A+ G+L+ WG+ Q G
Sbjct: 117 GQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTG 172
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Query: 10 GEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
G+G G G G E+ S P V +L + + ++CG + LT EGQL++WG
Sbjct: 60 GQGTFG-ALGHGTTES--CSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKY 116
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G +P + L D + Q+ G +++A+ DG++FSWG+G GQ GH
Sbjct: 117 GQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQ 176
Query: 129 QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
N VP ++ +L ++ + + G + A+T G +Y WG+ + Q+ +PG
Sbjct: 177 DNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV-LPG 226
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
gallus]
Length = 4860
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 88/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N ++ PS +A V CG T V+ G +
Sbjct: 3997 DVYLWG----AGRHGQLAEAGRNVMVPVAAPSFSQA-----QQVVCGQNCTFVIQANGTV 4047
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGL 4167
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4056 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN 4172
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4173 KKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGL 4220
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4208 WAFGDGDYGKLGLG------NSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYT 4261
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I IA G H+LAL+ G V++WG GQ
Sbjct: 4262 FGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQ 4321
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P +I L + + I+ G SAA T
Sbjct: 4322 LGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4358
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4153 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGS 4205
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4206 MVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4265
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P + L+ F+ IA G + A++ G +Y WG+ + QLG+
Sbjct: 4266 RLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGL 4324
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L V I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4061 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4117
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L +IQ++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4118 LGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4177
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4178 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4225
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + ++E+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVSEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 4002 DVYLWG----AGRHGQLAEAGRNVMIPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4052
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4053 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4112
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4113 GDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4172
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4213 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4266
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4267 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4326
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P +I L + + I+ G SAA T
Sbjct: 4327 LGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4363
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAV+E G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4158 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4210
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4211 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4270
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4271 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4329
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L V I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3996 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4046
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4166
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4055 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4171
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4172 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4219
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4207 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4261 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4320
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4321 LGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4357
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4152 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4204
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4205 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4264
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4265 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4323
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
protein, partial [Zea mays]
Length = 688
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 10/172 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+TWG D + RLG G ++ L + V+CG T+ LT GQ+
Sbjct: 269 KLFTWG-DGDKHRLGHG-----DKETRLKPTCVATLIDHDFYRVACGHSLTVALTTSGQV 322
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ G +LG G + +V +++QIA G YH LT+ +VF+WG G +
Sbjct: 323 LSMGNAVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIACGSYHVAVLTNRSEVFTWGKGAN 382
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
G+LGH T+++KVP ++EAL D V +IACG + +AA+ + Y W + D
Sbjct: 383 GRLGHGDTEDRKVPTLVEALKDRAVRYIACGANFTAAICQ----YKWVSGAD 430
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 20/204 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALP-VPVAAVSCGGFFTMVLTEEG 58
ELYTWG +G +GL G G N+ G IP ++ AL + VA VSCG + T ++T G
Sbjct: 149 ELYTWG--DGTYNVGL-LGHG-NDVGHW-IPKRISGALEGLQVAYVSCGTWHTALITSMG 203
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
QL+ +G S LG GD P+ + +L ++ I +A G +H+ A+ +
Sbjct: 204 QLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSV 263
Query: 109 ---DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
GK+F+WG G +LGH + + P + L D +ACG S + A+T G++
Sbjct: 264 KLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLTVALTTSGQVL 323
Query: 166 MWGNAKDSQLGVPGLPVVQPCPVE 189
GNA QLG P PC VE
Sbjct: 324 SMGNAVYGQLGNPHSDGRIPCLVE 347
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 21/190 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + +S P +V++L + AV+CG + T + E
Sbjct: 204 QLFTFG-DGSFGVLGHG------DLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIV 256
Query: 57 ----------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
G+L+ WG + LG GD+ KP + L+D ++A G ++AL
Sbjct: 257 TRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLTVAL 316
Query: 107 TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
T G+V S G +GQLG+ + + +V + + E V IACG A +T + +++
Sbjct: 317 TTSGQVLSMGNAVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIACGSYHVAVLTNRSEVFT 376
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 377 WGKGANGRLG 386
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 9/185 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSI--PSKVKA-LPVPVAAVSCGGFFTMVLTEE 57
++Y WG + + G + G + I P +++ L + V V CG ++ +
Sbjct: 36 DVYVWGEVVCDTSVRTGSDTVISSTGRIDILLPKPLESNLVLDVYHVDCGVKHAALVMKN 95
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG +S LG G R +P+L+ +L + +A G +H+ A+T G++++WG
Sbjct: 96 GEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYTWGD 155
Query: 118 GGH--GQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G + G LGH +P I AL V +++CG +A +T G+L+ +G D
Sbjct: 156 GTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTWHTALITSMGQLFTFG---DGS 212
Query: 175 LGVPG 179
GV G
Sbjct: 213 FGVLG 217
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus
cuniculus]
Length = 4860
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3997 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4047
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4167
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4056 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4172
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4173 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4220
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4208 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4262 FGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4321
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + + I+ G SAA T
Sbjct: 4322 LGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4358
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4153 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4205
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4206 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4265
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P + LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4266 RLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4324
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
CCMP2712]
Length = 279
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 5/169 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y+WG GRLG G + + L+ K ++CG + LT++G+L
Sbjct: 50 QIYSWGIGL-NGRLGHGNIQDSSAPKMLASTKK----NCTAVQIACGAAHSAYLTQDGKL 104
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG N ELG G+R W P L+ L D+ + +A G + A T G +FSWG G H
Sbjct: 105 YSWGRGLNGELGNGERHDQWTPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKH 164
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G LG +++ P ++ ++ + +ACG A+TE GKL+ WG
Sbjct: 165 GCLGLGDREDRLEPSLVRLREEDRIIRVACGEHHCLALTEDGKLWGWGR 213
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 14 LGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
L LG G NE P +K+L V V+ G L GQ+++WG N LG
Sbjct: 8 LCLGHGSHANE----KYPKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNGRLG 63
Query: 73 RGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G+ PK+L + + +QIA G HS LT DGK++SWG G +G+LG+ +Q
Sbjct: 64 HGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNGERHDQ 123
Query: 132 KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
P ++ L D V+++ACG +T+ A T G L+ WG+ K LG+
Sbjct: 124 WTPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGL 169
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 87/172 (50%), Gaps = 8/172 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY+WGR GL G E P+ V L + V+ V+CG T T G
Sbjct: 103 KLYSWGR-------GLNGELGNGERHDQWTPNLVLRLRDLVVSYVACGTNTTFACTGGGL 155
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L++WG+ + LG GDR +P L+ + RII++A G +H LALT+DGK++ WG G
Sbjct: 156 LFSWGSGKHGCLGLGDREDRLEPSLVRLREEDRIIRVACGEHHCLALTEDGKLWGWGRGT 215
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
G G T P + D + ++CG SA +T +G ++ +G+ +
Sbjct: 216 GGCHGLGHTSEVLSPHKLPMPEDRTIVSMSCGRWHSAYLTIRGDIFCFGSGR 267
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG N LG G PK + +L + +IQ+A G H AL G+++SWG G +G
Sbjct: 1 SWGTGFNLCLGHGSHANEKYPKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNG 60
Query: 122 QLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+LGH Q+ P M+ + IACG + SA +T+ GKLY WG + +LG
Sbjct: 61 RLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELG 116
>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Ornithorhynchus anatinus]
Length = 806
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 58/184 (31%), Positives = 106/184 (57%), Gaps = 21/184 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELY WG D EG++GL + +P +V + PV+ VSCG + + ++T +G+L
Sbjct: 246 ELYMWG-DNSEGQIGLA------SESNVCVPCRV-VIGKPVSWVSCGYYHSALVTTDGEL 297
Query: 61 WNWGANSNYELG------RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
+ +G N +LG + R+ P+L+P + ++ Q+A GG H++ALT++ V++
Sbjct: 298 YTFGEPENGKLGLSSEQLKNHRI----PQLVPG-ISGKVNQVACGGGHTVALTEE-DVYT 351
Query: 115 WGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
+G G GQLG + VP V+E L + + ++ACG + +A +++ G +Y +G+ +
Sbjct: 352 FGLGEFGQLGLGTCIFETSVPKVVEHLRKQKIHYVACGENHTALISDTGLMYTFGDGRHG 411
Query: 174 QLGV 177
+LG+
Sbjct: 412 KLGL 415
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+IPSK +A +SCG T +T +L+ G+N+ +LG G + KP + L
Sbjct: 111 NIPSKFWLRNDTLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPTCVKAL 170
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTH 147
++ A G H+L T+ G V++ G GQLG T+ + I + +
Sbjct: 171 KPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQ 230
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLP-VVQPCPV 188
++ G +TSAA+TE G+LYMWG+ + Q+G+ V PC V
Sbjct: 231 LSAGSNTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRV 272
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYT+G E G+LGL + N IP V + V V+CGG T+ LTEE +
Sbjct: 296 ELYTFGEPE-NGKLGLSSEQLKNH----RIPQLVPGISGKVNQVACGGGHTVALTEE-DV 349
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G +LG G + PK++ +L +I +A G H+ ++D G ++++G G
Sbjct: 350 YTFGLGEFGQLGLGTCIFETSVPKVVEHLRKQKIHYVACGENHTALISDTGLMYTFGDGR 409
Query: 120 HGQLG---HSFTQNQKVPMVIEALADEFVTHIACGG 152
HG+LG +FT NQ +P + V +ACGG
Sbjct: 410 HGKLGLGEENFT-NQFIPTLCSNFLRFSVHLVACGG 444
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3995 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4045
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4046 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4105
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4106 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4165
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4054 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4110
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4111 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4170
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4171 KKLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGL 4218
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4206 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4259
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4260 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4319
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4320 LGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4356
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 88/187 (47%), Gaps = 26/187 (13%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGY-HSLALTDDG 110
+ +G + G S LG GD K L P+ +R + + G H+LA T +G
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHR-SIRKVSSSKGSDGHTLAFTTEG 477
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGE 537
Query: 170 AKDSQLG 176
+LG
Sbjct: 538 GDFGRLG 544
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4151 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSSDGS 4203
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4204 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4263
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4264 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4322
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
Length = 228
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 5/176 (2%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-ALPVPVAAVSCGGFFTMVLTEEGQL 60
L +WG E G+LGL G + +P ++ + + V+CG T+ LT G +
Sbjct: 1 LVSWGCGE-FGQLGLKDAAGVFTS---PLPRFLRGSRELLFVRVACGSSHTLALTGSGDV 56
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+++G + LG G P ++ +L + I+QIA G HS ALT +G++FSWG G +
Sbjct: 57 YSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKY 116
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG +N P+ + AL+D +T + CG + A+ G+L+ WG+ Q G
Sbjct: 117 GQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTG 172
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Query: 10 GEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
G+G G G G E+ S P V +L + + ++CG + LT EGQL++WG
Sbjct: 60 GQGTFG-ALGHGTTES--CSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKY 116
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G +P + L D + Q+ G +++A+ DG++FSWG+G GQ GH
Sbjct: 117 GQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQ 176
Query: 129 QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
N VP ++ +L ++ + + G + A+T G +Y WG+ + Q+ +PG
Sbjct: 177 DNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV-LPG 226
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
Query: 60 LWNWGANSNYELGRGDRVGGWK---PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L +WG +LG D G + P+ L ++ +++A G H+LALT G V+S+G
Sbjct: 1 LVSWGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFG 60
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G LGH T++ P+++++L + IACG + S A+T +G+L+ WG K QLG
Sbjct: 61 QGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLG 120
Query: 177 VPGLP-VVQPCPV 188
+ +QP PV
Sbjct: 121 CGSVENHLQPVPV 133
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 3986 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4042
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L +IQ++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4043 LGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4102
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4103 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4150
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3927 DVYLWG----AGRHGQLAEAGRNVMIPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 3977
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 3978 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4037
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4038 GDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4097
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4138 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4191
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I IA G H+LAL G V++WG GQ
Sbjct: 4192 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQ 4251
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P +I L + + I+ G SAA T
Sbjct: 4252 LGLGHTNHVREPTLITILQGKNIRQISAGRCHSAAWT 4288
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4083 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4135
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4136 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4195
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + IA G + A+ G +Y WG+ + QLG+
Sbjct: 4196 RLIGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGL 4254
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L V I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1096
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 102/205 (49%), Gaps = 23/205 (11%)
Query: 1 ELYTWG-RDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTE 56
+LYTWG G LG NEA +P K+ P + VAAVSCG + T V+T
Sbjct: 377 DLYTWGGSSHNCGLLGYR-----NEASNW-VPKKLNG-PLEGIHVAAVSCGPWHTAVVTS 429
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD-------- 108
GQL+ +G + LG GDR P+ + +L +R ++ A G +H+ A+ +
Sbjct: 430 SGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSS 489
Query: 109 ----DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
GK+F+WG G G+LGH +++ VP + AL + +ACG S + A+T G +
Sbjct: 490 SNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHSMTVALTTTGHV 549
Query: 165 YMWGNAKDSQLGVPGLPVVQPCPVE 189
Y G+ QLG P P VE
Sbjct: 550 YTMGSPVYGQLGNPQADGKLPVRVE 574
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+L+TWG D +GRLG G + +P+ V AL P V+CG T+ LT G
Sbjct: 496 KLFTWG-DGDKGRLGHG------DKESRLVPTCVAALVEPNFCQVACGHSMTVALTTTGH 548
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+ +LG G ++ L + ++ G YH LT +V++WG G
Sbjct: 549 VYTMGSPVYGQLGNPQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWGKGA 608
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+G+LGH T ++ P ++EAL D+ V + CG S +AA+ L+ W + D +
Sbjct: 609 NGRLGHGDTDDRSSPTIVEALKDKQVKSVVCGTSFTAAIC----LHKWVSGIDQSM 660
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 22/190 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G R +S P +V++L + +CG + T + E
Sbjct: 432 QLFTFG-DGTFGVLGHGDRRS------VSTPREVESLKGLRTVRAACGVWHTAAVVEVMV 484
Query: 57 ---------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+L+ WG LG GD+ P + LV+ Q+A G ++ALT
Sbjct: 485 GSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHSMTVALT 544
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYM 166
G V++ G +GQLG+ + K+P+ +E L+ FV + CG A +T + ++Y
Sbjct: 545 TTGHVYTMGSPVYGQLGNP-QADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYT 603
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 604 WGKGANGRLG 613
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A+ + V ++CG ++T++G++++WG LG G PKL+ L + +
Sbjct: 302 AVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVEL 361
Query: 96 IANGGYHSLALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIEA-LADEFVTHIACGG 152
+A G YHS A+T G +++WG H G LG+ + VP + L V ++CG
Sbjct: 362 VACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGP 421
Query: 153 STSAAVTEKGKLYMWGN 169
+A VT G+L+ +G+
Sbjct: 422 WHTAVVTSSGQLFTFGD 438
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%)
Query: 76 RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
R + PK L + V + + IA G H+ +T G+VFSWG G+LGH + P
Sbjct: 290 RTDSFVPKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPK 349
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+++ L + V +ACG S AVT G LY WG
Sbjct: 350 LVDGLKNTNVELVACGEYHSCAVTLSGDLYTWG 382
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Meleagris gallopavo]
Length = 4334
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 88/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N ++ PS +A V CG T V+ G +
Sbjct: 3471 DVYLWG----AGRHGQLAEAGRNVMVPVAAPSFSQA-----QQVVCGQNCTFVIQANGTV 3521
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 3522 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3581
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 3582 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGL 3641
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 3530 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3586
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 3587 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN 3646
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 3647 KKLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGL 3694
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 3682 WAFGDGDYGKLGLG------NSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYT 3735
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I IA G H+LAL+ G V++WG GQ
Sbjct: 3736 FGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQ 3795
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P +I L + + I+ G SAA T
Sbjct: 3796 LGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 3832
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 3627 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTVAVSMDGS 3679
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 3680 MVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQD 3739
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P + L+ F+ IA G + A++ G +Y WG+ + QLG+
Sbjct: 3740 RLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGL 3798
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L V I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|147791382|emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera]
Length = 461
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 89/179 (49%), Gaps = 26/179 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
L+ WG+++G P+ G P+ + + VSCG T+ L+EEG +
Sbjct: 141 RLWVWGQNQGSNY--------PHLFWGAFTPNTI------IRQVSCGAVHTVALSEEGLV 186
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVD---------VRIIQIANGGYHSLALTDDGK 111
WG N +LGRG G + + N V+I Q++ G YH+ A++++G+
Sbjct: 187 QAWGYNEYGQLGRGITCEGLQGARVINAYSKFLNEAPELVKITQVSCGEYHTAAISENGE 246
Query: 112 VFSWGYGGHGQLGHSFTQ---NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
V++WG G GQLGH Q + VP + AL + IACGG + A+T KG LY W
Sbjct: 247 VYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGISIKDIACGGVHTCALTSKGALYAW 305
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 60 LWNWGANSNYELGR-GDRVGGWKPKLLPNLV-------DVRIIQIANGGYHSLALTDDGK 111
++ WG N + GR G + PK LP + + R + IA G H+ A+ DG
Sbjct: 21 IYVWGYNQRGQTGRNGKELQLRIPKQLPPELFGCPAGANSRWLSIACGREHTAAVASDGS 80
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE---------KG 162
+F+WG GQLG +K P ++ L EFV +CG +AA+ E
Sbjct: 81 LFTWGANDFGQLGDGTEDGRKHPKKVKQLQTEFVKSXSCGAHCTAAIAEPREKNGIVSTS 140
Query: 163 KLYMWGNAKDS 173
+L++WG + S
Sbjct: 141 RLWVWGQNQGS 151
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
E+YTWG G+LG G E +P +V AL + + ++CGG T LT +G
Sbjct: 246 EVYTWGLGN-MGQLGHCSLQYGDKEL----VPRRVVALDGISIKDIACGGVHTCALTSKG 300
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKL---------LPNLVDVRIIQ-IANGGYHSLALTD 108
L+ WG +LG G + G + L +P LV +Q IA G H+L
Sbjct: 301 ALYAWGGGQAGQLGLGPQSGLFSCNLNESDMLLQNIPVLVVPTGVQLIACGHSHTLISMK 360
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
DG++ WGY +GQ + + P I+ E V +A GG SA +T+ L
Sbjct: 361 DGRICGWGYNSYGQAANEKSTYAWYPSPIDWCVGE-VRQLAAGGGHSAVLTDACSL 415
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK---PKLLPNLVDVRIIQ 95
V + VSCG + T ++E G+++ WG + +LG G K P+ + L + I
Sbjct: 226 VKITQVSCGEYHTAAISENGEVYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGISIKD 285
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHG-------------QLGHSFTQNQKVPMVIEALAD 142
IA GG H+ ALT G +++WG G G L S Q +P+++
Sbjct: 286 IACGGVHTCALTSKGALYAWGGGQAGQLGLGPQSGLFSCNLNESDMLLQNIPVLVVPTG- 344
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWG 168
V IACG S + + G++ WG
Sbjct: 345 --VQLIACGHSHTLISMKDGRICGWG 368
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 71/196 (36%), Gaps = 62/196 (31%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
+++CG T + +G L+ WGAN +LG G G PK + L + + G +
Sbjct: 64 SIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHPKKVKQLQTEFVKSXSCGAHC 123
Query: 103 SLALTD-----------------------------------------------------D 109
+ A+ + +
Sbjct: 124 TAAIAEPREKNGIVSTSRLWVWGQNQGSNYPHLFWGAFTPNTIIRQVSCGAVHTVALSEE 183
Query: 110 GKVFSWGYGGHGQLGHSFT----QNQKVPMVIEALADEF-----VTHIACGGSTSAAVTE 160
G V +WGY +GQLG T Q +V +E +T ++CG +AA++E
Sbjct: 184 GLVQAWGYNEYGQLGRGITCEGLQGARVINAYSKFLNEAPELVKITQVSCGEYHTAAISE 243
Query: 161 KGKLYMWGNAKDSQLG 176
G++Y WG QLG
Sbjct: 244 NGEVYTWGLGNMGQLG 259
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3965 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4015
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4016 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4075
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4076 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4135
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4024 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4080
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4081 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4140
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4141 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4188
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4176 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4229
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL +G V++WG GQ
Sbjct: 4230 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4289
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + + I+ G SAA T
Sbjct: 4290 LGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4326
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4121 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4173
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4174 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4233
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4234 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4292
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|351711665|gb|EHB14584.1| Putative E3 ubiquitin-protein ligase HERC3 [Heterocephalus glaber]
Length = 1051
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D II +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIIHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 98/183 (53%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L+++GQ
Sbjct: 54 EVYTCGLN-TKGQLGHEREGNKPEQIGALA--------DQHIIHVACGESHSLALSDQGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F+ +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFS-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGL 118
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 26/183 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFSSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHS------------------FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
GQLG S N++ P ++ L + V +I+CG +A +T+
Sbjct: 218 NAGQLGLSDEKGIKQGALDKTENIRGLYSNRESPCHVKLLRTQKVVYISCGDEHTAVLTK 277
Query: 161 KGK 163
+ +
Sbjct: 278 EHR 280
>gi|118351057|ref|XP_001008807.1| Kinesin motor domain containing protein [Tetrahymena thermophila]
gi|89290574|gb|EAR88562.1| Kinesin motor domain containing protein [Tetrahymena thermophila
SB210]
Length = 1264
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + +GRLG+ G P + + IP+ + VS G + ++ +GQ+
Sbjct: 862 IYIWGNGK-DGRLGI-EGEKPFKFPQI-IPN------IQACQVSLGYHHSACISNQGQIL 912
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVFSWGY 117
WG + +LG ++ LLP V+ + I+ + G H+LAL++DG+VFSWG+
Sbjct: 913 TWGRGNRGQLGHSS----FENCLLPTPVNFFSKMSIVSVGCGWQHTLALSNDGRVFSWGF 968
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G GQLG Q+Q P I +L FVT I G S S+ +T +G M+G D +L
Sbjct: 969 GEDGQLGLGDYQSQNSPQFINSLEGYFVTQINAGHSHSSVITSEGIFMMFGCNIDHRL 1026
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 67/121 (55%), Gaps = 5/121 (4%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWG 116
G ++ WG + LG + G KP P ++ +++ Q++ G +HS +++ G++ +WG
Sbjct: 860 GIIYIWGNGKDGRLG----IEGEKPFKFPQIIPNIQACQVSLGYHHSACISNQGQILTWG 915
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G GQLGHS +N +P + + + + CG + A++ G+++ WG +D QLG
Sbjct: 916 RGNRGQLGHSSFENCLLPTPVNFFSKMSIVSVGCGWQHTLALSNDGRVFSWGFGEDGQLG 975
Query: 177 V 177
+
Sbjct: 976 L 976
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 68/112 (60%), Gaps = 4/112 (3%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGD---RVGGWKPKLLPNLVDVRIIQIANGG 100
VSCG FT+V+ E+ Q++++G S Y LG D ++PKL+ +L + +I ++ G
Sbjct: 1144 VSCGDSFTLVINEQSQVYSFGKGSYYRLGHLDIQTNQNVYEPKLIESLKNFKITSVSTGC 1203
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQ-NQKVPMVIEALADEFVTHIACG 151
H++A+T+DGKV++WG+ + QLG ++ + + P + L+ V +CG
Sbjct: 1204 RHAVAITNDGKVYTWGFNFYDQLGLGDSEKDYQQPTKVTKLSGLNVKQSSCG 1255
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ TWGR G+LG + +P+ V + + +V CG T+ L+ +G+
Sbjct: 910 QILTWGRGN-RGQLG------HSSFENCLLPTPVNFFSKMSIVSVGCGWQHTLALSNDGR 962
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG + +LG GD P+ + +L + QI G HS +T +G +G
Sbjct: 963 VFSWGFGEDGQLGLGDYQSQNSPQFINSLEGYFVTQINAGHSHSSVITSEGIFMMFGCNI 1022
Query: 120 HGQLGHSFTQNQKVPMV--IEALADEF-----VTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+L + QNQ +P + +E L E+ + G + SA +T+ G LY G +
Sbjct: 1023 DHRLMNKTNQNQFLPCITELEFLRQEYGSDYNAVKASLGVNHSAVITKNGNLYTSGLGNE 1082
Query: 173 SQLG 176
QLG
Sbjct: 1083 GQLG 1086
Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ-NQKV--PMVIEALADEFVTHI 148
+ IQ++ G +L + + +V+S+G G + +LGH Q NQ V P +IE+L + +T +
Sbjct: 1140 KAIQVSCGDSFTLVINEQSQVYSFGKGSYYRLGHLDIQTNQNVYEPKLIESLKNFKITSV 1199
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ G + A+T GK+Y WG QLG+
Sbjct: 1200 STGCRHAVAITNDGKVYTWGFNFYDQLGL 1228
Score = 43.5 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 87/221 (39%), Gaps = 57/221 (25%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG E +G+LGLG + N P + +L V ++ G + V+T EG
Sbjct: 963 VFSWGFGE-DGQLGLGDYQSQNS------PQFINSLEGYFVTQINAGHSHSSVITSEGIF 1015
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLV-----------DVRIIQIANGGYHSLALTDD 109
+G N ++ L + + LP + D ++ + G HS +T +
Sbjct: 1016 MMFGCNIDHRLMNKTN----QNQFLPCITELEFLRQEYGSDYNAVKASLGVNHSAVITKN 1071
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF------------------------- 144
G +++ G G GQLG +++ ++I+ ++E
Sbjct: 1072 GNLYTSGLGNEGQLGSFISEDTPNSLMIQKNSNEMSEYSKFEEEQQENQDQFDRICYFNK 1131
Query: 145 ---------VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
++CG S + + E+ ++Y +G +LG
Sbjct: 1132 VNFFNKKNKAIQVSCGDSFTLVINEQSQVYSFGKGSYYRLG 1172
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G ++ WG G G+LG + K P +I + ++ G SA ++ +G++ WG
Sbjct: 859 NGIIYIWGNGKDGRLGIEGEKPFKFPQIIPNIQ---ACQVSLGYHHSACISNQGQILTWG 915
Query: 169 NAKDSQLG 176
QLG
Sbjct: 916 RGNRGQLG 923
>gi|224120790|ref|XP_002330952.1| predicted protein [Populus trichocarpa]
gi|222873146|gb|EEF10277.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 26/179 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
L+ WG+++G P G P+ + + VSCG + L+E+G L
Sbjct: 141 RLWVWGQNQGSNY--------PRLFCGAFSPNTI------ICQVSCGAVHVVALSEDGLL 186
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPN----LVD-----VRIIQIANGGYHSLALTDDGK 111
WG N +LGRG G + + N +D V+I Q++ G YH+ A+++ G+
Sbjct: 187 QAWGYNEYGQLGRGFTCEGLQGARVINAYAKFLDEAPELVKITQVSCGEYHTAAISEKGE 246
Query: 112 VFSWGYGGHGQLGHSFTQN---QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
V++WG G GQLGH+ Q+ + +P + AL F+ +ACGG + A T+KG LY W
Sbjct: 247 VYTWGLGNMGQLGHTSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAATQKGALYAW 305
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 16/130 (12%)
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLV-------DVRIIQIANGGYHSLALTDDGK 111
++ WG N + + GR + G + PK LP + + R + IA G H+ A+ DG
Sbjct: 22 IYVWGYNQSGQTGRKGKDGQLRIPKQLPPELFGCPAGANARWLDIACGREHTAAVASDGS 81
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK--------GK 163
+F+WG GQLG ++K P ++ L EFV ++CG +AA+ E +
Sbjct: 82 LFTWGANEFGQLGDGTEDSRKYPKKVKQLETEFVKSVSCGAHCTAAIAEPRQNDGTILSR 141
Query: 164 LYMWGNAKDS 173
L++WG + S
Sbjct: 142 LWVWGQNQGS 151
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 94/247 (38%), Gaps = 73/247 (29%)
Query: 2 LYTWGRDEG--EGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAA----VSCGGFFTMVL 54
+Y WG ++ GR G G R P + +P ++ P A ++CG T +
Sbjct: 22 IYVWGYNQSGQTGRKGKDGQLRIPKQ-----LPPELFGCPAGANARWLDIACGREHTAAV 76
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY------------- 101
+G L+ WGAN +LG G PK + L + ++ G +
Sbjct: 77 ASDGSLFTWGANEFGQLGDGTEDSRKYPKKVKQLETEFVKSVSCGAHCTAAIAEPRQNDG 136
Query: 102 ---------------------------------------HSLALTDDGKVFSWGYGGHGQ 122
H +AL++DG + +WGY +GQ
Sbjct: 137 TILSRLWVWGQNQGSNYPRLFCGAFSPNTIICQVSCGAVHVVALSEDGLLQAWGYNEYGQ 196
Query: 123 LGHSFT----QNQKVPMVIEALADEF-----VTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
LG FT Q +V DE +T ++CG +AA++EKG++Y WG
Sbjct: 197 LGRGFTCEGLQGARVINAYAKFLDEAPELVKITQVSCGEYHTAAISEKGEVYTWGLGNMG 256
Query: 174 QLGVPGL 180
QLG L
Sbjct: 257 QLGHTSL 263
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK---PKLLPNLVDVRIIQ 95
V + VSCG + T ++E+G+++ WG + +LG G K P+ + L + I
Sbjct: 226 VKITQVSCGEYHTAAISEKGEVYTWGLGNMGQLGHTSLQSGDKELLPRRVVALDGIFIKD 285
Query: 96 IANGGYHSLALTDDGKVFSWGYGGH---------GQLGHSFTQNQKVPMVIEALA-DEFV 145
+A GG H+ A T G +++WG G G ++++ I AL V
Sbjct: 286 VACGGVHTCAATQKGALYAWGGGQAGQLGLGPQTGSFSFIPSESESFLRNIPALVVPTDV 345
Query: 146 THIACGGSTSAAVTEKGKLYMWG 168
H+ACG S + G+++ WG
Sbjct: 346 QHVACGHSHTLVSMRDGRIHGWG 368
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 16/175 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+YTWG G +G +P +V AL + + V+CGG T T++G
Sbjct: 246 EVYTWGL----GNMGQLGHTSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAATQKGA 301
Query: 60 LWNWGANSNYELGRGDRVGGW------KPKLLPNL----VDVRIIQIANGGYHSLALTDD 109
L+ WG +LG G + G + L N+ V + +A G H+L D
Sbjct: 302 LYAWGGGQAGQLGLGPQTGSFSFIPSESESFLRNIPALVVPTDVQHVACGHSHTLVSMRD 361
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
G++ WGY +GQ + + P ++ E V +A GG SA +T+ L
Sbjct: 362 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDACSL 415
>gi|57997475|emb|CAI46056.1| hypothetical protein [Homo sapiens]
Length = 900
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/147 (31%), Positives = 82/147 (55%), Gaps = 4/147 (2%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIA 97
+ + VSCG + ++ L+++ Q+++WG NS+ +LG G P+ + +L + + Q+A
Sbjct: 6 IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 65
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGST 154
GG HS AL+ G F WG GQL G + P+ + AL + V +I+CG +
Sbjct: 66 AGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAH 125
Query: 155 SAAVTEKGKLYMWGNAKDSQLGVPGLP 181
+A +T+ GK++ +G+ + QLG P
Sbjct: 126 TAVLTQDGKVFTFGDNRSGQLGYSPTP 152
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 99/175 (56%), Gaps = 12/175 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 26 QVFSWGKNS-HGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 79
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR V KP + L ++ ++ I+ G H+ LT DGKVF++G
Sbjct: 80 SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG 139
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNA 170
GQLG+S T ++ P ++E + D V+ I CG T A V G++ +G+
Sbjct: 140 DNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVVSFGHG 193
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ--LGHSFTQNQKVPMVIEALADEFV 145
L D++IIQ++ G YHSLAL+ D +VFSWG HGQ LG F +Q P + +L +
Sbjct: 3 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP-SQASPQRVRSLEGIPL 61
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--LPVVQPCPV 188
+A GG+ S A++ G + WG+ QL + G +PV P+
Sbjct: 62 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPL 106
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D II +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIIHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA 149
GQLG T N K P ++ A AD F HI
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYHIV 364
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D II +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIIHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA 149
GQLG T N K P ++ A AD F HI
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIV 364
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
Query: 19 GRGPNEAGGLSIPSKVK-ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV 77
G G + +S P +L V V+CGG T+ L E+GQ+++ G N +LG
Sbjct: 13 GNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHE- 71
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN-QKVPMV 136
G P + L + I IA G HSLAL+ G ++SWG G GQLGH+ ++ ++P +
Sbjct: 72 -GTHPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRI 130
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
I+ L+ + + ++CG A+ + G+L+ WG QLG+ + Q P
Sbjct: 131 IKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSP 181
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 92/179 (51%), Gaps = 8/179 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+TWG++ G+LGLG G S P KVK+L +P+A V+ GG + L+ G
Sbjct: 157 QLFTWGQNT-HGQLGLGNGFISQ-----SSPQKVKSLEGIPLAQVTAGGSHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG NS +LG D P + L +++ I+ G H+ LT G +F++G GG
Sbjct: 211 VFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH N+ P + L V+ IACG T A V G LY +G QLG
Sbjct: 271 SGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLGT 329
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 88/164 (53%), Gaps = 13/164 (7%)
Query: 38 PVPVAA--------VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNL 88
P PVA ++CG ++ L+ +G L++WGA ++ +LG + P+++ L
Sbjct: 75 PAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ--LGHSFTQNQKVPMVIEALADEFVT 146
+I Q++ G H LAL DDG++F+WG HGQ LG+ F +Q P +++L +
Sbjct: 135 SQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFI-SQSSPQKVKSLEGIPLA 193
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQ-PCPVE 189
+ GGS S A++ G ++ WG QLG+ V + PC V+
Sbjct: 194 QVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVK 237
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Query: 63 WGANSNYELGRGDRVGGW--KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG ++ +LG G + +P + + ++A GG H+L L +DG+V+S G+ G
Sbjct: 4 WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGE 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLGHS P + LA+E + HIACG S S A++ +G LY WG D QLG
Sbjct: 64 GQLGHSHEGTHPAP--VATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLG 117
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL N+ P VK L V +SCG T +LT+ G L
Sbjct: 211 VFGWGKNSA-GQLGL------NDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGL 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA + +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGD 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
GQLG N K P V++
Sbjct: 324 LGQLGTGHENNVKCPTVVK 342
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 97/177 (54%), Gaps = 9/177 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GRLG G P++ L IP ++AL + + +SCG + +T E +
Sbjct: 85 DVYSWGWGD-FGRLGHGD---PSD---LFIPHPIRALQGLRIKQISCGDCHCLAVTMENK 137
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N ELG G P+ + +RI +A G HS+A+T+DG ++ WG+G
Sbjct: 138 VLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGR 197
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG T ++ +P + D+ V ++CG + +++ G LY G +K QLG
Sbjct: 198 YGNLGLGDTNDRLIPEKVNIDGDKIVM-VSCGWRHTISISSSGGLYTHGWSKYGQLG 253
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ-LW 61
+WGR E +G+LG G + +P+K+ A + +V+CG +T+ ++ G+ ++
Sbjct: 35 SWGRGE-DGQLGHG------DTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVY 87
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG GD + P + L +RI QI+ G H LA+T + KV SWG +G
Sbjct: 88 SWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNG 147
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+LG T++ VP I A + +A G S A+TE G LY WG + LG+
Sbjct: 148 ELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGL 203
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 85/152 (55%), Gaps = 15/152 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ +WGR++ G LGLG + + +P K+ A + + V+ G ++ +TE+G
Sbjct: 137 KVLSWGRNQ-NGELGLGTTKDSH------VPQKILAFEGIRIKMVAAGAEHSVAITEDGD 189
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV---RIIQIANGGYHSLALTDDGKVFSWG 116
L+ WG LG GD +L+P V++ +I+ ++ G H+++++ G +++ G
Sbjct: 190 LYGWGWGRYGNLGLGDT----NDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHG 245
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ +GQLGH ++ VP ++AL+D+ ++ +
Sbjct: 246 WSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 277
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 28 LSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN 87
+ I S+ A P V +S G T+ L + +WG + +LG GD P L
Sbjct: 1 MMIMSEKSASPPHVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSA 60
Query: 88 LVDVRIIQIANGGYHSLALTDDGK-VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVT 146
I+ + G +++A + GK V+SWG+G G+LGH + +P I AL +
Sbjct: 61 FDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIK 120
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
I+CG AVT + K+ WG ++ +LG+
Sbjct: 121 QISCGDCHCLAVTMENKVLSWGRNQNGELGL 151
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D II +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIIHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA----CGGSTSAAVTEKGKL 164
GQLG T N K P ++ A AD F HI GG + + K +
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Query: 165 Y 165
Y
Sbjct: 384 Y 384
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D II +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIIHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA 149
GQLG T N K P ++ A AD F HI
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIV 364
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D II +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIIHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA 149
GQLG T N K P ++ A AD F HI
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIV 364
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D II +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIIHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA 149
GQLG T N K P ++ A AD F HI
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYHIV 364
>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
Length = 480
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL + +P +V + PV+ +SCG + + +T +G+L+
Sbjct: 161 LFMWG-DNSEGQIGL------KNVSNVCVPQQV-TIGKPVSWISCGYYHSAFVTTDGELY 212
Query: 62 NWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G N +LG +++ G P+L+ + + ++IQ+A GG H++ LT++ V+++G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 120 HGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P VIE + D+ +++I+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGN 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD ++ + +I Q++ G S ALT+DG++F WG
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + V+ I+CG SA VT G+LY++G ++ +LG+P
Sbjct: 168 SEGQIGLKNVSNVCVPQ--QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLP 225
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 2/146 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VPV +SCG + V+T +L+ +G+N+ +LG G + KP + L ++ A
Sbjct: 36 VPVH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAAC 94
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAA 157
G H+L T+ G V++ G GQLG T+ + VI E + ++ G +TSAA
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 158 VTEKGKLYMWGNAKDSQLGVPGLPVV 183
+TE G+L+MWG+ + Q+G+ + V
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNV 180
>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
Length = 1348
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 93/183 (50%), Gaps = 16/183 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLS-----------IPSKVKALPVPVAAVSCGGFF 50
L +WG +E G+LG GP R + G +P V + V +V+CG
Sbjct: 287 LLSWGNEEF-GQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGSGHVKFTSVACGAGH 345
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
T+ LT G+++++G + LG GDR+ P+L+ L V + QIA G HS +L+ G
Sbjct: 346 TLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVDALWGVGVAQIAAGDNHSASLSASG 405
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVT--HIACGGSTSAAVT--EKGKLYM 166
+V++WG G +G LGH N+ P ++AL D V IACGG + A+ G L
Sbjct: 406 RVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLA 465
Query: 167 WGN 169
WG
Sbjct: 466 WGR 468
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 94/198 (47%), Gaps = 28/198 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGR------GPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y +G GEG+ P R P E + + A+P VA V+CG +
Sbjct: 228 EVYAFGDCSGEGKALSAPTRLREAVIDPPE-----VTATTNAMP-RVATVACGQRHCAAV 281
Query: 55 TEEGQLWNWGANSNYELGRG---DRVGGWKPK----------LLPNLV---DVRIIQIAN 98
T G L +WG +LG+G D K ++P LV V+ +A
Sbjct: 282 TTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGSGHVKFTSVAC 341
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H+LALT +G+VFS+G G G LGH N VP +++AL V IA G + SA++
Sbjct: 342 GAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVDALWGVGVAQIAAGDNHSASL 401
Query: 159 TEKGKLYMWGNAKDSQLG 176
+ G++Y WG K LG
Sbjct: 402 SASGRVYTWGRGKYGALG 419
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 30 IPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P V AL V VA ++ G + L+ G+++ WG LG D +P + L
Sbjct: 376 VPRLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQAL 435
Query: 89 VD--VRIIQIANGGYHSLALTD--DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA--LAD 142
D VR QIA GG H+LA+ G + +WG G G G T + P +I+ L D
Sbjct: 436 DDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGD 495
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
E V I+ G S AVTE G +Y WG QLG
Sbjct: 496 EKVFQISAGSKHSVAVTEGGCVYTWGARTQGQLG 529
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTE- 56
+YTWGR G+ G G + S P+ V+AL V ++CGG T+ +
Sbjct: 406 RVYTWGR----GKYG---ALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDHTLAIAGG 458
Query: 57 -EGQLWNWGANSNYELGRGDRVGGWKPKLLPN--LVDVRIIQIANGGYHSLALTDDGKVF 113
G L WG S+ G G P ++ L D ++ QI+ G HS+A+T+ G V+
Sbjct: 459 GSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGSKHSVAVTEGGCVY 518
Query: 114 SWGYGGHGQLGHSF 127
+WG GQLGH
Sbjct: 519 TWGARTQGQLGHEL 532
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG-YGGHGQLGHSFTQNQKV---PMVI 137
P+ + +L + +A G HS+A+T G+V+++G G G+ + T+ ++ P +
Sbjct: 199 PRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEV 258
Query: 138 EALADEF--VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A + V +ACG AAVT G L WGN + QLG
Sbjct: 259 TATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLG 299
>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6-like [Ailuropoda melanoleuca]
Length = 1189
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 98/183 (53%), Gaps = 15/183 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G + N IP+K+K L + + VSCG + ++ L+E GQ
Sbjct: 95 RVFAWGAG-SEGQLGVGEFKEIN-----LIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQ 148
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG+NS+ +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 149 VFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSN 208
Query: 119 GHGQLGHSFTQNQ-----KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
GQL QN P I AL + V +I+CG +A +T+ GK++ +G
Sbjct: 209 NAGQLA--LRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYG 266
Query: 174 QLG 176
QLG
Sbjct: 267 QLG 269
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 99/181 (54%), Gaps = 12/181 (6%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
EL++ G D +G+LG G R + P +++ L + V VSCG ++ + +G
Sbjct: 43 ELHSCG-DNSQGQLGRKGVQRDEH-------PKRIRTLDNLRVDLVSCGKEHSLAVCYKG 94
Query: 59 QLWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+++ WGA S +LG G+ + P + L ++IIQ++ G YHSLAL++ G+VFSWG
Sbjct: 95 RVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGS 154
Query: 118 GGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
HGQLG +Q P + +L +T +A GG+ S A++ G + WG+ QL
Sbjct: 155 NSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLA 214
Query: 177 V 177
+
Sbjct: 215 L 215
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 12/174 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG + G+LGLG P++A P +V++L +P+ V+ GG + L+ G
Sbjct: 148 QVFSWGSN-SHGQLGLG-KECPSQAS----PQRVRSLDGIPLTQVAAGGAHSFALSLSGA 201
Query: 60 LWNWGANSNYELGRGDR---VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+N+ +L V KP+ + L ++ +I I+ G H+ LT GKVF++G
Sbjct: 202 SFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGN 169
+GQLGHS T ++ P ++E + D V+ I CG T A V GK+ +G
Sbjct: 262 GNSYGQLGHSPTAEKEGPQLVEGI-DGLVSQIDCGSYHTLAYVYTTGKVVSFGR 314
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L G+L + G NS +LGR PK + L ++R+ ++ G HSLA+ G
Sbjct: 35 SLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDLVSCGKEHSLAVCYKG 94
Query: 111 KVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + +P I+ L + ++CG S A++E G+++ WG+
Sbjct: 95 RVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGS 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%)
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
Q A+G HSL L +G++ S G GQLG Q + P I L + V ++CG
Sbjct: 27 QAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDLVSCGKEH 86
Query: 155 SAAVTEKGKLYMWGNAKDSQLGV 177
S AV KG+++ WG + QLGV
Sbjct: 87 SLAVCYKGRVFAWGAGSEGQLGV 109
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D II +A G
Sbjct: 40 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIIHVACGE 97
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 98 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 157
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 158 ADGQFFTWGKNSHGQLGL 175
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 108 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 161
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 162 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 221
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 222 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 279
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 161 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 214
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 215 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 274
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 275 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 334
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 335 HTCNVKCPSPVK 346
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 58 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 108
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 109 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 166
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 167 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 225
Query: 175 LGV 177
LG+
Sbjct: 226 LGL 228
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 28 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 85
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 86 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 122
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 215 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 267
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 268 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 327
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA----CGGSTSAAVTEKGKL 164
GQLG T N K P ++ A AD F HI GG + + K +
Sbjct: 328 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 387
Query: 165 Y 165
Y
Sbjct: 388 Y 388
>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 826
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 95/177 (53%), Gaps = 10/177 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ- 59
ELYTWG E GRLG N P+KV+++ V V+CGG T+ ++++G+
Sbjct: 555 ELYTWGDGEF-GRLGHDYTSSKN------FPTKVQSIE-SVGLVACGGSHTLAVSQDGKT 606
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W++G N +LG GD KPK++ L + I ++A G SLA+T G++++WG G
Sbjct: 607 IWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGA 666
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S P ++E L + + IACG S A+T + ++Y WGN Q G
Sbjct: 667 ILGCG-SAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCG 722
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV--PVAAVSCGGFFTMVLTEEG 58
E+Y+WG D G+LG G IP VK V V VS G + +TE+G
Sbjct: 502 EVYSWG-DGDYGKLGHGTHSTQK------IPKLVKGPLVGKVVKCVSAGYRHSAAVTEDG 554
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGY 117
+L+ WG LG P + ++ V ++ A GG H+LA++ DGK ++S+G
Sbjct: 555 ELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGLV--ACGGSHTLAVSQDGKTIWSFGG 612
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G +G+LGH T Q P VIEAL ++ +ACG +S AVT G+LY WG
Sbjct: 613 GENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWG 663
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
Query: 33 KVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKL-LPNLVDV 91
K A+ V G F T ++ +G + G S LG GD PK L + V
Sbjct: 422 KYSAVFTDCQQVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKKPLFDKKYV 481
Query: 92 RIIQIANGGY-HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIA 149
+ I + G HSLALT G+V+SWG G +G+LGH QK+P +++ L + V ++
Sbjct: 482 KKISSSKGSDGHSLALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVS 541
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G SAAVTE G+LY WG+ + +LG
Sbjct: 542 AGYRHSAAVTEDGELYTWGDGEFGRLG 568
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Query: 31 PSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P ++AL + + V+CG ++ +T GQL+ WG + G + +P+L+ +L
Sbjct: 629 PKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILGCGSAEYTA-LRPRLVEDLQ 687
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV-PMVIEALADEFVTHI 148
R++ IA G H +ALT + +V++WG GQ G Q+ P + L V +
Sbjct: 688 SKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQGHAQSPITRPKRVIGLDGVSVHQV 747
Query: 149 ACGGSTSAAVT 159
+ G S S A T
Sbjct: 748 SAGTSHSVAWT 758
>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
Length = 425
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGG--WKPKLLPNL 88
P +V V VS G + +T +G+L+ WG NS+ +LG G R G P+ + L
Sbjct: 117 PIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCL 176
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH---------SFTQNQKVPMVIEA 139
D R+ +A G HS+A T++G+V SWG G G+LGH S T ++ P +I+
Sbjct: 177 ADARVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKN 236
Query: 140 LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
L + IA G SA + EKG L+++G + G G ++P VE
Sbjct: 237 LDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSG-DELRPTVVE 285
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 19/194 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+ WGR+ G+LGLG G +S P KV L V V+ G ++ TEEG+
Sbjct: 145 KLFAWGRNS-SGQLGLGKRAGKV----VSTPRKVDCLADARVKMVALGSEHSIATTEEGE 199
Query: 60 LWNWGANSNYELGRGDRVG---------GWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+ +WGA LG G + + P+L+ NL V+I +IA G HS + + G
Sbjct: 200 VLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKG 259
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+F +G G S ++ P V+E + F +ACGG + VT+ G LY WG+
Sbjct: 260 TLFIFGQKTEKGFGRS--GDELRPTVVEEVP--FSEEVACGGYHTCVVTDSGDLYSWGSN 315
Query: 171 KDSQLGVPGLPVVQ 184
++ LG+ G +V+
Sbjct: 316 ENGCLGLGGTDMVR 329
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Query: 42 AAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY 101
A+++CGG T+ LTE G+++ G N +LG G V + + D ++++++ G +
Sbjct: 76 ASLACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNH 135
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAAVT 159
HS A+T DGK+F+WG GQLG + V P ++ LAD V +A G S A T
Sbjct: 136 HSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATT 195
Query: 160 EKGKLYMWGNAKDSQLG 176
E+G++ WG A +LG
Sbjct: 196 EEGEVLSWGAAGAGRLG 212
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 13/142 (9%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD 90
P+ V+ +P V+CGG+ T V+T+ G L++WG+N N LG G P++L + +
Sbjct: 281 PTVVEEVPFS-EEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLF 339
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGH------------GQLGHSFTQNQKVPMVIE 138
+ + G+ A+ G +++WG+GG GQLGH + PM++E
Sbjct: 340 KFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVE 399
Query: 139 ALADEFVTHIACGGSTSAAVTE 160
+ H++CG + + A+ E
Sbjct: 400 FGKNARAVHVSCGFNHTGAIFE 421
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVR--------IIQIANGGYHSLALTDDGKVFS 114
WG LG G W P P + R +A GG H+L LT+ G+VF+
Sbjct: 37 WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G GQLG + + + + DE V ++ G S AVT GKL+ WG Q
Sbjct: 97 AGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQ 156
Query: 175 LGV 177
LG+
Sbjct: 157 LGL 159
>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
GTPase regulator, partial [Callithrix jacchus]
Length = 817
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL PN +P +V + PV+ +SCG + + +T +G+L+
Sbjct: 161 LFMWG-DNSEGQIGL-----PNILNA-CVPHQV-TIGKPVSWISCGYYHSAFVTTDGELY 212
Query: 62 NWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G + N +LG + + P+L+P + + ++IQ+A GG HS+ LT+D V+++G G
Sbjct: 213 IFGESENGKLGLPNELLSNHRIPQLVPEIPE-KVIQVACGGEHSVVLTEDA-VYTFGLGQ 270
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + P V+E + ++ +++I+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 271 FGQLGLGTLLFETSEPKVVENIGNKTISYISCGENHAALLTDNGLMYTFGDGRHGKLGL 329
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 63/182 (34%), Positives = 95/182 (52%), Gaps = 15/182 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G
Sbjct: 55 KLYVFGSNNW-GQLGLG------SKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTEGGN 107
Query: 60 LWNWGANSNYELGRGD---RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
++ G N +LG GD R + + +I Q++ G S ALT+DG++F WG
Sbjct: 108 VYATGGNDEGQLGLGDTEERTTFHRVSFFTS--QHKIKQLSAGSNTSAALTEDGRLFMWG 165
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G N VP + + V+ I+CG SA VT G+LY++G +++ +LG
Sbjct: 166 DNSEGQIGLPNILNACVPH--QVTIGKPVSWISCGYYHSAFVTTDGELYIFGESENGKLG 223
Query: 177 VP 178
+P
Sbjct: 224 LP 225
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
+SCG + V+T +L+ +G+N+ +LG G + KP + L ++ A G H+
Sbjct: 40 LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKG 162
L T+ G V++ G GQLG T+ + + + + ++ G +TSAA+TE G
Sbjct: 100 LVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQHKIKQLSAGSNTSAALTEDG 159
Query: 163 KLYMWGNAKDSQLGVPGL 180
+L+MWG+ + Q+G+P +
Sbjct: 160 RLFMWGDNSEGQIGLPNI 177
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 13/157 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEA-GGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELY +G E G+LGL PNE IP V +P V V+CGG ++VLTE+
Sbjct: 210 ELYIFGESE-NGKLGL-----PNELLSNHRIPQLVPEIPEKVIQVACGGEHSVVLTEDA- 262
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ +G +LG G + +PK++ N+ + I I+ G H+ LTD+G ++++G G
Sbjct: 263 VYTFGLGQFGQLGLGTLLFETSEPKVVENIGNKTISYISCGENHAALLTDNGLMYTFGDG 322
Query: 119 GHGQLG---HSFTQNQKVPMVIEALADEFVTHIACGG 152
HG+LG +FT NQ P + V +ACGG
Sbjct: 323 RHGKLGLGLENFT-NQFTPTLCCNFLKFVVKLVACGG 358
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
+ ++ G HS +T + K++ +G GQLG P ++AL E V ACG +
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRN 97
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGV 177
+ TE G +Y G + QLG+
Sbjct: 98 HTLVSTEGGNVYATGGNDEGQLGL 121
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Felis catus]
Length = 4861
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P V+EAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3998 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4048
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4168
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4057 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4221
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4209 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4263 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4322
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4323 LGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4359
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4154 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4206
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4266
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4267 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4325
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 316
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 9/177 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GRLG G + L IP ++AL + + +SCG + +T E +
Sbjct: 122 DVYSWGWGD-FGRLGHG------DPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENK 174
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N ELG G P+ + +RI +A G HS+A+T+DG ++ WG+G
Sbjct: 175 VLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGR 234
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG T ++ +P + D+ V ++CG + +++ G LY G +K QLG
Sbjct: 235 YGNLGLGDTNDRLIPEKVNIDGDKIVM-VSCGWRHTISISSSGGLYTHGWSKYGQLG 290
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ-LW 61
+WGR E +G+LG G + +P+K+ A + +V+CG +T+ ++ G+ ++
Sbjct: 72 SWGRGE-DGQLGHG------DTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVY 124
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG GD + P + L +RI QI+ G H LA+T + KV SWG +G
Sbjct: 125 SWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNG 184
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+LG T++ VP I A + +A G S A+TE G LY WG + LG+
Sbjct: 185 ELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGL 240
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 85/152 (55%), Gaps = 15/152 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ +WGR++ G LGLG + + +P K+ A + + V+ G ++ +TE+G
Sbjct: 174 KVLSWGRNQ-NGELGLGTTKDSH------VPQKILAFEGIRIKMVAAGAEHSVAITEDGD 226
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV---RIIQIANGGYHSLALTDDGKVFSWG 116
L+ WG LG GD +L+P V++ +I+ ++ G H+++++ G +++ G
Sbjct: 227 LYGWGWGRYGNLGLGDT----NDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHG 282
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ +GQLGH ++ VP ++AL+D+ ++ +
Sbjct: 283 WSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 314
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK-LYMWG 168
V SWG G GQLGH T ++ +P + A + + + CG + A ++ GK +Y WG
Sbjct: 70 VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWG 127
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P V+EAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 4007 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4057
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4058 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4117
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4118 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4177
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4066 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4122
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4123 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4182
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4183 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4230
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4218 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4271
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4272 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4331
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4332 LGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4368
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4163 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4215
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4216 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4275
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4276 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4334
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
Length = 910
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 13/163 (7%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
+L+TWG D + RLG G P P L + ++CG T+ LT
Sbjct: 267 KLFTWG-DGDKHRLGHGDKEPRLKPTCVASL--------IDYDFHRIACGHSLTVGLTTS 317
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++ + G +LG R G P L+ +V ++Q+A G YH LT +VF+WG
Sbjct: 318 GKVLSMGNTVYGQLG-NPRSDGKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGK 376
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
G +G+LGH +++K+P ++EAL D V HIACG + +AA+ +
Sbjct: 377 GANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFTAAICQ 419
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 20/203 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVK-ALP-VPVAAVSCGGFFTMVLTEE 57
ELYTWG +G +GL G G+ + IP ++ AL + VA VSCG + T ++T
Sbjct: 149 ELYTWG--DGTHNVGLLGHGKDVSHW----IPKRIAGALEGLAVAYVSCGTWHTALITTM 202
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G + LG G+R PK + +L ++ I +A G +H+ A+ +
Sbjct: 203 GQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSS 262
Query: 109 --DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
GK+F+WG G +LGH + + P + +L D IACG S + +T GK+
Sbjct: 263 ISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTSGKVLS 322
Query: 167 WGNAKDSQLGVPGLPVVQPCPVE 189
GN QLG P PC VE
Sbjct: 323 MGNTVYGQLGNPRSDGKIPCLVE 345
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 98/188 (52%), Gaps = 20/188 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G +G G+ G G E+ +S P +V++L + +V+CG + T + E
Sbjct: 204 QLFTFG----DGTFGV-LGHGNRES--ISCPKEVESLSGLKTISVACGVWHTAAIVEVIV 256
Query: 57 --------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+L+ WG + LG GD+ KP + +L+D +IA G ++ LT
Sbjct: 257 TQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTT 316
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GKV S G +GQLG+ + + K+P ++E + E V +ACG A +T K +++ WG
Sbjct: 317 SGKVLSMGNTVYGQLGNPRS-DGKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWG 375
Query: 169 NAKDSQLG 176
+ +LG
Sbjct: 376 KGANGRLG 383
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 22/191 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
E++TWG + G GRLG G P +++L V V V+CG F T +T G+
Sbjct: 97 EVFTWGEESG-GRLGHGSREDSIH------PRLIESLAVCNVDIVACGEFHTCAVTTAGE 149
Query: 60 LWNWGANSNYE--LGRGDRVGGWKPKLLPNLVD-VRIIQIANGGYHSLALTDDGKVFSWG 116
L+ WG ++ LG G V W PK + ++ + + ++ G +H+ +T G++F++G
Sbjct: 150 LYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFG 209
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE-----------KGKLY 165
G G LGH ++ P +E+L+ +ACG +AA+ E GKL+
Sbjct: 210 DGTFGVLGHGNRESISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLF 269
Query: 166 MWGNAKDSQLG 176
WG+ +LG
Sbjct: 270 TWGDGDKHRLG 280
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 6/139 (4%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
V CG + ++T+ G+++ WG S LG G R P+L+ +L + +A G +H+
Sbjct: 82 VDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHT 141
Query: 104 LALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTE 160
A+T G++++WG G H G LGH + +P I AL V +++CG +A +T
Sbjct: 142 CAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITT 201
Query: 161 KGKLYMWGNAKDSQLGVPG 179
G+L+ +G D GV G
Sbjct: 202 MGQLFTFG---DGTFGVLG 217
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%)
Query: 76 RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
R +PK L + + + + G HS +T +G+VF+WG G+LGH ++ P
Sbjct: 62 RTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPR 121
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+IE+LA V +ACG + AVT G+LY WG+
Sbjct: 122 LIESLAVCNVDIVACGEFHTCAVTTAGELYTWGD 155
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P V+EAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3998 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4048
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4168
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4057 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4221
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4209 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4263 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4322
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4323 LGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4359
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4154 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4206
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4266
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4267 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4325
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|145354694|ref|XP_001421613.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581851|gb|ABO99906.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 390
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 85/168 (50%), Gaps = 7/168 (4%)
Query: 9 EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
E E R P R A L P+++ LP V+AVSCGG + L +G+++ WG S
Sbjct: 132 EAEARSAAIPDRDWAPARALISPARMIPLPFAVSAVSCGGMSSFALLRDGRVFEWGLTSE 191
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
E R +P LP L D +++IA G +H L T +G+V S+G G +GQLG
Sbjct: 192 EEEPRE------EPAHLPTL-DKHVVEIAAGSFHLLMRTRNGEVLSYGNGMYGQLGLGAF 244
Query: 129 QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
P VIE V IA GG SAAVT G LY WG + +LG
Sbjct: 245 SAADKPRVIETFGRVGVAKIAAGGWHSAAVTAGGLLYTWGRGEYGRLG 292
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG E +G+LGL R + A S +A P A +CG +M T G+L+
Sbjct: 2 LFAWGCGE-DGQLGLDDAR--STARERCAASPRRATP---RAPACGSRNSMCATTTGELY 55
Query: 62 NWGANSNYELGRG----DRVGGWKPKLLPNLV-----DVRIIQIANGGYHSLALTDDGKV 112
WG NS+ L G D + P+ V + + A+GG+H+L + DG V
Sbjct: 56 AWGWNSHRALSFGWQECDALFVDAPRRSRLEVGEGGRRLEVAAAASGGWHALCVDADGAV 115
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVI--------EALADE--------FVTHIACGGSTSA 156
+ WG + Q G + + + I AL V+ ++CGG +S
Sbjct: 116 WGWGGNEYAQAGRADAEAEARSAAIPDRDWAPARALISPARMIPLPFAVSAVSCGGMSSF 175
Query: 157 AVTEKGKLYMWG 168
A+ G+++ WG
Sbjct: 176 ALLRDGRVFEWG 187
Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 21/119 (17%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV---KALPVPVAAVSCGGFFTMVLTEEG 58
LYTWGR E GRLG G ++ +P V + +A V+ GG + +T EG
Sbjct: 280 LYTWGRGE-YGRLGHG-----DDCKDKVVPQLVDLGEDESNFIADVALGGSHSCAITCEG 333
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKL----------LPNLVDVRIIQIANGGYHSLALT 107
+ +WG N+ LGR V P LP R+ +I+ GG H+LA+
Sbjct: 334 HVLSWGRNTLGRLGR--VVSDPSPSCGHPGRVVFPPLPGGRFWRVDKISCGGRHTLAVA 390
>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
Length = 546
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 12/180 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEG 58
L+TWG D EG+LG N+ IP+ V A +PVAA GG T+VL G
Sbjct: 345 LFTWG-DGKEGKLG------HNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRG 397
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
Q++++G+ + LG G+ W P L L R + IA G HS+ALTD G++++WG G
Sbjct: 398 QVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCG 457
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHI--ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LGH ++ +P + ++ + + I A G + + +G L G ++
Sbjct: 458 KLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMA 517
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+YTWG +GR G LG G ++ IP V + V +VS G + T+ +T G L
Sbjct: 294 VYTWG----QGRYGQLGHGDDVDKI----IPQPVPRIKGEVKSVSAGFYHTVAVTHHGAL 345
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG +LG D P L+ ++ + + GG H+L L G+VFS+G G
Sbjct: 346 FTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSG 405
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LGH +Q P + AL E IA G + S A+T++G++Y WG K +LG
Sbjct: 406 DSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLG 463
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V +A+S G +T+ G ++ WG +LG GD V P+ +P + + ++
Sbjct: 273 VVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPR-IKGEVKSVSA 331
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD--EFVTHIACGGSTSA 156
G YH++A+T G +F+WG G G+LGH+ + +P ++ A + V GGS +
Sbjct: 332 GFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTL 391
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
+ +G+++ +G+ +LG
Sbjct: 392 VLNRRGQVFSFGSGDSGRLG 411
>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
Length = 646
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL + +P +V + PV+ +SCG + + +T +G+L+
Sbjct: 161 LFMWG-DNSEGQIGL------KNVSNVCVPQQV-TIGKPVSWISCGYYHSAFVTTDGELY 212
Query: 62 NWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G N +LG +++ G P+L+ + + ++IQ+A GG H++ LT++ V+++G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 120 HGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P VIE + D+ +++I+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 95/181 (52%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G
Sbjct: 55 KLYMFGSNNW-GQLGLGS------KSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGN 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD ++ + +I Q++ G S ALT+DG++F WG
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + V+ I+CG SA VT G+LY++G ++ +LG+P
Sbjct: 168 SEGQIGLKNVSNVCVPQ--QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLP 225
Query: 179 G 179
Sbjct: 226 N 226
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 2/146 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VPV +SCG + V+T +L+ +G+N+ +LG G + KP + L ++ A
Sbjct: 36 VPVH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAAC 94
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAA 157
G H+L T+ G V++ G GQLG T+ + VI E + ++ G +TSAA
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 158 VTEKGKLYMWGNAKDSQLGVPGLPVV 183
+TE G+L+MWG+ + Q+G+ + V
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNV 180
>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
Length = 2141
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/181 (31%), Positives = 87/181 (48%), Gaps = 12/181 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVK-----ALPVPVAAVSCGGFFTMVLTE 56
+Y+WG LG G G E P+ +K L + ++CG + L
Sbjct: 273 VYSWG-------LGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDH 325
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+G +++WG LG GD G PK + L +I+ I G S A++ ++F WG
Sbjct: 326 QGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEGSSAAISIKNELFIWG 385
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G HG+LG T N P+++E L D+ V IA G + S + GK WG++KD +LG
Sbjct: 386 VGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNGKAMCWGSSKDGKLG 445
Query: 177 V 177
+
Sbjct: 446 L 446
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG +G GRLG G G N IP ++ L + + G + ++ + +L
Sbjct: 329 VYSWGNGQG-GRLGHGDETGEN------IPKEIIGLRQYKILMIEAGEGSSAAISIKNEL 381
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G KP +L +L D ++ IA G HSL + +GK WG
Sbjct: 382 FIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNGKAMCWGSSKD 441
Query: 121 GQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG + +N P + L E + IA G S A+TE G++Y +GN+KD +LG
Sbjct: 442 GKLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSKDGKLG 499
Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 2 LYTWGRDEGEGRLGLGPG--------RGPNEAGGLSIPSKVK-ALPVPVAAVSCGGFFTM 52
++TWG EGRLG+ + NE PS VK + + VSCG FT+
Sbjct: 208 VFTWGV-VNEGRLGIALNEKEIENIEQKNNELIPFK-PSIVKFDASIIIIKVSCGNSFTL 265
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ----IANGGYHSLALTD 108
L++EG +++WG ++ LG+G++ P ++ + + Q IA G H L+L
Sbjct: 266 ALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDH 325
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G V+SWG G G+LGH + +P I L + I G +SAA++ K +L++WG
Sbjct: 326 QGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEGSSAAISIKNELFIWG 385
Query: 169 NAKDSQLG 176
+LG
Sbjct: 386 VGLHGRLG 393
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 76/176 (43%), Gaps = 38/176 (21%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG--DRVGGWKPKLLPNLVDVRI 93
A+ + + VS G F + +T EG + WG N N +LG G D V KP + +L D I
Sbjct: 672 AVQMKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVS-KPTRIKSLQDKVI 730
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-------------------------- 127
I A+G HSL L+D G+V G+ G+LG
Sbjct: 731 IMTASGESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLI 790
Query: 128 -TQNQKVPMVIEALADEFVTHIACGGSTSAAV-----TEKG-KLYMWGNAKDSQLG 176
T+ + P +I+ L E + IA G + S A+ EK KL+ WG Q G
Sbjct: 791 ETKIELTPKIIKGL--ESIGFIAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTG 844
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 40/200 (20%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGG-FFTMVLTEEGQLW 61
+ WGR++ G+LG+G + +S P+++K+L V ++ G ++ L++ G++
Sbjct: 697 FGWGRND-NGQLGMG-----RKDTVVSKPTRIKSLQDKVIIMTASGESHSLFLSDLGEVL 750
Query: 62 NWGANSNYELGRG--DRVGGWKPKLLPN----------LVDVRI------IQ-------I 96
G N ELG G GG K P+ L++ +I I+ I
Sbjct: 751 CSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKIELTPKIIKGLESIGFI 810
Query: 97 ANGGYHSLAL------TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE--ALADEFVTHI 148
A G HS+A+ K+F+WG G HGQ GH QN +P +++ L D
Sbjct: 811 AAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQA 870
Query: 149 ACGGSTSAAVTEKGKLYMWG 168
+CG + A+ G ++ +G
Sbjct: 871 SCGSKHTIALDTTGHIWFFG 890
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 48/216 (22%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG GRLG G + + P ++ L V ++ G ++ + G+
Sbjct: 380 ELFIWGVGL-HGRLGTG------KTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNGK 432
Query: 60 LWNWGANSNYELGRG---DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
WG++ + +LG DR +PK L L ++ QIA G +HS+ALT++G+++S+G
Sbjct: 433 AMCWGSSKDGKLGLETALDR-NFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFG 491
Query: 117 YGGHGQLGH-SFTQNQKVPMVIE------------------ALADEF------------- 144
G+LG+ N ++P I L ++F
Sbjct: 492 NSKDGKLGYDEIKGNVQIPRKITNCPIFARKTGLNDRRDKYQLFNQFDDQMTVISNNQQL 551
Query: 145 ----VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V CG +++ + G++Y+ G+ K QLG
Sbjct: 552 GGCEVIQAQCGFNSTVFLLNDGQMYVCGSNKYGQLG 587
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN-QKVPMVIEALADEFVTH 147
V ++I ++ G +H LA+T +G F WG +GQLG P I++L D+ +
Sbjct: 673 VQMKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIM 732
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
A G S S +++ G++ G + +LG+
Sbjct: 733 TASGESHSLFLSDLGEVLCSGFNEFGELGI 762
Score = 44.7 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLL--PNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+L+ WG + + G G + P+++ P L D + IQ + G H++AL G ++ +G
Sbjct: 831 KLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFG 890
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALA--DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
Y + + Q +P +E + E I+ G + AVT+ G +Y +G +++
Sbjct: 891 YKPSVGIEDFNDEKQFMPARLETPSKIQEPFKFISSGEEHNLAVTQSGLVYGFGKNTNTK 950
Query: 175 L 175
+
Sbjct: 951 I 951
Score = 42.4 bits (98), Expect = 0.082, Method: Composition-based stats.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 21/185 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPV------AAVSCGGFFTMVL 54
+L+TWG G+ G G + +P VK VPV SCG T+ L
Sbjct: 831 KLFTWGCG-WHGQTGHGSWQND------YLPQIVK---VPVLKDTKFIQASCGSKHTIAL 880
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL--PNLVDVRIIQIANGGYHSLALTDDGKV 112
G +W +G + + + + P L P+ + I++G H+LA+T G V
Sbjct: 881 DTTGHIWFFGYKPSVGIEDFNDEKQFMPARLETPSKIQEPFKFISSGEEHNLAVTQSGLV 940
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+ +G + ++ S + V +E ACG + S + KG Y WG +
Sbjct: 941 YGFGKNTNTKINSSHKEYLYFDQVEN---EEKAVLTACGANHSVLIDTKGVPYTWGFVGN 997
Query: 173 SQLGV 177
+ G+
Sbjct: 998 GRCGL 1002
Score = 40.4 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 13/81 (16%)
Query: 109 DGKVFSWGYGGHGQLGHSFTQ----------NQKVPM---VIEALADEFVTHIACGGSTS 155
+G VF+WG G+LG + + N+ +P +++ A + ++CG S +
Sbjct: 205 NGIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFT 264
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
A++++G +Y WG LG
Sbjct: 265 LALSQEGHVYSWGLGNSGGLG 285
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 96/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 151 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 204
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF+WG
Sbjct: 205 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMN 264
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 265 NAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 322
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 4/174 (2%)
Query: 6 GRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWG 64
G++ G PG N G ++ P + V V+CGG ++ L E+G+++ G
Sbjct: 47 GKENGNDLGASQPGISTNLRGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 106
Query: 65 ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
N+ +LG +R G KP+ + L D I+ +A G HSLAL+D G++FSWG G GQLG
Sbjct: 107 LNTKGQLGH-EREGN-KPEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLG 164
Query: 125 HSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
T++ VP +I+ L + + ++CG A+ G+ + WG QLG+
Sbjct: 165 LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 218
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 204 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 257
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 258 VFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 317
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 318 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 377
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 378 HTCNVKCPSPVK 389
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + + V+CG ++ L++ GQ
Sbjct: 101 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQN--------IVHVACGESHSLALSDRGQ 151
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 152 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 209
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 210 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQ 268
Query: 175 LGV 177
LG+
Sbjct: 269 LGL 271
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL P VK L V +SCG T VLT+ G +
Sbjct: 258 VFAWGMNNA-GQLGLSDEEDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 310
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 311 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 370
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA 149
GQLG T N K P ++ A AD F HI
Sbjct: 371 RGQLGTGHTCNVKCPSPVKGYWAAHNGQLSARADRFKYHIV 411
>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Loxodonta africana]
Length = 1100
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG D EG++GL N + +P +V + P++ +SCG + + +T EG+L
Sbjct: 156 ELFMWG-DNSEGQIGL------NSISNVYVPRQV-TVGKPISWISCGYYHSAFVTMEGKL 207
Query: 61 WNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G +LG + KP+L+ + + ++IQ+A GG H++ LT+ V+++G G
Sbjct: 208 YTFGEPECGKLGLPSEQLINHRKPQLVSGISE-KVIQVACGGGHTVVLTEKA-VYTFGQG 265
Query: 119 GHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG SF P ++E + D+ + HI+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 266 RFGQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTALITDVGHMYTFGDGRHGKLGL 325
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 11/185 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG + P VKAL V +CG T+V TE G
Sbjct: 51 KLYMFGSNNW-GQLGLGS------KSAVYRPICVKALKSEKVKLAACGRNHTLVSTEGGN 103
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD L+ +I Q++ G S ALT+DG++F WG
Sbjct: 104 VYATGGNNEGQLGLGDTEERNSFHLISFFTSRHKIKQLSAGANISAALTEDGELFMWGDN 163
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G + N VP + + ++ I+CG SA VT +GKLY +G + +LG+P
Sbjct: 164 SEGQIGLNSISNVYVPRQV--TVGKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLGLP 221
Query: 179 GLPVV 183
++
Sbjct: 222 SEQLI 226
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 29 SIPSKV-KALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN 87
+IPSK VP+ +SCG T ++T +L+ +G+N+ +LG G + ++P +
Sbjct: 21 NIPSKFWFKNDVPIY-LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKA 79
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VT 146
L ++ A G H+L T+ G V++ G GQLG T+ + +I +
Sbjct: 80 LKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTSRHKIK 139
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVV 183
++ G + SAA+TE G+L+MWG+ + Q+G+ + V
Sbjct: 140 QLSAGANISAALTEDGELFMWGDNSEGQIGLNSISNV 176
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 86/157 (54%), Gaps = 13/157 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+LYT+G E G+LGL + N P V + V V+CGG T+VLTE+ +
Sbjct: 206 KLYTFGEPEC-GKLGLPSEQLINHRK----PQLVSGISEKVIQVACGGGHTVVLTEKA-V 259
Query: 61 WNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G +LG G + +P +L ++ D +I I+ G H+ +TD G ++++G G
Sbjct: 260 YTFGQGRFGQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTALITDVGHMYTFGDGR 319
Query: 120 HGQLG---HSFTQNQKVPMVIEALADEFVTH-IACGG 152
HG+LG +FT NQ VP + + +F+ H +ACGG
Sbjct: 320 HGKLGLGLENFT-NQFVPTLCSHFS-KFIIHLVACGG 354
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + GRLG G + L P +KAL + + ++CG + +T EG+
Sbjct: 81 EVYSWGWGD-FGRLGHG------NSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGE 133
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G P+ + + I +A G H+ A+T+DG++F WG+G
Sbjct: 134 VQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGR 193
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + ++ + + +ACG + +V+ G LY +G +K QLG
Sbjct: 194 YGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLG 250
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 100/177 (56%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG +P K++A + + V+ G T +TE+G+
Sbjct: 133 EVQSWGRNQ-NGQLGLGTTEDS------LVPQKIQAFEGISIKMVAAGAEHTAAVTEDGE 185
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + ++ +++ +A G H+++++ G ++++G+
Sbjct: 186 LFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSK 245
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH +++ VP +EAL + ++ I+ G + A+T GKLY WG K Q+G
Sbjct: 246 YGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVG 302
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P +++AL ++ +S G TM LT +G+L+ WG N ++G GD + P +
Sbjct: 259 VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFP 318
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
D ++IQI+ G H+LA+TD VFSWG G +GQLGH + ++ PM++EAL+
Sbjct: 319 QDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEALS 371
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG G LGLG + +P KV ++ + V+CG T+ ++ G
Sbjct: 185 ELFGWGWGR-YGNLGLG------DRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGG 237
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P L L I QI+ G H++ALT DGK++ WG+
Sbjct: 238 LYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNK 297
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G + P+ I+ D+ V I+CG + AVT+K ++ WG + QLG
Sbjct: 298 FGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLG 354
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLT-EEGQLW 61
+WGR E +G+LG G +A P+++ AL + +V+CG T + +++
Sbjct: 31 SWGRGE-DGQLGHG------DAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTEVY 83
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ PK + L ++I QIA G H LA+T +G+V SWG +G
Sbjct: 84 SWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNG 143
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+A + +A G +AAVTE G+L+ WG + LG+
Sbjct: 144 QLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGL 199
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V +S G ++ L + +WG + +LG GD P L L I+ + G
Sbjct: 10 VLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA 69
Query: 101 YHSLALT-DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
H+ A + +V+SWG+G G+LGH + + P I+AL + IACG S AVT
Sbjct: 70 DHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVT 129
Query: 160 EKGKLYMWGNAKDSQLGV 177
+G++ WG ++ QLG+
Sbjct: 130 MEGEVQSWGRNQNGQLGL 147
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
R++ I+ G HS+AL V SWG G GQLGH +++ P + AL + + CG
Sbjct: 9 RVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 68
Query: 152 GS-TSAAVTEKGKLYMWG 168
T+A + ++Y WG
Sbjct: 69 ADHTTAYSVARTEVYSWG 86
>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
Length = 901
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 1 ELYTWGR-DEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTE 56
+LYTWG G LG G NE +P +V P + V+A+SCG + T ++T
Sbjct: 382 DLYTWGNGTSNSGLLGHG-----NEVSHW-VPKRVNG-PLEGIHVSAISCGPWHTAIVTS 434
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD-------- 108
GQL+ +G S LG GDR P+ + +L +R ++ A G +H+ A+ +
Sbjct: 435 AGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 494
Query: 109 ----DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
GK+F+WG G G+LGH + VP + AL + IACG + A+T G +
Sbjct: 495 SNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHV 554
Query: 165 YMWGNAKDSQLGVPGLPVVQPCPVE 189
Y G+ QLG P + P VE
Sbjct: 555 YTMGSPVYGQLGNPQADGMLPVRVE 579
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 12/176 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+++TWG D +GRLG G + +P+ V AL P ++CG T+ LT G
Sbjct: 501 KIFTWG-DGDKGRLGHG------DKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGH 553
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+ +LG G ++ L + +I+ G YH LT +V++WG G
Sbjct: 554 VYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGA 613
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+G+LGH T ++ P ++EAL D+ V + CG + +AA+ ++ W + D +
Sbjct: 614 NGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAIC----IHKWVSGVDQSM 665
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A+ + V +SCGG ++T++G++++WG S LG G +PKL+ L ++ I
Sbjct: 307 AVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIEL 366
Query: 96 IANGGYHSLALTDDGKVFSWGYG--GHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGG 152
+A G YH+ A+T G +++WG G G LGH + VP + L V+ I+CG
Sbjct: 367 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGP 426
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A VT G+L+ +G D GV G
Sbjct: 427 WHTAIVTSAGQLFTFG---DGSFGVLG 450
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 22/190 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + LS+P +V++L + +CG + T + E
Sbjct: 437 QLFTFG-DGSFGVLGHG------DRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 489
Query: 57 ---------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+++ WG LG GD+ P + LV+ QIA G ++ALT
Sbjct: 490 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALT 549
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYM 166
G V++ G +GQLG+ + +P+ +E L FV I+CG A +T + ++Y
Sbjct: 550 TSGHVYTMGSPVYGQLGNP-QADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYT 608
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 609 WGKGANGRLG 618
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L V + + I+ GG H+ +T G+++SWG G+LGH + P +I+ALA
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ + +ACG + AVT G LY WGN
Sbjct: 361 NMNIELVACGEYHTCAVTLSGDLYTWGN 388
>gi|5824124|emb|CAB54041.1| RPGR protein [Mus musculus]
Length = 1001
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG D EG++GL + + IP +V + P++ +SCG + + +T +G+L
Sbjct: 160 KLFMWG-DNSEGQIGL------EDKSNVCIPHEV-TVGKPISWISCGYYHSAFVTMDGEL 211
Query: 61 WNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G N +LG + + P+ + + + R+IQ+A GG H++ LT+ V+++G G
Sbjct: 212 YTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK-VVYAFGLG 269
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P +IE + D+ + HI+CG + +A +TE G LY +G+ + +LG+
Sbjct: 270 QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGL 329
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG + P+ +KAL P V +CG T+V T+ G
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGG 107
Query: 60 LWNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ G N+ +LG GD + + D I Q++ G S ALT+DGK+F WG
Sbjct: 108 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT-IKQLSAGANTSAALTEDGKLFMWGD 166
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G N +P E + ++ I+CG SA VT G+LY +G ++ +LG+
Sbjct: 167 NSEGQIGLEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 224
Query: 178 P 178
P
Sbjct: 225 P 225
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 29 SIPSKV---KALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+IPSK +P+ +SCG T ++T +L+ +G+N+ +LG G + KP +
Sbjct: 25 NIPSKFWFKNDIPI---CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCI 81
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADE 143
L ++ A G H+L TD G V++ G GQLG T ++ +V AD
Sbjct: 82 KALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT 141
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++ G +TSAA+TE GKL+MWG+ + Q+G+
Sbjct: 142 -IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL 174
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3991 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4041
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4042 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4101
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4102 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4161
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4050 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4106
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4107 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4166
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4167 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4214
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 4202 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4255
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L + I +A G H+LAL +G V++WG GQ
Sbjct: 4256 FGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4315
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4316 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4352
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4147 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4199
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4200 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4259
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4260 RLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4318
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 671
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 97/176 (55%), Gaps = 9/176 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+++WG + G+LGLG +E S P KV+A+ V A++ + T LT +G +W
Sbjct: 198 VWSWGWNY-NGQLGLGS---IHEDTYESTPKKVEAIS-NVTAIAAQTYHTQALTRDGNVW 252
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG+N +LG GD+ P+ + L +V + I GG HSLA+T DG+V++WG G
Sbjct: 253 SWGSNDFGQLGMGDQNDRDAPQKVEALSNV--VAINAGGNHSLAVTRDGQVWAWGENSEG 310
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG ++ P +EAL++ V I GG + A+T G ++ WG Q+G
Sbjct: 311 QLGLGDLWDRDAPQKVEALSN--VVAINAGGDHTLALTRDGSVWAWGKNGRGQIGT 364
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 85/155 (54%), Gaps = 8/155 (5%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG---DRVGGWKPKLL 85
+ P KV+AL VA ++ G T+ LT +G +W+WG N N +LG G + PK +
Sbjct: 168 NTPQKVEALSNAVA-LAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKV 226
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFV 145
+ +V IA YH+ ALT DG V+SWG GQLG ++ P +EAL++ V
Sbjct: 227 EAISNV--TAIAAQTYHTQALTRDGNVWSWGSNDFGQLGMGDQNDRDAPQKVEALSN--V 282
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
I GG+ S AVT G+++ WG + QLG+ L
Sbjct: 283 VAINAGGNHSLAVTRDGQVWAWGENSEGQLGLGDL 317
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 9/141 (6%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V ++ G F++ L +G +W+WG N+ LG GDRV P+ + L + + +A G
Sbjct: 129 VPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKVEALSNA--VALAAGD 186
Query: 101 YHSLALTDDGKVFSWGYGGHGQLG----HSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
H+LALT DG V+SWG+ +GQLG H T + P +EA+++ VT IA +
Sbjct: 187 DHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTY-ESTPKKVEAISN--VTAIAAQTYHTQ 243
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
A+T G ++ WG+ QLG+
Sbjct: 244 ALTRDGNVWSWGSNDFGQLGM 264
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 47/213 (22%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+TWG ++ +GRLG+G G ++P ++ L V +++ G ++ ++ +G +W
Sbjct: 9 LWTWGGND-DGRLGIGA------TGDQNLPVQLSYLS-NVVSLAGGEKHSLAVSGDGSVW 60
Query: 62 NWGANSNYELG----------------------------RGDRVGG------WKP-KLLP 86
+WG+NS +LG GD G + P K P
Sbjct: 61 SWGSNSAGQLGVESLTPASVLAPVHALYSGDDFHLFYDTDGDGTGDICDDCPYDPFKTAP 120
Query: 87 NLVDV--RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF 144
L + +A G SL L DG V+SWG + LG ++ P +EAL++
Sbjct: 121 GLSGCGNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKVEALSNAV 180
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A G + A+T G ++ WG + QLG+
Sbjct: 181 A--LAAGDDHTLALTRDGSVWSWGWNYNGQLGL 211
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK 111
M +T+ G LW WG N + LG G P L L +V + +A G HSLA++ DG
Sbjct: 1 MAVTQGGALWTWGGNDDGRLGIGATGDQNLPVQLSYLSNV--VSLAGGEKHSLAVSGDGS 58
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEAL--ADEF 144
V+SWG GQLG V + AL D+F
Sbjct: 59 VWSWGSNSAGQLGVESLTPASVLAPVHALYSGDDF 93
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+++ WG + EG+LGLG + P KV+AL V A++ GG T+ LT +G +
Sbjct: 300 QVWAWGENS-EGQLGLG------DLWDRDAPQKVEALS-NVVAINAGGDHTLALTRDGSV 351
Query: 61 WNWGANSNYELGRGD 75
W WG N ++G G+
Sbjct: 352 WAWGKNGRGQIGTGE 366
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
+A+T G +++WG G+LG T +Q +P+ + L++ V +A G S AV+ G
Sbjct: 1 MAVTQGGALWTWGGNDDGRLGIGATGDQNLPVQLSYLSN--VVSLAGGEKHSLAVSGDGS 58
Query: 164 LYMWGNAKDSQLGVPGL 180
++ WG+ QLGV L
Sbjct: 59 VWSWGSNSAGQLGVESL 75
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3983 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4033
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4034 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4093
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4094 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4153
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4042 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4098
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4099 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4158
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4159 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4206
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 4194 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4247
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L + I +A G H+LAL +G V++WG GQ
Sbjct: 4248 FGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4307
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4308 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4344
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4139 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4191
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4192 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4251
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4252 RLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4310
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3990 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4040
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4041 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4100
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4101 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4160
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4049 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4105
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4106 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4165
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4166 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4213
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 4201 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4254
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L + I +A G H+LAL +G V++WG GQ
Sbjct: 4255 FGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4314
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4315 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4351
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4146 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4198
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4199 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4258
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4259 RLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4317
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 98/180 (54%), Gaps = 13/180 (7%)
Query: 11 EGRLGLGPGRGP----NEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGA 65
+G+LG G R P ++ + P ++ L + AVSCG TM LT G +++WG
Sbjct: 20 DGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTASGAVYSWGW 79
Query: 66 NSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL 123
S +LG GD P+ + +++ ++ GG HS A+T+DG ++ WG GQL
Sbjct: 80 GSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYMWGETHWGQL 139
Query: 124 G--HSF-TQNQKVPM---VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G F ++ P+ ++E +ADE V ++CGG+ +AA+T G++Y+WG QLG+
Sbjct: 140 GLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVWGRGDSGQLGI 199
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 6/185 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPG--RGPNEAG--GLSIPSKVKALP-VPVAAVSCGGFFTMVLT 55
+Y WGR + G+LG+G + ++ G G+S P V+ V V+CG F + +T
Sbjct: 185 RVYVWGRGD-SGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVT 243
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
E+G ++ WG LG G PK + D+ ++++ GG+H++ + G +++
Sbjct: 244 EQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAF 303
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G +G+LG T+++ P +++AL + V ACGGS + VT G Y+ G +L
Sbjct: 304 GRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYVAGRPDHGRL 363
Query: 176 GVPGL 180
G+ +
Sbjct: 364 GMTDM 368
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
++GQL GA L D PK L L+ I+ ++ G H++ALT G V+SW
Sbjct: 19 DDGQLGT-GAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTASGAVYSW 77
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADE--FVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
G+G GQLGH ++ VP I E V +++CGG SAAVT G LYMWG
Sbjct: 78 GWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYMWGETHWG 137
Query: 174 QLGVP 178
QLG+P
Sbjct: 138 QLGLP 142
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP----VPVAAVSCGGFFTMVLTEE 57
LY WG G+LGL EA S P K L V VSCGG T LT
Sbjct: 128 LYMWGETH-WGQLGLPK---EFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNL 183
Query: 58 GQLWNWGANSNYELGRGDR----------VGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+++ WG + +LG G +G +P L+ +++Q+A G +HS A+T
Sbjct: 184 GRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVT 243
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
+ G V+ WG +G LG T +Q+ P +E D ++CGG + V + G Y +
Sbjct: 244 EQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAF 303
Query: 168 GNAKDSQLGV 177
G + +LG+
Sbjct: 304 GRGEYGRLGL 313
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 9/164 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+Y WG+ E G LG+G + P +V+ +P VSCGG+ TMV+ + G
Sbjct: 247 HVYIWGK-EDYGMLGVG------QTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAKSGD 299
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G LG GD +P L+ L +IQ A GG H+L +T DG + G
Sbjct: 300 CYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYVAGRPD 359
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
HG+LG + + VP ++ L V ++ GG+ S A+T +
Sbjct: 360 HGRLGMTDMKPLSVPTRLD-LGPIPVRQVSAGGAHSMALTHSSR 402
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+++WG+++ G+LGLG + + P +++L +P +S GG + LT G
Sbjct: 157 EIFSWGQNK-YGQLGLG-----QQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG GD P LL L +++ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
+GQLGH+ T ++ P + L V+ IACG T A + GK+ +G + QLG
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTR 330
Query: 179 G-LPVVQPCPVE 189
+ P PV+
Sbjct: 331 STCNRISPTPVK 342
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+ WG + G+LGLG G +E L P + + V V CG T+ L E+G +
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEVLLE-PRRCEFFEGKRVRDVGCGRRHTVFLLEDGTV 55
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ G N +LG KP+ + +L I+ ++ G H+LAL D G+VF+WG G
Sbjct: 56 YTCGCNDLGQLGHEK--ARKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG S ++ +VP +++L++ +T +ACG S A+ G+++ WG K QLG+
Sbjct: 114 GQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGL 171
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 84/151 (55%), Gaps = 5/151 (3%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNL 88
P +V +L + AVSCG T+ L ++GQ++ WG S+ +LG + P+ + +L
Sbjct: 75 PEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADEFVT 146
+V I Q+A G +HSLAL G++FSWG +GQLG Q V P VI++L
Sbjct: 135 SEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLG-QQGACVCSPQVIQSLQGIPFG 193
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
I+ GG+ S +T G ++ WG K QLG+
Sbjct: 194 QISAGGAHSFGLTLSGAIFGWGRNKFGQLGL 224
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ R+ + G H++ L +DG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLGH + +K P + +L + + ++CG + + A+ +KG+++ WG D QL GL
Sbjct: 64 GQLGHE--KARKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQL---GL 118
Query: 181 PVVQPC 186
+V+ C
Sbjct: 119 SIVEDC 124
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Pan troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3998 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4048
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4168
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4057 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGL 4221
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 4209 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL +G V++WG GQ
Sbjct: 4263 FGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4322
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4323 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4154 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGS 4206
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4266
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4267 RLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|449081281|sp|Q9R0X5.2|RPGR_MOUSE RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Short=mRpgr; Flags: Precursor
Length = 1001
Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG D EG++GL + + IP +V + P++ +SCG + + +T +G+L
Sbjct: 160 KLFMWG-DNSEGQIGL------EDKSNVCIPHEV-TVGKPISWISCGYYHSAFVTMDGEL 211
Query: 61 WNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G N +LG + + P+ + + + R+IQ+A GG H++ LT+ V+++G G
Sbjct: 212 YTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK-VVYAFGLG 269
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P +IE + D+ + HI+CG + +A +TE G LY +G+ + +LG+
Sbjct: 270 QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGL 329
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG + P+ +KAL P V +CG T+V T+ G
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGG 107
Query: 60 LWNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ G N+ +LG GD + + D I Q++ G S ALT+DGK+F WG
Sbjct: 108 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT-IKQLSAGANTSAALTEDGKLFMWGD 166
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G N +P E + ++ I+CG SA VT G+LY +G ++ +LG+
Sbjct: 167 NSEGQIGLEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 224
Query: 178 P 178
P
Sbjct: 225 P 225
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 29 SIPSKV---KALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+IPSK +P+ +SCG T ++T +L+ +G+N+ +LG G + KP +
Sbjct: 25 NIPSKFWFKNDIPI---CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCI 81
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADE 143
L ++ A G H+L TD G V++ G GQLG T ++ +V AD
Sbjct: 82 KALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT 141
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++ G +TSAA+TE GKL+MWG+ + Q+G+
Sbjct: 142 -IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL 174
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3998 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4048
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4168
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4057 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4221
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 4209 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L + I +A G H+LAL +G V++WG GQ
Sbjct: 4263 FGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4322
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + + I+ G SAA T
Sbjct: 4323 LGLGHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWT 4359
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4154 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4206
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4266
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4267 RLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Nomascus leucogenys]
Length = 4855
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 4203 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4256
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL +G V++WG GQ
Sbjct: 4257 FGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4316
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4317 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4353
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4056 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4113 LGHGNSDRQRRPX-----QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4167
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4168 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4215
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4148 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4200
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4201 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4261 RLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4319
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3997 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4047
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4108 GDYGKLGHGNSDRQRRPX-----QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4162
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3998 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4048
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4168
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4057 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4221
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 4209 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L + I +A G H+LAL +G V++WG GQ
Sbjct: 4263 FGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4322
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4323 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4154 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4206
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4266
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4267 RLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3991 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4041
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4042 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4101
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4102 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4161
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4050 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4106
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4107 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4166
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4167 KKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGL 4214
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 4202 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4255
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL +G V++WG GQ
Sbjct: 4256 FGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4315
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4316 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4352
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4147 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGS 4199
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4200 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4259
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4260 RLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4318
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG +P K++A + V ++ G T +TE+G
Sbjct: 146 EVQSWGRNQ-NGQLGLGTTEDS------LLPQKIQAFEGICVKMIAAGAEHTAAVTEDGD 198
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR + P+ + + +++ IA G H++ ++ G ++++G+
Sbjct: 199 LYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSK 258
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH ++ P +EAL D + I+ G + A+T GKLY WG K Q+G G
Sbjct: 259 YGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGA-G 317
Query: 180 LPVVQPCPVE 189
V PV+
Sbjct: 318 DSVDHCSPVQ 327
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEE-GQ 59
L +WGR E +G+LG G +A +P+ + P + +V CG T +EE Q
Sbjct: 42 LCSWGRGE-DGQLGHG------DAEDRLVPTVISGFDAPRITSVICGADHTTAYSEEEQQ 94
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG LG G+ + P+ + L ++I Q+A G H LA+T G+V SWG
Sbjct: 95 VYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQ 154
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG T++ +P I+A V IA G +AAVTE G LY WG + LG+
Sbjct: 155 NGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 212
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GRLG G + + P V+AL + + ++CG + +T G+
Sbjct: 94 QVYSWGWGD-FGRLGHG------NSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGGE 146
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG G P+ + + + IA G H+ A+T+DG ++ WG+G
Sbjct: 147 VQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGR 206
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + + E + IACG + V+ G LY +G +K QLG
Sbjct: 207 YGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLG 263
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + +P KV + + ++CG T+ ++ G
Sbjct: 198 DLYGWGWGR-YGNLGLG------DRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGI 250
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P + L D QI+ G H++ALT DGK++ WG+
Sbjct: 251 LYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNK 310
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G + + P+ + A++ V +ACG + A TEK ++ WG QLG
Sbjct: 311 FGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLG 367
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 30 IPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
P KV+AL + GG+ TM LT +G+L+ WG N ++G GD V P +
Sbjct: 272 FPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFP 331
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ Q+A G H+LA T+ VF+WG G GQLGH ++ P++I+A++ +
Sbjct: 332 AEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMIDAISPDGSGSK 391
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQP 185
ST+ T K +W + + VP V +P
Sbjct: 392 KLESSTAVPFTAK----VWVSPSERYALVPDEKVAKP 424
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V VS G ++ L E L +WG + +LG GD P ++ RI + G
Sbjct: 23 VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGA 82
Query: 101 YHSLALT-DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
H+ A + ++ +V+SWG+G G+LGH + + P + AL + +ACG S AVT
Sbjct: 83 DHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVT 142
Query: 160 EKGKLYMWGNAKDSQLGV 177
G++ WG ++ QLG+
Sbjct: 143 MGGEVQSWGRNQNGQLGL 160
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan
paniscus]
Length = 4798
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3935 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 3985
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 3986 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4045
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4046 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4105
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 3994 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4050
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4051 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4110
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4111 KKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGL 4158
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 4146 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4199
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL +G V++WG GQ
Sbjct: 4200 FGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4259
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4260 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4296
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4091 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGS 4143
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4144 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4203
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4204 RLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4262
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3998 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4048
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4168
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4057 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4221
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 4209 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L + I +A G H+LAL +G V++WG GQ
Sbjct: 4263 FGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4322
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + + I+ G SAA T
Sbjct: 4323 LGLGHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWT 4359
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4154 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4206
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4266
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4267 RLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 371
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 9/177 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG + GRLG G + L IP ++AL + + +SCG + +T E +
Sbjct: 177 DVYSWGWGD-FGRLGHG------DPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENK 229
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N ELG G P+ + +RI +A G HS+A+T+DG ++ WG+G
Sbjct: 230 VLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGR 289
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG T ++ +P + D+ V ++CG + +++ G LY G +K QLG
Sbjct: 290 YGNLGLGDTNDRLIPEKVNIDGDKIVM-VSCGWRHTISISSSGGLYTHGWSKYGQLG 345
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ-LW 61
+WGR E +G+LG G + +P+K+ A + +V+CG +T+ ++ G+ ++
Sbjct: 127 SWGRGE-DGQLGHG------DTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVY 179
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG GD + P + L +RI QI+ G H LA+T + KV SWG +G
Sbjct: 180 SWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNG 239
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+LG T++ VP I A + +A G S A+TE G LY WG + LG+
Sbjct: 240 ELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGL 295
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 85/152 (55%), Gaps = 15/152 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ +WGR++ G LGLG + + +P K+ A + + V+ G ++ +TE+G
Sbjct: 229 KVLSWGRNQ-NGELGLGTTKDSH------VPQKILAFEGIRIKMVAAGAEHSVAITEDGD 281
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV---RIIQIANGGYHSLALTDDGKVFSWG 116
L+ WG LG GD +L+P V++ +I+ ++ G H+++++ G +++ G
Sbjct: 282 LYGWGWGRYGNLGLGDT----NDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHG 337
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ +GQLGH ++ VP ++AL+D+ ++ +
Sbjct: 338 WSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 369
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK-LYMWG 168
V SWG G GQLGH T ++ +P + A + + + CG + A ++ GK +Y WG
Sbjct: 125 VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWG 182
>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 407
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 89/175 (50%), Gaps = 12/175 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++TWG + G+LG G + N+ P +V L + A++ G + L +G +W
Sbjct: 129 VWTWGSNWA-GQLGDGTTKSRNK------PVQVNNLK-NITAIASKGLHNLALKSDGTVW 180
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N +LG G P +L II IA GGYHSLA DG +++WG +G
Sbjct: 181 TWGRNIYGQLGDGTTTDRNTPVQTRSLN--TIISIAGGGYHSLAQKADGTIWTWGLNQYG 238
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG N+ +P+++ + D V+ I CGG S + G +++WG + QLG
Sbjct: 239 QLGDGTITNRTIPVLVNGIKD--VSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLG 291
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++TWGR+ G+LG G N P + ++L + +++ GG+ ++ +G +W
Sbjct: 179 VWTWGRNI-YGQLGDGTTTDRNT------PVQTRSLNT-IISIAGGGYHSLAQKADGTIW 230
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N +LG G P L+ + DV +I+ GG HS+ L ++G ++ WG+ HG
Sbjct: 231 TWGLNQYGQLGDGTITNRTIPVLVNGIKDVSMIRC--GGDHSIVLKNNGTIWIWGFNQHG 288
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLP 181
QLG T N+ P+ + L + + I GG S + G ++ WGN ++ QLG G
Sbjct: 289 QLGDRSTDNRSTPVPMGDLKN--IMTIDGGGDHSLILKSDGTVWTWGNNENGQLG-DGTT 345
Query: 182 VVQPCPVE 189
+ + P++
Sbjct: 346 MSRATPIQ 353
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 14/176 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++TWG ++ G+LG G +IP V + V+ + CGG ++VL G +W
Sbjct: 229 IWTWGLNQ-YGQLGDG------TITNRTIPVLVNGIK-DVSMIRCGGDHSIVLKNNGTIW 280
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVR-IIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N + +LG DR + +P + D++ I+ I GG HSL L DG V++WG +
Sbjct: 281 IWGFNQHGQLG--DRSTDNRSTPVP-MGDLKNIMTIDGGGDHSLILKSDGTVWTWGNNEN 337
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG T ++ P+ L++ VT IA G S A+ G ++ WG+ ++ QLG
Sbjct: 338 GQLGDGTTMSRATPIQASTLSN--VTAIASGEQHSIALKSDGTIWAWGSNRNGQLG 391
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 5/160 (3%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
I +++ + VS G F ++ L +G + WG N + +LG G P + +L
Sbjct: 49 ITTRIPIFASTILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLN 108
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
+V IA G +HS+ALT DG V++WG GQLG T+++ P+ + L + +T IA
Sbjct: 109 NV--TAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNLKN--ITAIA 164
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
G + A+ G ++ WG QLG G + PV+
Sbjct: 165 SKGLHNLALKSDGTVWTWGRNIYGQLG-DGTTTDRNTPVQ 203
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 35 KALPVP------VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ PVP + + GG +++L +G +W WG N N +LG G + P L
Sbjct: 298 RSTPVPMGDLKNIMTIDGGGDHSLILKSDGTVWTWGNNENGQLGDGTTMSRATPIQASTL 357
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE 138
+V IA+G HS+AL DG +++WG +GQLG N+ P++++
Sbjct: 358 SNV--TAIASGEQHSIALKSDGTIWAWGSNRNGQLGDGSISNRSTPVLVK 405
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Pongo abelii]
Length = 4864
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 4001 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4051
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4052 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4111
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4112 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4171
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4060 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4116
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4117 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4176
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4177 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4224
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 4212 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4265
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL +G V++WG GQ
Sbjct: 4266 FGQDRLIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4325
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4326 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4362
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4157 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4209
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4210 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4269
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4270 RLIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4328
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|195567859|ref|XP_002107476.1| GD17489 [Drosophila simulans]
gi|194204883|gb|EDX18459.1| GD17489 [Drosophila simulans]
Length = 1505
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLW 61
Y+WG E + RLG G + ++P+K+ AL V +V CG ++ +T G L
Sbjct: 225 YSWGTGE-DHRLGHG------DTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLL 277
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGG 119
WG + LG G+ P L+ L D ++ +A +G HSLALT +G VF+WG G
Sbjct: 278 TWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGD 337
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+G+LG+ P+++E+L V + G S A++ +G+LY WG A
Sbjct: 338 YGKLGNGNCNGSLQPILVESLPR--VQRVFAGSQFSVALSSEGQLYTWGKA 386
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEG 58
L TWGR RLG G + S+P+ V AL V A+ G ++ LT EG
Sbjct: 276 LLTWGRGT-YARLGHG------NSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 328
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG +LG G+ G +P L+ +L R+ ++ G S+AL+ +G++++WG
Sbjct: 329 LVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKA 386
Query: 119 ---GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GH QL Q VP ++ +L + + +A + A++ G+++ WG DSQ
Sbjct: 387 TCLGH-QLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGR-NDSQQ 444
Query: 176 GVPGLPVVQP 185
P +P
Sbjct: 445 ICPASVSSEP 454
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG ++ LG GD P + L + + G +S A+T G + +WG G +
Sbjct: 225 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTY 284
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
+LGH + ++ +P ++ AL+D V +A G + S A+T +G ++ WG+ +LG
Sbjct: 285 ARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 342
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG D G+LG G N G L P V++LP V V G F++ L+ EGQL+
Sbjct: 330 VFAWG-DGDYGKLGNG-----NCNGSLQ-PILVESLP-RVQRVFAGSQFSVALSSEGQLY 381
Query: 62 NWGANS--NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
WG + ++L G P+L+ +L RI+ +A H LAL+ G+VF WG
Sbjct: 382 TWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRND 441
Query: 120 HGQLGHSFTQNQ---KVPMVIEALADEFVTHIACGGSTSAAVTE 160
Q+ + ++ + P+++ +L + IAC + S T+
Sbjct: 442 SQQICPASVSSEPLLRTPILV-SLPTFPASGIACTSAQSLVWTQ 484
>gi|374297496|ref|YP_005047687.1| copper amine oxidase family protein [Clostridium clariflavum DSM
19732]
gi|359826990|gb|AEV69763.1| copper amine oxidase family protein [Clostridium clariflavum DSM
19732]
Length = 841
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 85/153 (55%), Gaps = 4/153 (2%)
Query: 21 GPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW 80
G +G IP +V+ L + +S G +T+ L +G +W WG N + +G G ++
Sbjct: 214 GETLSGNKLIPERVEGLE-RIIDISAGNKYTLALKIDGTVWAWGKNEDGNIGDGTQIDRE 272
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
P + NL ++ I + GG H LA+ DGKV++WG +GQLG + + P++I+ L
Sbjct: 273 TPVKVKNLTKIKRIAASFGG-HCLAVNTDGKVWAWGNNDYGQLGTGTKKAELTPVMIDKL 331
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
+ +A G + SAA+ ++G ++ WGN ++S
Sbjct: 332 TQ--IEDVAVGYNFSAALDKEGNVWTWGNNENS 362
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 31/182 (17%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+++ WG ++ G+LG G + P + L + V+ G F+ L +EG +
Sbjct: 302 KVWAWGNND-YGQLGTGTKKAE------LTPVMIDKL-TQIEDVAVGYNFSAALDKEGNV 353
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG N N PK L +L + II IA G H LAL +DG V+ WG
Sbjct: 354 WTWGNNENS-----------YPKKLKDLNN--IIDIAAGQSHLLALKNDGTVWIWGNFEE 400
Query: 121 -----GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQ+ + + +P+ IE L + IA G SA + + G +++WG DS+L
Sbjct: 401 MPVYRGQVKKN--TDTSLPVKIEELKG--IIAIAAQGGYSALLKDDGSMFVWGYL-DSEL 455
Query: 176 GV 177
+
Sbjct: 456 DI 457
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 17/136 (12%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGY 101
VS G ++ + +G +W WG E G+ KL+P V+ RII I+ G
Sbjct: 194 VSGGYSHSVAIKRDGTVWEWG-----ETLSGN-------KLIPERVEGLERIIDISAGNK 241
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTE 160
++LAL DG V++WG G +G +++ P+ ++ L + IA G AV
Sbjct: 242 YTLALKIDGTVWAWGKNEDGNIGDGTQIDRETPVKVKNLTK--IKRIAASFGGHCLAVNT 299
Query: 161 KGKLYMWGNAKDSQLG 176
GK++ WGN QLG
Sbjct: 300 DGKVWAWGNNDYGQLG 315
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 28/177 (15%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++TWG +E S P K+K L + ++ G + L +G +W
Sbjct: 353 VWTWGNNEN------------------SYPKKLKDLN-NIIDIAAGQSHLLALKNDGTVW 393
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVR-IIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG + RG L + +++ II IA G +S L DDG +F WGY
Sbjct: 394 IWGNFEEMPVYRGQVKKNTDTSLPVKIEELKGIIAIAAQGGYSALLKDDGSMFVWGY--- 450
Query: 121 GQLGHSF-TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
L + VP +IE L V IA GG A + G L+ +G + Q+G
Sbjct: 451 --LDSELDIDDHLVPTIIEELNG--VREIAAGGGHLLAFKDDGSLWAFGRNTNGQIG 503
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S+P K++ L +A + GG+ + +L ++G ++ WG + EL D + P ++ L
Sbjct: 415 SLPVKIEELKGIIAIAAQGGY-SALLKDDGSMFVWGY-LDSELDIDDHL---VPTIIEEL 469
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFV 145
VR +IA GG H LA DDG ++++G +GQ+G T ++K P V D V
Sbjct: 470 NGVR--EIAAGGGHLLAFKDDGSLWAFGRNTNGQIGDGTTISRKKPTVTAFNKDPLV 524
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 16/112 (14%)
Query: 83 KLLPNLV-----DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
KL+ +LV D + ++ G HS+A+ DG V+ W G + + N+ +P +
Sbjct: 176 KLIDDLVYMFGQDYATVHVSGGYSHSVAIKRDGTVWEW--------GETLSGNKLIPERV 227
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
E L E + I+ G + A+ G ++ WG +D +G G + + PV+
Sbjct: 228 EGL--ERIIDISAGNKYTLALKIDGTVWAWGKNEDGNIG-DGTQIDRETPVK 276
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Equus caballus]
Length = 4860
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P ++E LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3997 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4047
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4167
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4056 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4172
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4173 KKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGL 4220
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4208 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL +G V++WG GQ
Sbjct: 4262 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4321
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + + I+ G SAA T
Sbjct: 4322 LGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4358
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4153 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGS 4205
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4206 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4265
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4266 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4324
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P V+ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLVEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D I+ +A G
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIVHVACGE 172
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 173 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 232
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 233 ADGQFFTWGKNSHGQLGL 250
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 183 QLFSWGAG-SDGQLGL-----MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 236
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 237 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 296
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 297 NAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 354
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 236 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 289
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 290 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 349
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 350 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 409
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 410 HTCNVKCPSPVK 421
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 133 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQH--------IVHVACGESHSLALSDRGQ 183
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 184 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 241
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 242 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 300
Query: 175 LGV 177
LG+
Sbjct: 301 LGL 303
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 103 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 160
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 161 ADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 197
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 68/152 (44%), Gaps = 21/152 (13%)
Query: 19 GRGPNEAGGLSI--------PSKVKALPV-PVAAVSCGGFFTMVLTEEGQLWNWGANSNY 69
G G N AG L + P VK L V +SCG T VLT+ G ++ +GA S
Sbjct: 292 GWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 351
Query: 70 ELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGGHGQLGHSFT 128
+LG P+ + L+ + QIA G H+LA G ++++G G GQLG T
Sbjct: 352 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 411
Query: 129 QNQKVPMVIE-----------ALADEFVTHIA 149
N K P ++ A AD F HI
Sbjct: 412 CNVKCPSPVKGYWAAHSGQLSARADRFKYHIV 443
>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2440
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3997 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4047
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4167
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4056 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4172
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4173 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4220
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4208 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL +G V++WG GQ
Sbjct: 4262 FGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4321
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4322 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4358
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4153 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4205
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4206 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4265
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P + LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4266 RLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4324
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
Length = 985
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 102/195 (52%), Gaps = 17/195 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+ WG + G+LGL E + P +++L +PVA +S GG + VL+ G
Sbjct: 138 QLFVWG-ENAHGQLGLR-----KEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGV 191
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG+NS +LG GD + P ++ +L + + I+ GG H+ L+ G VF++G GG
Sbjct: 192 VFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGG 251
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEKGKLYMWGNAKDSQLG-- 176
GQLGH+ +++ P ++ L V+ + CG T V ++Y +G QLG
Sbjct: 252 FGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNG 311
Query: 177 ------VPGLPVVQP 185
VP LPV+ P
Sbjct: 312 EQVKQSVP-LPVLLP 325
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 81/137 (59%), Gaps = 1/137 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNLVDVRIIQIANG 99
V ++CG ++ L+ +GQL+ WG N++ +LG R ++ P+ L +L + + QI+ G
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAG 179
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
G HS L+ G VF WG GQLG T ++ VP ++++L+ + I+CGG +A ++
Sbjct: 180 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLS 239
Query: 160 EKGKLYMWGNAKDSQLG 176
+ G ++ +G+ QLG
Sbjct: 240 KGGTVFTFGSGGFGQLG 256
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADE 143
L L + ++IQIA G HS+AL++DG++F WG HGQLG Q + P +++L
Sbjct: 112 LKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGI 171
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V I+ GG+ S ++ G ++ WG+ QLG+
Sbjct: 172 PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGL 205
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3639 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 3689
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 3690 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3749
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 3750 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 3809
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 3698 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3754
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 3755 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 3814
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 3815 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 3862
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 3850 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 3903
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL +G V++WG GQ
Sbjct: 3904 FGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 3963
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
LG T + + P V+ L + V I+ G SAA
Sbjct: 3964 LGLGHTNHVREPTVVTGLQGKNVRQISAGRCHSAA 3998
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 3795 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 3847
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 3848 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 3907
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 3908 RLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 3966
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG NS + G+G+ G KPK + L + I QI+ G HSLA W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA---------WTAL 736
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
+ HSF + + ++ L++ +A G +TS + G L
Sbjct: 737 PRDREHHSF-----LKLCLKLLSNHLALALAGGVATSILGRQAGPL 777
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 94/178 (52%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A+ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCG 698
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P V+EAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3998 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4048
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4168
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4057 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4221
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4209 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4263 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4322
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + + I+ G SAA T
Sbjct: 4323 LGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4359
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANG 99
+ G + T V++ +G + G S LG GD K L P+ ++
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAV 158
H+LA T +G+VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAV
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 159 TEKGKLYMWGNAKDSQLG 176
TE G+LY WG +LG
Sbjct: 527 TEDGELYTWGEGDFGRLG 544
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4154 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4206
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4266
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4267 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4325
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSXCLALRHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3998 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4048
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4168
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4057 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4221
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 4209 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL +G V++WG GQ
Sbjct: 4263 FGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4322
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4323 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4154 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4206
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4266
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4267 RLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
Length = 596
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 19/192 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG EG+LG+G + + +P+K+KAL + + VSCG + ++ L+E+G
Sbjct: 51 KVFPWGAG-SEGQLGIGEFKEIS-----FMPTKIKALAGIKIIQVSCGHYHSLALSEDGH 104
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 105 VFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSN 164
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G+ + P I AL + V +I+CG +A +TE+G+++ +G QL
Sbjct: 165 RSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 224
Query: 176 GVPGLPVVQPCP 187
QP P
Sbjct: 225 --------QPSP 228
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 91/155 (58%), Gaps = 3/155 (1%)
Query: 31 PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNL 88
P ++AL + V VSCG ++ + +G+++ WGA S +LG G+ + + P + L
Sbjct: 22 PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSEGQLGIGEFKEISFMPTKIKAL 81
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
++IIQ++ G YHSLAL++DG VFSWG GQLG +++Q +P +++L +
Sbjct: 82 AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQ 141
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPV 182
+A GG+ S A++ G + WG+ + QL + G V
Sbjct: 142 VAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKV 176
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 12/173 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WGR+ EG+LGLG + +IP KVK+L +P+A V+ GG + L+ G
Sbjct: 105 VFSWGRN-SEGQLGLGKN-----SRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTS 158
Query: 61 WNWGANSNYELG-RGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+ WG+N + +L G++V +KP + L ++ +I I+ G H+ LT++G+VF++G
Sbjct: 159 FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG 218
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGN 169
GQL S Q+ P +IE + V+ I C T A V G++ G
Sbjct: 219 NSSGQLQPSPRSGQRGPQLIEGIGGR-VSQIECASYHTIAYVYTTGQVVSLGR 270
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++ G NS +LG+ +P+ + L D+ + ++ G HS+A+ GKVF WG G
Sbjct: 1 YSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSE 60
Query: 121 GQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG F + +P I+ALA + ++CG S A++E G ++ WG + QLG+
Sbjct: 61 GQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL 118
>gi|307186651|gb|EFN72134.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 815
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
++CG F M L ++G+L++WG N+ +LG + P L+ +L+ V I+++ G HS
Sbjct: 90 IACGSSFAMALNKDGKLYSWGLNNYGQLGINSTKENYDPCLITSLIHVTIVKVVCGLEHS 149
Query: 104 LALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
LAL +GK++SWG GQLGH T+ + P+++ A ++ IA S A+ + G
Sbjct: 150 LALNSEGKIYSWGSNSKGQLGHGKKTEREIKPVMLCAPIMGKISDIAAQDDKSVAINKIG 209
Query: 163 KLYMWGN 169
+Y+WG+
Sbjct: 210 HVYVWGH 216
Score = 89.4 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 18/182 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAG-GLSIPSKVKALPVPVAA-----VSCGGFFTMVL 54
++Y+WG +E RLG R E + +P+++ +L + ++C + + L
Sbjct: 1 KVYSWGSNE-NCRLG----RPELEVKTKIYMPAQINSLSTRLTGEHITDIACNNYICLAL 55
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
T+ G+++ WG N Y D V P V+ II IA G ++AL DGK++S
Sbjct: 56 TDSGKIYTWG-NIKYSSSYYDIVS------TPYQVNFDIIHIACGSSFAMALNKDGKLYS 108
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG +GQLG + T+ P +I +L + + CG S A+ +GK+Y WG+ Q
Sbjct: 109 WGLNNYGQLGINSTKENYDPCLITSLIHVTIVKVVCGLEHSLALNSEGKIYSWGSNSKGQ 168
Query: 175 LG 176
LG
Sbjct: 169 LG 170
Score = 86.7 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 20/177 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y+WG ++ RLG + +P+K+ +L + ++ + ++ LT+ G+
Sbjct: 396 KVYSWGYND-NCRLG-----KLDSLATTYLPAKMDSLRGKRIIDIASNNYNSLALTDSGK 449
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG+ + + K LP+ V QIA G +ALT+DGK++SWG
Sbjct: 450 IYVWGSVN------------FTKKSLPDQCQVNPCQIACGMSFVMALTNDGKLYSWGTNT 497
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG S ++N P +I +L + + I CG S A+T KG +Y WG+ + QLG
Sbjct: 498 YGQLGIS-SENDLYPCLITSLENVHIDKIVCGSEHSLALTSKGHIYSWGSNHEGQLG 553
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S+P + + P +A CG F M LT +G+L++WG N+ +LG P L+ +L
Sbjct: 462 SLPDQCQVNPCQIA---CGMSFVMALTNDGKLYSWGTNTYGQLGISSE-NDLYPCLITSL 517
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN-QKVPMVIEALAD----E 143
+V I +I G HSLALT G ++SWG GQLG+ + +K P ++ A+
Sbjct: 518 ENVHIDKIVCGSEHSLALTSKGHIYSWGSNHEGQLGYDRECSVKKEPTKLKWTANGKTMG 577
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNA 170
++ IA SAAV + G +Y+WG++
Sbjct: 578 IISDIAAQHKVSAAVNKLGSVYVWGHS 604
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 19/132 (14%)
Query: 59 QLWNWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++++WG N N LG+ D + + P + +L RII IA+ Y+SLALTD GK++ WG
Sbjct: 396 KVYSWGYNDNCRLGKLDSLATTYLPAKMDSLRGKRIIDIASNNYNSLALTDSGKIYVWG- 454
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTH---IACGGSTSAAVTEKGKLYMWGNAKDSQ 174
+FT+ ++L D+ + IACG S A+T GKLY WG Q
Sbjct: 455 ------SVNFTK--------KSLPDQCQVNPCQIACGMSFVMALTNDGKLYSWGTNTYGQ 500
Query: 175 LGVPGLPVVQPC 186
LG+ + PC
Sbjct: 501 LGISSENDLYPC 512
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 59 QLWNWGANSNYELGRGD---RVGGWKP----KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
++++WG+N N LGR + + + P L L I IA Y LALTD GK
Sbjct: 1 KVYSWGSNENCRLGRPELEVKTKIYMPAQINSLSTRLTGEHITDIACNNYICLALTDSGK 60
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
+++WG + +S + V + D + HIACG S + A+ + GKLY WG
Sbjct: 61 IYTWG-----NIKYSSSYYDIVSTPYQVNFD--IIHIACGSSFAMALNKDGKLYSWGLNN 113
Query: 172 DSQLGV 177
QLG+
Sbjct: 114 YGQLGI 119
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY+WG + G+LG+ + + P + +L V + V CG ++ L EG+
Sbjct: 105 KLYSWGLNN-YGQLGINSTKENYD------PCLITSLIHVTIVKVVCGLEHSLALNSEGK 157
Query: 60 LWNWGANSNYELGRGDRVG-GWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+++WG+NS +LG G + KP +L + +I IA S+A+ G V+ WG+
Sbjct: 158 IYSWGSNSKGQLGHGKKTEREIKPVMLCAPIMGKISDIAAQDDKSVAINKIGHVYVWGH 216
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 111 KVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
KV+SWGY + +LG +P +++L + + IA S A+T+ GK+Y+WG+
Sbjct: 396 KVYSWGYNDNCRLGKLDSLATTYLPAKMDSLRGKRIIDIASNNYNSLALTDSGKIYVWGS 455
Query: 170 AKDSQLGVPGLPVVQPCPV 188
++ +P V PC +
Sbjct: 456 VNFTKKSLPDQCQVNPCQI 474
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3961 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4011
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4012 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4071
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4072 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4131
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4020 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4076
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4077 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4136
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4137 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4184
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 4172 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4225
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L + I +A G H+LAL +G V++WG GQ
Sbjct: 4226 FGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4285
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4286 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4322
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4117 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4169
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4170 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4229
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4230 RLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4288
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
Length = 1132
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 1 ELYTWGR-DEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTE 56
+LYTWG G LG G NE +P +V P + V+A+SCG + T ++T
Sbjct: 428 DLYTWGNGTSNSGLLGHG-----NEVSHW-VPKRVNG-PLEGIHVSAISCGPWHTAIVTS 480
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD-------- 108
GQL+ +G S LG GDR P+ + +L +R ++ A G +H+ A+ +
Sbjct: 481 AGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 540
Query: 109 ----DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
GK+F+WG G G+LGH + VP + AL + IACG + A+T G +
Sbjct: 541 SNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHV 600
Query: 165 YMWGNAKDSQLGVPGLPVVQPCPVE 189
Y G+ QLG P + P VE
Sbjct: 601 YTMGSPVYGQLGNPQADGMLPVRVE 625
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 22/181 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+++TWG D +GRLG G + +P+ V AL P ++CG T+ LT G
Sbjct: 547 KIFTWG-DGDKGRLGHG------DKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGH 599
Query: 60 LWNWGANSNYELGRGDRVGGWKP-----KLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
++ G+ +LG + G P KL N V+ +I+ G YH LT +V++
Sbjct: 600 VYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNFVE----EISCGAYHVAVLTSRTEVYT 654
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG G +G+LGH T ++ P ++EAL D+ V + CG + +AA+ ++ W + D
Sbjct: 655 WGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAIC----IHKWVSGVDQS 710
Query: 175 L 175
+
Sbjct: 711 M 711
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A+ + V +SCGG ++T++G++++WG S LG G +PKL+ L ++ I
Sbjct: 353 AVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIEL 412
Query: 96 IANGGYHSLALTDDGKVFSWGYG--GHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGG 152
+A G YH+ A+T G +++WG G G LGH + VP + L V+ I+CG
Sbjct: 413 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGP 472
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A VT G+L+ +G D GV G
Sbjct: 473 WHTAIVTSAGQLFTFG---DGSFGVLG 496
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 22/190 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + LS+P +V++L + +CG + T + E
Sbjct: 483 QLFTFG-DGSFGVLGHG------DRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 535
Query: 57 ---------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+++ WG LG GD+ P + LV+ QIA G ++ALT
Sbjct: 536 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALT 595
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYM 166
G V++ G +GQLG+ + +P+ +E L FV I+CG A +T + ++Y
Sbjct: 596 TSGHVYTMGSPVYGQLGNP-QADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYT 654
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 655 WGKGANGRLG 664
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L V + + I+ GG H+ +T G+++SWG G+LGH + P +I+ALA
Sbjct: 347 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 406
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ + +ACG + AVT G LY WGN
Sbjct: 407 NMNIELVACGEYHTCAVTLSGDLYTWGN 434
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P ++E LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4062 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4118
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4119 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSN 4178
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4179 KKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGL 4226
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N PS +A V CG T V+ G +
Sbjct: 4003 DVYLWG----AGRHGQLAEAGRNVMIPAGAPSFSQA-----QQVICGQNCTFVIQANGTV 4053
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4054 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4113
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GK++ +GN +LG+
Sbjct: 4114 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGL 4173
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4214 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4267
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LA+T G V++WG GQ
Sbjct: 4268 FGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQ 4327
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P +I L + + I+ G SAA T
Sbjct: 4328 LGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4364
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4159 KMFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGS 4211
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4212 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4271
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P + LA + +A G + A+T G +Y WG+ + QLG+
Sbjct: 4272 RLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGL 4330
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P V+ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLVEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L V I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3998 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4048
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4168
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4057 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4221
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 4209 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL +G V++WG GQ
Sbjct: 4263 FGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4322
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4323 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4154 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4206
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4266
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4267 RLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
Length = 531
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 99/175 (56%), Gaps = 7/175 (4%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LTPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
V L + V IACG ++S AV + G++Y WG + QLG+ G V Q PV
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGL-GNNVNQLTPVR 226
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ V P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPTHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +TE+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTEDDEVFVFGLNYSNCLGTGDNQSTLTPKKLEALCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +T+D +VF +G LG Q+ P +EAL + + ++ G G TE
Sbjct: 34 ALYVTEDDEVFVFGLNYSNCLGTGDNQSTLTPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ +Q C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVC 122
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG G KP+ + L D II +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVRE--GNKPEQIGALADQHIIHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 SDGQFFTWGKNSHGQLGL 171
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLG 275
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
+GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 YGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG + G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHVREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA----CGGSTSAAVTEKGKL 164
GQLG T N K P ++ A AD F HI GG + + K +
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Query: 165 Y 165
Y
Sbjct: 384 Y 384
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D I+ +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIVHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLN-TKGQLGHEREGNKPEQIGALADQH--------IVHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 78/181 (43%), Gaps = 24/181 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEEDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA----CGGSTSAAVTEKGKL 164
GQLG T N K P ++ A +D F HI GG + + K +
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARSDRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Query: 165 Y 165
Y
Sbjct: 384 Y 384
>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
jacchus]
Length = 1006
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 98/186 (52%), Gaps = 11/186 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G + N P K+ L + + VSCG + ++ L+++ Q
Sbjct: 95 RVFAWGAG-SEGQLGIGEFKEIN-----FTPKKITTLTGIKIIQVSCGHYHSLALSKDSQ 148
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS+ +LG G + P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 149 VFSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGWGSN 208
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G + P+ I AL + V +I+CG +A +++ GK++ +G+ QL
Sbjct: 209 SAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQL 268
Query: 176 GVPGLP 181
G P
Sbjct: 269 GYNPTP 274
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
Query: 30 IPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPKLLPN 87
+P V+AL + VSCG ++ + +G+++ WGA S +LG G+ + + PK +
Sbjct: 65 LPEPVQALKTLKFNLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITT 124
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVT 146
L ++IIQ++ G YHSLAL+ D +VFSWG HGQLG +Q P + +L V
Sbjct: 125 LTGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVA 184
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPV 182
+A GG+ S A++ G + WG+ QL + G V
Sbjct: 185 QVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV 220
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 99/174 (56%), Gaps = 12/174 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG E + P +V++L +PVA V+ GG + L+ G
Sbjct: 148 QVFSWGKN-SHGQLGLG-----KELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR +V KP + L ++ +I I+ G H+ L+ DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGN 169
GQLG++ T ++ P ++E + D V+ I CGG T A V G++ +G+
Sbjct: 262 DNSSGQLGYNPTPKKRGPQIVERI-DGLVSQIDCGGDHTIAYVHTTGQVVSFGH 314
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK 111
++L + + G NS +LGR G P+ + L ++ ++ G HSLA+ G+
Sbjct: 36 LLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNLVSCGKEHSLAVCHKGR 95
Query: 112 VFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WG G GQLG F + P I L + ++CG S A+++ +++ WG
Sbjct: 96 VFAWGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGHYHSLALSKDSQVFSWGKN 155
Query: 171 KDSQLGV 177
QLG+
Sbjct: 156 SHGQLGL 162
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
++Q A+G H+L L + V S G GQLG +P ++AL ++CG
Sbjct: 25 LLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNLVSCGK 84
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
S AV KG+++ WG + QLG+
Sbjct: 85 EHSLAVCHKGRVFAWGAGSEGQLGI 109
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3997 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4047
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4167
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4056 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4172
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGK-LYMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G ++ +G+ +LG+
Sbjct: 4173 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGL 4220
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4208 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL +G V++WG GQ
Sbjct: 4262 FGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4321
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4322 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4358
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4153 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4205
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4206 VVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4265
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4266 RLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4324
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|302799471|ref|XP_002981494.1| hypothetical protein SELMODRAFT_114812 [Selaginella moellendorffii]
gi|300150660|gb|EFJ17309.1| hypothetical protein SELMODRAFT_114812 [Selaginella moellendorffii]
Length = 420
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 6/164 (3%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR----VGGWKPKLLP 86
P+ V LP +A V+CG + ++ LT+ G+LW WG N+ +LGRG++ P+ +
Sbjct: 44 PAPVPDLPPSIARVACGHYHSLALTQSGELWAWGRNNEGQLGRGEKSILSAATITPQRVR 103
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFV 145
+ R+ A G S+A+ +DG ++SWG GQLG +P I ALA + V
Sbjct: 104 GMESTRVRAAAGSGVVSMAICEDGSLWSWGSSKRGQLGLGLGVTRSLLPQKIHALAGKSV 163
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
++ G + A T G+L+ WG +LG LP QP ++
Sbjct: 164 LQVSLGWGHALACTMDGELFSWGYHDSGRLGYL-LPQDQPSMIQ 206
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 21/156 (13%)
Query: 33 KVKALPVP--VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG--------DRVGGWKP 82
K+ LP P + V+CG ++ L+E G L+++G NS +LGR RVGG
Sbjct: 239 KLVELPEPCKIIQVACGLDHSLALSESGLLFSFGDNSTDQLGREITEDSPIISRVGG--- 295
Query: 83 KLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
+L +++ I G HSLA+ + ++WG+ QLG S + VP +E L
Sbjct: 296 ----DLEGKQVVAIGAGWGHSLAVERCSRAAYTWGWSSGSQLGRSGPSS--VPKKLEELD 349
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
D V+ +A G S A+T K +++ WG ++ +LG+
Sbjct: 350 DPVVS-VAGGRVHSLALTSKHQVWTWGCGRNGRLGL 384
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 43/215 (20%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
L++WG + G+LGLG G + +P K+ AL V VS G + T +G+L
Sbjct: 129 LWSWGSSK-RGQLGLGLGVTRS-----LLPQKIHALAGKSVLQVSLGWGHALACTMDGEL 182
Query: 61 WNWGANSNYELG-------------------RGDR---------------VGGWKPKLLP 86
++WG + + LG R D + W+PKL+
Sbjct: 183 FSWGYHDSGRLGYLLPQDQPSMIQPSKNTLDRNDVGEKMLMEQLRKEDAPILQWEPKLVE 242
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK-VPMVIEALADEFV 145
+IIQ+A G HSLAL++ G +FS+G QLG T++ + V L + V
Sbjct: 243 LPEPCKIIQVACGLDHSLALSESGLLFSFGDNSTDQLGREITEDSPIISRVGGDLEGKQV 302
Query: 146 THIACGGSTSAAVTEKGK-LYMWGNAKDSQLGVPG 179
I G S AV + Y WG + SQLG G
Sbjct: 303 VAIGAGWGHSLAVERCSRAAYTWGWSSGSQLGRSG 337
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWN 62
YTWG G +LG +G S+P K++ L PV +V+ G ++ LT + Q+W
Sbjct: 323 YTWGWSSGS-QLG--------RSGPSSVPKKLEELDDPVVSVAGGRVHSLALTSKHQVWT 373
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVD-----VRIIQIANGGYHSLALT 107
WG N LG +G + + LP LVD +I + G HSL L
Sbjct: 374 WGCGRNGRLG----LGSSRDENLPVLVDSLEEHAEVIDVCCGYDHSLLLA 419
>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
Length = 425
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGG--WKPKLLPNL 88
P +V V VS G + +T +G+L+ WG NS+ +LG G R G P+ + L
Sbjct: 117 PIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCL 176
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH---------SFTQNQKVPMVIEA 139
D R+ +A G HS+A T++G+V SWG G G+LGH S T ++ P +I+
Sbjct: 177 ADSRVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKN 236
Query: 140 LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
L + IA G SA + EKG L+++G + G G ++P VE
Sbjct: 237 LDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSG-DELRPTVVE 285
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 19/194 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+ WGR+ G+LGLG G +S P KV L V V+ G ++ TEEG+
Sbjct: 145 KLFAWGRNS-SGQLGLGKRAGKV----VSTPRKVDCLADSRVKMVALGSEHSIATTEEGE 199
Query: 60 LWNWGANSNYELGRGDRVG---------GWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+ +WGA LG G + + P+L+ NL V+I +IA G HS + + G
Sbjct: 200 VLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKG 259
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+F +G G S ++ P V+E + F +ACGG + VT+ G LY WG+
Sbjct: 260 TLFIFGQKTEKGFGRS--GDELRPTVVEEVP--FSEEVACGGYHTCVVTDSGDLYSWGSN 315
Query: 171 KDSQLGVPGLPVVQ 184
++ LG+ G +V+
Sbjct: 316 ENGCLGLGGTDMVR 329
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Query: 42 AAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY 101
A+++CGG T+ LTE G+++ G N +LG G V + + D ++++++ G +
Sbjct: 76 ASLACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNH 135
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAAVT 159
HS A+T DGK+F+WG GQLG + V P ++ LAD V +A G S A T
Sbjct: 136 HSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATT 195
Query: 160 EKGKLYMWGNAKDSQLG 176
E+G++ WG A +LG
Sbjct: 196 EEGEVLSWGAAGAGRLG 212
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 13/142 (9%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD 90
P+ V+ +P V+CGG+ T V+T+ G L++WG+N N LG G P++L + +
Sbjct: 281 PTVVEEVPFS-EEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLF 339
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGH------------GQLGHSFTQNQKVPMVIE 138
+ + G+ A+ G +++WG+GG GQLGH + PM++E
Sbjct: 340 KFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVE 399
Query: 139 ALADEFVTHIACGGSTSAAVTE 160
+ H++CG + + A+ E
Sbjct: 400 FGKNARAVHVSCGFNHTGAIFE 421
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVR--------IIQIANGGYHSLALTDDGKVFS 114
WG LG G W P P + R +A GG H+L LT+ G+VF+
Sbjct: 37 WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G GQLG + + + + DE V ++ G S AVT GKL+ WG Q
Sbjct: 97 AGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQ 156
Query: 175 LGV 177
LG+
Sbjct: 157 LGL 159
>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 806
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 84/161 (52%), Gaps = 9/161 (5%)
Query: 33 KVKALPVP----VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+V P+P V A++ G + ++ L ++G +W WG N+ +LG G V + +P L
Sbjct: 533 RVTPAPLPGLTGVTALASGTYHSLALKQDGTVWAWGLNNLGQLGDGTTVSRTEQMPVPGL 592
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
DV +A YHSLAL DG V++WGY GQLG T ++ P + L V+ I
Sbjct: 593 TDV--TALAASTYHSLALKQDGTVWTWGYNSSGQLGDGTTASRLTPAQVPGLTG--VSAI 648
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
A G S A+ + G ++ WG D QLG G V P PV+
Sbjct: 649 AAGLVHSLALKQDGTVWAWGRNTDGQLG-NGAAVNSPVPVQ 688
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++TWG + G+LG G A L+ P++V L V+A++ G ++ L ++G +W
Sbjct: 614 VWTWGYNS-SGQLGDG-----TTASRLT-PAQVPGL-TGVSAIAAGLVHSLALKQDGTVW 665
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N++ +LG G V P + L V IA G YHSLAL DG +SWG G G
Sbjct: 666 AWGRNTDGQLGNGAAVNSPVPVQVQGLTGVS--AIAAGSYHSLALKQDGTAWSWGRNGTG 723
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG+ P+ ++ L VT +A G + S A+ G ++ WG + +LG
Sbjct: 724 QLGNETITGSLTPVQVQGL--TAVTALAGGDAHSMALLRDGTVWTWGYNAEGELG 776
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD 90
P +V+ L A+S + T+ L ++G +W WG N + +LG + P LP L
Sbjct: 486 PVQVQGL-TGATALSATAYHTLALAQDGTVWGWGYNDSGQLGDTVDMVRVTPAPLPGLTG 544
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
V +A+G YHSLAL DG V++WG GQLG T ++ M + L D VT +A
Sbjct: 545 V--TALASGTYHSLALKQDGTVWAWGLNNLGQLGDGTTVSRTEQMPVPGLTD--VTALAA 600
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLG 176
S A+ + G ++ WG QLG
Sbjct: 601 STYHSLALKQDGTVWTWGYNSSGQLG 626
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 10/146 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WGR+ +G+LG G A +P +V+ L V+A++ G + ++ L ++G W
Sbjct: 664 VWAWGRNT-DGQLGNG------AAVNSPVPVQVQGL-TGVSAIAAGSYHSLALKQDGTAW 715
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG N +LG G P + L V +A G HS+AL DG V++WGY G
Sbjct: 716 SWGRNGTGQLGNETITGSLTPVQVQGLTAV--TALAGGDAHSMALLRDGTVWTWGYNAEG 773
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTH 147
+LG T ++ P+ ++ L E H
Sbjct: 774 ELGDGTTLDRTAPVRVQGLVLEAGRH 799
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR----I 93
P V ++ GG ++V+ ++G WG N +LG G V + LP V V+
Sbjct: 440 PRRVTWIAAGGAHSLVVRQDGTADAWGHNGYGQLGDGTSV----DRFLPGPVQVQGLTGA 495
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
++ YH+LAL DG V+ WGY GQLG + + P + L VT +A G
Sbjct: 496 TALSATAYHTLALAQDGTVWGWGYNDSGQLGDTVDMVRVTPAPLPGLTG--VTALASGTY 553
Query: 154 TSAAVTEKGKLYMWGNAKDSQLG 176
S A+ + G ++ WG QLG
Sbjct: 554 HSLALKQDGTVWAWGLNNLGQLG 576
>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
porcellus]
Length = 1016
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
Query: 31 PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNL 88
P ++AL +PV VSCG ++ + +G+++ WG S+ +LG G + P+ + L
Sbjct: 72 PEPIQALVNLPVDLVSCGKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKAL 131
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ--LGHSFTQNQKVPMVIEALADEFVT 146
++IIQI+ G YHSLAL+ DG+VFSWG HGQ LG F +Q P + +L +
Sbjct: 132 TGIKIIQISCGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFP-SQASPQRVRSLEGIPLA 190
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A GG+ S A++ G + WGN QL G
Sbjct: 191 QVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSG 223
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 89/157 (56%), Gaps = 7/157 (4%)
Query: 30 IPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV-GGWKPKLLPN 87
IP K+KAL + + +SCG + ++ L+++GQ+++WG NS+ +LG G P+ + +
Sbjct: 124 IPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRS 183
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS----FTQNQKVPMVIEALADE 143
L + + Q+A GG HS AL+ G F WG GQL S Q+ K P + AL +
Sbjct: 184 LEGIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYK-PRSVGALKNL 242
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
V +I+CG +A +T+ +++ +G+ QLG G+
Sbjct: 243 GVVYISCGYEHTAVLTQNDQVFTFGDNSFGQLGHNGV 279
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 93/174 (53%), Gaps = 12/174 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 154 QVFSWGKN-SHGQLGLG-QEFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGT 207
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG NS +L G V +KP+ + L ++ ++ I+ G H+ LT + +VF++G
Sbjct: 208 SFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFG 267
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGN 169
GQLGH+ P ++E + V+ I CG T A V G++ +G
Sbjct: 268 DNSFGQLGHNGVSQTTGPQLVEGIGGP-VSQIDCGSYHTLAYVYTTGQVVSFGR 320
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 64 GANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL 123
G NS +LGR G +P+ + LV++ + ++ G HSLA+ GKVF+WG G GQL
Sbjct: 54 GDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEHSLAVCHKGKVFAWGVGSDGQL 113
Query: 124 GH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G F + +P I+AL + I+CG S A+++ G+++ WG QLG+
Sbjct: 114 GTGKFEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWGKNSHGQLGL 168
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
++Q A+G H+L L + V + G GQLG + K P I+AL + V ++CG
Sbjct: 31 LLQAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGK 90
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
S AV KGK++ WG D QLG
Sbjct: 91 EHSLAVCHKGKVFAWGVGSDGQLGT 115
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D I+ +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIVHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+ GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLG 275
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVTAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT +G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 95/183 (51%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQH--------IVHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + + GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKNGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA----CGGSTSAAVTEKGKL 164
GQLG T N K P ++ A AD F HI GG + + K +
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Query: 165 Y 165
Y
Sbjct: 384 Y 384
>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
Length = 1385
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 1 ELYTWGR-DEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTE 56
+LYTWG G LG G NE +P +V P + V+A+SCG + T ++T
Sbjct: 427 DLYTWGNGTSNSGLLGHG-----NEVSHW-VPKRVNG-PLEGIHVSAISCGPWHTAIVTS 479
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD-------- 108
GQL+ +G S LG GDR P+ + +L +R ++ A G +H+ A+ +
Sbjct: 480 AGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 539
Query: 109 ----DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
GK+F+WG G G+LGH + VP + AL + IACG + A+T G +
Sbjct: 540 SNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHV 599
Query: 165 YMWGNAKDSQLGVPGLPVVQPCPVE 189
Y G+ QLG P + P VE
Sbjct: 600 YTMGSPVYGQLGNPQADGMLPVRVE 624
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 22/181 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+++TWG D +GRLG G + +P+ V AL P ++CG T+ LT G
Sbjct: 546 KIFTWG-DGDKGRLGHG------DKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGH 598
Query: 60 LWNWGANSNYELGRGDRVGGWKP-----KLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
++ G+ +LG + G P KL N V+ +I+ G YH LT +V++
Sbjct: 599 VYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNFVE----EISCGAYHVAVLTSRTEVYT 653
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG G +G+LGH T ++ P ++E+L D+ V + CG + +AA+ ++ W + D
Sbjct: 654 WGKGANGRLGHGDTDDRSSPTLVESLKDKQVRTVVCGINFTAAIC----IHKWVSGVDQS 709
Query: 175 L 175
+
Sbjct: 710 M 710
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A+ + V +SCGG ++T++G++++WG S LG G +PKL+ L ++ I
Sbjct: 352 AVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIEL 411
Query: 96 IANGGYHSLALTDDGKVFSWGYG--GHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGG 152
+A G YH+ A+T G +++WG G G LGH + VP + L V+ I+CG
Sbjct: 412 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGP 471
Query: 153 STSAAVTEKGKLYMWGN 169
+A VT G+L+ +G+
Sbjct: 472 WHTAIVTSAGQLFTFGD 488
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 22/190 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + LS+P +V++L + +CG + T + E
Sbjct: 482 QLFTFG-DGSFGVLGHG------DRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 534
Query: 57 ---------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+++ WG LG GD+ P + LV+ QIA G ++ALT
Sbjct: 535 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALT 594
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYM 166
G V++ G +GQLG+ + +P+ +E L FV I+CG A +T + ++Y
Sbjct: 595 TSGHVYTMGSPVYGQLGNP-QADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYT 653
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 654 WGKGANGRLG 663
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L V + + I+ GG H+ +T G+++SWG G+LGH + P +I+ALA
Sbjct: 346 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 405
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ + +ACG + AVT G LY WGN
Sbjct: 406 NMNIELVACGEYHTCAVTLSGDLYTWGN 433
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D I+ +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIVHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQH--------IVHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEEDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA 149
GQLG T N K P ++ A AD F HI
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIV 364
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S +++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3996 DVYLWG----AGRHGQLAEAGRNVMVPATAPSFSQA-----QQVICGQNCTFVIQANGTV 4046
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4166
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4055 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4171
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4172 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4219
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4207 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4261 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4320
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + + I+ G SAA T
Sbjct: 4321 LGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4152 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4204
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4205 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4264
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4265 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4323
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|355715920|gb|AES05445.1| regulator of chromosome condensation and BTB domain containing
protein 1 [Mustela putorius furo]
Length = 143
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
Query: 37 LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQ 95
L V V+CG +M L +G+++ WG N+ ++G G P+ + N + + R++
Sbjct: 6 LIKQVVEVACGRHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVG 65
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTS 155
IA G S+A+ D+G+V+ WGY G+GQLG NQ P+ + AL V I CG + +
Sbjct: 66 IACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHT 125
Query: 156 AAVTEKGKLYMWG 168
A+T++G LY WG
Sbjct: 126 LALTDEGLLYAWG 138
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM-VIEALAD 142
+ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P V L
Sbjct: 1 VCTNLLIKQVVEVACGRHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHI 60
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ V IACG ++S AV + G++Y WG + QLG+
Sbjct: 61 KRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 95
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 1 ELYTWGRDE-GEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEE 57
E++ WG + G+ +G G N+ P KV L + V ++CG +M + +
Sbjct: 28 EVFAWGYNNCGQ----VGSGSTTNQ----PTPRKVTNCLHIKRVVGIACGQTSSMAVLDN 79
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 80 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGA 139
Query: 118 GGHG 121
+G
Sbjct: 140 NTYG 143
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P+ + L + V+CG F++ L++ G +
Sbjct: 1624 VWSWG-DGDYGKLGRGG------SDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGV 1676
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG Y LG G +PKL+ +L +++++++ G H +A D+G V++WG
Sbjct: 1677 YTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDE 1736
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ+G TQ ++P ++ AL ++H++CG + + A
Sbjct: 1737 GQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTVA 1773
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG G + G +P V+ L V + CG F++ L+ G +
Sbjct: 642 VYSWG-DGDFGKLGRGG------SDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLV 694
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G +P+++ L + +++ +A G H LA+T+ G+VF+WG H
Sbjct: 695 WTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDH 754
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
GQ G+ T + PM ++ L +T +ACG S S A +
Sbjct: 755 GQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAFAD 794
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 100/174 (57%), Gaps = 15/174 (8%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLG+G NE+ ++IP+ ++++ + +V+ GG + L+ EG++++WG +
Sbjct: 1469 GRLGIGS----NES--VAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVD 1522
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R P+++ +L I+++A GG HS A+ G +++WG G +G+LGH +
Sbjct: 1523 GKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDS 1582
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTE----KGKLYMWGNAKDSQLG 176
++Q P ++ AL D V +ACG + + +TE ++ WG+ +LG
Sbjct: 1583 EDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG 1636
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGP-NEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
++Y G + GRLGLGP G + + P +K L AV GG M LT +G
Sbjct: 482 KVYACG-ESTSGRLGLGPVTGSVSRLTQVLFPQPIKKL-----AVHSGGRHAMALTYDGH 535
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG +LG G R P+ + + I I+ G HS A+ G +++WG+G
Sbjct: 536 VYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGM 595
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLGV 177
+G+LGH P ++AL+ + V +ACG + + +T+ G +Y WG+ +LG
Sbjct: 596 YGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGR 655
Query: 178 PGLP-VVQPCPVE 189
G P PVE
Sbjct: 656 GGSDGCCVPKPVE 668
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 93/184 (50%), Gaps = 10/184 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEEG 58
LYTWG GRLG G L P V+AL V V+CG T+ LT++G
Sbjct: 588 LYTWGHGM-YGRLGHGNNHT------LLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDG 640
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG +LGRG G PK + L +++I G SLAL+ G V++WG G
Sbjct: 641 LVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKG 700
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+ +LGH Q+ + P V+E L + V +A G AVTE G+++ WG+ Q G
Sbjct: 701 DYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNG 760
Query: 179 GLPV 182
G V
Sbjct: 761 GTTV 764
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 14/182 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGG--FFTMVLTE-- 56
LYTWG+ GR G G ++ P V AL V V+CG T+ +TE
Sbjct: 1566 LYTWGK----GRYG---RLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGT 1618
Query: 57 --EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
+W+WG +LGRG G P ++ L+ I +A G SLAL+ G V++
Sbjct: 1619 GGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYT 1678
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG G + +LGH ++ + P +IE+L V ++ G A + G +Y WG+ + Q
Sbjct: 1679 WGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQ 1738
Query: 175 LG 176
+G
Sbjct: 1739 IG 1740
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P P+L ++ IQ+ G +T +GKVF+ GY
Sbjct: 1406 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATGY 1465
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIA--CGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG ++ +P +IE++ +T ++ GG A++ +G++Y WG D +L
Sbjct: 1466 GAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKL 1525
Query: 176 G 176
G
Sbjct: 1526 G 1526
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 66/186 (35%), Gaps = 54/186 (29%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK------ 111
+++ WG N +LG P +L +++ Q+ G A+T GK
Sbjct: 429 AKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGE 488
Query: 112 -----------------------------------------------VFSWGYGGHGQLG 124
V+SWG G G+LG
Sbjct: 489 STSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLG 548
Query: 125 HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV-PGLPVV 183
H + P IE ++ + I+CG S SAA+ G LY WG+ +LG ++
Sbjct: 549 HGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLL 608
Query: 184 QPCPVE 189
+P PV+
Sbjct: 609 KPKPVQ 614
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S +++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 4007 DVYLWG----AGRHGQLAEAGRNVMVPATAPSFSQA-----QQVICGQNCTFVIQANGTV 4057
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4058 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4117
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4118 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4177
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4066 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4122
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4123 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4182
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4183 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4230
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4218 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4271
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4272 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4331
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + + I+ G SAA T
Sbjct: 4332 LGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4368
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4163 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4215
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4216 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4275
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4276 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4334
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|348506950|ref|XP_003441020.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like
[Oreochromis niloticus]
Length = 651
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 8/166 (4%)
Query: 16 LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGR 73
LG G G + +P K+ L VA++S G G ++ T++GQL+ WG N +LG
Sbjct: 174 LGTGDGLSTV----MPKKLDFLRGKKVASLSYGSGPHVLLATDDGQLFAWGHNGYSQLGN 229
Query: 74 GDRVGGWKPKLL-PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
G G P L+ NL + ++ +++ G +HS+ALT DG+VF+WGY GQ+G T NQ
Sbjct: 230 GSTNPGLSPVLITANLQNKKVKEVSCGSHHSMALTLDGEVFAWGYNNCGQIGSGSTANQP 289
Query: 133 VPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
P V L + + I CG ++S A+ + G++Y WG + QLG+
Sbjct: 290 YPRKVTGCLQGKNASGITCGQTSSMALVDNGEVYGWGYNGNGQLGI 335
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
++CG +M L + G+++ WG N N +LG G+ P + L + I QI +G H
Sbjct: 306 ITCGQTSSMALVDNGEVYGWGYNGNGQLGIGNNGNQLTPCRVAALQGMCIQQIVSGYGHC 365
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKG 162
LALTD G +++WG +GQLG N P+ I A + V AC + TSAA T+ G
Sbjct: 366 LALTDKGLLYAWGANTYGQLGTGTKSNHLSPVHIMADKERVVEVAACHSTHTSAAKTQSG 425
Query: 163 KLYMWGNAKDSQLGVPGL 180
+++MWG + + +P L
Sbjct: 426 QVFMWGQCRGQSIVLPHL 443
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T +++ +G N + LG GD + PK L L ++ ++ G G H L TDDG
Sbjct: 155 IYITHGNEVFVFGLNCSSCLGTGDGLSTVMPKKLDFLRGKKVASLSYGSGPHVLLATDDG 214
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
++F+WG+ G+ QLG+ T P++I A L ++ V ++CG S A+T G+++ WG
Sbjct: 215 QLFAWGHNGYSQLGNGSTNPGLSPVLITANLQNKKVKEVSCGSHHSMALTLDGEVFAWGY 274
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 275 NNCGQIG-SGSTANQPYP 291
>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
Length = 1086
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 1 ELYTWGR-DEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTE 56
+LYTWG G LG G NE +P +V P + V+A+SCG + T ++T
Sbjct: 382 DLYTWGNGTSNSGLLGHG-----NEVSHW-VPKRVNG-PLEGIHVSAISCGPWHTAIVTS 434
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD-------- 108
GQL+ +G S LG GDR P+ + +L +R ++ A G +H+ A+ +
Sbjct: 435 AGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 494
Query: 109 ----DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
GK+F+WG G G+LGH + VP + AL + IACG + A+T G +
Sbjct: 495 SNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHV 554
Query: 165 YMWGNAKDSQLGVPGLPVVQPCPVE 189
Y G+ QLG P + P VE
Sbjct: 555 YTMGSPVYGQLGNPQADGMLPVRVE 579
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 22/181 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+++TWG D +GRLG G + +P+ V AL P ++CG T+ LT G
Sbjct: 501 KIFTWG-DGDKGRLGHG------DKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGH 553
Query: 60 LWNWGANSNYELGRGDRVGGWKP-----KLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
++ G+ +LG + G P KL N V+ +I+ G YH LT +V++
Sbjct: 554 VYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNFVE----EISCGAYHVAVLTSRTEVYT 608
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG G +G+LGH T ++ P ++EAL D+ V + CG + +AA+ ++ W + D
Sbjct: 609 WGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAIC----IHKWVSGVDQS 664
Query: 175 L 175
+
Sbjct: 665 M 665
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A+ + V +SCGG ++T++G++++WG S LG G +PKL+ L ++ I
Sbjct: 307 AVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIEL 366
Query: 96 IANGGYHSLALTDDGKVFSWGYG--GHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGG 152
+A G YH+ A+T G +++WG G G LGH + VP + L V+ I+CG
Sbjct: 367 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGP 426
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A VT G+L+ +G D GV G
Sbjct: 427 WHTAIVTSAGQLFTFG---DGSFGVLG 450
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 22/190 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + LS+P +V++L + +CG + T + E
Sbjct: 437 QLFTFG-DGSFGVLGHG------DRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 489
Query: 57 ---------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+++ WG LG GD+ P + LV+ QIA G ++ALT
Sbjct: 490 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALT 549
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYM 166
G V++ G +GQLG+ + +P+ +E L FV I+CG A +T + ++Y
Sbjct: 550 TSGHVYTMGSPVYGQLGNP-QADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYT 608
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 609 WGKGANGRLG 618
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L V + + I+ GG H+ +T G+++SWG G+LGH + P +I+ALA
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ + +ACG + AVT G LY WGN
Sbjct: 361 NMNIELVACGEYHTCAVTLSGDLYTWGN 388
>gi|307204787|gb|EFN83345.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Harpegnathos saltator]
Length = 1665
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 71/124 (57%)
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
L ++ WGA+ +LG G + P+L+ +L I+ G YHS+ALT DG+VF
Sbjct: 655 LVTNNGIYVWGASQFGQLGLGKVLQCSSPELVTSLAQEIIVDAVAGQYHSVALTADGRVF 714
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
+WG+G HGQLGH T + +P ++ +L V HI+ G + + A++ G +Y +G
Sbjct: 715 TWGWGVHGQLGHGNTDEKSIPTLVTSLLGVVVCHISAGYAHTLALSVDGFVYAFGCNVLG 774
Query: 174 QLGV 177
QLGV
Sbjct: 775 QLGV 778
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEEGQ 59
+Y WG + G+LGLG + S P V +L + V AV+ G + ++ LT +G+
Sbjct: 661 IYVWGASQF-GQLGLG------KVLQCSSPELVTSLAQEIIVDAVA-GQYHSVALTADGR 712
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG + +LG G+ P L+ +L+ V + I+ G H+LAL+ DG V+++G
Sbjct: 713 VFTWGWGVHGQLGHGNTDEKSIPTLVTSLLGVVVCHISAGYAHTLALSVDGFVYAFGCNV 772
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GQLG +PM + E + I+ G + V+ KLY WG
Sbjct: 773 LGQLGVGSNNKSSIPMKVS--LPEGIKLISTGYFHNLVVSNTNKLYTWG 819
Score = 40.0 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 81 KPKLL-PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP 134
KP ++ +LV +I QI+ G +H+ +T DG +++WG GQ+G+ ++ +P
Sbjct: 917 KPSVVDTSLVKGQITQISAGCHHNALITKDGSLYTWGRNFDGQIGNGTRRDVPIP 971
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P+ + L + V+CG F++ L++ G +
Sbjct: 1625 VWSWG-DGDYGKLGRGG------SDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGV 1677
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG Y LG G +PKL+ +L +++++++ G H +A D+G V++WG
Sbjct: 1678 YTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDE 1737
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ+G TQ ++P ++ AL ++H++CG + + A
Sbjct: 1738 GQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTVA 1774
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG D G+LG G + G +P V+ L V + CG F++ L+ G +
Sbjct: 643 VYSWG-DGDFGKLGRGG------SDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLV 695
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G +P+++ L + +++ +A G H LA+T+ G+VF+WG H
Sbjct: 696 WTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDH 755
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
GQ G+ T + PM ++ L +T +ACG S S A +
Sbjct: 756 GQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAFAD 795
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 100/174 (57%), Gaps = 15/174 (8%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLG+G NE+ ++IP+ ++++ + +V+ GG + L+ EG++++WG +
Sbjct: 1470 GRLGIGS----NES--VAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVD 1523
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R P+++ +L I+++A GG HS A+ G +++WG G +G+LGH +
Sbjct: 1524 GKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDS 1583
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTE----KGKLYMWGNAKDSQLG 176
++Q P ++ AL D V +ACG + + +TE ++ WG+ +LG
Sbjct: 1584 EDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG 1637
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGP-NEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
++Y G + GRLGLGP G + + P +K L AV GG M LT +G
Sbjct: 483 KVYACG-ESTSGRLGLGPVTGSVSRLTQVLFPQPIKKL-----AVHSGGRHAMALTYDGH 536
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG +LG G R P+ + + I I+ G HS A+ G +++WG+G
Sbjct: 537 VYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGM 596
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLGV 177
+G+LGH P ++AL+ + V +ACG + + +T+ G +Y WG+ +LG
Sbjct: 597 YGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGR 656
Query: 178 PGLP-VVQPCPVE 189
G P PVE
Sbjct: 657 GGSDGCCVPKPVE 669
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 93/184 (50%), Gaps = 10/184 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGF--FTMVLTEEG 58
LYTWG GRLG G L P V+AL V V+CG T+ LT++G
Sbjct: 589 LYTWGHGM-YGRLGHGNNHT------LLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDG 641
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG +LGRG G PK + L +++I G SLAL+ G V++WG G
Sbjct: 642 LVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKG 701
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+ +LGH Q+ + P V+E L + V +A G AVTE G+++ WG+ Q G
Sbjct: 702 DYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNG 761
Query: 179 GLPV 182
G V
Sbjct: 762 GTTV 765
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 14/182 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGG--FFTMVLTE-- 56
LYTWG+ GR G G ++ P V AL V V+CG T+ +TE
Sbjct: 1567 LYTWGK----GRYG---RLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGT 1619
Query: 57 --EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
+W+WG +LGRG G P ++ L+ I +A G SLAL+ G V++
Sbjct: 1620 GGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYT 1679
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG G + +LGH ++ + P +IE+L V ++ G A + G +Y WG+ + Q
Sbjct: 1680 WGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQ 1739
Query: 175 LG 176
+G
Sbjct: 1740 IG 1741
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P P+L ++ IQ+ G +T +GKVF+ GY
Sbjct: 1407 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATGY 1466
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIA--CGGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG ++ +P +IE++ +T ++ GG A++ +G++Y WG D +L
Sbjct: 1467 GAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKL 1526
Query: 176 G 176
G
Sbjct: 1527 G 1527
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 66/186 (35%), Gaps = 54/186 (29%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK------ 111
+++ WG N +LG P +L +++ Q+ G A+T GK
Sbjct: 430 AKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGE 489
Query: 112 -----------------------------------------------VFSWGYGGHGQLG 124
V+SWG G G+LG
Sbjct: 490 STSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLG 549
Query: 125 HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV-PGLPVV 183
H + P IE ++ + I+CG S SAA+ G LY WG+ +LG ++
Sbjct: 550 HGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLL 609
Query: 184 QPCPVE 189
+P PV+
Sbjct: 610 KPKPVQ 615
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S +++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3996 DVYLWG----AGRHGQLAEAGRNVMVPATAPSFSQA-----QQVICGQNCTFVIQANGTV 4046
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4166
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4055 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4171
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4172 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4219
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4207 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4261 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4320
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + + I+ G SAA T
Sbjct: 4321 LGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4152 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4204
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4205 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4264
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4265 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4323
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S +++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3996 DVYLWG----AGRHGQLAEAGRNVMVPATAPSFSQA-----QQVICGQNCTFVIQANGTV 4046
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4166
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4055 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4171
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4172 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4219
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4207 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4261 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4320
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + + I+ G SAA T
Sbjct: 4321 LGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4152 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4204
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4205 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4264
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4265 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4323
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa]
gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa]
Length = 1061
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++TWG + G GRLG G G+ + L I ++ L V A+V+CG + T ++T GQL
Sbjct: 298 EVFTWGEESG-GRLGHGAGKDVIQPC-LRISGPLEGLQV--ASVTCGPWHTALVTSMGQL 353
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD-----------D 109
+ +G + LG G+R P+ + +L +R I +A G +H+ A+ +
Sbjct: 354 FTFGDGTFGVLGHGNRENVAYPREVESLAGLRTIAVACGVWHTAAVVEVIVTQSSSSASS 413
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
GK+F+WG G +LGH + + P + AL D IACG S + +T G ++ G+
Sbjct: 414 GKLFTWGDGDKNRLGHGDKEPRLEPTCVPALIDYNFHKIACGHSLTVGLTTAGHVFTMGS 473
Query: 170 AKDSQLGVPGLPVVQPCPVE 189
QLG P PC VE
Sbjct: 474 TVYGQLGNPCADGKVPCLVE 493
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L+TWG D + RLG G E P+ V AL ++CG T+ LT G
Sbjct: 415 KLFTWG-DGDKNRLGHGDKEPRLE------PTCVPALIDYNFHKIACGHSLTVGLTTAGH 467
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+ +LG G + L + +IA G YH ALT +V++WG G
Sbjct: 468 VFTMGSTVYGQLGNPCADGKVPCLVEDKLYGESVEEIACGAYHVAALTSRNEVYTWGKGA 527
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
+G+LGH +++K P ++EAL D V +IACG + SAA+
Sbjct: 528 NGRLGHGDGEDRKTPTIVEALKDRHVKYIACGANYSAAI 566
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 96/190 (50%), Gaps = 23/190 (12%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE-- 56
+L+T+G +G G LG G N ++ P +V++L + AV+CG + T + E
Sbjct: 352 QLFTFG----DGTFGVLGHGNREN----VAYPREVESLAGLRTIAVACGVWHTAAVVEVI 403
Query: 57 ---------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+L+ WG LG GD+ +P +P L+D +IA G ++ LT
Sbjct: 404 VTQSSSSASSGKLFTWGDGDKNRLGHGDKEPRLEPTCVPALIDYNFHKIACGHSLTVGLT 463
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYM 166
G VF+ G +GQLG+ + KVP ++E L E V IACG AA+T + ++Y
Sbjct: 464 TAGHVFTMGSTVYGQLGNPCA-DGKVPCLVEDKLYGESVEEIACGAYHVAALTSRNEVYT 522
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 523 WGKGANGRLG 532
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN--LVDVRIIQI 96
+ V ++CG ++T +G+++ WG S LG G +P L + L +++ +
Sbjct: 278 LDVHHIACGVRHAAMVTRQGEVFTWGEESGGRLGHGAGKDVIQPCLRISGPLEGLQVASV 337
Query: 97 ANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
G +H+ +T G++F++G G G LGH +N P +E+LA +ACG +A
Sbjct: 338 TCGPWHTALVTSMGQLFTFGDGTFGVLGHGNRENVAYPREVESLAGLRTIAVACGVWHTA 397
Query: 157 AVTE-----------KGKLYMWGNAKDSQLG 176
AV E GKL+ WG+ ++LG
Sbjct: 398 AVVEVIVTQSSSSASSGKLFTWGDGDKNRLG 428
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 66 NSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH 125
N++Y R D + P+ L + V + + IA G H+ +T G+VF+WG G+LGH
Sbjct: 256 NTSYLSTRADVL---LPRPLESNVVLDVHHIACGVRHAAMVTRQGEVFTWGEESGGRLGH 312
Query: 126 SFTQNQKVPMV-----IEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
++ P + +E L V + CG +A VT G+L+ +G+
Sbjct: 313 GAGKDVIQPCLRISGPLEGLQ---VASVTCGPWHTALVTSMGQLFTFGD 358
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 133 VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV-PGLPVVQPC 186
+P +E+ V HIACG +A VT +G+++ WG +LG G V+QPC
Sbjct: 268 LPRPLESNVVLDVHHIACGVRHAAMVTRQGEVFTWGEESGGRLGHGAGKDVIQPC 322
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D I+ +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIVHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EYPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 16/182 (8%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQH--------IVHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
HGQLG +Q P + +L + +A GG+ S A++ G ++ WG QL
Sbjct: 163 KNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQL 222
Query: 176 GV 177
G+
Sbjct: 223 GL 224
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEEDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA 149
GQLG T N K P ++ A AD F HI
Sbjct: 324 KGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIV 364
>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 13/163 (7%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
+L+TWG D + RLG G P P L + ++CG T+ LT
Sbjct: 267 KLFTWG-DGDKHRLGHGDKEPRLKPTCVASL--------IDYDFHRIACGHSLTVGLTTS 317
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++ + G +LG R G P L+ +V ++Q+A G YH LT +VF+WG
Sbjct: 318 GKVLSMGNTVYGQLG-NPRSDGKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGK 376
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
G +G+LGH +++K+P ++EAL D V HIACG + +AA+ +
Sbjct: 377 GANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFTAAICQ 419
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 20/203 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVK-ALP-VPVAAVSCGGFFTMVLTEE 57
ELYTWG +G +GL G G+ + IP ++ AL + VA VSCG + T ++T
Sbjct: 149 ELYTWG--DGTHNVGLLGHGKDVSHW----IPKRIAGALEGLAVAYVSCGTWHTALITTM 202
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G + LG G+R PK + +L ++ I +A G +H+ A+ +
Sbjct: 203 GQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSS 262
Query: 109 --DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
GK+F+WG G +LGH + + P + +L D IACG S + +T GK+
Sbjct: 263 ISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTSGKVLS 322
Query: 167 WGNAKDSQLGVPGLPVVQPCPVE 189
GN QLG P PC VE
Sbjct: 323 MGNTVYGQLGNPRSDGKIPCLVE 345
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 98/188 (52%), Gaps = 20/188 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G +G G+ G G E+ +S P +V++L + +V+CG + T + E
Sbjct: 204 QLFTFG----DGTFGV-LGHGNRES--ISCPKEVESLSGLKTISVACGVWHTAAIVEVIV 256
Query: 57 --------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+L+ WG + LG GD+ KP + +L+D +IA G ++ LT
Sbjct: 257 TQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTT 316
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GKV S G +GQLG+ + + K+P ++E + E V +ACG A +T K +++ WG
Sbjct: 317 SGKVLSMGNTVYGQLGNPRS-DGKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWG 375
Query: 169 NAKDSQLG 176
+ +LG
Sbjct: 376 KGANGRLG 383
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 22/191 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
E++TWG + G GRLG G P +++L V V V+CG F T +T G+
Sbjct: 97 EVFTWGEESG-GRLGHGSREDSIH------PRLIESLAVCNVDIVACGEFHTCAVTTAGE 149
Query: 60 LWNWGANSNYE--LGRGDRVGGWKPKLLPNLVD-VRIIQIANGGYHSLALTDDGKVFSWG 116
L+ WG ++ LG G V W PK + ++ + + ++ G +H+ +T G++F++G
Sbjct: 150 LYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFG 209
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE-----------KGKLY 165
G G LGH ++ P +E+L+ +ACG +AA+ E GKL+
Sbjct: 210 DGTFGVLGHGNRESISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLF 269
Query: 166 MWGNAKDSQLG 176
WG+ +LG
Sbjct: 270 TWGDGDKHRLG 280
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 6/139 (4%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
V CG + ++T+ G+++ WG S LG G R P+L+ +L + +A G +H+
Sbjct: 82 VDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHT 141
Query: 104 LALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTE 160
A+T G++++WG G H G LGH + +P I AL V +++CG +A +T
Sbjct: 142 CAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITT 201
Query: 161 KGKLYMWGNAKDSQLGVPG 179
G+L+ +G D GV G
Sbjct: 202 MGQLFTFG---DGTFGVLG 217
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%)
Query: 76 RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
R +PK L + + + + G HS +T +G+VF+WG G+LGH ++ P
Sbjct: 62 RTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPR 121
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+IE+LA V +ACG + AVT G+LY WG+
Sbjct: 122 LIESLAVCNVDIVACGEFHTCAVTTAGELYTWGD 155
>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
Length = 2041
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 13/181 (7%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++ WG G G LG GR L P+++ + ++ G + ++ L + Q+
Sbjct: 320 VFIWGM----GSQGCLGNGR----VDDLETPTQIDISGLFFNEIAAGAYHSLALAKNNQV 371
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ---IANGGYHSLALTDDGKVFSWGY 117
+ WG N+ +LG G++ PK L D + IQ + G HS +T + ++++WG
Sbjct: 372 YGWGVNNRGQLGIGNKENQLLPKQL-TFFDRKKIQCQYLYCGDQHSACITTNKELYTWGN 430
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G + +LGH ++ P IE L D +V +A G S +T +G +Y WG++KDS LG+
Sbjct: 431 GDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHSLCITNEGFVYAWGSSKDSVLGM 490
Query: 178 P 178
P
Sbjct: 491 P 491
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG + G+LG+G L+ + K + + CG + +T +L
Sbjct: 370 QVYGWGVNN-RGQLGIGNKENQLLPKQLTFFDRKK---IQCQYLYCGDQHSACITTNKEL 425
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG Y LG G + +PK + L DV ++ +A G HSL +T++G V++WG
Sbjct: 426 YTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHSLCITNEGFVYAWGSSKD 485
Query: 121 GQLGHSFTQ------NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
LG Q Q+V ++ ++ D +A G S S +++E G LY+WG+ K+S
Sbjct: 486 SVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSENGHLYVWGSNKNSL 545
Query: 175 LGV 177
LGV
Sbjct: 546 LGV 548
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRG---DRVGGWKPKLLPNLVDVRIIQIA-NG 99
+SC + +T +G + WG+N +LG G D V + P LL ++ ++I +A G
Sbjct: 693 ISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHV--FTPILLEGAIEQKVIIMAITG 750
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD-EFVTHIACGGSTSAAV 158
S LTD G+V+S+G G LGH +N V M + D + ++AC T A+
Sbjct: 751 EKFSALLTDQGEVWSFGTSEFGVLGHEL-KNFYVIMEPRMINDIPSMINLACSNQTMFAI 809
Query: 159 TEKGKLYMWGNAKDSQLGV 177
+K +L+ WGN + QLG+
Sbjct: 810 DQKQQLWAWGNNQFGQLGI 828
Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 5 WGRDEGEGRLGLGPGRGPNEAGGLSI-----PSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
WG + GRLG + PNE+ +I PS++ FT ++
Sbjct: 225 WG-NPANGRLGAPKSKFPNESDKQTIFNNNNPSQMD--------------FTSRQMQQPS 269
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
NS Y L + + + P + ++I G +H++ALT++G VF WG G
Sbjct: 270 RTQQVQNSQYNLNQAEPNN--SDFIQPIALKQEFVKIVCGHHHTMALTEEGAVFIWGMGS 327
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G LG+ + + P I+ ++ F IA G S A+ + ++Y WG QLG+
Sbjct: 328 QGCLGNGRVDDLETPTQID-ISGLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGI 384
>gi|422295033|gb|EKU22332.1| phosphatidylinositide phosphatase sac1 [Nannochloropsis gaditana
CCMP526]
Length = 1021
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 109/235 (46%), Gaps = 74/235 (31%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LYTWG D +LG G ++ + P +V+AL V + V+CG F T + E+G+
Sbjct: 707 KLYTWG-DGSNHKLGHG------DSKPVYRPRQVEALQDVKIVKVACGDFHTAAIDEDGR 759
Query: 60 LWNWG-----ANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDDGKV 112
LW WG LG GD +PK++ +LVD R+ +A G H+L LTDDG+V
Sbjct: 760 LWTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDYGCRVGSVACGEKHTLILTDDGEV 819
Query: 113 FSWGYGGHGQL----------------------------GHSF----TQNQK-------- 132
+ G G +G+L GH+F TQ+ K
Sbjct: 820 LTAGNGEYGRLGNGGSSDHGVPEPVELFDEKTNIVEVAAGHAFNLVLTQDGKIFTWGRNE 879
Query: 133 -------------------VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
VP+++EAL + V H+A G S SAAVTE+G+LYMWG
Sbjct: 880 QGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSAAVTEEGELYMWG 934
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 76/130 (58%), Gaps = 7/130 (5%)
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
+TE+G+L+ WG SN++LG GD ++P+ + L DV+I+++A G +H+ A+ +DG+++
Sbjct: 702 VTEDGKLYTWGDGSNHKLGHGDSKPVYRPRQVEALQDVKIVKVACGDFHTAAIDEDGRLW 761
Query: 114 SWGYGGHGQLGHSFTQ-----NQKVPMVIEALADE--FVTHIACGGSTSAAVTEKGKLYM 166
+WG+GG G Q P V+ +L D V +ACG + +T+ G++
Sbjct: 762 TWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDYGCRVGSVACGEKHTLILTDDGEVLT 821
Query: 167 WGNAKDSQLG 176
GN + +LG
Sbjct: 822 AGNGEYGRLG 831
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+ +A G +S +T+DGK+++WG G + +LGH ++ P +EAL D + +ACG
Sbjct: 689 FVDLAAGLNYSAGVTEDGKLYTWGDGSNHKLGHGDSKPVYRPRQVEALQDVKIVKVACGD 748
Query: 153 STSAAVTEKGKLYMWG 168
+AA+ E G+L+ WG
Sbjct: 749 FHTAAIDEDGRLWTWG 764
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 22/172 (12%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLG G + G+ P ++ + V+ G F +VLT++G+++ WG N +L
Sbjct: 828 GRLG----NGGSSDHGVPEPVELFDEKTNIVEVAAGHAFNLVLTQDGKIFTWGRNEQGQL 883
Query: 72 GRGDRVGG--WKPKLLPNLVDV----RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH 125
G G + + + +P LV+ +++ +A G HS A+T++G+++ WG H +
Sbjct: 884 GLGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSAAVTEEGELYMWGMKIHLE--- 940
Query: 126 SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG-KLYMWGNAKDSQLG 176
P V + V + CGGS +A VTE +L+ +G LG
Sbjct: 941 --------PQVFRVGEGDKVWQVGCGGSHTAVVTEDAHQLFTFGKGSSLCLG 984
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 20/99 (20%)
Query: 111 KVFSWGYGGHGQLGHSFTQN------------QKVPMVIEALADEFVTH-------IACG 151
+VF+WG G GQLGHS Q +++ + E + H +A G
Sbjct: 636 RVFAWGQGTEGQLGHSPIQKSALTGAYVELSPRELRLDTEQDQQKIEKHNPWGFVDLAAG 695
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLGV-PGLPVVQPCPVE 189
+ SA VTE GKLY WG+ + +LG PV +P VE
Sbjct: 696 LNYSAGVTEDGKLYTWGDGSNHKLGHGDSKPVYRPRQVE 734
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 44 VSCGGFFTMVLTEEG-QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-IIQIANGGY 101
V CGG T V+TE+ QL+ +G S+ LG G R PKL+ + + R ++++A G
Sbjct: 955 VGCGGSHTAVVTEDAHQLFTFGKGSSLCLGHGTRSYTPHPKLVADGLAGRGVVKVACGHR 1014
Query: 102 HSLALTD 108
H +TD
Sbjct: 1015 HMAVITD 1021
>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
Length = 1203
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S +++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|403353075|gb|EJY76071.1| hypothetical protein OXYTRI_02425 [Oxytricha trifallax]
Length = 794
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 25/198 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEE-GQ 59
+Y+WG G G G NE + P +V+ + + +S GGF T+ L EE +
Sbjct: 334 VYSWGGGGASYNKG-QCGHGNNE--DIEQPIQVQGIAHRKIVQISAGGFHTLALCEEDNE 390
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV--------------------RIIQIANG 99
L+ WG+ + E G G+ KPK++ D I QI+ G
Sbjct: 391 LYAWGSGTYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISAG 450
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
G+H+L LT G+V+S+GYG HGQLG T+N P +++ L + + IA G + S ++
Sbjct: 451 GHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFCSPQLVKDLLSKNIKAIAAGWNHSLILS 510
Query: 160 EKGKLYMWGNAKDSQLGV 177
+KG L+ G QLG+
Sbjct: 511 DKGDLFACGYGNHGQLGL 528
Score = 84.0 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 97/191 (50%), Gaps = 22/191 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEA--------GGLSIPSKVKALPVPVAAVSCGGFFTM 52
ELY G + G+LG+ G + + G+ + KVK V+CG + T+
Sbjct: 222 ELYVSG-SQLHGKLGIQSVNGMHVSKFTQVTMFDGIKVNQKVKQ-------VACGDYHTL 273
Query: 53 VLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L ++GQ++ WG + ++G + + +P+++ L +I+ I G +HS+AL G+
Sbjct: 274 CLMQDGQVFAWGGTLHKKVGEKNAQAQNNEPRIVSGLQGKQIVHIDCGDFHSVALDIQGR 333
Query: 112 VFSWGYGG----HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYM 166
V+SWG GG GQ GH ++ + P+ ++ +A + I+ GG T A E +LY
Sbjct: 334 VYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALCEEDNELYA 393
Query: 167 WGNAKDSQLGV 177
WG+ + G+
Sbjct: 394 WGSGTYGECGL 404
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 19/172 (11%)
Query: 21 GPNEAGGLSIPS-KVKALPVPVAA-----------VSCGGFFTMVLTEEGQLWNWGANSN 68
G N G L I S K + LP P++ +S G + ++T+ G+L+ G+ +
Sbjct: 172 GKNSDGELGISSQKDQFLPKPISIQNLKLSHTAKYISSGSHHSAIVTKAGELYVSGSQLH 231
Query: 69 YELG----RGDRVGGWKPKLLPNLVDV--RIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+LG G V + + + + V ++ Q+A G YH+L L DG+VF+WG H +
Sbjct: 232 GKLGIQSVNGMHVSKFTQVTMFDGIKVNQKVKQVACGDYHTLCLMQDGQVFAWGGTLHKK 291
Query: 123 LGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
+G Q Q P ++ L + + HI CG S A+ +G++Y WG S
Sbjct: 292 VGEKNAQAQNNEPRIVSGLQGKQIVHIDCGDFHSVALDIQGRVYSWGGGGAS 343
Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 23/140 (16%)
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ-------IANGGYHSLA 105
+ T++ +W++G NS+ ELG + K + LP + ++ ++ I++G +HS
Sbjct: 161 IKTKKAYIWSFGKNSDGELG----ISSQKDQFLPKPISIQNLKLSHTAKYISSGSHHSAI 216
Query: 106 LTDDGKVFSWGYGGHGQLG---------HSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
+T G+++ G HG+LG FTQ V M ++ V +ACG +
Sbjct: 217 VTKAGELYVSGSQLHGKLGIQSVNGMHVSKFTQ---VTMFDGIKVNQKVKQVACGDYHTL 273
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
+ + G+++ WG ++G
Sbjct: 274 CLMQDGQVFAWGGTLHKKVG 293
>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
davidii]
Length = 1369
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 106/180 (58%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG + EG++GL N + P +V + P+A +SCG + + +T EG+L
Sbjct: 154 KLFMWGENS-EGQIGL------NNVCNVYFPHEV-TVGKPIAWISCGYYHSAFVTMEGEL 205
Query: 61 WNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G +LG ++ P+L+P + + ++IQ+A GG H++ LT+ V+++G G
Sbjct: 206 YTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPE-KVIQVACGGGHTVVLTEKA-VYNFGLG 263
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P ++E++ D +T+I+CG + +A +T+ G++Y +G+ + +LG+
Sbjct: 264 QFGQLGLGTFVFETTEPKIMESVKDHKITYISCGENHTALITDIGRMYTFGDGRYGKLGL 323
Score = 84.0 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +GR++ G+LGLG + P+ VKAL P V V+CG T+V TE G+
Sbjct: 49 KLYMFGRNDW-GQLGLG------SKSAVCKPTCVKALKPEKVKHVACGRNHTLVSTEGGK 101
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD L+ + Q++ G S ALT+DGK+F WG
Sbjct: 102 VYAVGGNNEGQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAALTEDGKLFMWGEN 161
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G + N P E + + I+CG SA VT +G+LY +G + +LG+P
Sbjct: 162 SEGQIGLNNVCNVYFPH--EVTVGKPIAWISCGYYHSAFVTMEGELYTFGEPEFGKLGLP 219
Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
++CG T V+T +L+ +G N +LG G + KP + L ++ +A G H+
Sbjct: 34 LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKPTCVKALKPEKVKHVACGRNHT 93
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKG 162
L T+ GKV++ G GQLG T+++ +IE + ++ G +TSAA+TE G
Sbjct: 94 LVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAALTEDG 153
Query: 163 KLYMWGNAKDSQLGV 177
KL+MWG + Q+G+
Sbjct: 154 KLFMWGENSEGQIGL 168
>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
Length = 456
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 10/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV--KALPVPVAAVSCGGFFTMVLTEEGQ 59
LYTWG E G+LG G ++ G P KV + ++ ++CG +V TE G
Sbjct: 167 LYTWGWGE-HGQLGQGS---LEDSYG---PKKVIFDDANLAISQLACGDRHCLVRTESGD 219
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG+N +LG G + P LL +L + + +A G HS A+T+ G +F+WG G
Sbjct: 220 VYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCG 279
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ GH + +P ++E+L F+ + CG + + A+++ +Y++GN QLG
Sbjct: 280 AEGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLG 337
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 13/178 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
LYTWGR + RLG RG + P +K + V+CGG T+VL E+G L
Sbjct: 12 LYTWGRAKNY-RLGR---RGTRDDS--CQPELIKVFENCAIQQVACGGGHTLVLLEDGCL 65
Query: 61 WNWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++G N +LG G +V + + +L + ++I +A G YHS AL +G VF+WG G
Sbjct: 66 HSFGYNQYGQLGNGTKVDSPLDASRDISSLSN-KLIAVACGRYHSAALDVNGTVFTWGGG 124
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LGH+ Q + +P I L I CG +AA+T+ G LY WG + QLG
Sbjct: 125 KNGRLGHNDEQTRTIPCRITHLPR--AHKIFCGYHITAAITDDG-LYTWGWGEHGQLG 179
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 19 GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG 78
G G L + +L + AV+CG + + L G ++ WG N LG D
Sbjct: 77 GNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDEQT 136
Query: 79 GWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVP-MVI 137
P + +L R +I G + + A+TDDG +++WG+G HGQLG ++ P VI
Sbjct: 137 RTIPCRITHLP--RAHKIFCGYHITAAITDDG-LYTWGWGEHGQLGQGSLEDSYGPKKVI 193
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPV 188
A+ ++ +ACG TE G +Y WG+ + QLG+ + PV
Sbjct: 194 FDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPV 244
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
L+TWG EG+ G G + +P V++L V + V CG FT+ L+++ +
Sbjct: 273 LFTWGCG-AEGQCGHG------DYNDCDMPFLVESLVGVFILKVFCGHNFTVALSKDNDI 325
Query: 61 WNWGANSNYELGRGDRVGGWKPKLL----PNLVDV 91
+ +G NS +LG G + P+ L P +D+
Sbjct: 326 YVFGNNSYGQLGDGSKSSCCTPRKLFFSIPGTIDI 360
>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
Length = 1152
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 105/178 (58%), Gaps = 11/178 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL + +P +V + PV+ +SCG + + +T +G+L+
Sbjct: 161 LFMWG-DNSEGQIGL------KNVSNVCVPQQV-TIGKPVSWISCGYYHSAFVTTDGELY 212
Query: 62 NWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+G N +LG +++ G + L + + ++IQ+A GG H++ LT++ V+++G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENA-VYTFGLGQF 271
Query: 121 GQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P VIE + D+ +++I+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 272 GQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G
Sbjct: 55 KLYMFGSNNW-GQLGLGS------KSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGN 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD ++ + +I Q++ G S ALT+DG++F WG
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + V+ I+CG SA VT G+LY++G ++ +LG+P
Sbjct: 168 SEGQIGLKNVSNVCVPQQV--TIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLP 225
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 2/146 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VPV +SCG + V+T +L+ +G+N+ +LG G + KP + L ++ A
Sbjct: 36 VPVH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAAC 94
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAA 157
G H+L T+ G V++ G GQLG T+ + VI E + ++ G +TSAA
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 158 VTEKGKLYMWGNAKDSQLGVPGLPVV 183
+TE G+L+MWG+ + Q+G+ + V
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNV 180
>gi|18076889|emb|CAC86115.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 1001
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 103/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG D EG++GL + + IP +V + P++ +SCG + + +T +G+L
Sbjct: 160 KLFMWG-DNSEGQIGL------EDKSNVCIPHEV-TVGKPISWISCGYYHSAFVTMDGEL 211
Query: 61 WNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G N +LG + P+ + + + R+IQ+A GG H++ LT+ V+++G G
Sbjct: 212 YTFGEPENGKLGLPSELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK-VVYAFGLG 269
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P +IE + D+ + HI+CG + +A +TE G LY +G+ + +LG+
Sbjct: 270 QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGL 329
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG + P+ +KAL P V +CG T+V T+ G
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGG 107
Query: 60 LWNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ G N+ +LG GD + + D I Q++ G S ALT+DGK+F WG
Sbjct: 108 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT-IKQLSAGANTSAALTEDGKLFMWGD 166
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G N +P E + ++ I+CG SA VT G+LY +G ++ +LG+
Sbjct: 167 NSEGQIGLEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 224
Query: 178 P 178
P
Sbjct: 225 P 225
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 29 SIPSKV---KALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+IPSK +P+ +SCG T ++T +L+ +G+N+ +LG G + KP +
Sbjct: 25 NIPSKFWFKNDIPI---CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCI 81
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADE 143
L ++ A G H+L TD G V++ G GQLG T ++ +V AD
Sbjct: 82 KALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT 141
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++ G +TSAA+TE GKL+MWG+ + Q+G+
Sbjct: 142 -IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL 174
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E G+++ G N+ +LG +R G KP+ + L D II +A G
Sbjct: 36 VKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIIHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG + T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGL-----TTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLG 275
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT +G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLTTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L + G+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 105/178 (58%), Gaps = 11/178 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL + +P +V + PV+ +SCG + + +T +G+L+
Sbjct: 161 LFMWG-DNSEGQIGL------KNVSNVCVPQQV-TIGKPVSWISCGYYHSAFVTTDGELY 212
Query: 62 NWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+G N +LG +++ G + L + + ++IQ+A GG H++ LT++ V+++G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENA-VYTFGLGQF 271
Query: 121 GQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P VIE + D+ +++I+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 272 GQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G
Sbjct: 55 KLYMFGSNNW-GQLGLGS------KSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGN 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD ++ + +I Q++ G S ALT+DG++F WG
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + V+ I+CG SA VT G+LY++G ++ +LG+P
Sbjct: 168 SEGQIGLKNVSNVCVPQQV--TIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLP 225
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 2/146 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VPV +SCG + V+T +L+ +G+N+ +LG G + KP + L ++ A
Sbjct: 36 VPVH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAAC 94
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAA 157
G H+L T+ G V++ G GQLG T+ + VI E + ++ G +TSAA
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 158 VTEKGKLYMWGNAKDSQLGVPGLPVV 183
+TE G+L+MWG+ + Q+G+ + V
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNV 180
>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
Length = 1413
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 62/179 (34%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LY G D EG++GLG E+ L+ P +V ++ V VSCG + + +T +G L+
Sbjct: 162 LYMRG-DNSEGQIGLG-----KESNALT-PQEV-SVGKRVFWVSCGYYHSAFVTVDGALY 213
Query: 62 NWGANSNYELG-RGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G + +LG +++ K P+ + ++ D R++Q+A GG H++ALT++ +V+S+G G
Sbjct: 214 TFGEKDSGKLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVALTEN-EVYSFGLGQ 271
Query: 120 HGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH +F ++P V+E V H ACG + +A +T+ G LY +G+ + +LG+
Sbjct: 272 FGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGL 330
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
+SCG T ++TE G+L+ +G+N+ +LG G + KP + L R+ A G H+
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKG 162
L T G +++ G GQLG ++ ++E + + +A G +TSAA+T+ G
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDG 160
Query: 163 KLYMWGNAKDSQLGV 177
+LYM G+ + Q+G+
Sbjct: 161 RLYMRGDNSEGQIGL 175
Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 11/155 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LYT+G ++ G+LGL + N +P +V +P V V+CGG T+ LTE +++
Sbjct: 212 LYTFG-EKDSGKLGLSTEKLANH----KVPQQVTDIPDRVVQVACGGGHTVALTEN-EVY 265
Query: 62 NWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++G +LG G + + P+++ + R+ A G H+ +TD+G ++++G G H
Sbjct: 266 SFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRH 325
Query: 121 GQLG---HSFTQNQKVPMVIEALADEFVTHIACGG 152
G+LG +FT NQ P + D V + CGG
Sbjct: 326 GKLGLGEENFT-NQFKPTLCPRFLDYHVHSVTCGG 359
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
G+LGLG N+ P+ VKAL V +CG T+V T G L+ G N+ +
Sbjct: 66 GQLGLGTKTTVNK------PTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQ 119
Query: 71 LGRGDRVGGWKPKLLPNLVDV-----RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH 125
LG GD + +LV+ I +A G S ALT DG+++ G GQ+G
Sbjct: 120 LGLGD----CNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGL 175
Query: 126 SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
N P E + V ++CG SA VT G LY +G +LG+
Sbjct: 176 GKESNALTPQ--EVSVGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGL 225
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 44/84 (52%)
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
++I+ G H+ +T++GK+F +G GQLG P ++AL E V ACG +
Sbjct: 39 LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRT 98
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGV 177
+ T +G LY G + QLG+
Sbjct: 99 HTLVFTSRGNLYACGGNNEGQLGL 122
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIAN 98
V +CG T ++T+ G L+ +G + +LG G+ +KP L P +D + +
Sbjct: 298 VKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTC 357
Query: 99 GGYHSLAL 106
GG H L L
Sbjct: 358 GGCHMLVL 365
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S +++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3996 DVYLWG----AGRHGQLAEAGRNVMVPATAPSFSQA-----QQVICGQNCTFVIQANGTV 4046
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4166
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4055 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4171
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4172 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4219
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4207 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL G V++WG GQ
Sbjct: 4261 FGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4320
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + + I+ G SAA T
Sbjct: 4321 LGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4152 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4204
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4205 MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4264
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4265 RLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4323
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
musculus]
Length = 1039
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG D EG++GL + + IP +V + P++ +SCG + + +T +G+L
Sbjct: 198 KLFMWG-DNSEGQIGL------EDKSNVCIPHEV-TVGKPISWISCGYYHSAFVTMDGEL 249
Query: 61 WNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G N +LG + + P+ + + + R+IQ+A GG H++ LT+ V+++G G
Sbjct: 250 YTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK-VVYAFGLG 307
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P +IE + D+ + HI+CG + +A +TE G LY +G+ + +LG+
Sbjct: 308 QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGL 367
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG + P+ +KAL P V +CG T+V T+ G
Sbjct: 93 KLYMFGSNNW-GQLGLG------SKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGG 145
Query: 60 LWNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ G N+ +LG GD + + D I Q++ G S ALT+DGK+F WG
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT-IKQLSAGANTSAALTEDGKLFMWGD 204
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G N +P E + ++ I+CG SA VT G+LY +G ++ +LG+
Sbjct: 205 NSEGQIGLEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 262
Query: 178 P 178
P
Sbjct: 263 P 263
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 29 SIPSKV---KALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+IPSK +P+ +SCG T ++T +L+ +G+N+ +LG G + KP +
Sbjct: 63 NIPSKFWFKNDIPI---CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCI 119
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADE 143
L ++ A G H+L TD G V++ G GQLG T ++ +V AD
Sbjct: 120 KALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT 179
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++ G +TSAA+TE GKL+MWG+ + Q+G+
Sbjct: 180 -IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL 212
>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 447
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 83/152 (54%), Gaps = 6/152 (3%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANS-----NYELGRGDRVGGWKPKL 84
P V+AL V VS G + ++V T++G L ++G S + LG GD+ P+
Sbjct: 100 PKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIPRP 159
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF 144
+ +L VRI+++A G +HSL L+D G VFS+G G G LGH Q VP +I +L E
Sbjct: 160 VLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREK 219
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V IA G + S V E G +Y +G + LG
Sbjct: 220 VVDIAAGSAHSLVVAESGDVYSFGLGSEGALG 251
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 11 EGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNY 69
+GRLG G R IP V +L V + V+ G ++VL+++G ++++G +
Sbjct: 143 DGRLGHGDQRTQ------MIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDG 196
Query: 70 ELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ 129
LG GD+ PKL+ +L +++ IA G HSL + + G V+S+G G G LGH T
Sbjct: 197 SLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTD 256
Query: 130 NQKVPMVIEALADEFVTHIACGGSTSAAVT------EKGKLYMWGNAKDSQLGVPGLPVV 183
VP IE +A GGS S ++ ++G++ +G QLG+ +
Sbjct: 257 MSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRM 316
Query: 184 QPCPVE 189
P +
Sbjct: 317 IASPAQ 322
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 91/159 (57%), Gaps = 17/159 (10%)
Query: 30 IPSKVKA-LPVPVAAVSCGGFFTMVLT------EEGQLWNWGANSNYELGRGDRVGGWKP 82
+P K++ + P V+ GG ++VL+ +EG++ ++G NS +LG G
Sbjct: 260 VPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLG-----HFS 314
Query: 83 KLLPNLVDVRI----IQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVI 137
+++ + V++ ++I G +HSL LT+DG+V+S+G HGQLGH + ++ P +I
Sbjct: 315 RMIASPAQVQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLI 374
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
++L E + +A G + S ++ +G ++ +G K+ +LG
Sbjct: 375 QSLERERIVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLG 413
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG-----HGQLGHS 126
G GD V +PK + L R+ ++ G YHSL T DG + S+GYG G+LGH
Sbjct: 90 GHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHG 149
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ Q +P + +L+ + +A G S ++++G ++ +G D LG
Sbjct: 150 DQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLG 199
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
G+LGLG + + ++ P++V+ V + G ++VLT +G+++++G + +L
Sbjct: 306 GQLGLG-----HFSRMIASPAQVQVEAAAVE-IEAGAHHSLVLTNDGRVYSFGLAQHGQL 359
Query: 72 GRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
G G D +P L+ +L RI+ +A G SL L+ +G VFS+G G +G+LG N
Sbjct: 360 GHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDESN 419
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVT 159
P V+ A A V+ I+ G S S V
Sbjct: 420 ATQPTVVFA-AGHTVSAISAGYSHSLVVV 447
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 84/174 (48%), Gaps = 7/174 (4%)
Query: 16 LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD 75
LG G N + P V LP V A++ GG+ T LT G++W WG N +LG G
Sbjct: 596 LGDGTTTNR----TTPVAVSGLPSGVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGT 651
Query: 76 RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
P + L + IA G H+ ALT G+V+ WG +GQLG T N+ P
Sbjct: 652 TTNRSTPGAVSGLPS-GVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPG 710
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
+ L VT IA G + A+T G + WGN D QLG G P+ + PV+
Sbjct: 711 AVSGL-PSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLG-DGRPLYRTTPVD 762
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 74/148 (50%), Gaps = 2/148 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S P V L V ++ GG+ T LT G +W WG N++ +LG G + P + L
Sbjct: 452 STPVAVSGLASGVETIAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGL 511
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ IA G YH+ ALT G V+ WGY GQLG T ++ P+ + L VT I
Sbjct: 512 PS-GVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSG-VTVI 569
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A G + A+T G ++ WG D QLG
Sbjct: 570 AAGRFHTCALTSSGGVWCWGANFDGQLG 597
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 74/148 (50%), Gaps = 2/148 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S P V L V ++ G F T LT G +W WGAN + +LG G P + L
Sbjct: 554 STPVAVSGLTSGVTVIAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGL 613
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ IA GG+H+ ALT G+V+ WG +GQLG T N+ P + L VT I
Sbjct: 614 PS-GVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGL-PSGVTAI 671
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A G + A+T G+++ WG+ QLG
Sbjct: 672 AAGWEHTCALTSSGEVWCWGDNYYGQLG 699
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 81/176 (46%), Gaps = 9/176 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++ WG + G G+LG G S P+ V LP V ++ G + T L G +
Sbjct: 329 EVWCWGGN-GFGQLGDG------TTTARSTPAAVSGLPSGVETIAAGDYHTCALMSSGGV 381
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG N++ +LG G P + L + IA GG H+ AL G V+ WG
Sbjct: 382 WCWGRNNSGQLGDGTTTARSTPAAVSGLPS-GVTAIAAGGLHTCALMSSGGVWCWGLNNS 440
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG + P+ + LA T IA GG + A+T G ++ WG QLG
Sbjct: 441 GQLGDGSDTDSSTPVAVSGLASGVET-IAAGGWHTCALTSSGGVWCWGRNNSGQLG 495
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 74/148 (50%), Gaps = 2/148 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S P V LP V A++ G + T LT G + WGAN + +LG G G P + L
Sbjct: 94 STPGAVSGLPSGVTAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGL 153
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ IA GG H+ AL G V WG +GQLG T N++ P+ + L VT I
Sbjct: 154 PS-GVTAIAAGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGL-PSGVTAI 211
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A GG + A+T G+++ WG QLG
Sbjct: 212 AAGGLHTCALTGSGEVWCWGYNYYGQLG 239
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 80/176 (45%), Gaps = 8/176 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++ WG + G+LG G S P+ V LP + A++ GG T L G +
Sbjct: 226 EVWCWGYNY-YGQLGDG-----TTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSSGGV 279
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG N + +LG G P + L + IA G YH+ ALT G+V+ WG G
Sbjct: 280 WCWGRNDSGQLGDGSDTDSSTPVAVSGLPS-GVTAIAAGDYHTCALTGSGEVWCWGGNGF 338
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG T + P + L T IA G + A+ G ++ WG QLG
Sbjct: 339 GQLGDGTTTARSTPAAVSGLPSGVET-IAAGDYHTCALMSSGGVWCWGRNNSGQLG 393
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 27 GLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP 86
G S P V LP V A++ GG T L G + WG N +LG G P +
Sbjct: 143 GRSTPGAVSGLPSGVTAIAAGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVS 202
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFV 145
L + IA GG H+ ALT G+V+ WGY +GQLG + T ++ P + L
Sbjct: 203 GLPS-GVTAIAAGGLHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSGM- 260
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
T IA GG + A+ G ++ WG QLG
Sbjct: 261 TAIAAGGLHTCALMSSGGVWCWGRNDSGQLG 291
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P V LP V A++ GG T LT G++W WG N +LG G +
Sbjct: 197 TPVAVSGLPSGVTAIAAGGLHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGL 256
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
+ IA GG H+ AL G V+ WG GQLG + P+ + L VT IA
Sbjct: 257 PSGMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGL-PSGVTAIA 315
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + A+T G+++ WG QLG
Sbjct: 316 AGDYHTCALTGSGEVWCWGGNGFGQLG 342
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V A++ GG T LT G + WG N +LG G P + L + IA G
Sbjct: 55 VTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPS-GVTAIAAGN 113
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
YH+ ALT G V WG GQLG+ T + P + L VT IA GG + A+
Sbjct: 114 YHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGL-PSGVTAIAAGGDHTCALMS 172
Query: 161 KGKLYMWGNAKDSQLG 176
G + WG+ QLG
Sbjct: 173 SGGVMCWGDNYYGQLG 188
>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
Length = 1106
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 89/175 (50%), Gaps = 11/175 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+TWG D +GRLG G + +P+ V L P V+CG T+ L+ G +
Sbjct: 503 KLFTWG-DGDKGRLGHG------DKESKLVPTCVVTLVEPNCQVACGHSMTVALSRSGHV 555
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ G+ +LG G ++ L + +IA G YH LT +VF+WG G +
Sbjct: 556 YTMGSCVYGQLGNTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGAN 615
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G+LGH T ++ P ++EAL D+ V IACG + +AA+ L+ W + D +
Sbjct: 616 GRLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSM 666
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 22/191 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
+LYTWG +G GL G G N+ +P +V P + V+++SCG + T V+T
Sbjct: 384 DLYTWG--DGTYNYGL-LGHG-NQVSHW-VPKRVNG-PLEGIHVSSISCGPWHTAVVTSS 437
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G + LG GDR P+ + +L +R +Q A G +H+ A+ +
Sbjct: 438 GQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSS 497
Query: 109 ---DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
GK+F+WG G G+LGH +++ VP + L E +ACG S + A++ G +Y
Sbjct: 498 NCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLV-EPNCQVACGHSMTVALSRSGHVY 556
Query: 166 MWGNAKDSQLG 176
G+ QLG
Sbjct: 557 TMGSCVYGQLG 567
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A+ + V ++CGG ++T++G++++WG S LG G PKL+ +L + I
Sbjct: 309 AVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLSNTNIEL 368
Query: 96 IANGGYHSLALTDDGKVFSWGYG--GHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGG 152
+A G YH+ A+T G +++WG G +G LGH + VP + L V+ I+CG
Sbjct: 369 VACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGP 428
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+A VT G+L+ +G+ LG
Sbjct: 429 WHTAVVTSSGQLFTFGDGTFGALG 452
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 23/190 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + +S+P ++++L + +CG + T + E
Sbjct: 439 QLFTFG-DGTFGALGHG------DRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMV 491
Query: 57 ---------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+L+ WG LG GD+ P + LV+ Q+A G ++AL+
Sbjct: 492 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVEPNC-QVACGHSMTVALS 550
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYM 166
G V++ G +GQLG++ + K+P+ +E L+ FV IACG A +T + +++
Sbjct: 551 RSGHVYTMGSCVYGQLGNT-QADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSRTEVFT 609
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 610 WGKGANGRLG 619
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L + V + + IA GG H+ +T G+VFSWG G+LGH + P +IE+L+
Sbjct: 303 PKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLS 362
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ + +ACG + AVT G LY WG+
Sbjct: 363 NTNIELVACGEYHTCAVTLSGDLYTWGD 390
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 110 GKVFSWGYGGHG--------QLGHSF--TQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
G VF WG G Q+G +F + +P +E+ V +IACGG +A VT
Sbjct: 269 GDVFIWGEGMGDGVLGGGVHQVGSNFGVKMDSLLPKALESAVVLDVQNIACGGKHAALVT 328
Query: 160 EKGKLYMWGNAKDSQLG 176
++G+++ WG +LG
Sbjct: 329 KQGEVFSWGEESGGRLG 345
>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
Length = 514
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKV-KALPVPVAAVSC--GGFFTMVLTEEGQLWNWGANSN 68
G LGLG +++P ++ + LPV V V+ GG M LT EG++++WG
Sbjct: 187 GCLGLG------NCDDVNVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYSWGCGDR 240
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+ +G P L+ L + +IA G HS+A+ DGK+FSWG G +G LGH
Sbjct: 241 GQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNN 300
Query: 129 QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
Q +P I +L + + +ACG + AV ++ WG + +LG
Sbjct: 301 LAQLLPKKIMSLNGKHIMAVACGECYTIAVA-GDDVWSWGLGGNGELG 347
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 103/179 (57%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y+WG + G+LG G N G L P+ + L V ++CG ++ + +G+
Sbjct: 231 KVYSWGCGD-RGQLGHG-----NTLGYLD-PTLIDELKSKEVTKIACGAMHSIAVLSDGK 283
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG SN LG G+ + PK + +L I+ +A G +++A+ D V+SWG GG
Sbjct: 284 IFSWGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGD-DVWSWGLGG 342
Query: 120 HGQLGHSFTQ-NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+G+LG+ + +P IEAL + +T++ACG +TS AV+ GK++ WG+ +LG+
Sbjct: 343 NGELGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGL 401
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 8/138 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG G G LG G E +P+K++AL + V+CG + ++ G+
Sbjct: 334 DVWSWGLG-GNGELGYGV-----EMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGK 387
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W WG+ + LG G+ KP+ + +L +I ++ +H+LA+ ++G+V+ WG
Sbjct: 388 VWAWGSGDRFRLGLGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQ 447
Query: 119 GHGQLGHSFTQNQKVPMV 136
G +G+ Q+ M+
Sbjct: 448 EIGPVGNDEDAKQQQCML 465
>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
tropicalis]
gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
Length = 729
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 59/181 (32%), Positives = 106/181 (58%), Gaps = 15/181 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGL-SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+L+ WG D EG+LGL E G + P KV P+A +SCG + + +T++G+
Sbjct: 162 KLFMWG-DNSEGQLGL-------EKGTIYCTPQKVDT-GKPIAWISCGYYHSAFVTQDGE 212
Query: 60 LWNWGANSNYELG-RGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
L+ +G N +LG D++ K P+ + L ++ ++ GG H++A+T+ +V+++G
Sbjct: 213 LYTFGEPENGKLGLPPDKIKKHKKPQRVLGLSG-KVTMVSCGGEHTIAVTEK-EVYTFGL 270
Query: 118 GGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G GQLGH +F +P ++AL + + ++ CG + +A +TEKG LY +G+ + +LG
Sbjct: 271 GQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENHTAIITEKGLLYTFGDGRHGKLG 330
Query: 177 V 177
+
Sbjct: 331 L 331
Score = 84.0 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LG+ G +S P+ VKAL V +CG T+V TE+G+
Sbjct: 57 KLYVFGSNNW-GQLGVEAG------SAISKPTCVKALKSEKVVLAACGRHHTLVYTEQGK 109
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L++ G NS +LG GD G + + +I Q++ G S ALT DGK+F WG
Sbjct: 110 LYSSGGNSEGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTVDGKLFMWGDN 169
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLG P ++ + + I+CG SA VT+ G+LY +G ++ +LG+P
Sbjct: 170 SEGQLGLEKGTIYCTPQKVD--TGKPIAWISCGYYHSAFVTQDGELYTFGEPENGKLGLP 227
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+IPSK A +SCG T+++T G+L+ +G+N+ +LG KP + L
Sbjct: 27 NIPSKFWLKNDKPARISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKAL 86
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTH 147
+++ A G +H+L T+ GK++S G GQLG T + I ++ +
Sbjct: 87 KSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFTAQYKIKQ 146
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
++ G + SAA+T GKL+MWG+ + QLG+
Sbjct: 147 LSAGSNMSAALTVDGKLFMWGDNSEGQLGL 176
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYT+G E G+LGL P + P +V L V VSCGG T+ +TE+ ++
Sbjct: 212 ELYTFGEPE-NGKLGLPPDKIKKHKK----PQRVLGLSGKVTMVSCGGEHTIAVTEK-EV 265
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G +LG G + PK + L +I + G H+ +T+ G ++++G G
Sbjct: 266 YTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENHTAIITEKGLLYTFGDGR 325
Query: 120 HGQLG---HSFTQNQKVPMVIEALADEFVTHIACGG 152
HG+LG +FT NQ VP++ V +ACGG
Sbjct: 326 HGKLGLGEENFT-NQFVPILCSNFLKFTVQSVACGG 360
Score = 37.4 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEG 58
E+YT+G G+ G LG G E IP V AL + V+CG T ++TE+G
Sbjct: 264 EVYTFGL----GQFGQLGHGTFIFET---HIPKAVDALTKKKIRYVTCGENHTAIITEKG 316
Query: 59 QLWNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
L+ +G + +LG G+ + P L N + + +A GG H L
Sbjct: 317 LLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLVF 366
>gi|148922863|ref|NP_001092233.1| uncharacterized protein LOC100073325 [Danio rerio]
gi|146218416|gb|AAI39898.1| Zgc:163136 protein [Danio rerio]
Length = 994
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 17/194 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
L+ WG + G+LGL E G P +++L +PVA +S GG + VL+ G +
Sbjct: 137 LFVWGEN-ALGQLGLR-----KEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVV 190
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG+NS +LG GD + P ++ +L + + I+ GG H+ L+ G VF++G GG
Sbjct: 191 FGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGF 250
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG-KLYMWGNAKDSQLG--- 176
GQLGH+ +++ P ++ L V+ + CG + + ++Y +G QLG
Sbjct: 251 GQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFEDSSNRIYSFGCGMQGQLGNGE 310
Query: 177 -----VPGLPVVQP 185
VP LPV+ P
Sbjct: 311 QVKQSVP-LPVLLP 323
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNLVDVRIIQIANG 99
V ++CG +M L+ +G L+ WG N+ +LG R ++ G P+ L +L ++ + QI+ G
Sbjct: 118 VIQIACGDQHSMALSNDGLLFVWGENALGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAG 177
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
G HS L+ G VF WG GQLG T ++ +P ++++L+ + I+CGG +A ++
Sbjct: 178 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLS 237
Query: 160 EKGKLYMWGNAKDSQLGVPGL 180
+ G ++ +G+ QLG L
Sbjct: 238 KGGTVFTFGSGGFGQLGHNSL 258
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN-QKVPMVIEALADE 143
L L + ++IQIA G HS+AL++DG +F WG GQLG Q + P +++L +
Sbjct: 110 LKGLDNRQVIQIACGDQHSMALSNDGLLFVWGENALGQLGLRKEQAGTQSPQHLQSLCEI 169
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V I+ GG+ S ++ G ++ WG+ QLG+
Sbjct: 170 PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGL 203
>gi|225451821|ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|298204453|emb|CBI16933.3| unnamed protein product [Vitis vinifera]
Length = 478
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 88/179 (49%), Gaps = 26/179 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
L+ WG+++G P+ G P+ + + VSCG T+ L+EEG +
Sbjct: 141 RLWVWGQNQGSNY--------PHLFWGAFTPNTI------IRQVSCGAVHTVALSEEGLV 186
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVD---------VRIIQIANGGYHSLALTDDGK 111
WG N +LGRG G + + N V+I Q++ G YH+ A++++G+
Sbjct: 187 QAWGYNEYGQLGRGITCEGLQGARVINAYSKFFNEAPELVKITQVSCGEYHTAAISENGE 246
Query: 112 VFSWGYGGHGQLGHSFTQ---NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
V++WG G GQLGH Q + VP + AL IACGG + A+T KG LY W
Sbjct: 247 VYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGISTKDIACGGVHTCALTSKGALYAW 305
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 60 LWNWGANSNYELGR-GDRVGGWKPKLLPNLV-------DVRIIQIANGGYHSLALTDDGK 111
++ WG N + GR G + PK LP + + R + IA G H+ A+ DG
Sbjct: 21 IYVWGYNQRGQTGRNGKELQLRIPKQLPPELFGCPAGANSRWLSIACGREHTAAVASDGS 80
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE---------KG 162
+F+WG GQLG +K P ++ L EFV I+CG +AA+ E
Sbjct: 81 LFTWGANDFGQLGDGTEDGRKHPKKVKQLQTEFVKSISCGAHCTAAIAEPREKNGIVSTS 140
Query: 163 KLYMWGNAKDS 173
+L++WG + S
Sbjct: 141 RLWVWGQNQGS 151
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 62/196 (31%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY- 101
+++CG T + +G L+ WGAN +LG G G PK + L + I+ G +
Sbjct: 64 SIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHPKKVKQLQTEFVKSISCGAHC 123
Query: 102 ----------------------------------------------------HSLALTDD 109
H++AL+++
Sbjct: 124 TAAIAEPREKNGIVSTSRLWVWGQNQGSNYPHLFWGAFTPNTIIRQVSCGAVHTVALSEE 183
Query: 110 GKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEF--------VTHIACGGSTSAAVTE 160
G V +WGY +GQLG T + + VI A + F +T ++CG +AA++E
Sbjct: 184 GLVQAWGYNEYGQLGRGITCEGLQGARVINAYSKFFNEAPELVKITQVSCGEYHTAAISE 243
Query: 161 KGKLYMWGNAKDSQLG 176
G++Y WG QLG
Sbjct: 244 NGEVYTWGLGNMGQLG 259
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
E+YTWG G+LG G E +P +V AL + ++CGG T LT +G
Sbjct: 246 EVYTWGLGN-MGQLGHCSLQYGDKEL----VPRRVVALDGISTKDIACGGVHTCALTSKG 300
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKL---------LPNLVDVRIIQ-IANGGYHSLALTD 108
L+ WG +LG G + G + L +P LV +Q IA G H+L
Sbjct: 301 ALYAWGGGQAGQLGLGPQSGLFSCNLNESDMLLRNIPVLVVPTGVQLIACGHSHTLISMK 360
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
DG++ WGY +GQ + + P I+ E V +A GG SA +T+ L
Sbjct: 361 DGRICGWGYNSYGQAANEKSTYAWYPSPIDWCVGE-VRQLAAGGGHSAVLTDACSL 415
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 19/146 (13%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK---PKLLPNLVDVRIIQ 95
V + VSCG + T ++E G+++ WG + +LG G K P+ + L +
Sbjct: 226 VKITQVSCGEYHTAAISENGEVYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGISTKD 285
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHG-------------QLGHSFTQNQKVPMVIEALAD 142
IA GG H+ ALT G +++WG G G L S + +P+++
Sbjct: 286 IACGGVHTCALTSKGALYAWGGGQAGQLGLGPQSGLFSCNLNESDMLLRNIPVLVVPTG- 344
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWG 168
V IACG S + + G++ WG
Sbjct: 345 --VQLIACGHSHTLISMKDGRICGWG 368
>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4647
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG N +P+ VK + V V+CG T+ + ++G+
Sbjct: 529 ELYTWG--EGDFGRLGHSDSHSRN------VPTLVKDIS-GVGQVACGSSHTIAVAQDGR 579
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W++G N +LG GD ++PK++ L I ++ G SLALT G+VF+WG G
Sbjct: 580 IVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCG 639
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV- 177
G S T + + P +IE L+ + I+CG S A++ + +++ WGN Q G
Sbjct: 640 SCLGCGSSETTSLR-PRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQG 698
Query: 178 -PGLPVVQP 185
PV +P
Sbjct: 699 HTSTPVTKP 707
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y WG GR G G + S+P+ +L V CG T ++ G +
Sbjct: 3861 EVYLWG----NGRHGQLADAGTSA----SVPTLAPSLS-QTQQVVCGQNCTFLVQANGTV 3911
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG---GYHSLALTDDGKVFSWGY 117
G S LG+G+ + P ++ L + Q+ HSLALT+ G+VFSWG
Sbjct: 3912 LAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGD 3971
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +G+LGH ++ Q+ P IE L E V +ACG SA VT GKL+ +G+ +LG
Sbjct: 3972 GDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLG 4030
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 96/171 (56%), Gaps = 14/171 (8%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP----VPVAAVSCGGFFTMVLTEEGQLWNWGANS 67
GRLGLG ++ S+P K+ P V++ T+ +T EG++++WG
Sbjct: 431 GRLGLG------DSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGD 484
Query: 68 NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY-HSLALTDDGKVFSWGYGGHGQLGHS 126
+LG G+ PK++ + +++ + GY HS A+T+DG++++WG G G+LGHS
Sbjct: 485 YGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRLGHS 544
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLG 176
+ ++ VP +++ ++ V +ACG S + AV + G++ + +G + +LG
Sbjct: 545 DSHSRNVPTLVKDISG--VGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLG 593
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 40/211 (18%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF----FTMVLTEEGQLWNWGANS 67
GRLG G + L P+ + AL V + ++ LTE G++++WG
Sbjct: 3920 GRLGQG------NSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGD 3973
Query: 68 NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF 127
+LG G+ +PK + L ++Q+A G HS +T DGK+F++G G G+LG
Sbjct: 3974 YGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQRS 4033
Query: 128 TQNQKV-----------------------------PMVIEALADEFVTHIACGGSTSAAV 158
T N+ + P +I AL F+ IA G A+
Sbjct: 4034 TSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIAVGCEHILAL 4093
Query: 159 TEKGKLYMWGNAKDSQLGV-PGLPVVQPCPV 188
+ G +Y WG ++QLG+ PV +P V
Sbjct: 4094 SNTGDVYAWGCNCEAQLGLGHSNPVKEPILV 4124
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGG 100
+ G + T ++ +G + G S LG GD PK L P ++
Sbjct: 406 IEAGQYCTFSVSADGAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSD 465
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVT 159
H+LA+T +G+VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVT
Sbjct: 466 GHTLAVTAEGEVFSWGDGDYGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVT 525
Query: 160 EKGKLYMWGNAKDSQLG 176
G+LY WG +LG
Sbjct: 526 NDGELYTWGEGDFGRLG 542
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 41/210 (19%)
Query: 1 ELYTWGRDEGEGRLGLGPG---RGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E+++WG D G+LG G R P + GL V+ ++CG + V+T +
Sbjct: 3965 EVFSWG-DGDYGKLGHGNSERQRRPKQIEGLQGEEVVQ--------LACGFKHSAVVTAD 4015
Query: 58 GQLWNWGANSNYELGR--------------------GDRVGGW---------KPKLLPNL 88
G+L+ +G+ + LG+ G R+ G +P+++P L
Sbjct: 4016 GKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPAL 4075
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
V I IA G H LAL++ G V++WG QLG + K P+++ L + + I
Sbjct: 4076 EGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEPILVTTLQGKNIRQI 4135
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+ G S+A T QLG+P
Sbjct: 4136 SAGRCHSSAWTTPALSTRASGCSGIQLGLP 4165
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 19 GRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-R 76
G G +E L P ++ L + + +SCG + L+ E +++ WG N+ + G+G
Sbjct: 643 GCGSSETTSLR-PRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHTS 701
Query: 77 VGGWKPKLLPNLVDVRIIQIANGGYHSLALT---DDGKVFSW 115
KPK + L V I QI G HSLA T D ++ +W
Sbjct: 702 TPVTKPKKVIGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 743
>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 918
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 103/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG D EG++GL + +P +V + P++ +SCG + + +T EGQL
Sbjct: 160 ELFMWG-DNSEGQIGL------ENVTNVCVPQQV-TVGKPISWISCGYYHSAFVTTEGQL 211
Query: 61 WNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G +LG ++ V P+ +P + +++Q+A GG H++ LT+ V+++G G
Sbjct: 212 YTFGEPECGKLGLPNQLLVNHRMPQPVPG-IPGKVVQVACGGGHTVVLTEKA-VYTFGLG 269
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F VP IE + D+ ++ IACG + +A +T+ G +Y +G+ + +LG+
Sbjct: 270 QFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGL 329
Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 67/194 (34%), Positives = 99/194 (51%), Gaps = 16/194 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G+
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGK 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII-QIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD L+ R I Q++ G S ALT+DG++F WG
Sbjct: 108 VYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + ++ I+CG SA VT +G+LY +G + +LG+P
Sbjct: 168 SEGQIGLENVTNVCVPQ--QVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLP 225
Query: 179 GLPVV-----QPCP 187
+V QP P
Sbjct: 226 NQLLVNHRMPQPVP 239
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+IPSK +SCG T V+T +L+ +G+N+ +LG G + KP + L
Sbjct: 25 NIPSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKAL 84
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTH 147
++ A G H+L T+ GKV++ G GQLG T+ + +I + +
Sbjct: 85 KPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQ 144
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
++ G +TSAA+TE G+L+MWG+ + Q+G+
Sbjct: 145 LSAGSNTSAALTEDGELFMWGDNSEGQIGL 174
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEA-GGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LYT+G E G+LGL PN+ +P V +P V V+CGG T+VLTE+
Sbjct: 210 QLYTFGEPEC-GKLGL-----PNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKA- 262
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ +G +LG G + PK + ++ D +I IA G H+ +TD G ++++G G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Query: 119 GHGQLGHSF--TQNQKVPMVIEALADEFVTHIACGG 152
HG+LG + NQ +P + V ++CGG
Sbjct: 323 RHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGG 358
>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
Length = 1133
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
+LYTWG +G + GL G G + + +P +V P + V+++SCG + T ++T
Sbjct: 383 DLYTWG--DGTFKFGL-LGHGNDVSHW--VPKRVDG-PLEGIHVSSISCGPWHTALVTSA 436
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G S LG GDR P+ + +L +R ++ A G +H+ A+ +
Sbjct: 437 GQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 496
Query: 109 ---DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
GK+F+WG G G+LGH ++ VP + AL + +ACG + A+T G +Y
Sbjct: 497 NCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVY 556
Query: 166 MWGNAKDSQLGVPGLPVVQPCPVE 189
G+A QLG P + P VE
Sbjct: 557 TMGSAVYGQLGNPQADGLLPVRVE 580
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 22/181 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+++TWG D +GRLG G + +P+ V AL P V+CG T+ LT G
Sbjct: 502 KIFTWG-DGDKGRLGHG------DKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGH 554
Query: 60 LWNWGANSNYELGRGDRVGGWKP-----KLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
++ G+ +LG + G P KL N V+ +I+ G YH LT +V++
Sbjct: 555 VYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVE----EISCGAYHVAVLTSRTEVYT 609
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG G +G+LGH T ++ P ++EAL D+ V + CG + +AA+ ++ W + D
Sbjct: 610 WGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAIC----IHKWVSGSDQS 665
Query: 175 L 175
+
Sbjct: 666 M 666
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A+ + V +SCGG ++T++G++++WG S LG G +PKL+ +L + I
Sbjct: 308 AVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIEL 367
Query: 96 IANGGYHSLALTDDGKVFSWGYG--GHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGG 152
+A G YH+ A+T G +++WG G G LGH + VP ++ L V+ I+CG
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGP 427
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A VT G+L+ +G D GV G
Sbjct: 428 WHTALVTSAGQLFTFG---DGSFGVLG 451
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 22/190 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + LS+P +V++L + +CG + T + E
Sbjct: 438 QLFTFG-DGSFGVLGHG------DRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 490
Query: 57 ---------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+++ WG LG GD+ + P + LV+ Q+A G ++ALT
Sbjct: 491 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALT 550
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYM 166
G V++ G +GQLG+ + +P+ +E L FV I+CG A +T + ++Y
Sbjct: 551 TSGHVYTMGSAVYGQLGNP-QADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYT 609
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 610 WGKGANGRLG 619
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L V + + I+ GG H+ +T G+++SWG G+LGH + P +I++LA
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ +ACG + AVT G LY WG+
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGD 389
>gi|295789057|ref|NP_001171422.1| X-linked retinitis pigmentosa GTPase regulator isoform 2 [Mus
musculus]
gi|26325790|dbj|BAC26649.1| unnamed protein product [Mus musculus]
Length = 972
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG D EG++GL + + IP +V + P++ +SCG + + +T +G+L
Sbjct: 198 KLFMWG-DNSEGQIGL------EDKSNVCIPHEV-TVGKPISWISCGYYHSAFVTMDGEL 249
Query: 61 WNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G N +LG + + P+ + + + R+IQ+A GG H++ LT+ V+++G G
Sbjct: 250 YTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK-VVYAFGLG 307
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P +IE + D+ + HI+CG + +A +TE G LY +G+ + +LG+
Sbjct: 308 QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGL 367
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG + P+ +KAL P V +CG T+V T+ G
Sbjct: 93 KLYMFGSNNW-GQLGLG------SKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGG 145
Query: 60 LWNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ G N+ +LG GD + + D I Q++ G S ALT+DGK+F WG
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT-IKQLSAGANTSAALTEDGKLFMWGD 204
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G N +P E + ++ I+CG SA VT G+LY +G ++ +LG+
Sbjct: 205 NSEGQIGLEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 262
Query: 178 P 178
P
Sbjct: 263 P 263
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 29 SIPSKV---KALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+IPSK +P+ +SCG T ++T +L+ +G+N+ +LG G + KP +
Sbjct: 63 NIPSKFWFKNDIPI---CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCI 119
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADE 143
L ++ A G H+L TD G V++ G GQLG T ++ +V AD
Sbjct: 120 KALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT 179
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++ G +TSAA+TE GKL+MWG+ + Q+G+
Sbjct: 180 -IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL 212
>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1055
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 8/162 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+++ WG +G G+LGLG + IP +K L +A V CG + L+++GQ
Sbjct: 103 QVFAWGAGDG-GQLGLGTTEA-----AVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQ 156
Query: 60 LWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L+ WG N++ +LG G P+ L +L + + +I GG HS AL+ G VF WG
Sbjct: 157 LFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKN 216
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
GQLG + Q++ VP I+ L + V HI+CG +AA+T+
Sbjct: 217 KAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEHTAALTK 258
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 13/192 (6%)
Query: 2 LYTWGRDEGEGRLGLG-PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+YT G + G G+LG PG P G L + VSCG +M + E+GQ+
Sbjct: 54 VYTCGSN-GCGQLGHNKPGTSPELVGALDTQR--------ITLVSCGQAHSMAVNEQGQV 104
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WGA +LG G + P+L+ L D RI Q+ G H +AL+ DG++F+WG
Sbjct: 105 FAWGAGDGGQLGLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNT 164
Query: 120 HGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLG + K+ P +++LA + I GG S A++ G ++ WG K QLG+
Sbjct: 165 SGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLN 224
Query: 179 GLP-VVQPCPVE 189
+ PC ++
Sbjct: 225 DIQDRAVPCHIK 236
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 46 CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA 105
CGG ++ L +G ++ G+N +LG G P+L+ L RI ++ G HS+A
Sbjct: 40 CGGQHSVFLLHDGSVYTCGSNGCGQLGHNK--PGTSPELVGALDTQRITLVSCGQAHSMA 97
Query: 106 LTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
+ + G+VF+WG G GQLG T+ ++P +I+ L D + + CG A+++ G+L
Sbjct: 98 VNEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQL 157
Query: 165 YMWGNAKDSQLGV 177
+ WG QLG+
Sbjct: 158 FTWGQNTSGQLGL 170
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 50/221 (22%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+TWG++ G+LGLG G P++ P +K+L +P+A ++ GG + L+ G
Sbjct: 156 QLFTWGQNTS-GQLGLGKGE-PSKL----FPQPLKSLAGIPLAKITAGGDHSFALSLSGA 209
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT------------ 107
++ WG N +LG D P + L +++ I+ G H+ ALT
Sbjct: 210 VFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEHTAALTKVRIRSASQCFR 269
Query: 108 ------------------------------DDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
DG +F++G G GQLGH T N+ +P +
Sbjct: 270 TSGGRCSNPFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLGHGSTSNELLPRRV 329
Query: 138 EALADEFVTHIACG-GSTSAAVTEKGKLYMWGNAKDSQLGV 177
L V+ I CG T A G +Y +G QLG
Sbjct: 330 LELMGTEVSQITCGRHHTLAFAPSSGVVYAFGGNSHGQLGT 370
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKV 112
L ++G L+ +G S +LG G P+ + L+ + QI G +H+LA G V
Sbjct: 298 LFQDGGLFTFGDGSWGQLGHGSTSNELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGVV 357
Query: 113 FSWGYGGHGQLGHSFTQNQKV--PMVIEALA---------DEFVTHIACGGSTS 155
+++G HGQLG +K P+ I L+ VT I CGG S
Sbjct: 358 YAFGGNSHGQLGTGELSAEKCLYPVKINLLSGNNHRTDSKKYSVTKITCGGDHS 411
>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
Length = 1100
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEEG 58
+LYTWG+ + G LG G NE +P +V L + V++++CG + T V+T G
Sbjct: 379 DLYTWGKGDF-GILGHG-----NEVSHW-VPKRVNFLMEGIHVSSIACGPYHTAVVTSAG 431
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
QL+ +G + LG GDR + P+ + +L +R ++ A G +H+ A+ +
Sbjct: 432 QLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 491
Query: 109 --DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
GK+F+WG G +LGH + + VP + AL + +ACG S + A+T G +Y
Sbjct: 492 CSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYT 551
Query: 167 WGNAKDSQLGVPGLPVVQPCPVE 189
G+ QLG P P VE
Sbjct: 552 MGSPVYGQLGNPHADGKVPTRVE 574
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 12/176 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+L+TWG D + RLG G + P +P+ V AL P V+CG T+ LT G
Sbjct: 496 KLFTWG-DGDKSRLGHG-DKEPK-----LVPTCVAALVEPNFCQVACGHSLTVALTTSGH 548
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+ +LG G ++ L + +IA G YH LT +V++WG G
Sbjct: 549 VYTMGSPVYGQLGNPHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGS 608
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+G+LGH ++ P ++E+L D+ V IACG + +AAV L+ W + D +
Sbjct: 609 NGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVC----LHKWASGMDQSM 660
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V ++CGG +++T++G+ ++WG S LG G PKL+ L I +A G
Sbjct: 309 VQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGE 368
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVT 159
YHS A+T G +++WG G G LGH + VP + L + V+ IACG +A VT
Sbjct: 369 YHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVT 428
Query: 160 EKGKLYMWGN 169
G+L+ +G+
Sbjct: 429 SAGQLFTFGD 438
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 93/194 (47%), Gaps = 30/194 (15%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + + IP +V +L + +CG + T + E
Sbjct: 432 QLFTFG-DGTFGVLGHG------DRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
Query: 57 ---------EGQLWNWGANSNYELGRGDRVGGWKPKLLPN----LVDVRIIQIANGGYHS 103
G+L+ WG LG GD+ +PKL+P LV+ Q+A G +
Sbjct: 485 GSSSSSNCSSGKLFTWGDGDKSRLGHGDK----EPKLVPTCVAALVEPNFCQVACGHSLT 540
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKG 162
+ALT G V++ G +GQLG+ + KVP +E L FV IACG A +T +
Sbjct: 541 VALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRT 599
Query: 163 KLYMWGNAKDSQLG 176
++Y WG + +LG
Sbjct: 600 EVYTWGKGSNGRLG 613
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 68 NYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH 125
NY +G ++ PK L + + + + IA GG H++ +T G+ FSWG G+LGH
Sbjct: 282 NYRVGSSLEIKMDSLLPKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGH 341
Query: 126 SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
N + P +I+AL+ + +ACG S AVT G LY WG
Sbjct: 342 GVDSNVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWG 384
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 84/156 (53%), Gaps = 5/156 (3%)
Query: 21 GPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW 80
G N ++ P V+ L V+++S G +++M L +G +W WG N +LG G
Sbjct: 208 GNNNTIDINSPIPVEGLN-KVSSISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRL 266
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
P + NL II I++G HSLAL DDG V++WG GQLG T ++ +P ++ L
Sbjct: 267 SPVQVQNLSG--IIAISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGL 324
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ + I+CG S A+ G +++WG+ QLG
Sbjct: 325 SG--IVSISCGFYYSMALKNDGTVWVWGDNTSGQLG 358
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 93/175 (53%), Gaps = 12/175 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG +E G+LG G IPS+V+ L + ++SCG +++M L +G +W
Sbjct: 296 VWAWGDNE-SGQLGDGTTNSK------YIPSQVQGLS-GIVSISCGFYYSMALKNDGTVW 347
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N++ +LG G + +P +I IA G HS+AL +DG V++WG+ G
Sbjct: 348 VWGDNTSGQLGDGTTTD--RNTAVPVSGLDGVIAIACGVNHSMALRNDGTVWTWGFNAFG 405
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG ++ + I L + + I CG S S A+ + G ++ WG+ + QLG
Sbjct: 406 QLGDGTKVSKNTAVPISGL--DGIIAITCGTSHSMALKDDGTVWAWGDNQYGQLG 458
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG D G+LG G + PS+V L + ++ CG + L +G +W
Sbjct: 446 VWAWG-DNQYGQLGNGTFISN------TTPSQVSNLS-GIKSIFCGYSTSFALKPDGTVW 497
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N ELG+G P N+ D++ I I G H LAL +DG V++WG +G
Sbjct: 498 AWGNNEYGELGKGFTTRVIYPTETLNIGDIKAISI--GSSHCLALKNDGTVWAWGDNRYG 555
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG T + +P+ + ++ +T I+ GGS S A+ G ++ WG QLG
Sbjct: 556 QLGDGTTTIKSLPVQVSGISG--ITAISAGGSHSLALKSDGTVWAWGQNNVGQLG 608
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 32 SKVKALPVP----VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN 87
SK A+P+ + A++CG +M L ++G +W WG N +LG G + P + N
Sbjct: 414 SKNTAVPISGLDGIIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSN 473
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
L ++ I G S AL DG V++WG +G+LG FT P + D +
Sbjct: 474 LSGIK--SIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPTETLNIGD--IKA 529
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
I+ G S A+ G ++ WG+ + QLG G ++ PV+
Sbjct: 530 ISIGSSHCLALKNDGTVWAWGDNRYGQLG-DGTTTIKSLPVQ 570
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 40 PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG 99
P+ VS G T+ L +G +W G N +LG + + P + L ++ I+ G
Sbjct: 176 PIIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGL--NKVSSISAG 233
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
Y+S+AL DG V++WG +GQLG T + P+ ++ L+ + I+ G S S A+
Sbjct: 234 KYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQNLSG--IIAISSGNSHSLALK 291
Query: 160 EKGKLYMWGNAKDSQLG 176
+ G ++ WG+ + QLG
Sbjct: 292 DDGTVWAWGDNESGQLG 308
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 81/208 (38%), Gaps = 61/208 (29%)
Query: 32 SKVKALPVPVA------AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+ +K+LPV V+ A+S GG ++ L +G +W WG N+ +LG G + P +
Sbjct: 562 TTIKSLPVQVSGISGITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQV 621
Query: 86 PNLVDVR--------------------------------------------IIQIANGGY 101
L + II I G Y
Sbjct: 622 SELSGITVISNCIYRSFALKNDGTVWVWGSDSYNLPLEKMTMPIQISGLSGIIAIECGTY 681
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
H+LAL +DG V++WG GQ G T +P+ + L+ V IA GG+ S A+
Sbjct: 682 HNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVSGLSG--VKAIAVGGNRSIALKSD 739
Query: 162 GKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
G ++ WG L V P VE
Sbjct: 740 GTVWQWGRI---------LVSVSPSTVE 758
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIAN 98
+ A+S G + L +G +W WG N +LG G K LP V I I+
Sbjct: 527 IKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTT----IKSLPVQVSGISGITAISA 582
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
GG HSLAL DG V++WG GQLG +++ P+ + L+ +T I+ S A+
Sbjct: 583 GGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSG--ITVISNCIYRSFAL 640
Query: 159 TEKGKLYMWGN 169
G +++WG+
Sbjct: 641 KNDGTVWVWGS 651
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 31/182 (17%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG++ G+ G G N IP +V L V A++ GG ++ L +G +W
Sbjct: 692 VWAWGKNN-FGQFGDGTTTTTN------IPVQVSGLS-GVKAIAVGGNRSIALKSDGTVW 743
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVR-------IIQIANGGYHSLALTDDGKVFS 114
WG + P + R I+ I+N ++AL +DGKVF+
Sbjct: 744 QWGR----------ILVSVSPSTVETWTTARQVDGLSEIVSISN----NVALKNDGKVFT 789
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG +GQLG T + + L E V +A +TS + G + WG Q
Sbjct: 790 WGANDYGQLGDGTTTARVTVAPVSGL--EGVAGVASSDTTSMVLMNDGTIRAWGKNNFGQ 847
Query: 175 LG 176
LG
Sbjct: 848 LG 849
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
II+++ G H+LAL DG V++ G +GQLG++ T + P+ +E L V+ I+ G
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLNK--VSSISAGK 234
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
S A+ G ++ WG QLG G + PV+
Sbjct: 235 YYSMALKSDGTVWTWGENDYGQLG-DGTTATRLSPVQ 270
>gi|56753337|gb|AAW24872.1| SJCHGC03307 protein [Schistosoma japonicum]
Length = 277
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 7/149 (4%)
Query: 33 KVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNLVD 90
KV AL + +V+CG + +T G L+ WG NSN +LGR GD KL+ L D
Sbjct: 84 KVAALEQYRIISVACGAYHNAAVTYSGLLFTWGCNSNGQLGREGDDTA---VKLVRALSD 140
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM--VIEALADEFVTHI 148
R++Q++ G H+L LTD +VF++G GQLG F+ Q VP+ I L+ + I
Sbjct: 141 HRVVQVSLGVEHTLVLTDTARVFAFGSNLKGQLGLGFSSEQPVPIPQQILCLSGLPIRRI 200
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GG S +T G LY WG+ K QLG+
Sbjct: 201 TAGGWHSFVLTVSGSLYAWGSNKYGQLGL 229
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+L+ WG E +G+L + + P + +P +SCG T+ LT +G+
Sbjct: 7 DLFVWGSCE-DGQLT----SDNTDTFNVLTPKALNVQNLPEFVQISCGYTHTVFLTIDGE 61
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++ G N +LG R G + + L RII +A G YH+ A+T G +F+WG
Sbjct: 62 VYSCGCNEFQQLGH--RQSGGRLGKVAALEQYRIISVACGAYHNAAVTYSGLLFTWGCNS 119
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLG + ++ AL+D V ++ G + +T+ +++ +G+ QLG+ G
Sbjct: 120 NGQLGRE--GDDTAVKLVRALSDHRVVQVSLGVEHTLVLTDTARVFAFGSNLKGQLGL-G 176
Query: 180 LPVVQPCPV 188
QP P+
Sbjct: 177 FSSEQPVPI 185
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 16/131 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
L+TWG + G+LG G + A L V+AL V VS G T+VLT+ ++
Sbjct: 112 LFTWGCNS-NGQLG---REGDDTAVKL-----VRALSDHRVVQVSLGVEHTLVLTDTARV 162
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPN----LVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +G+N +LG G +P +P L + I +I GG+HS LT G +++WG
Sbjct: 163 FAFGSNLKGQLGLG--FSSEQPVPIPQQILCLSGLPIRRITAGGWHSFVLTVSGSLYAWG 220
Query: 117 YGGHGQLGHSF 127
+GQLG S+
Sbjct: 221 SNKYGQLGLSY 231
>gi|297841169|ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
lyrata]
gi|297334307|gb|EFH64725.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
lyrata]
Length = 1005
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 25/193 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL---PVPVAAVSCGGFFTMVLTEE 57
ELY WG D G ++G + K+ + + + +V+CG + T ++T
Sbjct: 363 ELYLWGIDGGT----------IEQSGSQFLTRKISDVLGGSLSIFSVACGAWHTAMVTSS 412
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-------- 109
GQL+ +G+ + LG G KPK + +L +++I ++ G +H+ A+ +
Sbjct: 413 GQLFTYGSRTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETAIDRKFYN 472
Query: 110 ----GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
GK+F+WG G G+LGH+ + + VP + L D ++CG + + A++ G +Y
Sbjct: 473 AKSCGKLFTWGDGDKGRLGHADNKRKLVPTCVTELIDHDFIKVSCGWTLTVALSVSGTVY 532
Query: 166 MWGNAKDSQLGVP 178
G++ QLG P
Sbjct: 533 TMGSSIHGQLGCP 545
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 15/172 (8%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEE------------GQLWNWGA 65
G G E+ ++ P +V++L + V +VSCG + T + E G+L+ WG
Sbjct: 427 GHGSLES--VTKPKEVESLRRMKVISVSCGPWHTAAIVETAIDRKFYNAKSCGKLFTWGD 484
Query: 66 NSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH 125
LG D P + L+D I+++ G ++AL+ G V++ G HGQLG
Sbjct: 485 GDKGRLGHADNKRKLVPTCVTELIDHDFIKVSCGWTLTVALSVSGTVYTMGSSIHGQLGC 544
Query: 126 SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+++ + +V+ L +FV IA G A +T G +Y WG + QLG+
Sbjct: 545 PRAKDKSINVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGTNGQLGL 596
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 22/166 (13%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVA--------AVSCGGFFTM 52
+L+TWG D +GRLG +K K +P V VSCG T+
Sbjct: 478 KLFTWG-DGDKGRLG-------------HADNKRKLVPTCVTELIDHDFIKVSCGWTLTV 523
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
L+ G ++ G++ + +LG +L NL + IA+G +H LT G V
Sbjct: 524 ALSVSGTVYTMGSSIHGQLGCPRAKDKSINVVLGNLTRQFVKDIASGSHHVAVLTSFGNV 583
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
++WG G +GQLG +++ P+++E L D V IACG + +AA+
Sbjct: 584 YTWGKGTNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAI 629
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 54/106 (50%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WGA + G ++ PKLL + + I+ G H+ +T G+VF WG G G+
Sbjct: 263 WGAITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGK 322
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
LG + P +E+L D V +AC + AVTE G+LY+WG
Sbjct: 323 LGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWG 368
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V ++S G ++T +G+++ WG ++ +LG + PK + +L DV + +A
Sbjct: 293 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSD 352
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQ--NQKVPMVIEALADEFVTHIACGGSTSAAV 158
+ + A+T+ G+++ WG G G + S +Q +K+ V+ F +ACG +A V
Sbjct: 353 HQTCAVTESGELYLWGIDG-GTIEQSGSQFLTRKISDVLGGSLSIF--SVACGAWHTAMV 409
Query: 159 TEKGKLYMWGNAKDSQLGVPGL-PVVQPCPVE 189
T G+L+ +G+ LG L V +P VE
Sbjct: 410 TSSGQLFTYGSRTFGVLGHGSLESVTKPKEVE 441
>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
Length = 1093
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
+LYTWG +G + GL G G + + +P +V P + V+++SCG + T ++T
Sbjct: 383 DLYTWG--DGTFKFGL-LGHGNDVSHW--VPKRVDG-PLEGIHVSSISCGPWHTALVTSA 436
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G S LG GDR P+ + +L +R ++ A G +H+ A+ +
Sbjct: 437 GQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 496
Query: 109 ---DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
GK+F+WG G G+LGH ++ VP + AL + +ACG + A+T G +Y
Sbjct: 497 NCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVY 556
Query: 166 MWGNAKDSQLGVPGLPVVQPCPVE 189
G+A QLG P + P VE
Sbjct: 557 TMGSAVYGQLGNPQADGLLPVRVE 580
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 22/181 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+++TWG D +GRLG G + +P+ V AL P V+CG T+ LT G
Sbjct: 502 KIFTWG-DGDKGRLGHG------DKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGH 554
Query: 60 LWNWGANSNYELGRGDRVGGWKP-----KLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
++ G+ +LG + G P KL N V+ +I+ G YH LT +V++
Sbjct: 555 VYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVE----EISCGAYHVAVLTSRTEVYT 609
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG G +G+LGH T ++ P ++EAL D+ V + CG + +AA+ ++ W + D
Sbjct: 610 WGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAIC----IHKWVSGSDQS 665
Query: 175 L 175
+
Sbjct: 666 M 666
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A+ + V +SCGG ++T++G++++WG S LG G +PKL+ +L + I
Sbjct: 308 AVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIEL 367
Query: 96 IANGGYHSLALTDDGKVFSWGYG--GHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGG 152
+A G YH+ A+T G +++WG G G LGH + VP ++ L V+ I+CG
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGP 427
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A VT G+L+ +G D GV G
Sbjct: 428 WHTALVTSAGQLFTFG---DGSFGVLG 451
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 22/190 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + LS+P +V++L + +CG + T + E
Sbjct: 438 QLFTFG-DGSFGVLGHG------DRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 490
Query: 57 ---------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+++ WG LG GD+ + P + LV+ Q+A G ++ALT
Sbjct: 491 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALT 550
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYM 166
G V++ G +GQLG+ + +P+ +E L FV I+CG A +T + ++Y
Sbjct: 551 TSGHVYTMGSAVYGQLGNP-QADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYT 609
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 610 WGKGANGRLG 619
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L V + + I+ GG H+ +T G+++SWG G+LGH + P +I++LA
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ +ACG + AVT G LY WG+
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGD 389
>gi|260826876|ref|XP_002608391.1| hypothetical protein BRAFLDRAFT_95399 [Branchiostoma floridae]
gi|229293742|gb|EEN64401.1| hypothetical protein BRAFLDRAFT_95399 [Branchiostoma floridae]
Length = 448
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 15/182 (8%)
Query: 11 EGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
+G+LGLG +S+ ++V L PV V+CG FT+ +TE+GQL++WG+N+ +
Sbjct: 82 KGQLGLG------HREDVSVLTQVTTLTEPVDTVACGWDFTLAVTEDGQLFSWGSNAFGQ 135
Query: 71 LGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ 129
LG + G P + L VRI+ +A G H++AL D G V++WG G GQLG +
Sbjct: 136 LGVPEVKGHTSVPTPVQTLQGVRIVGVAAGLRHAVALDDTGSVWTWGAGKRGQLGR--LE 193
Query: 130 NQKVPMV------IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVV 183
+ P V ++ + + + G S A+TE +++ WG A QLG G V
Sbjct: 194 EGRCPTVSKQTGKVQLDVESSIVAVKAGSYHSLALTEDKRVWTWGRADYGQLGRFGDRTV 253
Query: 184 QP 185
P
Sbjct: 254 MP 255
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 10/166 (6%)
Query: 20 RGPNEAGGLSI--------PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
+G N G L + P +++ + V AV+ GG T ++ EG+L+ G N +L
Sbjct: 26 KGANSYGQLGVGHCDDRHSPQQLEGVNFRVKAVTGGGGHTAFISAEGRLFVCGWNQKGQL 85
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ-N 130
G G R + L + + +A G +LA+T+DG++FSWG GQLG + +
Sbjct: 86 GLGHREDVSVLTQVTTLTEP-VDTVACGWDFTLAVTEDGQLFSWGSNAFGQLGVPEVKGH 144
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
VP ++ L + +A G + A+ + G ++ WG K QLG
Sbjct: 145 TSVPTPVQTLQGVRIVGVAAGLRHAVALDDTGSVWTWGAGKRGQLG 190
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 64 GANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL 123
GANS +LG G P+ L V+ R+ + GG H+ ++ +G++F G+ GQL
Sbjct: 27 GANSYGQLGVGHCDDRHSPQQLEG-VNFRVKAVTGGGGHTAFISAEGRLFVCGWNQKGQL 85
Query: 124 GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLP-- 181
G ++ V + L E V +ACG + AVTE G+L+ WG+ QLGVP +
Sbjct: 86 GLGHREDVSVLTQVTTLT-EPVDTVACGWDFTLAVTEDGQLFSWGSNAFGQLGVPEVKGH 144
Query: 182 VVQPCPVE 189
P PV+
Sbjct: 145 TSVPTPVQ 152
>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
Length = 725
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA- 97
+ VA ++CG + +T G + WG LG GD +PKL+ L+ R I IA
Sbjct: 1 MSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIAC 60
Query: 98 -NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
+G +L +TDD V+SWG G +G+LG + K+P IE+LA V + CG S
Sbjct: 61 GSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSV 120
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
A+T+ G +Y WG +LG
Sbjct: 121 ALTKSGAVYTWGKGDFHRLG 140
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT+ G +
Sbjct: 76 VWSWG-DGDYGKLGRGG------SDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAV 128
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L +II IA G H +A +D G+V++WG
Sbjct: 129 YTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDE 188
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++ AL + + + CG + + A++
Sbjct: 189 GQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 227
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+ TWG+ GR G LG G ++ P V+AL ++CG T+ +T+
Sbjct: 21 HVLTWGK----GRYGRLGHGDSEDQLR----PKLVEALLGYRAIDIACGSGDAQTLCITD 72
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 73 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWG 132
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LGH + + P + AL + + IA G A ++ G++Y WG+ + QLG
Sbjct: 133 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 192
Query: 177 VPGLPVVQ 184
+ +Q
Sbjct: 193 DGTVTAIQ 200
>gi|355694495|gb|AER99688.1| hect domain and RLD 4 [Mustela putorius furo]
Length = 181
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 3/144 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 36 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 95
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++++Q+A G YHSLAL+ +VFSWG +GQLG + Q P +I++L
Sbjct: 96 SDIQVVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 155
Query: 148 IACGGSTSAAVTEKGKLYMWGNAK 171
+A GG+ S +T G ++ WG K
Sbjct: 156 VAAGGAHSFVLTLSGAIFGWGRNK 179
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 46 CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLA 105
CG T+ + ++G ++ G N +LG KP+ + L I+ ++ G H+LA
Sbjct: 2 CGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLA 59
Query: 106 LTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
L D G+V++WG GQLG ++ +VP I++L+D V +ACG S A+++ ++
Sbjct: 60 LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQVVQVACGYYHSLALSKASEV 119
Query: 165 YMWGNAKDSQLGV 177
+ WG K QLG+
Sbjct: 120 FSWGQNKYGQLGL 132
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y WG D +G+LGL G E + +P +K+L + V V+CG + ++ L++ +
Sbjct: 65 QVYAWGLDS-DGQLGL---LGSEEC--IRVPRNIKSLSDIQVVQVACGYYHSLALSKASE 118
Query: 60 LWNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG N +LG G D P+L+ +L+ + +Q+A GG HS LT G +F WG
Sbjct: 119 VFSWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 178
Query: 119 GHG 121
G
Sbjct: 179 KFG 181
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
H++ + DDG V++ G GQLGH +++K P + AL + + ++CG + + A+ +K
Sbjct: 6 HTVFVLDDGTVYTCGCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK 63
Query: 162 GKLYMWGNAKDSQLGVPG 179
G++Y WG D QLG+ G
Sbjct: 64 GQVYAWGLDSDGQLGLLG 81
>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 1091
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
+LYTWG +G + GL G G + + +P +V P + V+++SCG + T ++T
Sbjct: 383 DLYTWG--DGTFKFGL-LGHGNDVSHW--VPKRVDG-PLEGIHVSSISCGPWHTALVTSA 436
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G S LG GDR P+ + +L +R ++ A G +H+ A+ +
Sbjct: 437 GQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 496
Query: 109 ---DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
GK+F+WG G G+LGH ++ VP + AL + +ACG + A+T G +Y
Sbjct: 497 NCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVY 556
Query: 166 MWGNAKDSQLGVPGLPVVQPCPVE 189
G+A QLG P + P VE
Sbjct: 557 TMGSAVYGQLGNPQADGLLPVRVE 580
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 22/181 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+++TWG D +GRLG G + +P+ V AL P V+CG T+ LT G
Sbjct: 502 KIFTWG-DGDKGRLGHG------DKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGH 554
Query: 60 LWNWGANSNYELGRGDRVGGWKP-----KLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
++ G+ +LG + G P KL N V+ +I+ G YH LT +V++
Sbjct: 555 VYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVE----EISCGAYHVAVLTSRTEVYT 609
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG G +G+LGH T ++ P ++EAL D+ V + CG + +AA+ ++ W + D
Sbjct: 610 WGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAIC----IHKWVSGSDQS 665
Query: 175 L 175
+
Sbjct: 666 M 666
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A+ + V +SCGG ++T++G++++WG S LG G +PKL+ +L + I
Sbjct: 308 AVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIEL 367
Query: 96 IANGGYHSLALTDDGKVFSWGYG--GHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGG 152
+A G YH+ A+T G +++WG G G LGH + VP ++ L V+ I+CG
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGP 427
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A VT G+L+ +G D GV G
Sbjct: 428 WHTALVTSAGQLFTFG---DGSFGVLG 451
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 22/190 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + LS+P +V++L + +CG + T + E
Sbjct: 438 QLFTFG-DGSFGVLGHG------DRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 490
Query: 57 ---------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+++ WG LG GD+ + P + LV+ Q+A G ++ALT
Sbjct: 491 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALT 550
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYM 166
G V++ G +GQLG+ + +P+ +E L FV I+CG A +T + ++Y
Sbjct: 551 TSGHVYTMGSAVYGQLGNP-QADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYT 609
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 610 WGKGANGRLG 619
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L V + + I+ GG H+ +T G+++SWG G+LGH + P +I++LA
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ +ACG + AVT G LY WG+
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGD 389
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P +K L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLTTIED-----AVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 SSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +VK+L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGQN-SYGQLGLGK-ECPSQAS----PQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG NS+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L V+ IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG G KP+ + L I+ +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHD--CEGSKPEQIGALAGQHIVHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+D G++FSWG G GQLG + ++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGQNSYGQLGL 171
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLG-PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L+++GQ
Sbjct: 54 EVYTCGLN-TKGQLGHDCEGSKPEQIGALAGQH--------IVHVACGESHSVALSDQGQ 104
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L++WGA S+ +LG P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQN 164
Query: 119 GHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG +Q P +++L + +A GG+ S A++ G ++ WG QLG+
Sbjct: 165 SYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGL 224
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH ++ P I AL
Sbjct: 24 EPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
A + + H+ACG S S A++++G+L+ WG D QLG+ +
Sbjct: 82 AGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTI 121
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 24/177 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL R P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGKNSS-GQLGLSDERDRES------PCHVKLLRSQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G +H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323
Query: 120 HGQLGHSFTQNQKVPMVI---------------EALADEFVTHIACGGSTSAAVTEK 161
GQLG T N K P + +A V HI GG + + K
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHIFSGGDQTFVLCSK 380
>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
Length = 954
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 96/191 (50%), Gaps = 23/191 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVA-AVSCGGFFTMVLTEEGQ 59
E++TWG + G GRLG G +S P V++L + V +SCG F T +T G
Sbjct: 276 EVFTWGEEFG-GRLGHGTD------ADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGD 328
Query: 60 LWNWGANSNYE---LGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSW 115
L+NWG S Y LG G V W PK + L ++++ +A G +HS T GK++++
Sbjct: 329 LFNWGDGS-YNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTF 387
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE----------KGKLY 165
G G G LGH + P +EAL+ +ACG SAA+ E KLY
Sbjct: 388 GDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLY 447
Query: 166 MWGNAKDSQLG 176
WG+ ++LG
Sbjct: 448 TWGDGDKNRLG 458
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 19/201 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+LYT+G +G G+ G G E L+ P +V+AL V+CG + + + E
Sbjct: 383 KLYTFG----DGTFGV-LGHGDRET--LAYPKEVEALSGFKTIKVACGIWHSAAIVEVTN 435
Query: 57 -------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD 109
+L+ WG LG GD+ PK + L++ Q+A G ++AL
Sbjct: 436 QTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALATS 495
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G+VF+ G +GQLG+ + ++ +V + LA E V I+CG S +T + ++Y WG
Sbjct: 496 GRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGM 555
Query: 170 AKDSQLGVPGLP-VVQPCPVE 189
+ +LG L +PC VE
Sbjct: 556 GANGRLGHGDLKDRKKPCLVE 576
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 14/177 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LYTWG D + RLG G + P +P V+AL ++CG T+ L G+
Sbjct: 445 KLYTWG-DGDKNRLGHG-DKEPR-----LVPKCVQALLEYNFHQLACGHNMTVALATSGR 497
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ-IANGGYHSLALTDDGKVFSWGYG 118
++ G++SN +LG + G +P L+ + + +++ I+ G H LT +V++WG G
Sbjct: 498 VFTMGSSSNGQLG-NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMG 556
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+G+LGH +++K P ++EAL D V I+CG + + + ++ W + D +
Sbjct: 557 ANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCIC----IHKWVSGADQSV 609
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 21/173 (12%)
Query: 22 PNEAGGLSIPSKVKAL-PVP--------VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
P++ S SKV L P P V ++CG + T +G+++ WG LG
Sbjct: 230 PSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLG 289
Query: 73 RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH--GQLGH----S 126
G +PKL+ +L + I+ G +H+ A+T G +F+WG G + G LG S
Sbjct: 290 HGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVS 349
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +KV +E L V +ACG SA T GKLY +G D GV G
Sbjct: 350 YWLPKKVSGPLEGLQ---VLSVACGSWHSALTTSSGKLYTFG---DGTFGVLG 396
>gi|308802742|ref|XP_003078684.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
gi|116057137|emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
Length = 419
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 85/152 (55%), Gaps = 12/152 (7%)
Query: 37 LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL-VDVRIIQ 95
L V V V+ G T+ + +G +W +G N +LG G + G++P+ + L ++ +I+
Sbjct: 115 LDVEVVRVAAGNNHTLCVDVDGGVWAFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVD 174
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLGHS--------FTQNQKV---PMVIEALADEF 144
+A+G HSLAL++D +V+SWG G LGH F + K P ++ AL++
Sbjct: 175 VASGAEHSLALSEDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETK 234
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V IA G SA V E+G+L+ WG + +QLG
Sbjct: 235 VRSIAAGHMHSACVDERGELFTWGQGRFNQLG 266
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 25/190 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV--PVAAVSCGGFFTMVLTEEGQ 59
++ +G++EG G+LG G + G P +++ L + + V+ G ++ L+E+ +
Sbjct: 138 VWAFGKNEG-GQLGTGL-----DLDGFQ-PRRIETLALEGKIVDVASGAEHSLALSEDAR 190
Query: 60 LWNWGANSNYELGRGDRV--GGW---------KPKLLPNLVDVRIIQIANGGYHSLALTD 108
+++WG +++ LG G GW KP+LL L + ++ IA G HS + +
Sbjct: 191 VYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIAAGHMHSACVDE 250
Query: 109 DGKVFSWGYGGHGQLGHS--FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
G++F+WG G QLG + + ++ P ++ L FV + CGG + A T G +
Sbjct: 251 RGELFTWGQGRFNQLGQTSKYVDHETAPKSVDTL--RFVHQVTCGGLHTLASTSAG-VVS 307
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 308 WGANQHGELG 317
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V V + GG ++ L G ++ G N+ +LG G L +L DV ++++A
Sbjct: 66 VDVTQCAAGGAHSIFLAHGGFVFACGLNNYGQLGHGKHSAHVPEAALVDL-DVEVVRVAA 124
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE-FVTHIACGGSTSAA 157
G H+L + DG V+++G GQLG + P IE LA E + +A G S A
Sbjct: 125 GNNHTLCVDVDGGVWAFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVDVASGAEHSLA 184
Query: 158 VTEKGKLYMWGNAKDSQLG 176
++E ++Y WG + D LG
Sbjct: 185 LSEDARVYSWGTSADGVLG 203
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 15/178 (8%)
Query: 1 ELYTWGRDEGEGRLGLGP-----GRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVL 54
+Y+WG +G LG G G A ++ P ++AL V +++ G + +
Sbjct: 190 RVYSWGT-SADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIAAGHMHSACV 248
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD-VRII-QIANGGYHSLALTDDGKV 112
E G+L+ WG +LG+ + + P VD +R + Q+ GG H+LA T G V
Sbjct: 249 DERGELFTWGQGRFNQLGQTSKY--VDHETAPKSVDTLRFVHQVTCGGLHTLASTSAG-V 305
Query: 113 FSWGYGGHGQLGHSFTQNQK--VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
SWG HG+LGH + K +P I+ L+ + ++ G SA V+ GKL+ WG
Sbjct: 306 VSWGANQHGELGHGSNSDAKSAIPKPIK-LSSRGWSKLSAGWKHSAGVSNDGKLFAWG 362
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+TWG +GR G+ + P V L V V+CGG T+ T G +
Sbjct: 253 ELFTWG----QGRFNQ-LGQTSKYVDHETAPKSVDTLRF-VHQVTCGGLHTLASTSAGVV 306
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-IIQIANGGYHSLALTDDGKVFSWGYGG 119
+WGAN + ELG G P + R +++ G HS +++DGK+F+WG+GG
Sbjct: 307 -SWGANQHGELGHGSNSDAKSAIPKPIKLSSRGWSKLSAGWKHSAGVSNDGKLFAWGFGG 365
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
L DV + Q A GG HS+ L G VF+ G +GQLGH + VP D V
Sbjct: 63 LEDVDVTQCAAGGAHSIFLAHGGFVFACGLNNYGQLGHG-KHSAHVPEAALVDLDVEVVR 121
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV-PGLPVVQPCPVE 189
+A G + + V G ++ +G + QLG L QP +E
Sbjct: 122 VAAGNNHTLCVDVDGGVWAFGKNEGGQLGTGLDLDGFQPRRIE 164
>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
Length = 1126
Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 96/178 (53%), Gaps = 11/178 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+LY++G G+ GL G + IP ++ L V+CG ++ LT G +
Sbjct: 41 QLYSFGM----GKTGL---LGNEHLEDVKIPQQLN-LKQKFVQVACGATHSLALTISGII 92
Query: 61 WNWGANSNYELGRGDRVGGWKPK-LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG N +LG G++ KPK ++ N D+ I G HS ++ + ++++WG G
Sbjct: 93 FSWGKNLRGQLGHGNQNDCLKPKEVIQN--DIIAEYIDCGDQHSAFVSKNKELYTWGNGQ 150
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ +LGH T ++ +P + L D +VTH++CG + + VT +G +Y WG+ +LGV
Sbjct: 151 YYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYAWGDGMYGKLGV 208
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 90/182 (49%), Gaps = 13/182 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+++WG++ G+LG G N+ L P +V + + CG + +++ +L+
Sbjct: 92 IFSWGKNL-RGQLGHG-----NQNDCLK-PKEVIQNDIIAEYIDCGDQHSAFVSKNKELY 144
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG Y LG G PK + L D + ++ G H+L +T +G V++WG G +G
Sbjct: 145 TWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYAWGDGMYG 204
Query: 122 QLGHSF-TQNQKVPMVIEALADEF-----VTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+LG S + Q +P + + +F +A G S A++ G+++ WG++K L
Sbjct: 205 KLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTNGQIFTWGSSKSGNL 264
Query: 176 GV 177
G+
Sbjct: 265 GI 266
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 51/135 (37%), Positives = 71/135 (52%), Gaps = 7/135 (5%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
++CG T+++ E QL+++G LG P+ L NL + +Q+A G HS
Sbjct: 26 IACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQL-NLKQ-KFVQVACGATHS 83
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQ--KVPMVIEALADEFVTHIACGGSTSAAVTEK 161
LALT G +FSWG GQLGH QN K VI+ D +I CG SA V++
Sbjct: 84 LALTISGIIFSWGKNLRGQLGHG-NQNDCLKPKEVIQ--NDIIAEYIDCGDQHSAFVSKN 140
Query: 162 GKLYMWGNAKDSQLG 176
+LY WGN + +LG
Sbjct: 141 KELYTWGNGQYYRLG 155
Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 51/153 (33%), Positives = 71/153 (46%), Gaps = 28/153 (18%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG + LG G +E IP KV L V VSCG T+++T EG
Sbjct: 142 ELYTWGNGQ---YYRLGHGVTTDEL----IPKKVVVLEDYYVTHVSCGMNHTLIVTGEGF 194
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV---------RIIQIANGGYHSLALTDDG 110
++ WG +LG + K + LP V + Q+A G HSLAL+ +G
Sbjct: 195 VYAWGDGMYGKLGVSEDC---KTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTNG 251
Query: 111 KVFSWGYGGHGQLG--------HSFTQNQKVPM 135
++F+WG G LG +TQ QK+ +
Sbjct: 252 QIFTWGSSKSGNLGIGYNKDIQDYYTQPQKISI 284
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG-GWKPKLLPNLVDVR-IIQIANGGY 101
+SC + ++++GQ + WG N Y+LG G + P+ L +++ + II A
Sbjct: 433 ISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETKTIIMSACSDK 492
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT-E 160
S LTD G+V+++G G LGH VP + +IACG +++
Sbjct: 493 FSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMVNDIPQMIYIACGPQGMVSISAH 552
Query: 161 KGKLYMWGNAKDSQLGV 177
K +LY WGN QLG+
Sbjct: 553 KRQLYAWGNNIYGQLGI 569
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
L D II IA G +H+L + ++ +++S+G G G LG+ ++ K+P + L +FV
Sbjct: 18 LQDKEIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLN-LKQKFV-Q 75
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ACG + S A+T G ++ WG QLG
Sbjct: 76 VACGATHSLALTISGIIFSWGKNLRGQLG 104
>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
Length = 1010
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 96/181 (53%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+ + + P K+K L + + VSCG + ++ L+E+GQ
Sbjct: 93 RVFAWGAG-SEGQLGIEECKEK-----IFTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQ 146
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 147 VYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSN 206
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G++ + P I AL V +I+CG +A +T+ GK++ +G+ QL
Sbjct: 207 NTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQL 266
Query: 176 G 176
G
Sbjct: 267 G 267
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 97/176 (55%), Gaps = 11/176 (6%)
Query: 8 DEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGAN 66
D +G+LG G+ E GL +KAL + V VSCG ++ + +G+++ WGA
Sbjct: 47 DNTQGQLG-RRGKPREERPGL-----IKALETLLVGLVSCGKEHSLAVCHKGRVFAWGAG 100
Query: 67 SNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ--L 123
S +LG + + + PK + L ++IIQ++ G YHSLAL++DG+V+SWG GQ L
Sbjct: 101 SEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGL 160
Query: 124 GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
G F +Q P + +L + +A GG+ S A++ G + WG+ QL + G
Sbjct: 161 GKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSG 215
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 99/177 (55%), Gaps = 12/177 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG++ +G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 146 QVYSWGKN-SQGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGT 199
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+N+ +L G V +KP + L + +I I+ G H+ LT +GKVF++G
Sbjct: 200 SFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFG 259
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKD 172
GQLG++ T ++ P +E + D V+ I CG T A V G++ +G ++
Sbjct: 260 DNSCGQLGYNPTAKKRGPQQVEGI-DGLVSQIDCGSYHTLAYVYTTGEVVSFGRGRN 315
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V +CG +++L +G + + G N+ +LGR + +P L+ L + + ++ G
Sbjct: 23 VRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCGK 82
Query: 101 YHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLA+ G+VF+WG G GQLG + P I+ L + ++CG S A++
Sbjct: 83 EHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALS 142
Query: 160 EKGKLYMWGNAKDSQLGV 177
E G++Y WG QLG+
Sbjct: 143 EDGQVYSWGKNSQGQLGL 160
>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
livia]
Length = 719
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 108/184 (58%), Gaps = 21/184 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG D EG++GL + +S+P +V + PV+++SCG + + ++T +G+L
Sbjct: 155 QLFVWG-DNSEGQIGLA------DEACVSVPCQVD-VGKPVSSISCGYYHSALITGDGEL 206
Query: 61 WNWGANSNYELG------RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
+ +G N +LG + +RV P+ +P +++ ++ ++A GG H++ LT+ V++
Sbjct: 207 YTFGEPENGKLGLLPEQLKNNRV----PQPVPGIME-KVNKVACGGEHTVVLTET-DVYT 260
Query: 115 WGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
+G G +GQLGH +F VP ++ L + +I CG + +A V E G ++ +G+ +
Sbjct: 261 FGLGQYGQLGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVVAENGLMFTFGDGRHG 320
Query: 174 QLGV 177
+LG+
Sbjct: 321 KLGL 324
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
IPSK +SCG T ++T G+L+ +G+N+ +LG G + KP + L
Sbjct: 21 IPSKFWFKNDKPVLISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALK 80
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHI 148
+ G H+L T+ G V++ G GQLG T+ + +I ++ + +
Sbjct: 81 PEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTNQHKIKQL 140
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQ-PCPVE 189
A G TSAAVTE G+L++WG+ + Q+G+ V PC V+
Sbjct: 141 AAGSYTSAAVTEDGQLFVWGDNSEGQIGLADEACVSVPCQVD 182
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 29 SIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR--VGGWKPKLL 85
S+P VK L + ++CG T V+ E G ++ +G + +LG G+ + P L
Sbjct: 279 SVPKSVKHLRRHKICNITCGENHTAVVAENGLMFTFGDGRHGKLGLGEENYTNQFDPTLC 338
Query: 86 PNLVDVRIIQIANGGYHSLAL 106
N + ++ +A GG H L
Sbjct: 339 YNFLRFTVLLVACGGCHMLVF 359
>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
SB210]
Length = 1146
Score = 89.4 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 20/191 (10%)
Query: 1 ELYTWG---RDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE 56
++YTWG +D +G+LGLG + P K+K + VSCG F TM LT
Sbjct: 700 DIYTWGGGGQDYNKGQLGLG------HVKDIENPEKLKFFEGKKIVKVSCGQFHTMALTS 753
Query: 57 EGQLWNWGANSNYELGRGD--------RVGGWKPKLLPN--LVDVRIIQIANGGYHSLAL 106
E +L+ WGA ELG +V + +L L + I I GG+H+L L
Sbjct: 754 ENELFGWGAGEFGELGTSKHEYTPIRVKVNFNQYNILYENILFENSIQNIKCGGHHTLLL 813
Query: 107 TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
T++G ++S GYG GQLG ++NQ ++ L + + IA G + S A++++ ++
Sbjct: 814 TNNGYIYSSGYGRQGQLGLRNSENQCEFQLVWTLTKKKIIKIAAGWNHSLALSDQNDIFA 873
Query: 167 WGNAKDSQLGV 177
G+ QLG+
Sbjct: 874 CGHGARGQLGL 884
Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG++E G L G + P + P K L + + +S + ++ G+L
Sbjct: 545 IFAWGKNE-SGELSFGNQKQPF----YNKPENPKNLDRIYIKQISTSQNHSACISANGEL 599
Query: 61 WNWGANSNYELGRGDRVGGW--KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ G+ + +LG + K +++P ++++Q+A G YH+LALTD +V+SWG
Sbjct: 600 YVCGSALHGKLGLEELTMANINKFQMIPIFKGIKVLQVACGDYHTLALTDTDQVYSWGGT 659
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW-GNAKDSQLGV 177
H ++G Q P I+ L + V + CG SAA+T+ G +Y W G +D G
Sbjct: 660 LHKKVG----QRSGKPAPIQQLNKKGVIQVDCGDYHSAAITQNGDIYTWGGGGQDYNKGQ 715
Query: 178 PGL 180
GL
Sbjct: 716 LGL 718
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 65/121 (53%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
+ + CGG T++LT G +++ G +LG + + +L+ L +II+IA G
Sbjct: 800 IQNIKCGGHHTLLLTNNGYIYSSGYGRQGQLGLRNSENQCEFQLVWTLTKKKIIKIAAGW 859
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
HSLAL+D +F+ G+G GQLG +++ + + +L + I+ GG S AV +
Sbjct: 860 NHSLALSDQNDIFACGHGARGQLGLGDEESRTIFTHVVSLGGKNTATISAGGDHSWAVLD 919
Query: 161 K 161
+
Sbjct: 920 Q 920
>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
Length = 743
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA- 97
+ VA ++CG + +T G + WG LG GD +PKL+ L+ R I IA
Sbjct: 19 MSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIAC 78
Query: 98 -NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
+G +L +TDD V+SWG G +G+LG + K+P IE+LA V + CG S
Sbjct: 79 GSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSV 138
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
A+T+ G +Y WG +LG
Sbjct: 139 ALTKSGAVYTWGKGDFHRLG 158
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT+ G +
Sbjct: 94 VWSWG-DGDYGKLGRGG------SDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAV 146
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L +II IA G H +A +D G+V++WG
Sbjct: 147 YTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDE 206
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++ AL + + + CG + + A++
Sbjct: 207 GQLGDGTVTAIQWPRLVTALQGKHIVKVTCGSAHTLALS 245
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+ TWG+ GR G LG G ++ P V+AL ++CG T+ +T+
Sbjct: 39 HVLTWGK----GRYGRLGHGDSEDQLR----PKLVEALLGYRAIDIACGSGDAQTLCITD 90
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 91 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWG 150
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LGH + + P + AL + + IA G A ++ G++Y WG+ + QLG
Sbjct: 151 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 210
Query: 177 VPGLPVVQ 184
+ +Q
Sbjct: 211 DGTVTAIQ 218
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 74 GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV 133
G+R+ +PKL+ +L + + IA G HS A+T G V +WG G +G+LGH +++Q
Sbjct: 2 GNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLR 61
Query: 134 PMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
P ++EAL IACG + + +T+ ++ WG+ +LG
Sbjct: 62 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG 106
>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
Length = 1093
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
+LYTWG +G + GL G G + + +P +V P + V+++SCG + T ++T
Sbjct: 383 DLYTWG--DGTFKFGL-LGHGNDVSHW--VPKRVDG-PLEGIHVSSISCGPWHTALVTSA 436
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G S LG GDR P+ + +L +R ++ A G +H+ A+ +
Sbjct: 437 GQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 496
Query: 109 ---DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
GK+F+WG G G+LGH ++ VP + AL + +ACG + A+T G +Y
Sbjct: 497 NCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVY 556
Query: 166 MWGNAKDSQLGVPGLPVVQPCPVE 189
G+A QLG P + P VE
Sbjct: 557 TMGSAVYGQLGNPQADGLLPVRVE 580
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 22/181 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+++TWG D +GRLG G + +P+ V AL P V+CG T+ LT G
Sbjct: 502 KIFTWG-DGDKGRLGHG------DKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGH 554
Query: 60 LWNWGANSNYELGRGDRVGGWKP-----KLLPNLVDVRIIQIANGGYHSLALTDDGKVFS 114
++ G+ +LG + G P KL N V+ +I+ G YH LT +V++
Sbjct: 555 VYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVE----EISCGAYHVAVLTSRTEVYT 609
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
WG G +G+LGH T ++ P ++EAL D+ V + CG + +AA+ ++ W + D
Sbjct: 610 WGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAIC----IHKWVSGSDQS 665
Query: 175 L 175
+
Sbjct: 666 M 666
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A+ + V +SCGG ++T++G++++WG S LG G +PKL+ +L + I
Sbjct: 308 AVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIEL 367
Query: 96 IANGGYHSLALTDDGKVFSWGYG--GHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGG 152
+A G YH+ A+T G +++WG G G LGH + VP ++ L V+ I+CG
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGP 427
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A VT G+L+ +G D GV G
Sbjct: 428 WHTALVTSAGQLFTFG---DGSFGVLG 451
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 22/190 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + LS+P +V++L + +CG + T + E
Sbjct: 438 QLFTFG-DGSFGVLGHG------DRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 490
Query: 57 ---------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+++ WG LG GD+ + P + LV+ Q+A G ++ALT
Sbjct: 491 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALT 550
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYM 166
G V++ G +GQLG+ + +P+ +E L FV I+CG A +T + ++Y
Sbjct: 551 TSGHVYTMGSAVYGQLGNP-QADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYT 609
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 610 WGKGANGRLG 619
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L V + + I+ GG H+ +T G+++SWG G+LGH + P +I++LA
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ +ACG + AVT G LY WG+
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGD 389
>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
Length = 1152
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
EL+TWGR GRLG G P+ V +L V + CG T+ +T++
Sbjct: 315 ELFTWGRG-NYGRLGHGSSEDQ------LTPTLVVSLKGRRVIDICCGSGDAQTLAVTDD 367
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +W+WG +LGRG G PK++ L I+++ G SLALT G +++WG
Sbjct: 368 GTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGK 427
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LGH ++ + P +E L + V +A G +TE+G++Y WG QLG
Sbjct: 428 GDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLG 486
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G ++ K + + V V G M LT EG++
Sbjct: 211 EVYSWGNGDG-GRLG---------HGDTNVCYKGQKVLVIVYPYHPEGKHYMALTSEGEV 260
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRIIQIANGGYHSLALTDDGKVFSWG 116
++WG LG GD +P L+ L + ++ I G +S A+T DG++F+WG
Sbjct: 261 YSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWG 320
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQ 174
G +G+LGH +++Q P ++ +L V I CG + + AVT+ G ++ WG+ +
Sbjct: 321 RGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGK 380
Query: 175 LG 176
LG
Sbjct: 381 LG 382
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 48 GFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G M LT EG++++WG LG GD +K + V V + G H +ALT
Sbjct: 200 GKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQ----KVLVIVYPYHPEGKHYMALT 255
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE----FVTHIACGGSTSAAVTEKGK 163
+G+V+SWG G G+LGH T +++ P ++ L+ + V HI CG + SAA+T G+
Sbjct: 256 SEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGE 315
Query: 164 LYMWGNAKDSQLG 176
L+ WG +LG
Sbjct: 316 LFTWGRGNYGRLG 328
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G P + L + V CG F++ LT+ G +
Sbjct: 370 VWSWG-DGDYGKLGRGG------SDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTGHI 422
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G PK L L +++ +A G H L +T++G+V+ WG
Sbjct: 423 WTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQ 482
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
GQLG S + P ++ L + ++ IACG + S T G
Sbjct: 483 GQLGDSSFSTKSDPTLM-PLDGKSISGIACGPAQSFCWTSTG 523
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 24/142 (16%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG- 99
V ++C + LT+ G+++ +S + P+L+ +L D ++++A
Sbjct: 149 VLQLACAERCLIALTKTGRVYMCFYSSESQ----------GPQLMESLADKEVLKVAAHP 198
Query: 100 -GYHSLALTDDGKVFSWGYGGHGQLGHSFT----QNQKVPMVIEALADEFVTHIACGGST 154
G H +ALT +G+V+SWG G G+LGH T + QKV +++ E G
Sbjct: 199 EGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKVLVIVYPYHPE--------GKH 250
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
A+T +G++Y WGN +LG
Sbjct: 251 YMALTSEGEVYSWGNGDGGRLG 272
>gi|145495055|ref|XP_001433521.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400639|emb|CAK66124.1| unnamed protein product [Paramecium tetraurelia]
Length = 447
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 13/177 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
L++WG +E GRLG A + +PS + +L + +A ++ G F + + +G L
Sbjct: 204 LFSWGSNEF-GRLGQNAF-----AKCMKLPSPITSLGNLKIAKLALGTFHVLAIDTQGNL 257
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG +LG G KP + +L +R +A G HS+AL ++G V+ +G G
Sbjct: 258 YSWGRGLQGQLGHGTSNDCSKPNQISSLSSIR--DVACGEAHSMALQNNGSVYVFGSGQF 315
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + Q P +++ + IACG SA +T+ G L+M+GN + SQLG+
Sbjct: 316 GQLGLGDYKQQDAPQMLQIHGE----MIACGRHHSAVLTKNGALFMFGNNESSQLGL 368
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+++ WG + + +LG ++IP ++ + +P + + +TM + EEG+
Sbjct: 150 KIFVWGSNAYQ-QLGFDASEQ-----FVAIPHQLDSDNLPRIVDIYAQHNYTMAIDEEGR 203
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L++WG+N LG+ K P + +L +++I ++A G +H LA+ G ++SWG G
Sbjct: 204 LFSWGSNEFGRLGQNAFAKCMKLPSPITSLGNLKIAKLALGTFHVLAIDTQGNLYSWGRG 263
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH + + P I +L+ + +ACG + S A+ G +Y++G+ + QLG+
Sbjct: 264 LQGQLGHGTSNDCSKPNQISSLSS--IRDVACGEAHSMALQNNGSVYVFGSGQFGQLGL 320
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 8/128 (6%)
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYHSLALTDD 109
+ EE +++ WG+N+ +LG + +P+ +D RI+ I +++A+ ++
Sbjct: 145 VEEENKIFVWGSNAYQQLGFD---ASEQFVAIPHQLDSDNLPRIVDIYAQHNYTMAIDEE 201
Query: 110 GKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G++FSWG G+LG ++F + K+P I +L + + +A G A+ +G LY WG
Sbjct: 202 GRLFSWGSNEFGRLGQNAFAKCMKLPSPITSLGNLKIAKLALGTFHVLAIDTQGNLYSWG 261
Query: 169 NAKDSQLG 176
QLG
Sbjct: 262 RGLQGQLG 269
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 22/174 (12%)
Query: 27 GLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP 86
G+ IP +++ + A S +F + Q++ G+N +LG + V P
Sbjct: 63 GIQIPKQLELQDIEQIAASKEHWFAW---SDTQVFGCGSNKQGKLGMNNSVNT------P 113
Query: 87 NLVDV---------RIIQIANGGYHSLALTD---DGKVFSWGYGGHGQLGHSFT-QNQKV 133
L D+ ++ +IA G HS+AL + + K+F WG + QLG + Q +
Sbjct: 114 TLFDIFSEASQYGWQLQKIAVGLDHSVALIEVEEENKIFVWGSNAYQQLGFDASEQFVAI 173
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
P +++ + I + + A+ E+G+L+ WG+ + +LG P
Sbjct: 174 PHQLDSDNLPRIVDIYAQHNYTMAIDEEGRLFSWGSNEFGRLGQNAFAKCMKLP 227
>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
Length = 848
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 96/191 (50%), Gaps = 23/191 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVA-AVSCGGFFTMVLTEEGQ 59
E++TWG + G GRLG G +S P V++L + V +SCG F T +T G
Sbjct: 276 EVFTWGEEFG-GRLGHGTD------ADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGD 328
Query: 60 LWNWGANSNYE---LGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSW 115
L+NWG S Y LG G V W PK + L ++++ +A G +HS T GK++++
Sbjct: 329 LFNWGDGS-YNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTF 387
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE----------KGKLY 165
G G G LGH + P +EAL+ +ACG SAA+ E KLY
Sbjct: 388 GDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLY 447
Query: 166 MWGNAKDSQLG 176
WG+ ++LG
Sbjct: 448 TWGDGDKNRLG 458
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 19/201 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+LYT+G +G G+ G G E L+ P +V+AL V+CG + + + E
Sbjct: 383 KLYTFG----DGTFGV-LGHGDRET--LAYPKEVEALSGFKTIKVACGIWHSAAIVEVTN 435
Query: 57 -------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD 109
+L+ WG LG GD+ PK + L++ Q+A G ++AL
Sbjct: 436 QTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYDFHQLACGHNMTVALATS 495
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G+VF+ G +GQLG+ + ++ +V + LA E V I+CG S +T + ++Y WG
Sbjct: 496 GRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGM 555
Query: 170 AKDSQLGVPGLP-VVQPCPVE 189
+ +LG L +PC VE
Sbjct: 556 GANGRLGHGDLKDRKKPCLVE 576
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 14/177 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LYTWG D + RLG G + P +P V+AL ++CG T+ L G+
Sbjct: 445 KLYTWG-DGDKNRLGHG-DKEPR-----LVPKCVQALLEYDFHQLACGHNMTVALATSGR 497
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ-IANGGYHSLALTDDGKVFSWGYG 118
++ G++SN +LG + G +P L+ + + +++ I+ G H LT +V++WG G
Sbjct: 498 VFTMGSSSNGQLG-NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMG 556
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+G+LGH +++K P ++EAL D V I+CG + + + ++ W + D +
Sbjct: 557 ANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCIC----IHKWVSGADQSV 609
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 21/173 (12%)
Query: 22 PNEAGGLSIPSKVKAL-PVP--------VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
P++ S SKV L P P V ++CG + T +G+++ WG LG
Sbjct: 230 PSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLG 289
Query: 73 RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH--GQLGH----S 126
G +PKL+ +L + I+ G +H+ A+T G +F+WG G + G LG S
Sbjct: 290 HGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVS 349
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +KV +E L V +ACG SA T GKLY +G D GV G
Sbjct: 350 YWLPKKVSGPLEGLQ---VLSVACGSWHSALTTSSGKLYTFG---DGTFGVLG 396
>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Takifugu rubripes]
Length = 3883
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG + N +P+ VK + V V+CG T+ + ++G+
Sbjct: 540 ELYTWG--EGDFGRLGHSDSQSRN------MPTLVKDIS-GVGQVACGSSHTIAVAQDGR 590
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD ++PK++ L I ++ G SLALT G+VF+WG G
Sbjct: 591 TVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCG 650
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV- 177
G S T + + P +E L+ + I+CG S A++ + ++Y WGN Q G
Sbjct: 651 SCLGCGSSETTSLR-PRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQG 709
Query: 178 -PGLPVVQP 185
P+ +P
Sbjct: 710 HTSTPITRP 718
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 89/179 (49%), Gaps = 12/179 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G G N L++P+ +L V CG + ++ G +
Sbjct: 3021 DVYLWG----NGRYGQLAGTGTN----LTVPTLAPSLS-QTQQVVCGQNCSFLIQSNGVV 3071
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G LG+G+ + P ++ V +++ HS+ALT+ G+VFSWG
Sbjct: 3072 TAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGD 3131
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH + Q+ P IEAL E V +ACG SA VT GKL+ +G+ + +LG
Sbjct: 3132 GDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLG 3190
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 97/171 (56%), Gaps = 14/171 (8%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP----VPVAAVSCGGFFTMVLTEEGQLWNWGANS 67
GRLGLG ++ S+P K+ P V++ T+ +T +G++++WG
Sbjct: 442 GRLGLG------DSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGE 495
Query: 68 NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY-HSLALTDDGKVFSWGYGGHGQLGHS 126
+LG G+ PK++ + +I+ A+ GY HS A+T DG++++WG G G+LGHS
Sbjct: 496 YGKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHS 555
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK-LYMWGNAKDSQLG 176
+Q++ +P +++ ++ V +ACG S + AV + G+ ++ +G + +LG
Sbjct: 556 DSQSRNMPTLVKDISG--VGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLG 604
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 10 GEGRLG-LGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGF-FTMVLTEEGQLWNWG 64
GEG+ G LG G + L +P+ + A V SCG +M LTE G++++WG
Sbjct: 3075 GEGQYGRLGQGNSDD----LYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWG 3130
Query: 65 ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
+LG G+ +PK + L ++Q+A G HS +T DGK+F++G G G+LG
Sbjct: 3131 DGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLG 3190
Query: 125 HSFTQNQKVPMVIEALADEFVTHIACG 151
T N+ +P + AL V ++CG
Sbjct: 3191 QRSTSNKMLPERVAALEGYHVGQVSCG 3217
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK--LLPNLVDVRIIQIANGG 100
+ G + T ++ +G + G S LG GD PK +L +++ + + G
Sbjct: 416 TIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGS 475
Query: 101 Y-HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAV 158
H+LA+T DG+VFSWG G +G+LGH + QK P +I+ L + V + G SAAV
Sbjct: 476 DGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAV 535
Query: 159 TEKGKLYMWGNAKDSQLG 176
T+ G+LY WG +LG
Sbjct: 536 TKDGELYTWGEGDFGRLG 553
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 10/188 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G E GRLG +P +V AL V VSCG T+VL+ +G
Sbjct: 3177 KLFTFGSGES-GRLG------QRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDGM 3229
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W +G +LG G + P+ + L + + ++ G S+ + DG V+++G
Sbjct: 3230 AVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQE 3289
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
L S +N+ P V+ +L F+ IA G A++ G +Y WG + QLG+
Sbjct: 3290 RLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLG 3349
Query: 179 GL-PVVQP 185
PV +P
Sbjct: 3350 HCNPVKEP 3357
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P KV+ L + V CG F++V+ +G ++ +G L P+++P+L
Sbjct: 3253 PQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLE 3312
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
+ I IA G H LAL+ G V++WG GQLG K P +I AL + + I+
Sbjct: 3313 GLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNPVKEPTLITALQGKNIKQIS 3372
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
G S+A T G + QLG+P
Sbjct: 3373 AGRCHSSAWTTPSTSKNSGGPGNLQLGLP 3401
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
+++ WG G G G +E L P V+ L + + +SCG + L+ E +
Sbjct: 643 QVFAWG-------CGSCLGCGSSETTSLR-PRFVEDLSITKIIDISCGDSHCLALSHENE 694
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALT---DDGKVFSW 115
++ WG N+ + G+G +PK + L V I QI G HSLA T D ++ +W
Sbjct: 695 VYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 754
>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1105
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 21/192 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEEG 58
+LYTWG+ + G LG G NE +P +V L + V++++CG + T V+T G
Sbjct: 384 DLYTWGKGDF-GILGHG-----NEVSHW-VPKRVNFLMEGIHVSSIACGPYHTAVVTSAG 436
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
QL+ +G + LG GDR + P+ + +L +R ++ A G +H+ A+ +
Sbjct: 437 QLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 496
Query: 109 --DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
GK+F+WG G +LGH + + VP + AL + +ACG S + A+T G +Y
Sbjct: 497 CSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYT 556
Query: 167 WGNAKDSQLGVP 178
G+ QLG P
Sbjct: 557 MGSPVYGQLGNP 568
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 12/176 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+L+TWG D + RLG G + P +P+ V AL P V+CG T+ LT G
Sbjct: 501 KLFTWG-DGDKSRLGHG-DKEPK-----LVPTCVAALVEPNFCQVACGHSLTVALTTSGH 553
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+ +LG G ++ L + +IA G YH LT +V++WG G
Sbjct: 554 VYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGS 613
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+G+LGH ++ P ++E+L D+ V IACG + +AAV L+ W + D +
Sbjct: 614 NGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVC----LHKWASGMDQSM 665
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V ++CGG +++T++G+ ++WG S LG G PKL+ L I +A G
Sbjct: 314 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGE 373
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVT 159
YHS A+T G +++WG G G LGH + VP + L + V+ IACG +A VT
Sbjct: 374 YHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVT 433
Query: 160 EKGKLYMWGN 169
G+L+ +G+
Sbjct: 434 SAGQLFTFGD 443
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L + + + + IA GG H++ +T G+ FSWG G+LGH N + P +I+AL
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 362
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWG 168
+ +ACG S AVT G LY WG
Sbjct: 363 TTNIELVACGEYHSCAVTLSGDLYTWG 389
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D I+ +A G
Sbjct: 36 VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADEHIVHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T+ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTEE-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 14/181 (7%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLN-TKGQLGHEREGNKPEQIGALADEH--------IVHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG-RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L++WGA S+ +LG P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKN 164
Query: 119 GHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG QLG
Sbjct: 165 SHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 177 V 177
+
Sbjct: 224 L 224
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
ADE + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEEDRES------PCHVKLLRAQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA 149
GQLG T N K P ++ A AD F HI
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIV 364
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG + L E+G+++ G N+ +LG +R G +P+ + L D II +A G
Sbjct: 36 VKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGH-EREGN-QPEQIGALADQHIIHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 TDGQFFTWGKNSHGQLGL 171
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG E + P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLG-----KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L+++GQ
Sbjct: 54 EVYTCGLNT-KGQLGHEREGNQPEQIGALADQH--------IIHVACGESHSLALSDQGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
D + ++A GG H + L +DG+V++ G GQLGH NQ P I ALAD+ + H+A
Sbjct: 33 DRSVKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQ--PEQIGALADQHIIHVA 90
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
CG S S A++++G+L+ WG D QLG+
Sbjct: 91 CGESHSLALSDQGQLFSWGAGSDGQLGL 118
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA 149
GQLG T N K P ++ A AD F HI
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIV 364
>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
Length = 863
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRG-----PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
+LYTWG +G GL G G P GG V V++V+CG + T+++
Sbjct: 195 DLYTWG--DGTHNFGLLGHGNSISHWTPKRVGG-------PLEGVRVSSVACGPWHTVLV 245
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD------ 108
T GQL+++G + LG GDR P+ + +L ++ ++ A G +H+ A+ +
Sbjct: 246 TSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSRYS 305
Query: 109 ------DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
GK+F+WG G +LGH + + VP + AL D +ACG S + A+T G
Sbjct: 306 NAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTG 365
Query: 163 KLYMWGNAKDSQLGVP 178
LY G+ QLG P
Sbjct: 366 HLYTMGSVSYGQLGDP 381
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 24/166 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAA--------VSCGGFFTM 52
+L+TWG D + RLG G + K +P VAA V+CG T+
Sbjct: 314 KLFTWG-DGDKNRLGHGD-------------KEQKLVPTCVAALVDHNFRQVACGHSLTV 359
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
LT G L+ G+ S +LG + G P +L L I +++ G YH ALT G V
Sbjct: 360 ALTTTGHLYTMGSVSYGQLG-DPQATGRLPGVL-RLGRTLIEEVSCGAYHVAALTSKGDV 417
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
+WG G +G+LGH +++ VP ++EAL D+ V ++CG S ++A+
Sbjct: 418 CTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAI 463
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 58 GQLWNWGAN-----SNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
G+LW WG +L R + P+ + +LV + + QIA G H+ +T G+V
Sbjct: 85 GELWMWGEGIGDGGVTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHTALVTRQGEV 144
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
FSWG G+LGH + P +I++LA V ++ACG S AVT+ G LY WG+
Sbjct: 145 FSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGD 201
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
EL+ WG EG G G+ + +P V++L V V ++CG T ++T +G+
Sbjct: 86 ELWMWG--EGIGDGGVTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHTALVTRQGE 143
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG S LG G P+L+ +L + +A G YHS A+T G +++WG G
Sbjct: 144 VFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGT 203
Query: 120 H--GQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
H G LGH + + P + L V+ +ACG + VT G+L+ +G+
Sbjct: 204 HNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLFSFGD 256
>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1044
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 97/191 (50%), Gaps = 23/191 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVA-AVSCGGFFTMVLTEEGQ 59
E++TWG + G GRLG G +S P V++L + V +SCG F T +T G
Sbjct: 276 EVFTWGEEFG-GRLGHGTD------ADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGD 328
Query: 60 LWNWGANSNYE---LGRGDRVGGWKPKLLPNLVD-VRIIQIANGGYHSLALTDDGKVFSW 115
L+NWG S Y LG G V W PK + ++ ++++ +A G +HS T GK++++
Sbjct: 329 LFNWGDGS-YNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTF 387
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE----------KGKLY 165
G G G LGH + P +EAL+ +ACG SAA+ E KLY
Sbjct: 388 GDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLY 447
Query: 166 MWGNAKDSQLG 176
WG+ ++LG
Sbjct: 448 TWGDGDKNRLG 458
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 19/201 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+LYT+G +G G+ G G E L+ P +V+AL V+CG + + + E
Sbjct: 383 KLYTFG----DGTFGV-LGHGDRET--LAYPKEVEALSGFKTIKVACGIWHSAAIVEVTN 435
Query: 57 -------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD 109
+L+ WG LG GD+ PK + L++ Q+A G ++AL
Sbjct: 436 QTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALATS 495
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
G+VF+ G +GQLG+ + ++ +V + LA E V I+CG S +T + ++Y WG
Sbjct: 496 GRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGM 555
Query: 170 AKDSQLGVPGLP-VVQPCPVE 189
+ +LG L +PC VE
Sbjct: 556 GANGRLGHGDLKDRKKPCLVE 576
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 88/160 (55%), Gaps = 10/160 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LYTWG D + RLG G + P +P V+AL ++CG T+ L G+
Sbjct: 445 KLYTWG-DGDKNRLGHG-DKEPR-----LVPKCVQALLEYNFHQLACGHNMTVALATSGR 497
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ-IANGGYHSLALTDDGKVFSWGYG 118
++ G++SN +LG + G +P L+ + + +++ I+ G H LT +V++WG G
Sbjct: 498 VFTMGSSSNGQLG-NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMG 556
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
+G+LGH +++K P ++EAL D V I+CG + + +
Sbjct: 557 ANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCI 596
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 22 PNEAGGLSIPSKVKAL-PVP--------VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
P++ S SKV L P P V ++CG + T +G+++ WG LG
Sbjct: 230 PSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLG 289
Query: 73 RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH--GQLGH----S 126
G +PKL+ +L + I+ G +H+ A+T G +F+WG G + G LG S
Sbjct: 290 HGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVS 349
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ +KV +E L V +ACG SA T GKLY +G+
Sbjct: 350 YWLPKKVSGPLEGLQ---VLSVACGSWHSALTTSSGKLYTFGD 389
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P +K L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLTTIED-----AVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 SSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +VK+L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGQN-SYGQLGLGK-ECPSQAS----PQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG NS+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L V+ IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG G KP+ + L I+ +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHD--CEGSKPEQIGALAGQHIVHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG + ++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGQNSYGQLGL 171
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLG-PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L+++GQ
Sbjct: 54 EVYTCGLN-TKGQLGHDCEGSKPEQIGALAGQH--------IVHVACGESHSLALSDQGQ 104
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L++WGA S+ +LG P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQN 164
Query: 119 GHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG +Q P +++L + +A GG+ S A++ G ++ WG QLG+
Sbjct: 165 SYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGL 224
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH ++ P I AL
Sbjct: 24 EPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
A + + H+ACG S S A++++G+L+ WG D QLG+ +
Sbjct: 82 AGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTI 121
>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
Length = 863
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV--KALPVPVAAVSCGGFFTMVLTEEG 58
+LYTWG +G GL G G N + P +V V V++V+CG + T+++T G
Sbjct: 195 DLYTWG--DGTHNFGL-LGHGNNISHW--TPKRVGGPLEGVRVSSVACGPWHTVLVTSTG 249
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
QL+++G + LG GDR P+ + +L ++ ++ A G +H+ A+ +
Sbjct: 250 QLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSRYSNAGS 309
Query: 109 --DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
GK+F+WG G +LGH + + VP + AL D +ACG S + A+T G LY
Sbjct: 310 SLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGHLYT 369
Query: 167 WGNAKDSQLGVP 178
G+ QLG P
Sbjct: 370 MGSVSYGQLGDP 381
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 10/159 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L+TWG D + RLG G + +P+ V AL V+CG T+ LT G
Sbjct: 314 KLFTWG-DGDKNRLGHG------DKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGH 366
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ G+ S +LG + G P +L L I +++ G YH ALT G V +WG G
Sbjct: 367 LYTMGSVSYGQLG-DPQATGRLPGVL-RLGRTLIEEVSCGAYHVAALTSKGDVCTWGKGA 424
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
+G+LGH +++ VP ++EAL D+ V ++CG S ++A+
Sbjct: 425 NGRLGHGDAEDRDVPSLVEALRDKQVKKVSCGSSFTSAI 463
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 58 GQLWNWGANS-----NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
G+LW WG +L R + P+ + +LV + + QIA G H+ +T G+V
Sbjct: 85 GELWMWGEGIGDGGGTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHAALVTRQGEV 144
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
FSWG G+LGH + P +I++LA V ++ACG S AVT+ G LY WG+
Sbjct: 145 FSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGD 201
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 30 IPSKVKALPV-PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P V++L V V ++CG ++T +G++++WG S LG G P+L+ +L
Sbjct: 113 LPRAVRSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSL 172
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIEA-LADEFV 145
+ +A G YHS A+T G +++WG G H G LGH + P + L V
Sbjct: 173 ASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRV 232
Query: 146 THIACGGSTSAAVTEKGKLYMWGN 169
+ +ACG + VT G+L+ +G+
Sbjct: 233 SSVACGPWHTVLVTSTGQLFSFGD 256
>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 418
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 37 LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQ 95
L V V +V+ G T+ + +G +W +G N+ +LG G+ V G P+ + L + R+ Q
Sbjct: 116 LDVEVVSVAAGNGHTLCVDVDGCVWAFGKNTAGQLGTGN-VDGTIPRKIGALAKEARVAQ 174
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQN----------QKVPMVIEALADEF 144
+A G HSLA+ DDG+V+SWG G LGH S T N + P ++ +L D+
Sbjct: 175 VACGAEHSLAVADDGRVYSWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKK 234
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPV---VQPCPV 188
V +A G SA + ++G LY WG + +QLG+ P P PV
Sbjct: 235 VVAVAAGHMHSACIDDRGNLYTWGQGRFNQLGLSAKPSDHETTPSPV 281
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 25/178 (14%)
Query: 21 GPNEAGGL-------SIPSKVKALP--VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
G N AG L +IP K+ AL VA V+CG ++ + ++G++++WG++++ L
Sbjct: 143 GKNTAGQLGTGNVDGTIPRKIGALAKEARVAQVACGAEHSLAVADDGRVYSWGSSTDGVL 202
Query: 72 GRGDRV--GGW---------KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G G GW P+L+ +L D +++ +A G HS + D G +++WG G
Sbjct: 203 GHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACIDDRGNLYTWGQGRF 262
Query: 121 GQLGHSF--TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG S + ++ P + +L FV IACGG S A T G + WG + +LG
Sbjct: 263 NQLGLSAKPSDHETTPSPVMSL--RFVHEIACGGLHSLANTNAG-VVSWGANQHGELG 317
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 31 PSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P V++L V AV+ G + + + G L+ WG +LG + + P +
Sbjct: 224 PRLVRSLEDKKVVAVAAGHMHSACIDDRGNLYTWGQGRFNQLGLSAKPSDHETTPSPVMS 283
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK--VPMVIEALADEFVTH 147
+ +IA GG HSLA T+ G V SWG HG+LGH + K VP I+ + +
Sbjct: 284 LRFVHEIACGGLHSLANTNAG-VVSWGANQHGELGHGHHSDIKSAVPKPIK-MGSRGWSK 341
Query: 148 IACGGSTSAAVTEKGKLYMWG 168
+A G SA + GKL+ WG
Sbjct: 342 LAAGWKHSAGIA-NGKLFAWG 361
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 58/155 (37%), Gaps = 57/155 (36%)
Query: 79 GWKPKL------LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS------ 126
GW P+ + + D+ + +A GG HS+ L G VF+ G GQLGHS
Sbjct: 49 GWSPRSSNYFHPVEGVSDLDVRAVAAGGAHSVFLVAGGHVFTCGLNADGQLGHSAGLPFS 108
Query: 127 ---------------------------------FTQNQ-----------KVPMVIEALAD 142
F +N +P I ALA
Sbjct: 109 PEPMLVRLDVEVVSVAAGNGHTLCVDVDGCVWAFGKNTAGQLGTGNVDGTIPRKIGALAK 168
Query: 143 EF-VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
E V +ACG S AV + G++Y WG++ D LG
Sbjct: 169 EARVAQVACGAEHSLAVADDGRVYSWGSSTDGVLG 203
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 21/126 (16%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAA------VSCGGFFTMVL 54
LYTWG +GR N+ G + PS + P PV + ++CGG ++
Sbjct: 253 NLYTWG----QGRF--------NQLGLSAKPSDHETTPSPVMSLRFVHEIACGGLHSLAN 300
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-IIQIANGGYHSLALTDDGKVF 113
T G + +WGAN + ELG G P + R ++A G HS + + GK+F
Sbjct: 301 TNAGVV-SWGANQHGELGHGHHSDIKSAVPKPIKMGSRGWSKLAAGWKHSAGIAN-GKLF 358
Query: 114 SWGYGG 119
+WG+GG
Sbjct: 359 AWGFGG 364
>gi|322785446|gb|EFZ12117.1| hypothetical protein SINV_05294 [Solenopsis invicta]
Length = 585
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 96/180 (53%), Gaps = 9/180 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y+WG + G LG G GL P++V +L + + ++CG ++ L E+G+
Sbjct: 150 KVYSWGHN---GYCELGNGTCNQ---GL-YPTQVNSLGIKRIVDIACGSHHSVALNEDGE 202
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLL-PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG N+ + G P+ + NL ++ QIA G ++AL ++G+V+ WGY
Sbjct: 203 IYAWGQNNCGQAGSSITTNQGVPRQVNSNLAGKKVAQIACGQTSTVALLENGEVYGWGYN 262
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
G GQLG NQ P I L + +ACG + A+T++G+LY+WG QLG+
Sbjct: 263 GVGQLGIGNYVNQMTPCRIGTLLGTVIVKVACGYVHTLALTDEGQLYVWGGNSYGQLGIS 322
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 18/185 (9%)
Query: 1 ELYTWGRDE-GEGRLGLGPGRGPNEAGGLSIPSKVKALPV--PVAAVSCGGFFTMVLTEE 57
E+Y WG++ G+ + +G +P +V + VA ++CG T+ L E
Sbjct: 202 EIYAWGQNNCGQAGSSITTNQG--------VPRQVNSNLAGKKVAQIACGQTSTVALLEN 253
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N +LG G+ V P + L+ I+++A G H+LALTD+G+++ WG
Sbjct: 254 GEVYGWGYNGVGQLGIGNYVNQMTPCRIGTLLGTVIVKVACGYVHTLALTDEGQLYVWGG 313
Query: 118 GGHGQLGHSFTQNQKVPMVIE----ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
+GQLG S N P++++ ++D H TS AV E G++YMWG+ +
Sbjct: 314 NSYGQLGISNKTNACNPVLVKHEMGRVSDIAALHY---NHTSVAVGEGGRVYMWGHCRGQ 370
Query: 174 QLGVP 178
+ P
Sbjct: 371 SITTP 375
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+++T + ++ G+N LG GD PK + L + I A G G H LALT +G
Sbjct: 83 LIVTRDKMVYALGSNIAGCLGTGDAHSTLYPKKVDALCEKDIKMFAYGSGPHVLALTKEG 142
Query: 111 -------KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
KV+SWG+ G+ +LG+ P + +L + + IACG S A+ E G+
Sbjct: 143 EVRLYLRKVYSWGHNGYCELGNGTCNQGLYPTQVNSLGIKRIVDIACGSHHSVALNEDGE 202
Query: 164 LYMWGNAKDSQLG 176
+Y WG Q G
Sbjct: 203 IYAWGQNNCGQAG 215
>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 1205
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 68/136 (50%)
Query: 33 KVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR 92
KV+A PV V S G +M T +G LW WG N LG G G P ++ ++D
Sbjct: 246 KVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRD 305
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
I+ + G HS + G +++WG GG G+LGH VP +E V +ACG
Sbjct: 306 IVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGT 365
Query: 153 STSAAVTEKGKLYMWG 168
+ A+T KG ++ WG
Sbjct: 366 FHTLALTHKGTVFAWG 381
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 96/217 (44%), Gaps = 48/217 (22%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
LYTWG G GRLG G + G + +P KV+ VPV V+CG F T+ LT +G +
Sbjct: 325 LYTWGSG-GFGRLGHG------DQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTV 377
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVR--IIQIANGGYHSLALTDDGKVFSWGYG 118
+ WGA G G+ G + +L D+ ++ IA G YHS A+T G + WG G
Sbjct: 378 FAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVG 437
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEF---------------------------------- 144
G +LGH QNQ P + L +
Sbjct: 438 GSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQ 497
Query: 145 ----VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ + CG S + A+T G +++WG+ D QLG+
Sbjct: 498 SSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGL 534
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 31 PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP------- 82
PS+V+ +A +SCG T+ L++EG L+ WG S LG+GD + P
Sbjct: 172 PSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGS 231
Query: 83 -----KLLPNL------VDVRIIQIANGG-YHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
K N+ D I+ + G HS+A T DG +++WG+GG+G+LG +
Sbjct: 232 EAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRG 291
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
P V++ + D + + G S SA + +G LY WG+ +LG
Sbjct: 292 SLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLG 337
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 86/177 (48%), Gaps = 8/177 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+TWG G GRLGLG RG LS L + V+ G + + +G L+
Sbjct: 273 LWTWGHG-GNGRLGLGHNRGS-----LSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLY 326
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG+ LG GD+ P+ + V ++Q+A G +H+LALT G VF+WG G
Sbjct: 327 TWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLAL 386
Query: 122 QLGHSFTQNQKVPMVIEALAD--EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + + V + L+D V +IA G SAAVT G L +WG S+LG
Sbjct: 387 GFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLG 443
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIAN 98
+ ++ CG T+ LT G +W WG+N + +LG G+ V ++P L I +IA
Sbjct: 502 LQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKL-ECFSTPIRRIAC 560
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H LA+ G VF+WG +GQLG + P + AL + CG SA +
Sbjct: 561 GSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQ--AVDVFCGDDYSACI 618
Query: 159 --------------TEKGKLYMWGNAKDSQLGV 177
TE G L+ WG A+ +LG+
Sbjct: 619 TSLGGAQSVSGETGTEFGDLWAWGAAESGKLGL 651
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 84/201 (41%), Gaps = 34/201 (16%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVS-------------CG 47
+L+ WG E G+LGLG +G + P KV VPV A S C
Sbjct: 637 DLWAWGAAE-SGKLGLGEDVA---SGSILTPQKV-VFSVPVCACSLDSLEMQAYKRVFCV 691
Query: 48 GF--------FTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG 99
F ++ +T +G+ + WGA LG G + P VR+ +A G
Sbjct: 692 SFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAG 751
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE----FVTHIACGGSTS 155
HSLAL+ DG ++ WG + T N P + L + V I+ S
Sbjct: 752 ACHSLALSMDGDLWFWGR----REDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHS 807
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
AVTE G+++ WG+ K Q G
Sbjct: 808 LAVTEAGEVFAWGDNKLYQTG 828
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 46/180 (25%)
Query: 44 VSCGGFFTMVLTEE-----GQLWNWGANSNYELG----RGDRVGGW-------------- 80
VSCG + VL + G+++ +G + LG + D V G+
Sbjct: 107 VSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPS 166
Query: 81 ----KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMV 136
KP + +I +I+ G H+LAL+D+G +++WG G +G LG T + P+
Sbjct: 167 WFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVR 226
Query: 137 I------------------EALADE-FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ + AD VT + G S A T G L+ WG+ + +LG+
Sbjct: 227 VYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGL 286
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 39/210 (18%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG ++ +G+LGLG ++ P K++ P+ ++CG + + + G ++
Sbjct: 521 VWVWGSND-DGQLGLGEDVEEDQYE----PVKLECFSTPIRRIACGSKHCLAVAQYGDVF 575
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLV---------DVRIIQIANGGYHSLA---LTDD 109
WGAN N +LG G ++P + L D + GG S++ T+
Sbjct: 576 AWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEF 635
Query: 110 GKVFSWGYGGHGQLGH-------SFTQNQKVPMVI-------EALADEFVTHIAC----- 150
G +++WG G+LG S QKV + ++L + + C
Sbjct: 636 GDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSP 695
Query: 151 ---GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G S S A+T +G+ Y WG +LG+
Sbjct: 696 LCSGTSHSLAITAQGECYAWGAGYYGRLGI 725
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 37/173 (21%)
Query: 38 PVPVAAVSCGGFFTMVLTEEG---QLWNWGANSNYELGRG----DRVGGWKPKLLPNLVD 90
P V V+ G + T+V+ +G QL+ WG N + LG G +RV P L+P
Sbjct: 45 PASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERV---FPGLVPFFSK 101
Query: 91 VRIIQIANGGYHSLALTDD-----GKVFSWGYGGHGQLGHSFTQNQKV------------ 133
+ +++ G +S L GKV+++G G G+LG+ + V
Sbjct: 102 MGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQ 161
Query: 134 ----------PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
P + + I+CG + A++++G LY WG LG
Sbjct: 162 EDGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLG 214
>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1139
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 21/192 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEEG 58
+LYTWG+ + G LG G NE +P +V L + V++++CG + T V+T G
Sbjct: 418 DLYTWGKGDF-GILGHG-----NEVSHW-VPKRVNFLMEGIHVSSIACGPYHTAVVTSAG 470
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
QL+ +G + LG GDR + P+ + +L +R ++ A G +H+ A+ +
Sbjct: 471 QLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 530
Query: 109 --DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
GK+F+WG G +LGH + + VP + AL + +ACG S + A+T G +Y
Sbjct: 531 CSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYT 590
Query: 167 WGNAKDSQLGVP 178
G+ QLG P
Sbjct: 591 MGSPVYGQLGNP 602
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 12/176 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+L+TWG D + RLG G + P +P+ V AL P V+CG T+ LT G
Sbjct: 535 KLFTWG-DGDKSRLGHG-DKEPK-----LVPTCVAALVEPNFCQVACGHSLTVALTTSGH 587
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+ +LG G ++ L + +IA G YH LT +V++WG G
Sbjct: 588 VYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGS 647
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+G+LGH ++ P ++E+L D+ V IACG + +AAV L+ W + D +
Sbjct: 648 NGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVC----LHKWASGMDQSM 699
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
+ V ++CGG +++T++G+ ++WG S LG G PKL+ L I +A
Sbjct: 346 LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVAC 405
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAA 157
G YHS A+T G +++WG G G LGH + VP + L + V+ IACG +A
Sbjct: 406 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 465
Query: 158 VTEKGKLYMWGN 169
VT G+L+ +G+
Sbjct: 466 VTSAGQLFTFGD 477
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L + + + + IA GG H++ +T G+ FSWG G+LGH N + P +I+AL
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 396
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWG 168
+ +ACG S AVT G LY WG
Sbjct: 397 TTNIELVACGEYHSCAVTLSGDLYTWG 423
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG ++ G+LGLG P E S P+ V +L +P A ++CG T +++ G
Sbjct: 157 EIFVWGANDF-GQLGLG-TITPYE----STPTTVCSLSGIPFALIACGANHTFAVSKSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N N +LG D V P L L + R+ I+ G S LT DG VFS G G
Sbjct: 211 VFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGM 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA-VTEKGKLYMW 167
+GQLGH T N+ +P + L +T I+CG S A V +G++Y +
Sbjct: 271 YGQLGHGGTSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V + G T+ LT++G++++ G+N +LG +P+L+ L II +A G
Sbjct: 36 VMKAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQPRK--RPQLVSGLDAYSIINVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+ G+VFSWG +GQLGH Q VP +I++LA V IA G S A+T
Sbjct: 94 MHSLALSRWGEVFSWGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALT 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G++++WG QLG+
Sbjct: 154 NAGEIFVWGANDFGQLGL 171
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKAL-PVPVAAVSCGGFFTMVLTEEG 58
E+++WG D G+LG G G L I P +K+L V ++ G ++ LT G
Sbjct: 104 EVFSWGSD-NYGQLGHQLG------GTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAG 156
Query: 59 QLWNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+++ WGAN +LG G + ++ P + +L + IA G H+ A++ G VF WG
Sbjct: 157 EIFVWGANDFGQLGLG-TITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWG 215
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG + T ++K P + L + V I+CG S +T G ++ G QLG
Sbjct: 216 KNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLG 275
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 60 LWNWGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG+ + ELG G + + PK L +++ A G H+L LT DGKV+S G
Sbjct: 1 MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH Q +K P ++ L + ++ACG S A++ G+++ WG+ QLG
Sbjct: 61 NDYGQLGHD--QPRKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLG 117
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL N+ P++++ L V +SCG F+ LT +G +
Sbjct: 211 VFGWGKNIN-GQLGL------NDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
++ GA +LG G P+ + L+ I QI+ G HSLA G+V+S+G GG
Sbjct: 264 FSCGAGMYGQLGHGGTSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSYGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVI 137
GQLG N P V+
Sbjct: 324 AGQLGLRKPSNASTPQVV 341
>gi|145594132|ref|YP_001158429.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303469|gb|ABP54051.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 570
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 84/184 (45%), Gaps = 7/184 (3%)
Query: 5 WGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWG 64
WG D G+LG G G N +S+P+ A AV G F ++ LT G + WG
Sbjct: 62 WG-DNAFGQLGDGTTTGSNTPLPVSLPAGTDA-----TAVVAGDFHSLALTSAGTVLAWG 115
Query: 65 ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
N + +LG G V P ++ V V + +A G HSLALT G V +WG GQLG
Sbjct: 116 RNDSGQLGDGTTVSSSTPVVVRLPVGVTVTAVAAGFGHSLALTSTGVVLAWGSNSFGQLG 175
Query: 125 HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQ 184
T + P+ + VT +A G S A+T G WGN QLG G V
Sbjct: 176 DGTTVSSSTPVAVRLPVGVTVTAVAAGSGHSLALTSVGAALAWGNNFSGQLG-DGTTVSS 234
Query: 185 PCPV 188
PV
Sbjct: 235 STPV 238
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV--PVAAVSCGGFFTMVLTEEG 58
+ WGR++ G+LG G S P V+ LPV V AV+ G ++ LT G
Sbjct: 110 TVLAWGRND-SGQLGDG------TTVSSSTPVVVR-LPVGVTVTAVAAGFGHSLALTSTG 161
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG+NS +LG G V P + V V + +A G HSLALT G +WG
Sbjct: 162 VVLAWGSNSFGQLGDGTTVSSSTPVAVRLPVGVTVTAVAAGSGHSLALTSVGAALAWGNN 221
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG T + P+ + VT +A G S A+T G WG QLG
Sbjct: 222 FSGQLGDGTTVSSSTPVAVRLPVGTTVTAVAGGSHHSLALTSAGAALAWGGNFSGQLG 279
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 29 SIPSKVKALPV--PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP 86
S P V+ LPV V AV+ G ++ LT G WG N + +LG G V P +
Sbjct: 183 STPVAVR-LPVGVTVTAVAAGSGHSLALTSVGAALAWGNNFSGQLGDGTTVSSSTPVAVR 241
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVT 146
V + +A G +HSLALT G +WG GQLG T + P+V+ VT
Sbjct: 242 LPVGTTVTAVAGGSHHSLALTSAGAALAWGGNFSGQLGDGTTVSSSTPVVVSLPVGTTVT 301
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+A G + S A+T G WG+ D QLG
Sbjct: 302 ALAGGDAHSVALTSAGAALAWGSNGDGQLG 331
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 68/151 (45%), Gaps = 4/151 (2%)
Query: 29 SIPSKVKALPV--PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP 86
S P V+ LPV V AV+ G ++ LT G WG N + +LG G V P ++
Sbjct: 235 STPVAVR-LPVGTTVTAVAGGSHHSLALTSAGAALAWGGNFSGQLGDGTTVSSSTPVVVS 293
Query: 87 NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFV 145
V + +A G HS+ALT G +WG G GQLG + VP+ +
Sbjct: 294 LPVGTTVTALAGGDAHSVALTSAGAALAWGSNGDGQLGDGTNADSSVPIAVSLPAGATIT 353
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A G+ + A+T G WG D QLG
Sbjct: 354 AIAAHDGAHNLAITSTGAALAWGGNGDGQLG 384
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 37 LPV--PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKL--LPNLVDVR 92
LPV V A++ G ++ LT G WG+N + +LG G P LP
Sbjct: 294 LPVGTTVTALAGGDAHSVALTSAGAALAWGSNGDGQLGDGTNADSSVPIAVSLPAGA-TI 352
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
A+ G H+LA+T G +WG G GQLG + VP+ + A +T IA
Sbjct: 353 TAIAAHDGAHNLAITSTGAALAWGGNGDGQLGDGTNADSSVPIAVSLPAGTTITAIAA 410
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+WG GQLG T P+ + A T + G S A+T G + WG
Sbjct: 60 LAWGDNAFGQLGDGTTTGSNTPLPVSLPAGTDATAVVAGDFHSLALTSAGTVLAWGRNDS 119
Query: 173 SQLGVPGLPVVQPCPV 188
QLG G V PV
Sbjct: 120 GQLG-DGTTVSSSTPV 134
>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1451
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 13/189 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++TWGR+ G+LG G + +P +V L V +VS G + L +G +
Sbjct: 419 SVWTWGRNT-NGQLGDGTTTERH------LPVRVPGLS-GVVSVSASGHHSFALRSDGTV 470
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG N+ ++G G P + L V+ + A+GG H +AL DG V++WGY G
Sbjct: 471 WGWGRNAQGQMGDGTTKDRASPARVEGLSSVKAL--ASGGSHMVALRTDGTVWTWGYNGA 528
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLG T +++ P+ + L+ VT +A G S A+ G ++ WG+ + QLG G
Sbjct: 529 GQLGDGTTTDRRAPVQVTGLSG--VTSVAAGAYFSLALRTDGTVWAWGDGFEGQLG-DGA 585
Query: 181 PVVQPCPVE 189
V + PV+
Sbjct: 586 GVQRASPVQ 594
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 12/175 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG + +G+LG+G +P +V+ L V +++ G +VL +G LW
Sbjct: 320 VFAWGLNS-QGQLGIG------TTADSPLPVRVRGLGA-VTSLAAGTQHAVVLRADGTLW 371
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG + +LG G P+++ L +V +A+G +HS+A DG V++WG +G
Sbjct: 372 TWGHGATGQLGHGSSERMLSPEVVTRLSNV--ASVASGSFHSVAALSDGSVWTWGRNTNG 429
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG T + +P+ + L+ V ++ G S A+ G ++ WG Q+G
Sbjct: 430 QLGDGTTTERHLPVRVPGLSG--VVSVSASGHHSFALRSDGTVWGWGRNAQGQMG 482
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD 90
P++V L V+AV+ G + + L +G +W WG+NS+ ++G G P + ++
Sbjct: 242 PTQVSQLQ-GVSAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIAR 300
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
+ + + G SL L DDG VF+WG GQLG T + +P+ + L VT +A
Sbjct: 301 AKAVAAQDAG--SLVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVRVRGLG--AVTSLAA 356
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + + G L+ WG+ QLG
Sbjct: 357 GTQHAVVLRADGTLWTWGHGATGQLG 382
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++P+++ L VA V+ G + +++L +G LW G NS+ +LG G P + L
Sbjct: 1245 AVPTRMLGLDGAVA-VAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTNRLSPFQVVEL 1303
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
VR ++ GGYHS+AL +DG V++WG+ G GQLG ++VP + L T I
Sbjct: 1304 DQVRTVRA--GGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVPAPVPGL-----TAI 1356
Query: 149 A-CGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
A G TS + + WG QLG
Sbjct: 1357 ASVGAGTSHTFAVGSETWAWGRNSHGQLGT 1386
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 80/164 (48%), Gaps = 9/164 (5%)
Query: 17 GPGRGPNEAGGLSIPSKVKALPVP----VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
G G G G +S +V A VP V +++ G ++ L + +W WG N+ ++G
Sbjct: 74 GNGSGQLGTGSVSF-QRVVAQQVPGLTDVTSIAAGDAHSLALRADRTVWTWGGNNAGQVG 132
Query: 73 RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
G V P+ +P L DV + +A G +HSLAL DG V++WG +GQLG +Q
Sbjct: 133 DGTNVDRPTPQKVPGLSDV--VAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGP 190
Query: 133 VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
P + L V +A G S AV G ++ WG QLG
Sbjct: 191 SPAQVVGLTG--VVALAAGFDFSLAVRSDGTVWAWGANGSGQLG 232
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG---DRVGGWKPKLL 85
+ P+KV+ L V AV GG +MVL +G +W WGAN + +LG G DR + K L
Sbjct: 840 AYPAKVEGL-WGVVAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRASPLEVKGL 898
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFV 145
I G H+L ++ DG V++WG G GQLG T + P+ + L+
Sbjct: 899 AG-----IATGVMGEAHALVVSQDGTVWAWGANGRGQLGDGTTTSSASPVRVAGLSAAM- 952
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
+++ G + S AV G ++ WG QLG G V + P
Sbjct: 953 -NVSVGQAYSLAVLPDGTVWSWGANDSGQLG-DGTNVARTTP 992
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 8/171 (4%)
Query: 19 GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG 78
GRG ++ G P++V L V A++ G F++ + +G +W WGAN + +LG G +
Sbjct: 182 GRGHSQPG--PSPAQVVGL-TGVVALAAGFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQ 238
Query: 79 GWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE 138
P + L V + G YH+LAL DG V++WG GQ+G ++ P+ +
Sbjct: 239 RLAPTQVSQLQGVSAVTA--GLYHALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVT 296
Query: 139 ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
++A +A + S + + G ++ WG QLG+ G P PV
Sbjct: 297 SIARAKA--VAAQDAGSLVLLDDGGVFAWGLNSQGQLGI-GTTADSPLPVR 344
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 32 SKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD----RVGGWKPKLLPN 87
++ +AL + V+ G ++ +T+ G +W WG N + +LG G RV + +P
Sbjct: 41 ARSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRV---VAQQVPG 97
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
L DV IA G HSLAL D V++WG GQ+G ++ P + L+D V
Sbjct: 98 LTDV--TSIAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLSD--VVA 153
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+A G S A+ G ++ WG+ QLG
Sbjct: 154 VAAGEFHSLALRADGTVWAWGSNFYGQLG 182
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WGR+ +G++G G + P++V+ L V A++ GG + L +G +W
Sbjct: 470 VWGWGRNA-QGQMGDGTTKDRAS------PARVEGLS-SVKALASGGSHMVALRTDGTVW 521
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N +LG G P + L V +A G Y SLAL DG V++WG G G
Sbjct: 522 TWGYNGAGQLGDGTTTDRRAPVQVTGLSGV--TSVAAGAYFSLALRTDGTVWAWGDGFEG 579
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG + P+ + L V +A G + AV + G ++ WG+ + Q+G
Sbjct: 580 QLGDGAGVQRASPVQVTGLTR--VVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMG 632
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 13/189 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG + GR LG G + A P +V L + VS G +++ + +G +W
Sbjct: 920 VWAWGAN---GRGQLGDGTTTSSAS----PVRVAGLSAAMN-VSVGQAYSLAVLPDGTVW 971
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WGAN + +LG G V PK + +L DV+ + G +H +A+ DG V+ WG G
Sbjct: 972 SWGANDSGQLGDGTNVARTTPKPVQDLADVKAVTA--GAHHVVAVRHDGTVWGWGANAFG 1029
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG-VPGL 180
Q+G + P+ +E L + T + G S A+ + WG+ + QLG
Sbjct: 1030 QVGDGTHFWRFRPVRVEGLLNAVET--SAGEQHSLALLGDERALSWGSHEYGQLGDAESG 1087
Query: 181 PVVQPCPVE 189
P ++P V+
Sbjct: 1088 PSLEPVGVK 1096
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 32 SKVKALPVPVA------AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
++ +A P+ VA AV+ T+ L +G +W WG N+ +LG G + L
Sbjct: 1141 TESRATPITVAGLGAMVAVAPAARHTLALRSDGTVWAWGDNTFGQLGDGSNT---RRTLP 1197
Query: 86 PNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF 144
+V + ++ IA G YHSLA+ +DG V++WGY GQLG + VP + L +
Sbjct: 1198 VQVVGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRMLGL--DG 1255
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+A G S + G L+ GN QLG
Sbjct: 1256 AVAVAGGEYHSLMLRFDGTLWATGNNSHGQLG 1287
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD 90
P + LP AA S G ++VL +G +W+WG NS +LG G P + L
Sbjct: 792 PVLARNLPCARAA-SAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGLWG 850
Query: 91 VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC 150
V + + GG S+ L DG V++WG G GQLG ++ P+ ++ LA +
Sbjct: 851 V--VAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRASPLEVKGLAG--IATGVM 906
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
G + + V++ G ++ WG QLG G PV
Sbjct: 907 GEAHALVVSQDGTVWAWGANGRGQLG-DGTTTSSASPVR 944
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 7/147 (4%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V GG+ ++ L E+G +W WG N +LG G P +P L I + G
Sbjct: 1306 VRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVPAPVPGLT--AIASVGAGT 1363
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
H+ A+ + ++WG HGQLG + ++ P +++ L V + GG S A
Sbjct: 1364 SHTFAVGSE--TWAWGRNSHGQLGTGDSSDRLEPTLVKGL--HGVKSVLAGGDFSVAQGA 1419
Query: 161 KGKLYMWGNAKDSQLGVPGLPVVQPCP 187
G WG LG+ GLP + P
Sbjct: 1420 DGSAMSWGTNVHGTLGI-GLPGQRTVP 1445
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 2 LYTWGRDEGEGRLGLGPG---RGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEG 58
++TWG + G G+LG G R P + GLS V +V+ G +F++ L +G
Sbjct: 520 VWTWGYN-GAGQLGDGTTTDRRAPVQVTGLS----------GVTSVAAGAYFSLALRTDG 568
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W WG +LG G V P + L R++++A G H LA+ DDG V++WG
Sbjct: 569 TVWAWGDGFEGQLGDGAGVQRASPVQVTGLT--RVVKLAAGAAHGLAVRDDGTVWAWGDN 626
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G ++ + + L V+ + G S A+ + G L WG Q G
Sbjct: 627 TEGQMGDGSWSDRFRAVQVYGLTG--VSSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDG 684
Query: 179 GL 180
G+
Sbjct: 685 GV 686
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP----VAAVSCGGFFTMVLTEE 57
++TWG + G+G+LG G ++ ++ PVP +A+V G T + E
Sbjct: 1325 VWTWGHN-GQGQLGDG-----------TVTTRRVPAPVPGLTAIASVGAGTSHTFAVGSE 1372
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
W WG NS+ +LG GD +P L+ L V+ + GG S+A DG SWG
Sbjct: 1373 --TWAWGRNSHGQLGTGDSSDRLEPTLVKGLHGVK--SVLAGGDFSVAQGADGSAMSWGT 1428
Query: 118 GGHGQLGHSFTQNQKVPMVI 137
HG LG + VP +
Sbjct: 1429 NVHGTLGIGLPGQRTVPGAV 1448
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 49 FFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII----QIANGGYHSL 104
+ + E+G L WG N +LG G GW LP V VR + +++ G HSL
Sbjct: 709 LHVLAVREDGMLLTWGYNRFGQLGLG--AAGWSS--LP--VQVRGLGQGRRLSAGRAHSL 762
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
+ DG V +WG GQLG T ++ P++ L + G S + G +
Sbjct: 763 LVRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNL--PCARAASAGRQHSLVLACDGTV 820
Query: 165 YMWGNAKDSQLGVPGLPV-VQPCPVE 189
+ WG QLG G+ P VE
Sbjct: 821 WSWGGNSQGQLGDGGVTSRAYPAKVE 846
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK-VPMVIEALADEFVTHIACGGS 153
++A G HSL +T G V++WG G GQLG Q+ V + L D VT IA G +
Sbjct: 52 KVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGLTD--VTSIAAGDA 109
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
S A+ ++ WG Q+G G V +P P
Sbjct: 110 HSLALRADRTVWTWGGNNAGQVG-DGTNVDRPTP 142
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP---KLLPN 87
P +V+ L + S G ++ L + + +WG++ +LG + +P KL +
Sbjct: 1042 PVRVEGL-LNAVETSAGEQHSLALLGDERALSWGSHEYGQLGDAESGPSLEPVGVKLPSS 1100
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
V V + ++ H+ AL DG V +WG GQLG T+++ P+ + L +
Sbjct: 1101 KVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGTTESRATPITVAGLG--AMVA 1158
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
+A + A+ G ++ WG+ QLG G + PV+
Sbjct: 1159 VAPAARHTLALRSDGTVWAWGDNTFGQLG-DGSNTRRTLPVQ 1199
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
+ ++G +W WG N+ ++G G ++ + L V + G YHS+AL DG +
Sbjct: 614 VRDDGTVWAWGDNTEGQMGDGSWSDRFRAVQVYGLTGVS--SVVGGLYHSMALAQDGTLR 671
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDS 173
+WG +GQ G + V + L+ + + AV E G L WG +
Sbjct: 672 AWGGNAYGQFGDGGVTPRVVAGAVPGLSG--IKLLGASYLHVLAVREDGMLLTWGYNRFG 729
Query: 174 QLGV 177
QLG+
Sbjct: 730 QLGL 733
>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 1205
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 68/136 (50%)
Query: 33 KVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR 92
KV+A PV V S G +M T +G LW WG N LG G G P ++ ++D
Sbjct: 246 KVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRD 305
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
I+ + G HS + G +++WG GG G+LGH VP +E V +ACG
Sbjct: 306 IVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGT 365
Query: 153 STSAAVTEKGKLYMWG 168
+ A+T KG ++ WG
Sbjct: 366 FHTLALTHKGTVFAWG 381
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 96/217 (44%), Gaps = 48/217 (22%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
LYTWG G GRLG G + G + +P KV+ VPV V+CG F T+ LT +G +
Sbjct: 325 LYTWGSG-GFGRLGHG------DQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTV 377
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVR--IIQIANGGYHSLALTDDGKVFSWGYG 118
+ WGA G G+ G + +L D+ ++ IA G YHS A+T G + WG G
Sbjct: 378 FAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVG 437
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEF---------------------------------- 144
G +LGH QNQ P + L +
Sbjct: 438 GSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQ 497
Query: 145 ----VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ + CG S + A+T G +++WG+ D QLG+
Sbjct: 498 SSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGL 534
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 31 PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP------- 82
PS+V+ +A +SCG T+ L++EG L+ WG S LG+GD + P
Sbjct: 172 PSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGS 231
Query: 83 -----KLLPNL------VD-VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
K N+ D V + + G HS+A T DG +++WG+GG+G+LG +
Sbjct: 232 EAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRG 291
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
P V++ + D + + G S SA + +G LY WG+ +LG
Sbjct: 292 SLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLG 337
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 86/177 (48%), Gaps = 8/177 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+TWG G GRLGLG RG LS L + V+ G + + +G L+
Sbjct: 273 LWTWGHG-GNGRLGLGHNRGS-----LSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLY 326
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG+ LG GD+ P+ + V ++Q+A G +H+LALT G VF+WG G
Sbjct: 327 TWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLAL 386
Query: 122 QLGHSFTQNQKVPMVIEALAD--EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + + V + L+D V +IA G SAAVT G L +WG S+LG
Sbjct: 387 GFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLG 443
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIAN 98
+ ++ CG T+ LT G +W WG+N + +LG G+ V ++P L I +IA
Sbjct: 502 LQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKL-ECFSTPIRRIAC 560
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H LA+ G VF+WG +GQLG + P + AL + CG SA +
Sbjct: 561 GSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQ--AVDVFCGDDYSACI 618
Query: 159 --------------TEKGKLYMWGNAKDSQLGV 177
TE G L+ WG A+ +LG+
Sbjct: 619 TSLGGAQSVSGETGTEFGDLWAWGAAESGKLGL 651
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 84/201 (41%), Gaps = 34/201 (16%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVS-------------CG 47
+L+ WG E G+LGLG +G + P KV VPV A S C
Sbjct: 637 DLWAWGAAE-SGKLGLGEDVA---SGSILTPQKV-VFSVPVCACSLDSLEMQAYKRVFCV 691
Query: 48 GF--------FTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG 99
F ++ +T +G+ + WGA LG G + P VR+ +A G
Sbjct: 692 SFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAG 751
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE----FVTHIACGGSTS 155
HSLAL+ DG ++ WG + T N P + L + V I+ S
Sbjct: 752 ACHSLALSMDGDLWFWGR----REDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHS 807
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
AVTE G+++ WG+ K Q G
Sbjct: 808 LAVTEAGEVFAWGDNKLYQTG 828
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 39/210 (18%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG ++ +G+LGLG ++ P K++ P+ ++CG + + + G ++
Sbjct: 521 VWVWGSND-DGQLGLGEDVEEDQYE----PVKLECFSTPIRRIACGSKHCLAVAQYGDVF 575
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLV---------DVRIIQIANGGYHSLA---LTDD 109
WGAN N +LG G ++P + L D + GG S++ T+
Sbjct: 576 AWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEF 635
Query: 110 GKVFSWGYGGHGQLGH-------SFTQNQKVPMVI-------EALADEFVTHIAC----- 150
G +++WG G+LG S QKV + ++L + + C
Sbjct: 636 GDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSP 695
Query: 151 ---GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G S S A+T +G+ Y WG +LG+
Sbjct: 696 LCSGTSHSLAITAQGECYAWGAGYYGRLGI 725
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 46/180 (25%)
Query: 44 VSCGGFFTMVLTEE-----GQLWNWGANSNYELG----RGDRVGGW-------------- 80
VSCG + VL + G+++ +G + LG + D V G+
Sbjct: 107 VSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPS 166
Query: 81 ----KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMV 136
KP + +I +I+ G H+LAL+D+G +++WG G +G LG T + P+
Sbjct: 167 WFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVR 226
Query: 137 I------------------EALADE-FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ + AD VT + G S A T G L+ WG+ + +LG+
Sbjct: 227 VYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGL 286
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 37/173 (21%)
Query: 38 PVPVAAVSCGGFFTMVLTEEG---QLWNWGANSNYELGRG----DRVGGWKPKLLPNLVD 90
P V V+ G + T+V+ +G QL+ WG N + LG G +RV P L+P
Sbjct: 45 PASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERV---FPGLVPFFSK 101
Query: 91 VRIIQIANGGYHSLALTDD-----GKVFSWGYGGHGQLGHSFTQNQKV------------ 133
+ +++ G +S L GKV+++G G G+LG+ + V
Sbjct: 102 MGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQ 161
Query: 134 ----------PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
P + + I+CG + A++++G LY WG LG
Sbjct: 162 EDGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLG 214
>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
Length = 1048
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 13/191 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
+ +WG + +G+LGLG E L P+ + +L P++ + G + + VL+ G L
Sbjct: 153 ILSWGSN-TQGQLGLGSS----EIEFLE-PTIIASLNAFPISQICAGAYHSGVLSPSGTL 206
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N+ +LG G+ P+L+ L ++ +A G HS+ T +G VFSWG+GG
Sbjct: 207 FTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGG 266
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH+ N P I L V I CG + ++T+K KL +G ++QLG
Sbjct: 267 NGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHN 326
Query: 180 -----LPVVQP 185
LP+ P
Sbjct: 327 DTSARLPITIP 337
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANG 99
V V+CG + LTEEG + +WG+N+ +LG G + +P ++ +L I QI G
Sbjct: 134 VVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAG 193
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAV 158
YHS L+ G +F+WG GQLGH + + Q P +++ L + V +A G S
Sbjct: 194 AYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCR 253
Query: 159 TEKGKLYMWGNAKDSQLGVPGLP-VVQP 185
T G ++ WG+ + QLG + V QP
Sbjct: 254 TRNGGVFSWGHGGNGQLGHNSMANVTQP 281
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYEL-GRGDRVGGWKPKLLPNLVDVRIIQIANG 99
+ V+ G FF++ + E G L+ WG + N EL + D + +PKLL ++ ++Q+A G
Sbjct: 83 IFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDSLH--EPKLLDKIMHWSVVQVACG 140
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAV 158
H +ALT++G + SWG GQLG ++ + + P +I +L ++ I G S +
Sbjct: 141 AQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVL 200
Query: 159 TEKGKLYMWGNAKDSQLG 176
+ G L+ WG QLG
Sbjct: 201 SPSGTLFTWGKNNWGQLG 218
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG+++ G+LGLG +E +S PS + A V +++ G T+ LT +++
Sbjct: 1 MYGWGKND-YGQLGLG-----SENMLISCPSPIDA-NQSVISIASGLRHTVYLTSTRKVY 53
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+ G+N +LG+ + +P L+ I +A G + S+A+ + G +F WG +G
Sbjct: 54 SCGSNEFGQLGQ--QKSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNG 111
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+L + P +++ + V +ACG A+TE+G + WG+ QLG+
Sbjct: 112 ELMCK-QDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGL 166
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
L+TWG++ G+LG G N S P VK L V V+ G ++ T G +
Sbjct: 206 LFTWGKNNW-GQLGHG-----NSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGV 259
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG N +LG +PK + L+ + QI G H+++LTD K+ +G +
Sbjct: 260 FSWGHGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSN 319
Query: 121 GQLGHSFTQNQKVPMV--IEALADEFVTHIACGGSTS 155
QLG + ++P+ I D ++ IA GG S
Sbjct: 320 NQLGTHNDTSARLPITIPISLTDDRQLSCIAAGGDQS 356
>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
cuniculus]
Length = 882
Score = 89.0 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 103/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG D EG++GL + +P +V + P++ +SCG + + +T +G+L
Sbjct: 160 ELFMWG-DNSEGQIGL------KNVTNVCVPHQV-TIGKPISWISCGYYHSAFVTMDGEL 211
Query: 61 WNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G N +LG + + P+L+ + + ++IQ+A GG H++ LT+ V+++G G
Sbjct: 212 YTFGECENGKLGLPEELLINHKTPQLVTRIPE-KVIQVACGGGHTVVLTET-IVYTFGLG 269
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P IE + D ++ I+CG + +A +TE G++Y +G+ + +LG+
Sbjct: 270 QFGQLGLGTFIFETSEPKAIEYIKDHKISSISCGENHTALITELGRMYTFGDGRYGKLGL 329
Score = 85.5 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 64/182 (35%), Positives = 97/182 (53%), Gaps = 15/182 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG N+ P+ VKAL P V V+CG T+V TEEG
Sbjct: 55 KLYMFGSNNW-GQLGLGSKTTINK------PTCVKALKPEKVKYVACGRNHTLVSTEEGN 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLP---NLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
++ G N++ +LG GD G + P +I Q++ G S ALT++G++F WG
Sbjct: 108 VYATGGNNDGQLGLGDTEG--RNTFYPISFFTSQHKIKQLSAGSNTSAALTENGELFMWG 165
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQ+G N VP + + ++ I+CG SA VT G+LY +G ++ +LG
Sbjct: 166 DNSEGQIGLKNVTNVCVPH--QVTIGKPISWISCGYYHSAFVTMDGELYTFGECENGKLG 223
Query: 177 VP 178
+P
Sbjct: 224 LP 225
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 15 GLGPGRGPNEAGGLS-----IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNY 69
GL PG G G + IPSK +SCG T V+T +L+ +G+N+
Sbjct: 6 GLVPGSGAVFTFGKTKFAENIPSKFWFKNDVPTYLSCGDEHTAVVTGNNKLYMFGSNNWG 65
Query: 70 ELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ 129
+LG G + KP + L ++ +A G H+L T++G V++ G GQLG T+
Sbjct: 66 QLGLGSKTTINKPTCVKALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDGQLGLGDTE 125
Query: 130 NQKVPMVIEALADEF-VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ I + + ++ G +TSAA+TE G+L+MWG+ + Q+G+
Sbjct: 126 GRNTFYPISFFTSQHKIKQLSAGSNTSAALTENGELFMWGDNSEGQIGL 174
>gi|260792916|ref|XP_002591460.1| hypothetical protein BRAFLDRAFT_205444 [Branchiostoma floridae]
gi|229276665|gb|EEN47471.1| hypothetical protein BRAFLDRAFT_205444 [Branchiostoma floridae]
Length = 689
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 18/188 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WGR + GRLGLG + + IPS P V +V CG +++LT + +L
Sbjct: 471 EVFSWGRGD-HGRLGLGNRESYSTPQPVPIPS-----PHLVKSVHCGVDCSILLTTDNRL 524
Query: 61 WNWGANSNYELG------------RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G+N + +LG + D + + P L+ RI +A G HS A+T+
Sbjct: 525 LGCGSNRHNKLGLDILPADDSPSQQIDEMCVFVPASSAPLLTTRIAAVALGTSHSAAITE 584
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G+ +++G QLG+ + P ++ AL D ++ + CG + + A+T +G++Y WG
Sbjct: 585 SGQCYTFGANNFNQLGYQKDSKDRRPQLVPALEDVCISMVECGDTFTVAITTEGEVYTWG 644
Query: 169 NAKDSQLG 176
+LG
Sbjct: 645 KGSRGRLG 652
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V + VSCG FT LT+ G L +G+ +N LG G + K++ L+ + ++
Sbjct: 399 VTIKQVSCGDLFTACLTDRGILMTFGSGTNGCLGHGQTNDVQQAKIVEALLGFEVTLVSC 458
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H +A+T++ +VFSWG G HG+LG ++ P + + V + CG S +
Sbjct: 459 GATHVMAVTNEHEVFSWGRGDHGRLGLGNRESYSTPQPVPIPSPHLVKSVHCGVDCSILL 518
Query: 159 TEKGKLYMWGNAKDSQLGVPGLP 181
T +L G+ + ++LG+ LP
Sbjct: 519 TTDNRLLGCGSNRHNKLGLDILP 541
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 26 GGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWG----ANSNYELGRGDRVG 78
GG++ P K++ LP V VS G +T G+L W A G D
Sbjct: 327 GGITQPVKLQ-LPHSDTQVMQVSTGRTQKAGVTRNGRLIMWEVPTVATDAAMPGATDHAA 385
Query: 79 -GWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
+ P+ L V I Q++ G + LTD G + ++G G +G LGH T + + ++
Sbjct: 386 LQFIPRFLEGQSGVTIKQVSCGDLFTACLTDRGILMTFGSGTNGCLGHGQTNDVQQAKIV 445
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV---PGLPVVQPCPV 188
EAL VT ++CG + AVT + +++ WG +LG+ QP P+
Sbjct: 446 EALLGFEVTLVSCGATHVMAVTNEHEVFSWGRGDHGRLGLGNRESYSTPQPVPI 499
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 31 PSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P V AL V ++ V CG FT+ +T EG+++ WG S LGR + PK +P L+
Sbjct: 610 PQLVPALEDVCISMVECGDTFTVAITTEGEVYTWGKGSRGRLGRREE-NTKIPKPVP-LL 667
Query: 90 DVRIIQI 96
D QI
Sbjct: 668 DSEPFQI 674
>gi|195168454|ref|XP_002025046.1| GL26838 [Drosophila persimilis]
gi|194108491|gb|EDW30534.1| GL26838 [Drosophila persimilis]
Length = 828
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 11/171 (6%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWN 62
Y+WG E + RLG G + ++P+K+ +L V AV CG ++ +T G L+
Sbjct: 216 YSWGNGE-DHRLGHG------DTHARAVPTKINSLDRCVKAVFCGCSYSAAITCSGNLYT 268
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGGH 120
WG + LG G+ P ++ L + II +A +G HSL LT +G V++WG +
Sbjct: 269 WGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADY 328
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
G+LG+ P+++E+L V + G S A+T G+LY WG A
Sbjct: 329 GKLGNGNLNGSMSPVLVESLPK--VQRVFAGAQFSMALTTDGQLYSWGKAS 377
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 21 GPNEAGGLSIPSKVKALPV-----PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD 75
G N LS S +LP+ V + C ++L+ EG+L+NW
Sbjct: 127 GFNAEPALSWSSDPSSLPLLNCKFQVQQIVCSESIVLILSGEGKLYNWRMFKPET----- 181
Query: 76 RVGGWKPKLLPNLVDVRIIQIANG--GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV 133
+P+LL + I+ IA+ G H +A+ + +SWG G +LGH T + V
Sbjct: 182 -----EPQLLEEIAHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAV 236
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
P I +L D V + CG S SAA+T G LY WG ++LG
Sbjct: 237 PTKINSL-DRCVKAVFCGCSYSAAITCSGNLYTWGRGTYARLG 278
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+Y WG D G+LG G N G +S P V++LP V V G F+M LT +GQL
Sbjct: 319 HVYAWG-DADYGKLGNG-----NLNGSMS-PVLVESLP-KVQRVFAGAQFSMALTTDGQL 370
Query: 61 WNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++WG S +R W P+L+ L RI+ +A G H LAL+ G+VF WG
Sbjct: 371 YSWGKASCLGHQLVERSAQWCSIPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWGRN 430
Query: 119 GHGQLGHSFTQNQ---KVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
Q+ S ++ +VP+++ AL + +AC S S T+ +
Sbjct: 431 DSQQICPSSVSSEPLLRVPILV-ALPTLPASGVACTASQSLIWTQSSR 477
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
A C G M + ++WG ++ LG GD P + N +D + + G +
Sbjct: 198 ASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKI-NSLDRCVKAVFCGCSY 256
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTE 160
S A+T G +++WG G + +LGH + +Q +P V+ AL + + +A G + S +T
Sbjct: 257 SAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTS 316
Query: 161 KGKLYMWGNAKDSQLG 176
+G +Y WG+A +LG
Sbjct: 317 EGHVYAWGDADYGKLG 332
>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
Length = 1019
Score = 89.0 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 105/179 (58%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL PN + +P +V + P+A +SCG + + +T EG+L+
Sbjct: 206 LFMWG-DNSEGQIGLK--NVPN----VCVPHQV-TVGKPIAWISCGYYHSAFVTMEGELY 257
Query: 62 NWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G +LG R + P+L+P + + ++IQ+A GG H++ LT+ V+++G G
Sbjct: 258 TFGETECGKLGLPRQLLMNHKVPQLVPGIPE-KVIQVACGGGHTVVLTEKA-VYTFGLGQ 315
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P ++E + D+ + +I+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 316 FGQLGLGTFIFETAEPKILEPIKDQKIIYISCGENHTALITDVGLMYTFGDGRHGKLGL 374
Score = 79.0 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 13/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+VLTEEG+
Sbjct: 100 KLYMFGSNNW-GQLGLG------SRSTVSKPTCVKALKPEKVKFAACGRNHTLVLTEEGK 152
Query: 60 LWNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ G N+ +LG GD + P ++ Q++ G S ALT DG +F WG
Sbjct: 153 VYAAGGNNEGQLGLGDTEDRNTFHPICFFT-SQHQLKQLSAGSNTSAALTVDGNLFMWGD 211
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G N VP + + + I+CG SA VT +G+LY +G + +LG+
Sbjct: 212 NSEGQIGLKNVPNVCVPH--QVTVGKPIAWISCGYYHSAFVTMEGELYTFGETECGKLGL 269
Query: 178 P 178
P
Sbjct: 270 P 270
Score = 76.3 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 51/159 (32%), Positives = 85/159 (53%), Gaps = 7/159 (4%)
Query: 29 SIPSKV---KALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+IPSK +P +A CG T ++T +L+ +G+N+ +LG G R KP +
Sbjct: 70 NIPSKFWFKNDIPTYLA---CGDEHTAIITGNNKLYMFGSNNWGQLGLGSRSTVSKPTCV 126
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF- 144
L ++ A G H+L LT++GKV++ G GQLG T+++ I +
Sbjct: 127 KALKPEKVKFAACGRNHTLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPICFFTSQHQ 186
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVV 183
+ ++ G +TSAA+T G L+MWG+ + Q+G+ +P V
Sbjct: 187 LKQLSAGSNTSAALTVDGNLFMWGDNSEGQIGLKNVPNV 225
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 11/156 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYT+G E G+LGL N +P V +P V V+CGG T+VLTE+ +
Sbjct: 255 ELYTFGETEC-GKLGLPRQLLMNH----KVPQLVPGIPEKVIQVACGGGHTVVLTEKA-V 308
Query: 61 WNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G +LG G + +PK+L + D +II I+ G H+ +TD G ++++G G
Sbjct: 309 YTFGLGQFGQLGLGTFIFETAEPKILEPIKDQKIIYISCGENHTALITDVGLMYTFGDGR 368
Query: 120 HGQLG---HSFTQNQKVPMVIEALADEFVTHIACGG 152
HG+LG +FT NQ +P + V +ACGG
Sbjct: 369 HGKLGLGMENFT-NQFIPTLCSNFLRFMVELVACGG 403
>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1457
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 81/148 (54%), Gaps = 5/148 (3%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+ P V+ L V AVS G + ++ L +G +W WGAN +LG G + P + L
Sbjct: 1147 AAPVVVRGL-TGVVAVSTGAWHSLALRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVAGL 1205
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+++ I GGYH+LA+ DG V++WGY GQLG +++ +P+ +E L++ VT +
Sbjct: 1206 Q--KVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEGLSN--VTSV 1261
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A G S A+ G L WGN QLG
Sbjct: 1262 AGGDHHSLALLADGSLGAWGNNAAGQLG 1289
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 37 LPVP--VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII 94
LP P + +V G ++ L E G +W WG NS+ +LG G P + L DV +
Sbjct: 96 LPSPRDIVSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGLTDV--V 153
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGST 154
+A G +HSLAL DG V++WG HGQLG T+ P + L E V +A G
Sbjct: 154 AVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGL--EGVVALAAGFDF 211
Query: 155 SAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
+ AV + G + WG QLG G + PVE
Sbjct: 212 TLAVMDDGTVRAWGANSSGQLG-DGTFTQRLAPVE 245
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WGR+ G+LG G R P V L V AV+ GG TM L +G +W
Sbjct: 471 VWAWGRNA-AGQLGDGSTRDRAR------PVAVSGL-TSVVAVATGGSHTMALRGDGTVW 522
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N+ +LG G V P + L V + +A G Y S+AL DG V++WG G G
Sbjct: 523 AWGYNALGQLGDGTTVDRLTPVRVARLDSV--VAVAAGTYFSMALRGDGTVWTWGEGFEG 580
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
Q+G + P+ + L + VT +A G + + AV G ++ WG+ + QLG
Sbjct: 581 QVGDGGGVQRLFPVQVAGLTN--VTRVAAGSAHALAVRGDGTVWAWGDNGEGQLG 633
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIAN 98
++AV+ G + + L ++G +W WGANS+ +LG G W + +P V R+ +A+
Sbjct: 252 ISAVTAGTYHAVALGKDGGVWTWGANSSGQLGD----GAWSDRAVPARVPGLERVKAVAS 307
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
SLAL + G V +WG G GQLG S T ++ P + L V + G + A+
Sbjct: 308 MDASSLALLEAGSVLAWGANGSGQLGDSGTDDRATPGEVPGL--RSVAAVVGGAQHALAL 365
Query: 159 TEKGKLYMWGNAKDSQLGVPGLPV-VQPCPV 188
G L+ WG QLG G V P P+
Sbjct: 366 RGDGTLWAWGGGLAGQLGHGGSERHVVPAPL 396
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+++WGR+ G+LG G + A +V+ L + V+ G ++ + +G +W
Sbjct: 421 VWSWGRNT-YGQLGDGTTAERHAA------VRVEGLS-GIRGVAASGHHSLAVGADGTVW 472
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N+ +LG G +P + L V + +A GG H++AL DG V++WGY G
Sbjct: 473 AWGRNAAGQLGDGSTRDRARPVAVSGLTSV--VAVATGGSHTMALRGDGTVWAWGYNALG 530
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
QLG T ++ P+ + L + V +A G S A+ G ++ WG
Sbjct: 531 QLGDGTTVDRLTPVRVARL--DSVVAVAAGTYFSMALRGDGTVWTWG 575
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P +V L V AV+ G F ++ L +G +W WG N + +LGRG G P+ +P L
Sbjct: 142 TPMQVAGL-TDVVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLE 200
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
V + +A G +LA+ DDG V +WG GQLG + P+ + ++ ++ +
Sbjct: 201 GV--VALAAGFDFTLAVMDDGTVRAWGANSSGQLGDGTFTQRLAPVEVAHISG--ISAVT 256
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + A+ + G ++ WG QLG
Sbjct: 257 AGTYHAVALGKDGGVWTWGANSSGQLG 283
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+ P +V L VAAV G + L +G LW WG +LG G P L L
Sbjct: 341 ATPGEVPGLR-SVAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPLLRL 399
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
DV +A G +HSLA DG V+SWG +GQLG T + + +E L+ + +
Sbjct: 400 ADV--ASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHAAVRVEGLSG--IRGV 455
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A G S AV G ++ WG QLG
Sbjct: 456 AASGHHSLAVGADGTVWAWGRNAAGQLG 483
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG + G G+LG G P+ P +VK L VA+VS G F++ + ++G W
Sbjct: 921 LWAWGAN-GSGQLGEGSTT-PSP-----TPVRVKGLE-GVASVSAGRAFSLAVRQDGTAW 972
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WGAN + +LG G PK + ++ VR ++ G +H +AL +DG V++WG G
Sbjct: 973 AWGANPSGQLGDGTNHSQRVPKQVTSVKRVR--AMSAGAHHVVALGEDGAVWTWGDNTLG 1030
Query: 122 QLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG + + P + L D V +A G S AV G + WG+ + QLG
Sbjct: 1031 QLGDGTSAPTWMWPRQVPELRD--VEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLG 1084
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIAN 98
V V G T+ L +G +W WG N++ +LG GD + P+ +P L V I
Sbjct: 1308 VVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSGV--TAIGA 1365
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G HS A+ G V++WG HGQLG N+ P+ ++ LA+ V+ ++ G S A+
Sbjct: 1366 GARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEPLRVKELAE--VSVVSGGADFSLAM 1423
Query: 159 TEKGKLYMWGNAKDSQLGV 177
G + WG++ LG+
Sbjct: 1424 QRDGTVSSWGSSLHGALGL 1442
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 24 EAGGLSIPSKVKALPVPVAA----VSCGGFFTMVLTEEGQLWNWGANSNYEL-GRGDRVG 78
E L P + + V A ++ G ++ ++ G +W WG N++ +L G +
Sbjct: 30 ELAALEQPRAARTQRITVTAPPMRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQ 89
Query: 79 GWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE 138
P LP+ D I+ + +G HSLAL + G V++WG GQLG T ++ PM +
Sbjct: 90 RLAPAPLPSPRD--IVSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVA 147
Query: 139 ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV----PGLPVVQPCP 187
L D V +A G S A+ G ++ WG QLG PGL +P P
Sbjct: 148 GLTD--VVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEPGL-TPEPVP 197
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 14/176 (7%)
Query: 16 LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD 75
LG G + AG P V+ +P V +V+ G ++ L +G +W WGAN +LG G
Sbjct: 782 LGDGTTTHRAG----PVLVRGVPC-VRSVASGVLHSLALACDGSVWAWGANGRGQLGDGT 836
Query: 76 RVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV 133
+++P VD + +A GG SLAL DG ++WG HGQLG T ++ V
Sbjct: 837 TA----SRVIPARVDGLQGAVAVAAGGDASLALLADGTAWAWGANAHGQLGDGSTSDRAV 892
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
P ++ ++ + +A G + A E G L+ WG QLG G P PV
Sbjct: 893 PGQLKLPSN--IMSVALGETHGLAAGEDGALWAWGANGSGQLG-EGSTTPSPTPVR 945
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 87/179 (48%), Gaps = 18/179 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++ WG + G G+LG G IP++V L VA + G ++ L +G
Sbjct: 820 SVWAWGAN-GRGQLGDG------TTASRVIPARVDGLQGAVAVAAGG-DASLALLADGTA 871
Query: 61 WNWGANSNYELGRG---DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
W WGAN++ +LG G DR + KL N I+ +A G H LA +DG +++WG
Sbjct: 872 WAWGANAHGQLGDGSTSDRAVPGQLKLPSN-----IMSVALGETHGLAAGEDGALWAWGA 926
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G GQLG T P+ ++ L E V ++ G + S AV + G + WG QLG
Sbjct: 927 NGSGQLGEGSTTPSPTPVRVKGL--EGVASVSAGRAFSLAVRQDGTAWAWGANPSGQLG 983
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 5/148 (3%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++P++V L V AV+ ++ L E G + WGAN + +LG P +P L
Sbjct: 291 AVPARVPGLE-RVKAVASMDASSLALLEAGSVLAWGANGSGQLGDSGTDDRATPGEVPGL 349
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
V + G H+LAL DG +++WG G GQLGH ++ VP + LAD V +
Sbjct: 350 RSV--AAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPLLRLAD--VASM 405
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A G S A G ++ WG QLG
Sbjct: 406 AAGSFHSLAALGDGTVWSWGRNTYGQLG 433
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 12/175 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L WG + G+LGLG AG S P +V+ L V ++ G T+++ +G +
Sbjct: 721 LRGWGYNR-FGQLGLG------AAGWSSRPVQVRGLG-RVDRLAVGRAHTLMVRPDGAVL 772
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N++ +LG G P L+ + VR +A+G HSLAL DG V++WG G G
Sbjct: 773 AWGENASGQLGDGTTTHRAGPVLVRGVPCVR--SVASGVLHSLALACDGSVWAWGANGRG 830
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG T ++ +P ++ L + +A GG S A+ G + WG QLG
Sbjct: 831 QLGDGTTASRVIPARVDGL--QGAVAVAAGGDASLALLADGTAWAWGANAHGQLG 883
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
+P +V+ L V +V+ G ++ L +G L WG N+ +LG G + ++ V
Sbjct: 1248 LPVRVEGLS-NVTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTTRYS-RVWVKGV 1305
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALADEFVTH 147
D ++++ G H+LAL DG V++WG H QL G T+ + VP + L+ VT
Sbjct: 1306 D-GVVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSG--VTA 1362
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
I G S AV KG ++ WG QLG+
Sbjct: 1363 IGAGARHSFAVGPKGTVWAWGRNSHGQLGL 1392
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P +V L V V+ G + + +G +W WG N +LG G ++P +P L
Sbjct: 592 FPVQVAGL-TNVTRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQVPGLT 650
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
I ++ G HS+AL DG V +WGY G+GQLG ++ P V+ L H +
Sbjct: 651 G--ITAVSGGRSHSMALHGDGSVRAWGYNGYGQLGDGTFTSRVRPAVVPGLTGIQALHPS 708
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
A+ G L WG + QLG+
Sbjct: 709 H--LHVLALHADGTLRGWGYNRFGQLGL 734
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 83/214 (38%), Gaps = 58/214 (27%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNL 88
+P +V ++ V A+S G + L E+G +W WG N+ +LG G W P+ +P L
Sbjct: 992 VPKQVTSVK-RVRAMSAGAHHVVALGEDGAVWTWGDNTLGQLGDGTSAPTWMWPRQVPEL 1050
Query: 89 VDVRII-------------------------QIANG------------------------ 99
DV + Q+ +G
Sbjct: 1051 RDVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRT 1110
Query: 100 ----GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTS 155
H++AL DG V +WG HGQLG T+ + P+V+ L V ++ G S
Sbjct: 1111 VRAWAQHAVALMADGTVQAWGDNAHGQLGDGTTERRAAPVVVRGLTG--VVAVSTGAWHS 1168
Query: 156 AAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
A+ G ++ WG QLG G + + PV
Sbjct: 1169 LALRSDGTVWAWGANGFGQLG-DGTTLSRTTPVR 1201
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 29 SIPSKVKALPVP----VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKL 84
+ S+V+ VP + A+ + L +G L WG N +LG G GW +
Sbjct: 686 TFTSRVRPAVVPGLTGIQALHPSHLHVLALHADGTLRGWGYNRFGQLGLG--AAGWSSRP 743
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF 144
+ R+ ++A G H+L + DG V +WG GQLG T ++ P+++ +
Sbjct: 744 VQVRGLGRVDRLAVGRAHTLMVRPDGAVLAWGENASGQLGDGTTTHRAGPVLVRGV--PC 801
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V +A G S A+ G ++ WG QLG
Sbjct: 802 VRSVASGVLHSLALACDGSVWAWGANGRGQLG 833
>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 2003
Score = 89.0 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 20/195 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-------PVPVAAVSCGGFFTMV 53
+L+ +G +E G+LGL + L IP++V P V + CG +++
Sbjct: 1320 DLFAFGSNE-HGQLGLN-----DLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVL 1373
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
T G ++++GAN+ +LG G PKL+ L I +I G YH++ TD V+
Sbjct: 1374 RTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVY 1433
Query: 114 SWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK-------GKLYM 166
WG G H LG +N+ VP ++E ++ V + CG +A +T+ G +Y+
Sbjct: 1434 CWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYI 1493
Query: 167 WGNAKDSQLGVPGLP 181
G+++ +LG+ G P
Sbjct: 1494 CGSSEHGKLGIGGDP 1508
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGG 100
+VSCG V+T +G+L+ WG N++ +LG G G + P + +L I+ ++ GG
Sbjct: 1198 SVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGG 1257
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
H++ + ++SWG G +GQLGH + +P IE A + ++ IA G + +
Sbjct: 1258 EHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHTLVLRS 1317
Query: 161 KGKLYMWGNAKDSQLGVPGLPVVQPCP 187
G L+ +G+ + QLG+ L P P
Sbjct: 1318 GGDLFAFGSNEHGQLGLNDLKHHLPIP 1344
Score = 82.0 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 58/184 (31%), Positives = 87/184 (47%), Gaps = 13/184 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+TWG + G+LG G G ++ S P +V++L P+ +S GG T+V+
Sbjct: 1214 ELFTWGNNT-SGQLGHGLAAGKHQ----STPMRVESLKQTPIMMMSLGGEHTVVIDRSFH 1268
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG +LG G PK + +I IA G +H+L L G +F++G
Sbjct: 1269 IYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAFGSNE 1328
Query: 120 HGQLG-HSFTQNQKVPMVI------EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
HGQLG + + +P + A VT I CG S S T G +Y +G
Sbjct: 1329 HGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAK 1388
Query: 173 SQLG 176
QLG
Sbjct: 1389 GQLG 1392
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 24/191 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPG---RGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
++Y++G + +G+LG G R P GL + + ++CG + T+V T+
Sbjct: 1379 DVYSFGAN-AKGQLGHGSTESCRYPKLIQGLKGKN--------IKRITCGPYHTVVTTDL 1429
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD-------DG 110
++ WG + LG G PKL+ V+ R+ ++ G YH+ LT G
Sbjct: 1430 DSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGG 1489
Query: 111 KVFSWGYGGHGQLG-----HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
V+ G HG+LG S + ++ P +I ++ V +A G +A +T G LY
Sbjct: 1490 NVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITSNGALY 1549
Query: 166 MWGNAKDSQLG 176
MWG Q+G
Sbjct: 1550 MWGAGTHGQIG 1560
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 31/186 (16%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEE--- 57
+Y WG+ E + LG G NE +P V+ + V V CG + T LT+
Sbjct: 1432 VYCWGQGE---HMCLGTGSNKNEL----VPKLVELFVNKRVERVVCGLYHTATLTQPMGD 1484
Query: 58 ----GQLWNWGANSNYELG-----RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G ++ G++ + +LG R + P ++P++ ++ +A+G + +T
Sbjct: 1485 SNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITS 1544
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVI---------EALADEFVTHIACGGSTSAAVT 159
+G ++ WG G HGQ+G+ Q+ +P + + + DE + I S+S +T
Sbjct: 1545 NGALYMWGAGTHGQIGNGKNQDTWIPTRVSLSSEKNQNQFIVDESGSTITL--SSSMLLT 1602
Query: 160 EKGKLY 165
EK Y
Sbjct: 1603 EKNNRY 1608
>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
Length = 1345
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 81/153 (52%), Gaps = 4/153 (2%)
Query: 27 GLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP 86
G+++P+ K+L V CG T V+ G + G S LG G+ + +
Sbjct: 507 GVNVPTVTKSL-ASAQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPIS 565
Query: 87 NLVDVRIIQIANG---GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
L +IQIA HSLALTD G+VFSWG G +G+LGH + Q+ P IEAL E
Sbjct: 566 ALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGE 625
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V ++ACG SA VT GKL+ +GN +LG
Sbjct: 626 EVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLG 658
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG+G ++ LS S ++ V A S G ++ LT+ G++++WG +
Sbjct: 548 GRLGMG---NSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGK 604
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++ +A G HS +T DGK+F++G G +G+LGH + N
Sbjct: 605 LGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSAN 664
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGK-LYMWGNAKDSQLGV 177
+K P + AL + +ACG + + ++ G ++ +G+ +LG+
Sbjct: 665 KKTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGL 712
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLG G + P +V AL + V+CG T+VL+ +G
Sbjct: 645 KLFTFGNGD-YGRLGHG------NSANKKTPERVTALEKHAIGQVACGLNHTLVLSADGN 697
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W +G +LG G P+ + L + +I G S+ LT+DG+VFS+G
Sbjct: 698 TVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQE 757
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ + P I+ALA F+ + G A+T G+++ WGN D QLG+
Sbjct: 758 RLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGL 816
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + P + L + + CG F++VLT +G++++
Sbjct: 700 WAFGDGDYGKLGLG------SCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFS 753
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G G G KP+ + L I + G H LALT G+V+ WG GQ
Sbjct: 754 FGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQ 813
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG + Q+ P VI L + + I+ G + SAA T
Sbjct: 814 LGLGHSNAQREPCVIPDLKGKNIRQISAGRNHSAAWT 850
>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
Length = 1038
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 20/200 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-----VPVAAVSCGGFFTMVLT 55
+LY +G G+G+LG ++ + P V P V V A++ G T+ L
Sbjct: 26 QLYAFGYG-GDGQLGNRGFLNGDDGNIVKTPQVVVGAPTSHDGVSVRAIATGERHTLFLA 84
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD--VRIIQIANGGYHSLALTDDGKVF 113
++G++W+ G+N N ELGRG G + P L+ V I+QIA G H++A+ DDG++F
Sbjct: 85 DDGKVWSCGSNENGELGRGGCQEG-SFTIYPVLLSGGVNIVQIAAGRAHNMAVADDGRLF 143
Query: 114 SWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+WG HGQL S + +P + +L + +ACG + A+ E G++++WG D
Sbjct: 144 AWGSNSHGQLALPSNITSTDIPKRVVSLTE--TVQVACGTDHTIAIVESGRIFVWGLQPD 201
Query: 173 SQ-LGVP-------GLPVVQ 184
+ L P LPVVQ
Sbjct: 202 GRVLYAPKEIEFFMALPVVQ 221
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 14/176 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
L+ WG + G+L L P+ IP +V +L V V+CG T+ + E G++
Sbjct: 141 RLFAWGSN-SHGQLAL-----PSNITSTDIPKRVVSLTETVQ-VACGTDHTIAIVESGRI 193
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + GR + PK + + + ++Q+ G + +ALT G +F WG +
Sbjct: 194 FVWGLQPD---GRV----LYAPKEIEFFMALPVVQVNAGSDYYVALTVSGAMFVWGSNEY 246
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S + + P + L V H+ACG S + A+T +G+L++ G+ QLG
Sbjct: 247 GQLGTSDNKERTTPAEVTTLHSLNVVHVACGHSHTVALTHEGRLFVCGSDSCGQLG 302
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 12/164 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WG +E G+LG + + P++V L + V V+CG T+ LT EG+L
Sbjct: 238 MFVWGSNE-YGQLGTSDNKER------TTPAEVTTLHSLNVVHVACGHSHTVALTHEGRL 290
Query: 61 WNWGANSNYELGRGDRVGGWKPKL-LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ G++S +LG G +V L + ++ + ++A G H+LAL GK++++G
Sbjct: 291 FVCGSDSCGQLGSGRKVPSQNTMLAVTEMLGTHVTRVACGRCHTLALA-GGKMYAFGLNS 349
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGK 163
GQLG ++Q P I+AL D V + G S + K +
Sbjct: 350 SGQLGSGNVRSQVTPRPIDALTD--VVSVFAGWDQSFCIQSKNE 391
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 94/178 (52%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + I+ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4038 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4094
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4095 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN 4154
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G L + +G+ +LG+
Sbjct: 4155 KKLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGL 4202
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P KV L + + V+CG F++ LT++G ++
Sbjct: 4190 WAFGDGDYGKLGLG------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4243
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+L+P L+ + I IA G H+LAL+ G+V++WG GQ
Sbjct: 4244 FGQDRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQ 4303
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ AL + + I+ G SAA T
Sbjct: 4304 LGLGHTNHVREPTLVTALQGKNIRQISAGRCHSAAWT 4340
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 14/172 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPG---RGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E+++WG D G+LG G + P G ++ KV V VS G + +TE+
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQG-TLQGKV------VVCVSAGYRHSAAVTED 529
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWG 116
G+L+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G +G+LGH T P V+EAL F + G +S A+T G++Y WG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWG 639
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGG 100
V CG T V+ G + G S LG+G+ ++ L V +++
Sbjct: 4013 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4072
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
HS+ALT+ G+VFSWG G +G+LGH + Q+ P IEAL E V ++CG SA VT
Sbjct: 4073 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA 4132
Query: 161 KGKLYMWGNAKDSQLGV 177
GKL+ +GN +LG+
Sbjct: 4133 DGKLFTFGNGDYGRLGL 4149
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + + V+CG T+ ++ +G
Sbjct: 4135 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGLHIGQVACGLNHTLAVSADGS 4187
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4188 LVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4247
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P ++ L F+ IA G + A++ G++Y WG+ + QLG+
Sbjct: 4248 RLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGL 4306
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPCFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + +S G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L V I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 784
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 90/188 (47%), Gaps = 10/188 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG + +G+LG G N S P V LP V A++ G + T LT G +W
Sbjct: 591 VWCWGTNS-DGQLG--DGTTTNR----STPVAVSGLPSGVTAIAAGNYHTCALTSSGGVW 643
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N + +LG G P + L + IA G H+ ALT G V+ WG +G
Sbjct: 644 CWGYNLSGQLGDGTTTNRSTPGAVSGLPS-GVTAIAAGDEHTCALTGSGGVWCWGDNYYG 702
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLP 181
QLG T N+ P + L VT IA G + A+T G + WGN D QLG G P
Sbjct: 703 QLGDGTTTNRSTPGAVSGL-PSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLG-DGRP 760
Query: 182 VVQPCPVE 189
+ + PV+
Sbjct: 761 LYRTTPVD 768
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S P V LP V A++ G + T LT +W WG NS+ +LG G P + L
Sbjct: 560 STPVAVGGLPSGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGL 619
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ IA G YH+ ALT G V+ WGY GQLG T N+ P + L VT I
Sbjct: 620 PS-GVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGL-PSGVTAI 677
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A G + A+T G ++ WG+ QLG
Sbjct: 678 AAGDEHTCALTGSGGVWCWGDNYYGQLG 705
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 83/175 (47%), Gaps = 9/175 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG D G G+LG G S P+ V LP V A++ GG +T LT G +W
Sbjct: 234 VWCWG-DNGFGQLGDGSFTDS------STPAAVGGLPSGVTAIAAGGRYTCALTSSGGVW 286
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N + +LG G P + L + IA GG H+ ALT G V+ WG G
Sbjct: 287 CWGRNDSGQLGDGSFTNRSTPGAVGGLPS-GVTAIAAGGAHTCALTSSGGVWCWGGNDSG 345
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG ++ P + L VT IA GG+ + A T G ++ WG QLG
Sbjct: 346 QLGDGSYTDRSTPGAVSGL-PSGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLG 399
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 68/148 (45%), Gaps = 2/148 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S P V LP V A++ GG T T G +W WG N +LG G P + L
Sbjct: 356 STPGAVSGLPSGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGL 415
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ IA G YH+ ALT V+ WG +GQLG T N+ P + L VT I
Sbjct: 416 PS-GVTAIAAGNYHTCALTGSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSGL-PSGVTAI 473
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A G + A+T G ++ WG QLG
Sbjct: 474 AAGNYHTCALTSSGGVWCWGRNDSGQLG 501
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S P V LP V A++ GG T L G +W WG N + +LG G + P + L
Sbjct: 152 STPVAVSGLPSGVTAIAAGGAHTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGL 211
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ IA G H+ ALT G V+ WG G GQLG + P + L VT I
Sbjct: 212 PS-EVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGL-PSGVTAI 269
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A GG + A+T G ++ WG QLG
Sbjct: 270 AAGGRYTCALTSSGGVWCWGRNDSGQLG 297
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S P V LP V A++ G + T LT G +W WG N + +LG G P + L
Sbjct: 458 STPGAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGL 517
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ IA G YH+ AL G V+ WG GQLG + P+ + L V I
Sbjct: 518 PS-GVTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGL-PSGVMAI 575
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A G + A+T ++ WG D QLG
Sbjct: 576 AAGNYHTCALTGSDGVWCWGTNSDGQLG 603
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S P V LP V A++ GG T LT G + WG N +LG G P + L
Sbjct: 101 STPVAVSGLPSGVTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGL 160
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ IA GG H+ AL G V+ WGY GQLG T P+ + L E VT I
Sbjct: 161 PS-GVTAIAAGGAHTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSE-VTAI 218
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
A G + + A+T G ++ WG+ QLG
Sbjct: 219 AAGYAHTCALTGSGGVWCWGDNGFGQLG 246
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V A++ G + T LT G++W WG N + +LG G P + L + IA GG
Sbjct: 62 VTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLPS-GVTAIAAGG 120
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
H+ ALT G V WG GQLG ++ P+ + L VT IA GG+ + A+
Sbjct: 121 AHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGL-PSGVTAIAAGGAHTCALMS 179
Query: 161 KGKLYMWGNAKDSQLG 176
G ++ WG QLG
Sbjct: 180 SGGVWCWGYNLSGQLG 195
>gi|356495400|ref|XP_003516566.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 432
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 83/164 (50%), Gaps = 5/164 (3%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG---DRVGGWKPKLLPN 87
P+ V ALP + +V G + ++ LT G LW WG N+ +LGRG R +P+ +
Sbjct: 46 PTPVTALPSDIVSVHAGHYHSLALTSHGHLWAWGRNNEAQLGRGPSSSRESWHEPERVKG 105
Query: 88 LVD-VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFV 145
L++ V + G S AL DDG V+ WG GQLG VP +EAL+ E V
Sbjct: 106 LLENVNVCGAFASGVVSAALGDDGSVWVWGKSKRGQLGLGQHITEAVVPTKLEALSRENV 165
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
+A G + A T GKL+ WG + D ++G G Q P+E
Sbjct: 166 AKVAFGWGHALARTSDGKLFGWGYSADGRIGKMGNNHFQTSPLE 209
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 16/161 (9%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V V ++CG ++VL +G L + G+N +LGR G + P + + IA
Sbjct: 255 VHVLDIACGLDHSLVLCRDGVLLSCGSNVYGQLGRAKIDLG----VFPVEMSFSPVFIAA 310
Query: 99 GGYHSLALTDDGK---------VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
G HSLA+ G+ + SWG+ QLG + K+P +I+AL E ++
Sbjct: 311 GLGHSLAICQFGESDVSVGTTNIASWGWNLSSQLGR--PGDGKLPSLIDALDGENPVSVS 368
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLGV-PGLPVVQPCPVE 189
G + S A+T KG+L++WG+ K +LG+ + V+P ++
Sbjct: 369 AGRAHSLALTSKGELWVWGSGKSGRLGLGSSVNQVEPSCID 409
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+WG N + +LGR GD G P L+ L + ++ G HSLALT G+++ WG G
Sbjct: 335 SWGWNLSSQLGRPGD---GKLPSLIDALDGENPVSVSAGRAHSLALTSKGELWVWGSGKS 391
Query: 121 GQLGHSFTQNQKVPMVIEAL 140
G+LG + NQ P I++L
Sbjct: 392 GRLGLGSSVNQVEPSCIDSL 411
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 30 IPSKVKAL--PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN 87
+PS + AL PV+ VS G ++ LT +G+LW WG+ + LG G V +P + +
Sbjct: 352 LPSLIDALDGENPVS-VSAGRAHSLALTSKGELWVWGSGKSGRLGLGSSVNQVEPSCIDS 410
Query: 88 LVDVRIIQIANGGYHSLALT 107
L +I+Q +G H+L L
Sbjct: 411 LEAFQILQAVSGFDHNLVLV 430
>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4588
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 99/189 (52%), Gaps = 14/189 (7%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG + N P+ VK + V V+CG T+ + ++G+
Sbjct: 497 ELYTWG--EGDFGRLGHSDSQSRN------TPTLVKDIS-GVGQVACGSSHTIAVAQDGR 547
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD ++PK++ L I ++ G SLALT G+VF+WG G
Sbjct: 548 TMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCG 607
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV- 177
G S T + + P +E L+ + I+CG S A++ + ++Y WGN Q G
Sbjct: 608 SCLGCGSSETTSLR-PRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQG 666
Query: 178 -PGLPVVQP 185
P+ +P
Sbjct: 667 HTSTPITRP 675
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G G N L++P+ L V CG + ++ G +
Sbjct: 3682 DVYLWG----NGRYGQLAGTGTN----LTLPTLAPCLS-QTQQVVCGQNCSFLIQSNGAV 3732
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G LG+G+ + P ++ V +++ HS+ALT+ G+VFSWG
Sbjct: 3733 MAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGD 3792
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH + Q+ P IEAL E V +ACG SA VT GKL+ +G+ + +LG
Sbjct: 3793 GDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLG 3851
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 90/162 (55%), Gaps = 14/162 (8%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP----VPVAAVSCGGFFTMVLTEEGQLWNWGANS 67
GRLGLG ++ S+P K+ P V + T+ +T +G++++WG
Sbjct: 399 GRLGLG------DSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGE 452
Query: 68 NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY-HSLALTDDGKVFSWGYGGHGQLGHS 126
+LG G+ PK++ + +I+ A+ GY HS A+T+DG++++WG G G+LGHS
Sbjct: 453 YGKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGHS 512
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+Q++ P +++ ++ V +ACG S + AV + G+ MW
Sbjct: 513 DSQSRNTPTLVKDISG--VGQVACGSSHTIAVAQDGR-TMWS 551
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 10 GEGRLG-LGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGF-FTMVLTEEGQLWNWG 64
GEG+ G LG G + L +P+ + A V SCG +M LTE G++++WG
Sbjct: 3736 GEGQYGRLGQGNSDD----LFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWG 3791
Query: 65 ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
+LG G+ +PK + L ++Q+A G HS +T DGK+F++G G G+LG
Sbjct: 3792 DGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLG 3851
Query: 125 HSFTQNQKVPMVIEALADEFVTHIACG 151
T N+ P + AL V ++CG
Sbjct: 3852 QRSTSNKMQPERVAALEGYHVGQVSCG 3878
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANG 99
+ G + T ++ +G + G S LG GD PK L P+ ++
Sbjct: 373 TIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGS 432
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAV 158
H+LA+T DG+VFSWG G +G+LGH + QK P +++ L + V + G SAAV
Sbjct: 433 DGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAV 492
Query: 159 TEKGKLYMWGNAKDSQLG 176
T G+LY WG +LG
Sbjct: 493 TNDGELYTWGEGDFGRLG 510
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G E GRLG + P +V AL V VSCG T+VL+ +G
Sbjct: 3838 KLFTFGSGES-GRLGQRSTSNKMQ------PERVAALEGYHVGQVSCGLNHTLVLSLDGM 3890
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W +G +LG G + P+ + L + + ++ G S+ L DG V+++G
Sbjct: 3891 AVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQE 3950
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L S +N+ P V+ +L F+ IA G A++ G +Y WG + QLG+
Sbjct: 3951 RLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGL 4009
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
P KV+ L + V CG F++VL +G ++ +G L P+++P+L
Sbjct: 3914 PQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLE 3973
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIA 149
+ I IA G H LAL+ G +++WG GQLG K P +I AL + + I+
Sbjct: 3974 GLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCNLVKEPTLITALQGKNIKQIS 4033
Query: 150 CGGSTSAA 157
G S+A
Sbjct: 4034 AGRCHSSA 4041
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
+++ WG G G G +E L P V+ L + + +SCG + L+ E +
Sbjct: 600 QVFAWG-------CGSCLGCGSSETTSLR-PRFVEDLSITKIIDISCGDSHCLALSHENE 651
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALT---DDGKVFSW 115
++ WG N+ + G+G +PK + L V I QI G HSLA T D ++ +W
Sbjct: 652 VYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 711
>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 416
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 103/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG D EG++GL + +P +V + P++ +SCG + + +T EGQL
Sbjct: 160 ELFMWG-DNSEGQIGL------ENVTNVCVPQQV-TVGKPISWISCGYYHSAFVTTEGQL 211
Query: 61 WNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G +LG ++ V P+ +P + +++Q+A GG H++ LT+ V+++G G
Sbjct: 212 YTFGEPECGKLGLPNQLLVNHRMPQPVPG-IPGKVVQVACGGGHTVVLTEKA-VYTFGLG 269
Query: 119 GHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F VP IE + D+ ++ IACG + +A +T+ G +Y +G+ + +LG+
Sbjct: 270 QFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGL 329
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 99/194 (51%), Gaps = 16/194 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G+
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGK 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII-QIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD L+ R I Q++ G S ALT+DG++F WG
Sbjct: 108 VYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + ++ I+CG SA VT +G+LY +G + +LG+P
Sbjct: 168 SEGQIGLENVTNVCVPQ--QVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLP 225
Query: 179 GLPVV-----QPCP 187
+V QP P
Sbjct: 226 NQLLVNHRMPQPVP 239
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+IPSK +SCG T V+T +L+ +G+N+ +LG G + KP + L
Sbjct: 25 NIPSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKAL 84
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTH 147
++ A G H+L T+ GKV++ G GQLG T+ + +I + +
Sbjct: 85 KPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQ 144
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVV 183
++ G +TSAA+TE G+L+MWG+ + Q+G+ + V
Sbjct: 145 LSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNV 180
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEA-GGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LYT+G E G+LGL PN+ +P V +P V V+CGG T+VLTE+
Sbjct: 210 QLYTFGEPEC-GKLGL-----PNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKA- 262
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ +G +LG G + PK + ++ D +I IA G H+ +TD G ++++G G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Query: 119 GHGQLGHSF--TQNQKVPMVIEALADEFVTHIACGG 152
HG+LG + NQ +P + V ++CGG
Sbjct: 323 RHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGG 358
>gi|342181807|emb|CCC91286.1| putative regulator of chromosome condensation [Trypanosoma
congolense IL3000]
Length = 581
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++TWG + G+ G+G P E +S P +VK L + V CG FF + L+ G
Sbjct: 273 RVFTWGSNV-YGQCGIGVN--PAENSRISEPQEVKWLADKMIVQVVCGCFFALALSASGC 329
Query: 60 LWNWGANSNYELGR-----------------GDRVGG-WKPKLLPNLVDVRIIQIANGGY 101
+++WG LG D + P +PNL + I+ +A G +
Sbjct: 330 VYSWGCIECCGLGDLPLPSDIPSSLVMESLGPDSIASILLPVKVPNLSN--IVALATGAW 387
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEK 161
HSLAL G +++WG G G+LG+ +++ P+ +E F T I CG S A+T+
Sbjct: 388 HSLALDAAGDIYAWGIGACGRLGYGGEEDRSTPVKVE--FSPFATKIGCGAFGSFAITDD 445
Query: 162 GKLYMWGNAKDSQLGVPGLPVVQPCPV 188
GKLY+WG QL G V+ P V
Sbjct: 446 GKLYVWGANGRGQLSTSGSRVLLPTHV 472
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G +H+ A+ +G+V+SWG G +G+LGH ++ P I+AL V +ACG + V
Sbjct: 2 GPWHAFAIDHEGRVYSWGCGKNGRLGHGDEKDVFTPKEIKALKYN-VADVACGSFHTCLV 60
Query: 159 TEKGKLYMWGNAKDSQLGVPGLPVVQPC 186
T+ G Y G+ + Q GV G +V+ C
Sbjct: 61 TKSGLAYACGDNQGGQCGVLGEAMVKTC 88
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 14/146 (9%)
Query: 50 FTMVLTEEGQLWNWGANSNYELGRG-DRVGGWKPKLLP---------NLVDVRIIQIANG 99
F+++L G + G +LG RV + + +P +L I+Q++ G
Sbjct: 202 FSIMLNRRGSCYAMGLGGWGQLGIDISRVKDFTHEKVPVVRHATKITSLSSTAIMQVSAG 261
Query: 100 GYHSLALTDDGKVFSWGYGGHGQ--LGHSFTQNQKV--PMVIEALADEFVTHIACGGSTS 155
+ AL+D +VF+WG +GQ +G + +N ++ P ++ LAD+ + + CG +
Sbjct: 262 ICFAAALSDTQRVFTWGSNVYGQCGIGVNPAENSRISEPQEVKWLADKMIVQVVCGCFFA 321
Query: 156 AAVTEKGKLYMWGNAKDSQLGVPGLP 181
A++ G +Y WG + LG LP
Sbjct: 322 LALSASGCVYSWGCIECCGLGDLPLP 347
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 25/171 (14%)
Query: 32 SKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG------DRVGGWKPKL 84
+K+ +L + VS G F L++ +++ WG+N + G G R+ +P+
Sbjct: 245 TKITSLSSTAIMQVSAGICFAAALSDTQRVFTWGSNVYGQCGIGVNPAENSRIS--EPQE 302
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADE 143
+ L D I+Q+ G + +LAL+ G V+SWG LG + +V+E+L +
Sbjct: 303 VKWLADKMIVQVVCGCFFALALSASGCVYSWGCIECCGLGDLPLPSDIPSSLVMESLGPD 362
Query: 144 FVTHI---------------ACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ I A G S A+ G +Y WG +LG G
Sbjct: 363 SIASILLPVKVPNLSNIVALATGAWHSLALDAAGDIYAWGIGACGRLGYGG 413
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG + GRLG G + + P ++KAL VA V+CG F T ++T+ G
Sbjct: 14 RVYSWGCGK-NGRLGHG------DEKDVFTPKEIKALKYNVADVACGSFHTCLVTKSGLA 66
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
+ G N + G + L R+I G +H+L L + G+V ++
Sbjct: 67 YACGDNQGGQCGVLGEAMVKTCRQLQVPSHQRVISATCGRHHTLLLLETGEVVAF 121
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GRLG G G + S P KV+ P + CG F + +T++G+L
Sbjct: 397 DIYAWGIGAC-GRLGYG---GEEDR---STPVKVEFSPF-ATKIGCGAFGSFAITDDGKL 448
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
+ WGAN GRG LLP V +++ A G Y +L L
Sbjct: 449 YVWGAN-----GRGQLSTSGSRVLLPTHVLDGVMEAALGKYFALVL 489
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
G + + EG++++WG N LG GD + PK + L + +A G +H+ +
Sbjct: 2 GPWHAFAIDHEGRVYSWGCGKNGRLGHGDEKDVFTPKEIKAL-KYNVADVACGSFHTCLV 60
Query: 107 TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
T G ++ G GQ G K ++ + + V CG + + E G++
Sbjct: 61 TKSGLAYACGDNQGGQCGVLGEAMVKTCRQLQVPSHQRVISATCGRHHTLLLLETGEVVA 120
Query: 167 W 167
+
Sbjct: 121 F 121
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ-----NQKVPMV-----IEALAD 142
++ A G S+ L G ++ G GG GQLG ++ ++KVP+V I +L+
Sbjct: 193 LLDAALGQGFSIMLNRRGSCYAMGLGGWGQLGIDISRVKDFTHEKVPVVRHATKITSLSS 252
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++ G +AA+++ +++ WG+ Q G+
Sbjct: 253 TAIMQVSAGICFAAALSDTQRVFTWGSNVYGQCGI 287
>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
Length = 560
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 18/182 (9%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
LY WG EG+ GRLGLG +A S+P +V + + V CG T+VL+ +G+
Sbjct: 286 HLYMWG--EGDYGRLGLG------DALQRSVPVQVPDIR-EASQVVCGFNHTVVLSTDGR 336
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++GA N +LG GD ++PK++ L + I QIA G S A+T +G ++ WG+G
Sbjct: 337 TVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFG 396
Query: 119 ---GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G+G +F +P V+ L+ V IA G + A+T+ G ++ WGN ++ Q
Sbjct: 397 PCLGNGSSDETFM----LPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQNGQC 452
Query: 176 GV 177
G
Sbjct: 453 GT 454
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++ WG + + P LS+ KV +++ G + T + G +
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLLYPRNLSVYGKV-------MSITAGQYCTFAVLSNGTV 182
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY-HSLALTDDGKVFSWGYGG 119
G S LG G P L+ VR I + G HS+A+ +G++++WG G
Sbjct: 183 MANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGD 242
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+G+LGH + QK P +IEALA + CG SAAV + G LYMWG +LG+ G
Sbjct: 243 YGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGL-G 301
Query: 180 LPVVQPCPVE 189
+ + PV+
Sbjct: 302 DALQRSVPVQ 311
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 86/170 (50%), Gaps = 11/170 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAA-VSCGGFFTMVLTEEGQ 59
+++TWG D G+LG G P ++AL V CG + + + G
Sbjct: 234 QIWTWG-DGDYGKLGHGDSTTQKS------PKLIEALASRVIVDADCGHRHSAAVCDAGH 286
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYG 118
L+ WG LG GD + P +P++ + Q+ G H++ L+ DG+ V+S+G
Sbjct: 287 LYMWGEGDYGRLGLGDALQRSVPVQVPDIREAS--QVVCGFNHTVVLSTDGRTVWSFGAA 344
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T Q P +I+AL +T IA G SAAVT +G LY+WG
Sbjct: 345 ENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWG 394
>gi|345856409|ref|ZP_08808895.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
gi|344330533|gb|EGW41825.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
Length = 1419
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 85/160 (53%), Gaps = 5/160 (3%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S P +V+ L ++V+ GG ++ L ++ + WG N + +LG G + L
Sbjct: 542 STPVRVQGLKGQASSVAAGGTHSLALLQDKSVAAWGNNDHGQLGDGSFTNRNTAATVNGL 601
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
D I+ IA G HSLA+ DG V++WG GQLG + + P+ ++ L+ VT I
Sbjct: 602 SD--IVGIAAGERHSLAVQSDGSVWAWGDNSSGQLGDGTLKERSTPVKVKGLSQ--VTKI 657
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPV 188
A GG TS A+T GK++ WGN +D QLG G Q PV
Sbjct: 658 AAGGDTSLAITADGKVWAWGNNQDGQLG-DGTTNNQSTPV 696
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 86/176 (48%), Gaps = 7/176 (3%)
Query: 15 GLGP-GRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR 73
G GP G ++ +P + K L V A+S GG + L +G +W+WG+N ELG
Sbjct: 74 GTGPLGNNDADSNSALVPVQAKNL-TDVIAISAGGDVALALKNDGTVWSWGSNQYGELGD 132
Query: 74 GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV 133
G P +P+L + IA G + LAL +DG V++WG +G LG T ++K
Sbjct: 133 GSTTNRNSPAPVPSLSGIS--AIATGYSYCLALKNDGTVWAWGSNQNGALGDGTTDDRKT 190
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
P+ I L+ V IA +S A+ G ++ WG QLG GL Q P+
Sbjct: 191 PVQISGLSG--VVSIAANYHSSYAIKSDGTVWAWGLNDQGQLG-DGLSKDQWLPIN 243
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 5 WGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWG 64
WG ++ G+LG G N A ++ S + ++ G ++ + +G +W WG
Sbjct: 576 WGNND-HGQLGDGSFTNRNTAATVNGLSDI-------VGIAAGERHSLAVQSDGSVWAWG 627
Query: 65 ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
NS+ +LG G P + L ++ +IA GG SLA+T DGKV++WG GQLG
Sbjct: 628 DNSSGQLGDGTLKERSTPVKVKGLS--QVTKIAAGGDTSLAITADGKVWAWGNNQDGQLG 685
Query: 125 HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
T NQ P+++ L+D VT ++ G + A+ G ++ WG+ S LG
Sbjct: 686 DGTTNNQSTPVLVPGLSD--VTTVSVGWTHCLALKSDGGVWAWGDNSQSILGT 736
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 90/190 (47%), Gaps = 13/190 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++ WG D G+LG G + S P KVK L V ++ GG ++ +T +G++
Sbjct: 622 SVWAWG-DNSSGQLGDGTLKE------RSTPVKVKGLS-QVTKIAAGGDTSLAITADGKV 673
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG N + +LG G P L+P L DV + + G H LAL DG V++WG
Sbjct: 674 WAWGNNQDGQLGDGTTNNQSTPVLVPGLSDVTTVSV--GWTHCLALKSDGGVWAWGDNSQ 731
Query: 121 GQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
LG S VP ++ L+ VT I+ G S A+T +G WG +QLG
Sbjct: 732 SILGTGSADAYCAVPTQVKGLSG--VTAISAGNQFSLAMTNQGVAEAWGRNDFNQLGDGS 789
Query: 180 LPVVQPCPVE 189
+ PV+
Sbjct: 790 AAKFESTPVQ 799
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 28 LSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR--GDRVGGWKPKLL 85
+ +P A + A+S + + + +G +W WG LG D P
Sbjct: 38 MVLPQTAYASGAKITAISANEAYALAMKSDGTVWGWGTG---PLGNNDADSNSALVPVQA 94
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFV 145
NL DV I I+ GG +LAL +DG V+SWG +G+LG T N+ P + +L+ +
Sbjct: 95 KNLTDV--IAISAGGDVALALKNDGTVWSWGSNQYGELGDGSTTNRNSPAPVPSLSG--I 150
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ IA G S A+ G ++ WG+ ++ LG
Sbjct: 151 SAIATGYSYCLALKNDGTVWAWGSNQNGALG 181
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WG+N+ +LG G + P + L + +A GG HSLAL D V +WG HGQ
Sbjct: 525 WGSNTYGQLGDGTNIQRSTPVRVQGLKG-QASSVAAGGTHSLALLQDKSVAAWGNNDHGQ 583
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
LG N+ + L+D + IA G S AV G ++ WG+ QLG
Sbjct: 584 LGDGSFTNRNTAATVNGLSD--IVGIAAGERHSLAVQSDGSVWAWGDNSSGQLG 635
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 12/141 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG D + LG G ++P++VK L V A+S G F++ +T +G
Sbjct: 723 VWAWG-DNSQSILGTGSADAY-----CAVPTQVKGLS-GVTAISAGNQFSLAMTNQGVAE 775
Query: 62 NWGANSNYELGRGDRVG-GWKPKLLPNLVDVRIIQ--IANGGYHSLALTDDGKVFSWGYG 118
WG N +LG G P + N+ V ++ I+ GGYH+L T + SWGY
Sbjct: 776 AWGRNDFNQLGDGSAAKFESTPVQIKNMPLVPVVDQSISAGGYHALCGTLGTR--SWGYN 833
Query: 119 GHGQLGHSFTQNQKVPMVIEA 139
GQLG T++ +P I +
Sbjct: 834 ASGQLGLGITEHISIPEAISS 854
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
P +V+ L +AV+C G++ + L +G +W WG N N ELG G + + P
Sbjct: 335 PVQVQGLSGTYSAVACLGWYDLALKTDGTVWAWGNNMNGELGDGTKDNHFVPS 387
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 21/162 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+++ WG ++ +G+LG G S P V L V VS G + L +G +
Sbjct: 672 KVWAWGNNQ-DGQLGDG------TTNNQSTPVLVPGLS-DVTTVSVGWTHCLALKSDGGV 723
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
W WG NS LG G P + L V I+ G SLA+T+ G +WG
Sbjct: 724 WAWGDNSQSILGTGSADAYCAVPTQVKGLSGV--TAISAGNQFSLAMTNQGVAEAWGRND 781
Query: 120 HGQLGH-SFTQNQKVPMVIEAL-----ADEFVT----HIACG 151
QLG S + + P+ I+ + D+ ++ H CG
Sbjct: 782 FNQLGDGSAAKFESTPVQIKNMPLVPVVDQSISAGGYHALCG 823
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 20/136 (14%)
Query: 47 GGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV----RIIQIANGGYH 102
GGF V+ ++G LW G + N G + LV V ++ A G +
Sbjct: 255 GGFSLTVIKQDGSLWQLGLSVN---------GSVSNDVEYTLVQVPGLSHVVSAAAGQNN 305
Query: 103 SLALTDDGKVFSWGYG--GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
+A+ D V++WG G+G + Q P+ ++ L+ + + +AC G A+
Sbjct: 306 FMAILQDQTVWTWGNALPGYGSMNTVTPQ----PVQVQGLSGTY-SAVACLGWYDLALKT 360
Query: 161 KGKLYMWGNAKDSQLG 176
G ++ WGN + +LG
Sbjct: 361 DGTVWAWGNNMNGELG 376
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTS 155
++ G HSL+ + V +WG +GQLG + P+ ++ L + + +A GG+ S
Sbjct: 508 VSAGDSHSLSAGE--YVMAWGSNTYGQLGDGTNIQRSTPVRVQGLKGQ-ASSVAAGGTHS 564
Query: 156 AAVTEKGKLYMWGNAKDSQLG 176
A+ + + WGN QLG
Sbjct: 565 LALLQDKSVAAWGNNDHGQLG 585
>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
Length = 2101
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLG G E G P++V L +AAV+CG T+ LT +G+++ +GA L
Sbjct: 1834 GRLGTG------ETGSSLYPTRVTDLQ-NIAAVACGREHTLALTRKGRVFAFGAGFGGRL 1886
Query: 72 GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
G G P + L D RI I G HS AL+ +G V +WG+G G LGH N
Sbjct: 1887 GNGSETDEELPFAVQGLEDYRIAAIDAGECHSCALSTEGDVLTWGFGSSGALGHGDRDNC 1946
Query: 132 KVPMVIE--------------ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
P IE A V+ IACG + A T G LY WG+A QL V
Sbjct: 1947 LEPRRIEGPWTGNAIDGEENQASETSVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSV 2006
Query: 178 -----PGLPVVQP 185
P + V+ P
Sbjct: 2007 EYITAPEMVVLTP 2019
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP-----NLVD----- 90
+AA+ G + L+ EG + WG S+ LG GDR +P+ + N +D
Sbjct: 1908 IAAIDAGECHSCALSTEGDVLTWGFGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQ 1967
Query: 91 ----VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV----PMVIEALAD 142
+ IA G YH+LA T DG ++ WG GQL + ++ P I +
Sbjct: 1968 ASETSVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVPTN 2027
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ +ACG TSA T +G L++WG+
Sbjct: 2028 SGIRSVACGTFTSAVCTNQGHLFLWGS 2054
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 31 PSKVKALPVP---VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK---L 84
P ++ + P P V ++CG T ++T++ L+ +G LG G++ +P
Sbjct: 1732 PIRMASFPRPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEPVSVGY 1791
Query: 85 LPNLVDVRIIQI------ANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE 138
+L++ + + + G H++A+T G +F +G+G G+LG T + P +
Sbjct: 1792 FTSLIEAEGVDVGGVVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRVT 1851
Query: 139 ALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
L + + +ACG + A+T KG+++ +G
Sbjct: 1852 DLQN--IAAVACGREHTLALTRKGRVFAFG 1879
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM-------VIEA--LAD 142
R++QIA G H+ +TDD ++++G+G G+LGH ++ P+ +IEA +
Sbjct: 1744 RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEPVSVGYFTSLIEAEGVDV 1803
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V ++CG + AVT G L+ +G + +LG
Sbjct: 1804 GGVVEVSCGREHTMAVTASGDLFGFGWGEAGRLGT 1838
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP----VAAVSCGGFFTMVLTEE 57
LY WG D G+L + P + P +++ VP + +V+CG F + V T +
Sbjct: 1993 LYGWG-DAAAGQLSVEYITAPEMV--VLTPQRIR---VPTNSGIRSVACGTFTSAVCTNQ 2046
Query: 58 GQLWNWGANSNYELGRGD--RVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G L+ WG+ + G G V + K + L + Q+A G YH++A+T
Sbjct: 2047 GHLFLWGSPAA---GNGAPLEVDDARVKRIGVLGEFEFSQVACGAYHAVAIT 2095
>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
Length = 516
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 18/182 (9%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
LY WG EG+ GRLGLG +A S+P +V + + V CG T+VL+ +G+
Sbjct: 286 HLYMWG--EGDYGRLGLG------DALQRSVPVQVPDIR-EASQVVCGFNHTVVLSTDGR 336
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++GA N +LG GD ++PK++ L + I QIA G S A+T +G ++ WG+G
Sbjct: 337 TVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFG 396
Query: 119 ---GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G+G +F +P V+ L+ V IA G + A+T+ G ++ WGN ++ Q
Sbjct: 397 PCLGNGSSDETFM----LPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQC 452
Query: 176 GV 177
G
Sbjct: 453 GT 454
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 86/170 (50%), Gaps = 11/170 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAA-VSCGGFFTMVLTEEGQ 59
+++TWG D G+LG G P ++AL V CG + + + G
Sbjct: 234 QIWTWG-DGDYGKLGHGDSTTQKS------PKLIEALASRVIVDADCGHRHSAAVCDAGH 286
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYG 118
L+ WG LG GD + P +P++ + Q+ G H++ L+ DG+ V+S+G
Sbjct: 287 LYMWGEGDYGRLGLGDALQRSVPVQVPDIREAS--QVVCGFNHTVVLSTDGRTVWSFGAA 344
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T Q P +I+AL +T IA G SAAVT +G LY+WG
Sbjct: 345 ENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWG 394
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++ WG + + P LS+ KV ++ + G + T + G +
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLLYPRNLSVYGKVMSM-------TAGQYCTFAVLSNGTV 182
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY-HSLALTDDGKVFSWGYGG 119
G S LG G P L+ VR I + G HS+A+ +G++++WG G
Sbjct: 183 MANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGD 242
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+G+LGH + QK P +IEALA + CG SAAV + G LYMWG +LG+ G
Sbjct: 243 YGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGL-G 301
Query: 180 LPVVQPCPVE 189
+ + PV+
Sbjct: 302 DALQRSVPVQ 311
>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
Length = 1365
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/194 (31%), Positives = 95/194 (48%), Gaps = 28/194 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP--------VAAVSCGGFFTM 52
E+++WG D+ G+LGLG ++ G K+ PVP + VSCG
Sbjct: 83 EIFSWGSDQA-GQLGLGQ----SQIG--------KSYPVPRYCTYNIGIKYVSCGDEHAA 129
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+T +++ G+N+N +LG GD K P L+ L+D + I IA G H+L T+ G
Sbjct: 130 FITTGNMVYSMGSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERG 189
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVT-----HIACGGSTSAAVTEKGKLY 165
V+SWG G G LG +Q +P +I D+ T ++ G SA + + G++Y
Sbjct: 190 DVYSWGQGIFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVY 249
Query: 166 MWGNAKDSQLGVPG 179
G QLG+ G
Sbjct: 250 TCGQNDAGQLGIGG 263
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 50/205 (24%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+YT G+++ G+LG+G GR +IP +K P V+ ++CG ++LT++G ++
Sbjct: 248 VYTCGQNDA-GQLGIG-GRDQE-----NIPISIKKFPERVSMIACGQMHLLMLTKQGTVY 300
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS------------------ 103
+ GANS +LG ++ P L+ ++ + + +A G + +
Sbjct: 301 SCGANSFGQLGLNNKRNSSSPLLIQDISHIPMRYVAAGSFSASISYDSGDLYLWGSGVFG 360
Query: 104 -------------------------LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE 138
+A+ DG V+SWG+ G+LG + P +I
Sbjct: 361 EFLTPHRVKTIKGMTVSVSIGNHFGIAVNQDGIVYSWGHNNSGELGQGDFDERPTPQIIN 420
Query: 139 ALADEFVTHIACGGSTSAAVTEKGK 163
L D+ VT ++CG + S A+ + K
Sbjct: 421 QLNDKIVTLVSCGRNFSIALGQTLK 445
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 59 QLWNWGANSNYELGRG-DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++++WG++ +LG G ++G P ++ I ++ G H+ +T V+S G
Sbjct: 83 EIFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMGS 142
Query: 118 GGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+GQLG + + PM++EAL D+ IACG + + TE+G +Y WG L
Sbjct: 143 NTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFGAL 202
Query: 176 GVPGL 180
G L
Sbjct: 203 GAGNL 207
>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Ailuropoda melanoleuca]
Length = 1011
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 103/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG D EG++GL + +P +V + P++ +SCG + + +T EG+L
Sbjct: 170 ELFMWG-DNSEGQIGL------KNITNVCVPQQV-TVGKPISWISCGYYHSAFVTTEGEL 221
Query: 61 WNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G + +LG + V P+ +P + + +++Q+A GG H++ LT+ V+++G G
Sbjct: 222 YTFGEPESGKLGLPKQLLVNHRMPQSVPGIPE-KVVQVACGGGHTVVLTEKA-VYTFGLG 279
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F VP VIE + D ++ I CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 280 QFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDGRHGKLGL 339
Score = 84.0 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG N+ P+ VKAL P V +CG T+V TE G+
Sbjct: 65 KLYMFGSNNW-GQLGLGSKSTVNK------PTCVKALKPEKVKFAACGRNHTLVSTEGGK 117
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII-QIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD L+ R I Q++ G S ALT+DG++F WG
Sbjct: 118 VYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDN 177
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + ++ I+CG SA VT +G+LY +G + +LG+P
Sbjct: 178 SEGQIGLKNITNVCVPQ--QVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLP 235
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+IPSK A +SCG T ++T +L+ +G+N+ +LG G + KP + L
Sbjct: 35 NIPSKFWFKNDIPAFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKAL 94
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTH 147
++ A G H+L T+ GKV++ G GQLG T + +I + +
Sbjct: 95 KPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQ 154
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
++ G +TSAA+TE G+L+MWG+ + Q+G+ +
Sbjct: 155 LSAGSNTSAALTEDGELFMWGDNSEGQIGLKNI 187
>gi|219128407|ref|XP_002184405.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404206|gb|EEC44154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 643
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 13/188 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKV-KALP----VPVAAVSCGGFFTMVLTEEGQLWNWGAN 66
G+LGLG G ++ P + + LP PV V+CG + + L+ G++W WG+N
Sbjct: 140 GQLGLGHAEGNSQITFTPYPIVMQRLLPRVIGSPVLQVACGSWHGLALSASGRVWAWGSN 199
Query: 67 SNYELGRGDRV---GGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ GR + P +L P ++V QIA G HS+A+ D +V+ WG H
Sbjct: 200 RTQQCGRKPTLTAGSNHAPTVLVPLPVPLEVMATQIAAGRSHSVAIARD-QVYCWGSTAH 258
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQ G+S + P ++E LA+ V H+A G+ + A+T G+++ WG+ + QLG
Sbjct: 259 GQCGNSARRGGVTAPRLVEGLANLTVEHVAANGNHTLALTNGGRVFAWGSNAEGQLGTGP 318
Query: 180 LPVVQPCP 187
QP P
Sbjct: 319 ACAAQPKP 326
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 19 GRGPN-EAGGLSIPSKVKALPVPVAAVS---CGGFFTMVLTEEGQLWNWGANSNYELGRG 74
GR P AG P+ + LPVP+ ++ G V Q++ WG+ ++ + G
Sbjct: 205 GRKPTLTAGSNHAPTVLVPLPVPLEVMATQIAAGRSHSVAIARDQVYCWGSTAHGQCGNS 264
Query: 75 DRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQK 132
R GG P+L+ L ++ + +A G H+LALT+ G+VF+WG GQLG Q
Sbjct: 265 ARRGGVTAPRLVEGLANLTVEHVAANGNHTLALTNGGRVFAWGSNAEGQLGTGPACAAQP 324
Query: 133 VP--------MVIEA----LADEF-------------VTHIACGGSTSAAVTEKGKLYMW 167
P + IEA A++F + + G S SAAV+ G +Y W
Sbjct: 325 KPRHVGDVDFVAIEAGKEWKANKFAEVSASALSSVPRIASVYAGASYSAAVSTSGHVYTW 384
Query: 168 GNAKDSQLGV 177
G+ Q G+
Sbjct: 385 GSNDVGQAGL 394
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 30/171 (17%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
+ V+C T+ LT G++ Y+ G V P + + + ++IA G
Sbjct: 67 ITQVACSSQSTLFLTATGKV--------YQTGTLHGVVYKTPVPVTIPIPRKCVEIAAGR 118
Query: 101 YHSLALTDDG-KVFSWGYGGHGQ--LGHSFTQNQKV----PMVIEALADEF----VTHIA 149
+ L + G V SWG G GQ LGH+ +Q P+V++ L V +A
Sbjct: 119 HFCLGRMEGGLAVVSWGAGHFGQLGLGHAEGNSQITFTPYPIVMQRLLPRVIGSPVLQVA 178
Query: 150 CGGSTSAAVTEKGKLYMWGNAKDSQLG-----------VPGLPVVQPCPVE 189
CG A++ G+++ WG+ + Q G P + V P P+E
Sbjct: 179 CGSWHGLALSASGRVWAWGSNRTQQCGRKPTLTAGSNHAPTVLVPLPVPLE 229
>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
Length = 727
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 104/179 (58%), Gaps = 11/179 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG D EG+LGL + S P K+ + P++ +SCG + + +T++G+L
Sbjct: 162 KLFMWG-DNSEGQLGL------EKEAIYSTPQKID-IGKPISWISCGYYHSAFVTQDGEL 213
Query: 61 WNWGANSNYELG-RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G N +LG D++ K + + ++ ++ GG H++A+T+ +V+++G G
Sbjct: 214 YTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEK-EVYTFGLGQ 272
Query: 120 HGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH +F ++P ++ L + + ++ CG + +A +T+KG LY +G+ + +LG+
Sbjct: 273 FGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGL 331
Score = 86.7 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGL G +S P+ VKAL V SCG T++ TE+G+
Sbjct: 57 KLYVFGSNNW-GQLGLEAG------SAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGK 109
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNL-VDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L++ G NS +LG GD G + + +I Q++ G S ALT DGK+F WG
Sbjct: 110 LYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDN 169
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLG P I+ + ++ I+CG SA VT+ G+LY +G ++ +LG+P
Sbjct: 170 SEGQLGLEKEAIYSTPQKIDI--GKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGLP 227
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+IPSK A +SCG T+++T G+L+ +G+N+ +LG KP + L
Sbjct: 27 NIPSKFWLKNDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKAL 86
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTH 147
+++ + G H+L T+ GK++S G GQLG T + I ++ +
Sbjct: 87 KSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQ 146
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
++ G +TSAA+T GKL+MWG+ + QLG+
Sbjct: 147 LSAGSNTSAALTVDGKLFMWGDNSEGQLGL 176
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYT+G E G+LGL + P +V L V VSCGG T+ +TE+ ++
Sbjct: 212 ELYTFGEPE-NGKLGLPSDKLKKHKK----PQRVSGLSGKVKIVSCGGEHTIAVTEK-EV 265
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G +LG G + + PK + L I+ + G H+ +TD G ++++G G
Sbjct: 266 YTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGR 325
Query: 120 HGQLG---HSFTQNQKVPMVIEALADEFVTHIACGG 152
HG+LG +FT NQ VP++ V +ACGG
Sbjct: 326 HGKLGLGEENFT-NQFVPILCSNFLKFTVQSVACGG 360
>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
Length = 727
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 104/179 (58%), Gaps = 11/179 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG D EG+LGL + S P K+ + P++ +SCG + + +T++G+L
Sbjct: 162 KLFMWG-DNSEGQLGL------EKEAIYSTPQKID-IGKPISWISCGYYHSAFVTQDGEL 213
Query: 61 WNWGANSNYELG-RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G N +LG D++ K + + ++ ++ GG H++A+T+ +V+++G G
Sbjct: 214 YTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEK-EVYTFGLGQ 272
Query: 120 HGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH +F ++P ++ L + + ++ CG + +A +T+KG LY +G+ + +LG+
Sbjct: 273 FGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGL 331
Score = 86.7 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGL G +S P+ VKAL V SCG T++ TE+G+
Sbjct: 57 KLYVFGSNNW-GQLGLEAG------SAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGK 109
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNL-VDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
L++ G NS +LG GD G + + +I Q++ G S ALT DGK+F WG
Sbjct: 110 LYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDN 169
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLG P I+ + ++ I+CG SA VT+ G+LY +G ++ +LG+P
Sbjct: 170 SEGQLGLEKEAIYSTPQKIDI--GKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGLP 227
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+IPSK A +SCG T+++T G+L+ +G+N+ +LG KP + L
Sbjct: 27 NIPSKFWLKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKAL 86
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTH 147
+++ + G H+L T+ GK++S G GQLG T + I ++ +
Sbjct: 87 KSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQ 146
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
++ G +TSAA+T GKL+MWG+ + QLG+
Sbjct: 147 LSAGSNTSAALTVDGKLFMWGDNSEGQLGL 176
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYT+G E G+LGL + P +V L V VSCGG T+ +TE+ ++
Sbjct: 212 ELYTFGEPE-NGKLGLPSDKLKKHKK----PQRVSGLSGKVKIVSCGGEHTIAVTEK-EV 265
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G +LG G + + PK + L I+ + G H+ +TD G ++++G G
Sbjct: 266 YTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGR 325
Query: 120 HGQLG---HSFTQNQKVPMVIEALADEFVTHIACGG 152
HG+LG +FT NQ VP++ V +ACGG
Sbjct: 326 HGKLGLGEENFT-NQFVPILCSNFLKFTVQSVACGG 360
>gi|302753302|ref|XP_002960075.1| hypothetical protein SELMODRAFT_163545 [Selaginella moellendorffii]
gi|300171014|gb|EFJ37614.1| hypothetical protein SELMODRAFT_163545 [Selaginella moellendorffii]
Length = 1051
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL++WG + +LG G AG +P +V+ L + VS F + + GQ
Sbjct: 149 ELFSWG-NGSNYQLGTG------SAGIQRVPCRVETLHGADIVRVSAAKFHSTAVNSSGQ 201
Query: 60 LWNWGANSNYELGRGD---RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WG LG D V P+ + L R+ +A +H++ T+ G+V++WG
Sbjct: 202 LFSWGYGRGGRLGHEDYSGEVAVIAPRQVTGLCGRRVKNVAAAKHHTIVATEGGEVYTWG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG+ Q P + L + V +A SAAVTE G++Y WG KD QLG
Sbjct: 262 TNREGQLGYPAVDTQSTPRRVSTLRAKVV-EVAAANKHSAAVTESGEVYTWGCNKDGQLG 320
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+L++WG SNY+LG G P + L I++++ +HS A+ G++FSWGYG
Sbjct: 149 ELFSWGNGSNYQLGTGSAGIQRVPCRVETLHGADIVRVSAAKFHSTAVNSSGQLFSWGYG 208
Query: 119 GHGQLGHSFTQNQK---VPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G+LGH + P + L V ++A + TE G++Y WG ++ QL
Sbjct: 209 RGGRLGHEDYSGEVAVIAPRQVTGLCGRRVKNVAAAKHHTIVATEGGEVYTWGTNREGQL 268
Query: 176 GVPGL 180
G P +
Sbjct: 269 GYPAV 273
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 13/174 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSI--PSKVKALP-VPVAAVSCGGFFTMVLTEE 57
+L++WG G GRLG + +G +++ P +V L V V+ T+V TE
Sbjct: 201 QLFSWGYGRG-GRLG-----HEDYSGEVAVIAPRQVTGLCGRRVKNVAAAKHHTIVATEG 254
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N +LG P+ + L +++++A HS A+T+ G+V++WG
Sbjct: 255 GEVYTWGTNREGQLGYPAVDTQSTPRRVSTL-RAKVVEVAAANKHSAAVTESGEVYTWGC 313
Query: 118 GGHGQLGH--SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
GQLG+ S + + VP V++ L I+ + + E +++ WG+
Sbjct: 314 NKDGQLGYGTSNSASNCVPRVVDYLKGRKALTISAAKRHTVVIVET-EVFTWGH 366
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 27/181 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVA-AVSCGGFFTMVLTEEGQ 59
E+YTWG ++ +G+LG G N A +P V L A +S T+V+ E +
Sbjct: 307 EVYTWGCNK-DGQLGYGTS---NSASNC-VPRVVDYLKGRKALTISAAKRHTVVIVET-E 360
Query: 60 LWNWG----ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
++ WG + L R + G P + I+ +A G HS A+ DG +FSW
Sbjct: 361 VFTWGHKMVSPRRVVLVRNTKKAGQHPLKFHLSERLHIVAVAAGVVHSTAIAADGLIFSW 420
Query: 116 GYGG---HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
H Q + T + + ++ G +A T G +Y W + K
Sbjct: 421 LSADPQLHAQQVLTMTGHHAL-------------SVSAGKYRTAVATSTGDVYAWDSDKS 467
Query: 173 S 173
S
Sbjct: 468 S 468
>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
Length = 821
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 21/185 (11%)
Query: 1 ELYTWGRDEGEGRLGLG---PGRGPNE----AGGLSIPSKVKALPVP-----------VA 42
+L+ WG ++ +L LG G NE A +S+P ++ P +
Sbjct: 248 KLFVWGNND---KLQLGMDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLI 304
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYH 102
V +++ LT G ++ WG+ LG D +PK+L L ++ +I+ G YH
Sbjct: 305 GVHASYYYSAALTSNGNVYTWGSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYH 364
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
A+T+ G+VFSWG G +GQLGH N+ + AL + + I+CG S + A+T KG
Sbjct: 365 GAAITEQGQVFSWGRGINGQLGHGSVLNEDQVRPVSALQNIHIIDISCGESHTLALTNKG 424
Query: 163 KLYMW 167
++Y W
Sbjct: 425 EVYSW 429
Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 64/177 (36%), Positives = 98/177 (55%), Gaps = 11/177 (6%)
Query: 2 LYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+YTWG E GRLG + + P P +K L V +S G + +TE+GQ
Sbjct: 322 VYTWGSGEF-GRLGYMDIKKQPQ-------PKVLKELTGFQVTRISLGYYHGAAITEQGQ 373
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G + + + + L ++ II I+ G H+LALT+ G+V+SWG G
Sbjct: 374 VFSWGRGINGQLGHGSVLNEDQVRPVSALQNIHIIDISCGESHTLALTNKGEVYSWGGGQ 433
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLGH Q +P+ + L D + I+ G S+A+T+ GKL+ WG+ + QLG
Sbjct: 434 LGQLGHGDFLRQSLPIKVANLEDN-IAQISAGKRHSSALTDDGKLFTWGSNEYGQLG 489
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 44/212 (20%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP------VAAVSCGGFFTMVL- 54
+Y WG LGL G G + P ++ L + V +SCG T+ L
Sbjct: 182 VYGWG-------LGLNGRLGNENEGVVQEPQVLECLKIAMEIKMKVLQISCGENHTLALI 234
Query: 55 ---------TEEGQLWNWGANSNYELGRGDRVGGWKPKL-------LPNLVDV------- 91
T + +L+ WG N +LG ++ G + +P+ +D
Sbjct: 235 QMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADGNNEDMQSAREISVPHQLDPDPFQHDT 294
Query: 92 -------RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF 144
++I + Y+S ALT +G V++WG G G+LG+ + Q P V++ L
Sbjct: 295 DNKNYSNQLIGVHASYYYSAALTSNGNVYTWGSGEFGRLGYMDIKKQPQPKVLKELTGFQ 354
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
VT I+ G AA+TE+G+++ WG + QLG
Sbjct: 355 VTRISLGYYHGAAITEQGQVFSWGRGINGQLG 386
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 31/178 (17%)
Query: 31 PSKVKAL-PVPVAAVSCGGFFTMVLTE--EGQLWNWGANSNYELGRGDRVGGW------- 80
P +V AL + V CG T +T+ E +++WG+N N +LG
Sbjct: 85 PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSS 144
Query: 81 -----KPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGGHGQLGHSFTQNQKVP 134
+P ++ L + +I ++ G HS A +++ G V+ WG G +G+LG+ + P
Sbjct: 145 IQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQEP 204
Query: 135 MVIEALADEF-----VTHIACGGSTSAAV----------TEKGKLYMWGNAKDSQLGV 177
V+E L V I+CG + + A+ T + KL++WGN QLG+
Sbjct: 205 QVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGM 262
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 15/119 (12%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTD--DGKVFSWGYGGHGQLGHSF----------- 127
+P+ + L I Q+ G + +T + VFSWG + +LGHS+
Sbjct: 84 RPERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSS 143
Query: 128 -TQNQKVPMVIEALADEFVTHIACGGSTSAAVT-EKGKLYMWGNAKDSQLGVPGLPVVQ 184
Q K P +++AL ++ + ++CG S S A + E G +Y WG + +LG VVQ
Sbjct: 144 SIQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQ 202
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR 73
S+P KV L +A +S G + LT++G+L+ WG+N +LGR
Sbjct: 446 SLPIKVANLEDNIAQISAGKRHSSALTDDGKLFTWGSNEYGQLGR 490
>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
gi|194695574|gb|ACF81871.1| unknown [Zea mays]
gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 418
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 19/194 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+ WGR+ G G+LGLG G G +S P+KV L + V V+ G ++ +TEEG+
Sbjct: 136 KLFVWGRNSG-GQLGLGKGAGKV----VSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGE 190
Query: 60 LWNWGANSNYELGRGDRVG---------GWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+ +WGA + LG G + + P+L+ N ++I +IA G HS + + G
Sbjct: 191 VLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKG 250
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+F +G + G + P ++E + F +ACGG + VT+ G LY WG+
Sbjct: 251 TLFI--FGQKTEKGFGRPNEEFRPNIVEEIP--FSEEVACGGYHTCVVTDSGDLYSWGSN 306
Query: 171 KDSQLGVPGLPVVQ 184
++ LG+ G +V+
Sbjct: 307 ENGCLGLGGTDMVR 320
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGG--WKPKLLPNL 88
P ++ V VS G + +T +G+L+ WG NS +LG G G P + L
Sbjct: 108 PVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCL 167
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH---------SFTQNQKVPMVIEA 139
D+R+ +A G HS+A+T++G+V SWG G G+LGH S T + P +I+
Sbjct: 168 TDLRVKTVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKN 227
Query: 140 LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+ IA G SA + EKG L+++G + G P
Sbjct: 228 FDGIKIKKIAAGMLHSACIDEKGTLFIFGQKTEKGFGRP 266
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 40 PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG 99
P A+++CGG T+ LT+ G+++ G N +LG G V + + R+++++ G
Sbjct: 65 PPASLACGGAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAG 124
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAA 157
+HS A+T DGK+F WG GQLG + V P ++ L D V +A G S A
Sbjct: 125 NHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIA 184
Query: 158 VTEKGKLYMWGNAKDSQLG 176
VTE+G++ WG A +LG
Sbjct: 185 VTEEGEVLSWGAAGSGRLG 203
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 15/143 (10%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL-PNLV 89
P+ V+ +P V+CGG+ T V+T+ G L++WG+N N LG G P++L +L
Sbjct: 272 PNIVEEIPFS-EEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEILKSSLF 330
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGH------------GQLGHSFTQNQKVPMVI 137
+ + +++ G H+ ++ D +++WG+GG GQLGH + PM++
Sbjct: 331 KLPVSKVSCGWKHTAVVSGD-DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMV 389
Query: 138 EALADEFVTHIACGGSTSAAVTE 160
+ H++CG + + A+ E
Sbjct: 390 PFGTNARAVHVSCGFNHTGAIYE 412
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRI---IQIANGGYHSLALTDDGKVFSWGYGG 119
WG LG G W P + P + +A GG H+L LT +G+VF+ G
Sbjct: 33 WGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQNGRVFATGLND 92
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV-- 177
GQLG + + V + E V ++ G S AVT GKL++WG QLG+
Sbjct: 93 FGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGK 152
Query: 178 -PGLPVVQPCPVE 189
G V P V+
Sbjct: 153 GAGKVVSTPTKVD 165
>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1036
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 86/154 (55%), Gaps = 7/154 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG+++ G+LGLG +S P +++L +P A +S GG + +T G
Sbjct: 157 QVFSWGQNQF-GQLGLG-----MHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D W P LL +L R+I ++ G H+ ALT VF++G GG
Sbjct: 211 VFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
+GQLGH+ T ++ P + L VT I+CG +
Sbjct: 271 YGQLGHNCTNHEINPRKVFELMGNVVTQISCGST 304
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVPV-AAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNL 88
P V AL + AVSCG T+ L ++GQ+++WG SN +LG + + P+ + L
Sbjct: 75 PEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTH 147
DV+I Q+A G +HS AL+ G+VFSWG GQLG + P +I++L
Sbjct: 135 SDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
++ GG+ S A+T G ++ WG K QLG+
Sbjct: 195 LSAGGAHSFAITLSGAVFGWGKNKFGQLGL 224
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG G+LGL N + +P +K L V +A V+CG + + L++ GQ
Sbjct: 104 QVFSWGLG-SNGQLGLN-----NFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQ 157
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG N +LG G P+++ +L + Q++ GG HS A+T G VF WG
Sbjct: 158 VFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG + T+++ P ++++L + V ++CG +AA+T+ ++ +G QLG
Sbjct: 218 KFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLG 275
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V CG T+ L ++G ++ G N +LG KP+ + L I+ ++ G
Sbjct: 36 VCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEK--SRKKPEHVVALDAQIIVAVSCGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
H+LAL D G+VFSWG G +GQLG ++F + +VP I+ L+D + +ACG S A++
Sbjct: 94 SHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALS 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
+ G+++ WG + QLG+
Sbjct: 154 KGGQVFSWGQNQFGQLGL 171
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ R+ + G H++ L DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH +++K P + AL + + ++CG S + A+ +KG+++ WG + QLG+
Sbjct: 64 GQLGHE--KSRKKPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGL 118
>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 683
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 103/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG D EG++GL + +P +V + P++ +SCG + + +T EGQL
Sbjct: 160 ELFMWG-DNSEGQIGL------ENVTNVCVPQQV-TVGKPISWISCGYYHSAFVTTEGQL 211
Query: 61 WNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G +LG ++ V P+ +P + +++Q+A GG H++ LT+ V+++G G
Sbjct: 212 YTFGEPECGKLGLPNQLLVNHRMPQPVPG-IPGKVVQVACGGGHTVVLTEKA-VYTFGLG 269
Query: 119 GHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F VP IE + D+ ++ IACG + +A +T+ G +Y +G+ + +LG+
Sbjct: 270 QFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGL 329
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 99/194 (51%), Gaps = 16/194 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G+
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGK 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII-QIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD L+ R I Q++ G S ALT+DG++F WG
Sbjct: 108 VYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + ++ I+CG SA VT +G+LY +G + +LG+P
Sbjct: 168 SEGQIGLENVTNVCVPQ--QVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLP 225
Query: 179 GLPVV-----QPCP 187
+V QP P
Sbjct: 226 NQLLVNHRMPQPVP 239
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
+SCG T V+T +L+ +G+N+ +LG G + KP + L ++ A G H+
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKG 162
L T+ GKV++ G GQLG T+ + +I + + ++ G +TSAA+TE G
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDG 159
Query: 163 KLYMWGNAKDSQLGVPGLPVV 183
+L+MWG+ + Q+G+ + V
Sbjct: 160 ELFMWGDNSEGQIGLENVTNV 180
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEA-GGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LYT+G E G+LGL PN+ +P V +P V V+CGG T+VLTE+
Sbjct: 210 QLYTFGEPEC-GKLGL-----PNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKA- 262
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ +G +LG G + PK + ++ D +I IA G H+ +TD G ++++G G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Query: 119 GHGQLGHSF--TQNQKVPMVIEALADEFVTHIACGG 152
HG+LG + NQ +P + V ++CGG
Sbjct: 323 RHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGG 358
>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60474380|gb|EAL72317.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2044
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WGR G + P G + +P K+++L V +VS G + G+L
Sbjct: 769 DVYLWGR--GAVKTPAVPILGIPQIEDQLLPFKLESLS-DVVSVSIGFCHGAAVRANGEL 825
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N +LG GD +PK++ +L I Q+ G H++ LT +GKV+SWG +
Sbjct: 826 LTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEY 885
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN-AKDSQLGVPG 179
GQLG PM + AL V IA G + A +T ++ ++GN A V
Sbjct: 886 GQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNGAAMGAASVVS 945
Query: 180 LPVVQP 185
LP + P
Sbjct: 946 LPTLVP 951
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 53 VLTEEGQLWNWGANSNYE-----LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
VLTE G ++ WG + LG P L +L DV + ++ G H A+
Sbjct: 763 VLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDV--VSVSIGFCHGAAVR 820
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
+G++ +WG G +GQLGH T NQ P +I++L ++T + CG + +T+ GK+Y W
Sbjct: 821 ANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSW 880
Query: 168 GNAKDSQLGV 177
G ++ QLG+
Sbjct: 881 GASEYGQLGL 890
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG E G+LGLG + S P +V AL V ++ G VLT +
Sbjct: 876 KVYSWGASE-YGQLGLG------DVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKE 928
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +G + +G V P L+P+L + I ++ G Y + A+T+ G V++WG G
Sbjct: 929 VLVFGNGA--AMGAASVVS--LPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ 984
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+LGH + P +IEAL ++ + I+CGG +A +T+ G+++ G QLG
Sbjct: 985 --ELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLG 1039
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Query: 14 LGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELG 72
L G G A +S+P+ V +L + + + CG + T +TE G ++ WG + ELG
Sbjct: 930 LVFGNGAAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWG--TGQELG 987
Query: 73 RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
G PKL+ L + I QI+ GG H+ LTD G++F+ G GQLG + +Q
Sbjct: 988 HGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQ-MSGDQN 1046
Query: 133 VPMVIEALADEFVTHIACGGSTSAAV 158
P IE+L ++CG + + A+
Sbjct: 1047 KPKRIESLTKTTFISVSCGENYNVAL 1072
>gi|145479297|ref|XP_001425671.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392743|emb|CAK58273.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 19/183 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+TWG + G LG G + G+ +P V VA V G + ++T +G+L+
Sbjct: 15 LFTWG--QSNGSLGYAVG-SQQQVKGVQMPQLVAGFNNNVAQVQMGQNHSALITSDGELY 71
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLV--DVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
WG ++ +LG + P+L+ ++++ Q+A G YH++ALT DG V++WGYGG
Sbjct: 72 TWGTGNSGQLGHNNDKDYNTPQLVEFFTKHNLKVKQVALGDYHTVALTHDGDVWTWGYGG 131
Query: 120 H-------------GQLGHSFTQNQKVPMVIEALAD-EFVTHIACGGSTSAAVTEKGKLY 165
G LGH ++N+ P ++AL + + H+ G + A+ E +LY
Sbjct: 132 KEQNFMMDLLFLQVGALGHGDSKNRYTPTPVKALRTLKKIQHVQSGLRFTNAINENNELY 191
Query: 166 MWG 168
+WG
Sbjct: 192 VWG 194
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 54 LTEEGQLWNWGANSN---YELGRGDRVGGWKPKLLPNLV---DVRIIQIANGGYHSLALT 107
L G L+ WG ++ Y +G +V G + +P LV + + Q+ G HS +T
Sbjct: 9 LFSTGSLFTWGQSNGSLGYAVGSQQQVKGVQ---MPQLVAGFNNNVAQVQMGQNHSALIT 65
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF--VTHIACGGSTSAAVTEKGKLY 165
DG++++WG G GQLGH+ ++ P ++E V +A G + A+T G ++
Sbjct: 66 SDGELYTWGTGNSGQLGHNNDKDYNTPQLVEFFTKHNLKVKQVALGDYHTVALTHDGDVW 125
Query: 166 MWGNAKDSQLGVPGLPVVQ 184
WG Q + L +Q
Sbjct: 126 TWGYGGKEQNFMMDLLFLQ 144
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 25/199 (12%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELYTWG G+LG + N + +K + V V+ G + T+ LT +G +
Sbjct: 69 ELYTWGTGN-SGQLGHNNDKDYNTPQLVEFFTKHN---LKVKQVALGDYHTVALTHDGDV 124
Query: 61 WNWG---ANSNY----------ELGRGDRVGGWKPKLLPNLVDVRIIQ-IANGGYHSLAL 106
W WG N+ LG GD + P + L ++ IQ + +G + A+
Sbjct: 125 WTWGYGGKEQNFMMDLLFLQVGALGHGDSKNRYTPTPVKALRTLKKIQHVQSGLRFTNAI 184
Query: 107 TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-------VTHIACGGSTSAAVT 159
++ +++ WG G +G G ++ +P E D + + + S A+
Sbjct: 185 NENNELYVWGKGDYGVFGDGNNKSYNIPKRNEFFEDYLKKIQNLSIVKLKSCNNYSMALM 244
Query: 160 EKGKLYMWGNAKDSQLGVP 178
G LY WG+ Q+G
Sbjct: 245 SDGHLYGWGSNDFGQMGTK 263
>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
Length = 879
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 69/222 (31%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+LYT+G D G LG G N A S P +V++L + +VSCG + T + E
Sbjct: 205 QLYTFG-DGTFGVLGHG-----NRAS-CSYPKEVESLKGLRTISVSCGVWHTAAVVEVII 257
Query: 57 ------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR------------------ 92
G+L+ WG Y LG GDR KP +P+L+D
Sbjct: 258 SQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDYNFHKAACGHTLTIGLTTSG 317
Query: 93 ----------------------------------IIQIANGGYHSLALTDDGKVFSWGYG 118
++++A G YH LT+ G+V++WG G
Sbjct: 318 HIFTVGSSVYGQLGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKG 377
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
+G+LGH ++KVP ++EAL D V +ACG S +AA+ +
Sbjct: 378 ANGRLGHGDIADRKVPTLVEALRDRSVKRVACGSSFTAAICQ 419
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV---PVAAVSCGGFFTMVLTEE 57
+LYTWG +G GL G G N + IP +V P+ PV+ VSCG + T ++T
Sbjct: 150 DLYTWG--DGTHNAGL-LGHGSNVSHW--IPKRVSG-PLDGLPVSTVSCGTWHTALITSS 203
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G + LG G+R PK + +L +R I ++ G +H+ A+ +
Sbjct: 204 GQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNAS 263
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GK+F+WG G +LGH ++ P I +L D ACG + + +T G ++ G
Sbjct: 264 SGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDYNFHKAACGHTLTIGLTTSGHIFTVG 323
Query: 169 NAKDSQLGVPG 179
++ QLG P
Sbjct: 324 SSVYGQLGNPN 334
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 18/190 (9%)
Query: 1 ELYTWGR-------DEGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVPVAAVSCGGFFTM 52
++Y WG G R PG + + +P +++ + + V+ V+CG
Sbjct: 36 DIYVWGEVICDTISRSGSDRSAYSPGTTTD----VLVPKPLESNVMLDVSYVACGVKHAA 91
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
++T + +++ WG + LG G ++P+L+ +L + IA G +H+ A+T G +
Sbjct: 92 LVTRQSEVFTWGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGEFHTCAVTATGDL 151
Query: 113 FSWGYGGH--GQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKGKLYMWGN 169
++WG G H G LGH + +P + D V+ ++CG +A +T G+LY +G
Sbjct: 152 YTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSTVSCGTWHTALITSSGQLYTFG- 210
Query: 170 AKDSQLGVPG 179
D GV G
Sbjct: 211 --DGTFGVLG 218
>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
[Oxytricha trifallax]
Length = 2049
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 32/201 (15%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
ELY WG G G+G + N + +K K L CGG T+ +T++ +
Sbjct: 1690 ELYIWGSG---GLCGIGTLKQQNAPVKIDFFNKSKIL-----TAVCGGLHTVAVTKDWEA 1741
Query: 61 WNWGANSNYELG------------RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
++WG +LG +GD P+ +P L ++I Q+A G HS+A+T
Sbjct: 1742 YSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGEAHSIAMTK 1801
Query: 109 DGKVFSWGYGGHGQLGHSFT----------QNQKV--PMVIEALADEFVTHIACGGSTSA 156
DG ++ WG +GQLG F+ + KV P I L E ++ I CG + +
Sbjct: 1802 DGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEINGLKHEKISKIICGATFTL 1861
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
T+KG LY G QLG+
Sbjct: 1862 FQTDKGDLYGCGVNDLGQLGL 1882
Score = 79.0 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 19/147 (12%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
+ V CG TMV+ GQ++ WGAN +LG GD P QI + G
Sbjct: 1635 IREVCCGNSHTMVINMSGQVFVWGANQTGQLGLGDN----SP------------QILSAG 1678
Query: 101 Y-HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
Y HS+A+T +++ WG GG +G + Q P+ I+ + CGG + AVT
Sbjct: 1679 YEHSIAITKSNELYIWGSGGLCGIGT--LKQQNAPVKIDFFNKSKILTAVCGGLHTVAVT 1736
Query: 160 EKGKLYMWGNAKDSQLGVPGLPVVQPC 186
+ + Y WG + QLG+P +V+ C
Sbjct: 1737 KDWEAYSWGLTEGGQLGLPQSTIVKLC 1763
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 43/231 (18%)
Query: 1 ELYTWGRDEGEGRLGLGPG------RGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
E Y+WG EG G+LGL +G + + P ++ L + +A V+CG ++
Sbjct: 1740 EAYSWGLTEG-GQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGEAHSIA 1798
Query: 54 LTEEGQLWNWGANSNYELGRG------------DRVGGWKPKLLPNLVDVRIIQIANGGY 101
+T++G ++ WG ++ +LG G ++ ++P+ + L +I +I G
Sbjct: 1799 MTKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEINGLKHEKISKIICGAT 1858
Query: 102 HSLALTDDGKVFSWGYGGHGQLG--------------------HSFTQNQKVPMVIEALA 141
+L TD G ++ G GQLG H+ T + +P +
Sbjct: 1859 FTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGKHNQTSDVILPTRVICFQ 1918
Query: 142 DEFVTHIACGGSTSAAVTEKG--KLYMWGNAKDSQLGVPGLPV-VQPCPVE 189
+ IACG S S AV+ G L+ WG K+ QLG+ + + + P PV+
Sbjct: 1919 GIAIHQIACGESHSLAVSGDGMNMLWAWGMFKNGQLGLGEVTMKLNPRPVQ 1969
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 2 LYTWGRDEGEGRLGLG-------PGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
+Y WG+ G+LGLG PG G E + P ++ L ++ + CG FT+
Sbjct: 1805 IYGWGQSN-YGQLGLGFSGDSFEPGLG-MEKSKVYEPQEINGLKHEKISKIICGATFTLF 1862
Query: 54 LTEEGQLWNWGANSNYELGRG-----------DRVGGWKPK-----LLPNLV----DVRI 93
T++G L+ G N +LG ++V K +LP V + I
Sbjct: 1863 QTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGKHNQTSDVILPTRVICFQGIAI 1922
Query: 94 IQIANGGYHSLALTDDGK--VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
QIA G HSLA++ DG +++WG +GQLG + P +++L + IACG
Sbjct: 1923 HQIACGESHSLAVSGDGMNMLWAWGMFKNGQLGLGEVTMKLNPRPVQSLCSSQIQRIACG 1982
Query: 152 GSTSAAV 158
S A+
Sbjct: 1983 SMHSVAL 1989
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 23 NEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ--LWNWGANSNYELGRGDRVGG 79
N+ + +P++V + + ++CG ++ ++ +G LW WG N +LG G+
Sbjct: 1903 NQTSDVILPTRVICFQGIAIHQIACGESHSLAVSGDGMNMLWAWGMFKNGQLGLGEVTMK 1962
Query: 80 WKPKLLPNLVDVRIIQIANGGYHSLALTDD 109
P+ + +L +I +IA G HS+AL D
Sbjct: 1963 LNPRPVQSLCSSQIQRIACGSMHSVALIGD 1992
Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 12/80 (15%)
Query: 110 GKVFSWGYGGHGQLG----------HSFTQNQKV--PMVIEALADEFVTHIACGGSTSAA 157
G +FS G +GQLG S T + KV P +I +L DE + + CG S +
Sbjct: 1588 GILFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKVLYPRMIISLKDEVIREVCCGNSHTMV 1647
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
+ G++++WG + QLG+
Sbjct: 1648 INMSGQVFVWGANQTGQLGL 1667
>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 754
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 12/175 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG +E G+LG + + L +P + K+L V A++ G ++ L ++G +W
Sbjct: 318 IWAWGDNE-WGQLG------NSISEKLCVPVQFKSLK-DVVAIAAGCEHSLALKKDGTVW 369
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG N +LG G+ + + P + L DV + IA G HSLAL DG V++WG G
Sbjct: 370 SWGNNYYGQLGNGNSIDSYVPVQVRGLKDV--VAIATGNAHSLALKKDGTVWAWGNNEFG 427
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
QLG+ ++ VP+ ++ L D V IA G S A + G ++ WGN + QLG
Sbjct: 428 QLGNGTNKSSFVPVQVKGLKD--VVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLG 480
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 8/170 (4%)
Query: 20 RGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGG 79
RG +E +P +V+ L V A++ G + ++ L ++G +W WG N +LG G
Sbjct: 231 RGADEYS--PVPVQVEGLK-DVVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDS 287
Query: 80 WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA 139
+ P + NL DV + IA G HSLAL DG +++WG GQLG+S ++ VP+ ++
Sbjct: 288 YDPVQVKNLKDV--VAIAAGENHSLALKKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKS 345
Query: 140 LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
L D V IA G S A+ + G ++ WGN QLG G + PV+
Sbjct: 346 LKD--VVAIAAGCEHSLALKKDGTVWSWGNNYYGQLG-NGNSIDSYVPVQ 392
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Query: 28 LSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNY--ELGRGDRVGGWKPKLL 85
S+P ++K L V A++ G +++ L ++G +W W NY +L RG P +
Sbjct: 185 FSVPFQIKGLK-DVVAIAAGKDYSLALKKDGTVWMWEYKYNYYEQLRRGADEYSPVPVQV 243
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFV 145
L DV + IA G YHSLAL DG V++WG +GQLG+ +++ P+ ++ L D V
Sbjct: 244 EGLKDV--VAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKD--V 299
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
IA G + S A+ + G ++ WG+ + QLG
Sbjct: 300 VAIAAGENHSLALKKDGTIWAWGDNEWGQLG 330
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 15/168 (8%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
S+P ++K L V A++ G ++ L ++G +W WG N +LG R K L+P
Sbjct: 591 SVPVQIKGLK-DVVAIAAGEHHSLGLKKDGTVWAWGDNFFGQLGNSPRE---KYSLVP-- 644
Query: 89 VDVR----IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK---VPMVIEALA 141
V V+ I+ IA G +HSLA+ DG V++WG GQLG+ + K VP+ ++ +
Sbjct: 645 VQVKGLKDILAIATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVPVQVKGIK 704
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
D V I+ G S A+ + G ++ WG QLG G V PV+
Sbjct: 705 D--VLAISAGSYHSLALKKDGTVWGWGANARGQLGNGGAGVYSTVPVQ 750
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 20/193 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG +E G+LG G + +P +VK L V A++ G ++ ++G +W
Sbjct: 418 VWAWGNNE-FGQLGNGTNKSS------FVPVQVKGLK-DVVAIAAGSDHSLAFKKDGTVW 469
Query: 62 NWGANSNYELGRGDRVGGW-----KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
WG N +LG G GG+ P + L DV + +A G HSLAL DG +++WG
Sbjct: 470 AWGNNEFGQLGNGS--GGYGQYYAVPVQVKGLKDV--VAVAAGSVHSLALKKDGTIWAWG 525
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
HG LG+ + VP+ ++ L D V IA G + S + + G ++ WG L
Sbjct: 526 SNYHGLLGNDI-ERSFVPVQVKGLKD--VVAIAAGSNHSLVLKKDGTVWAWGEVWFDLLN 582
Query: 177 VPGLPVVQPCPVE 189
V PV+
Sbjct: 583 ENSRLVYSSVPVQ 595
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK--PKLLPN 87
IP KVK L V A++ G + ++ L ++G +W WG+N + +LG D G + P +
Sbjct: 86 IPVKVKGLK-DVVAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGNRD-AGEYSIVPVQVKG 143
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTH 147
L DV + IA G +SL L DG V+ WG Q+ ++ VP I+ L D V
Sbjct: 144 LKDV--VAIAAGDGYSLGLKKDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLKD--VVA 199
Query: 148 IACGGSTSAAVTEKGKLYMW 167
IA G S A+ + G ++MW
Sbjct: 200 IAAGKDYSLALKKDGTVWMW 219
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF 144
L + ++ IIQIA G YHSLAL DG V++WG+ GQ G ++ +P+ ++ L D
Sbjct: 40 LLSKLENNIIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGTE--ESSIIPVKVKGLKD-- 95
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
V IA G S + + G ++ WG+ KD QLG PV+
Sbjct: 96 VVAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQ 140
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG D G+LG P E L +P +VK L + A++ G + ++ + ++G +W
Sbjct: 621 VWAWG-DNFFGQLG----NSPREKYSL-VPVQVKGLK-DILAIATGEWHSLAIKKDGTVW 673
Query: 62 NWGANSNYELGR---GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
WG NS +LG G + P + + DV + I+ G YHSLAL DG V+ WG
Sbjct: 674 AWGENSTGQLGNETSGKDKYSYVPVQVKGIKDV--LAISAGSYHSLALKKDGTVWGWGAN 731
Query: 119 GHGQLGH 125
GQLG+
Sbjct: 732 ARGQLGN 738
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 37 LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQI 96
L + ++ G + ++ L +G +W WG N + G + P + L DV + I
Sbjct: 44 LENNIIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGTEES--SIIPVKVKGLKDV--VAI 99
Query: 97 ANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADEFVTHIACGGSTS 155
A G YHSL L DG V++WG GQLG+ + VP+ ++ L D V IA G S
Sbjct: 100 AAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGLKD--VVAIAAGDGYS 157
Query: 156 AAVTEKGKLYMWG 168
+ + G ++ WG
Sbjct: 158 LGLKKDGTVWCWG 170
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG G KP+L+ L I+ +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESE--GSKPELIGALAGQHIVHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HS+AL+D G+VFSWG G GQLG + ++ VP +I+ L + + I+CG A+
Sbjct: 94 SHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGQNSYGQLGL 171
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG +G+LGL +++P +K L + +SCG + + L +GQ
Sbjct: 104 QVFSWGAG-SDGQLGLTTIED-----AVTVPRLIKKLNQQTILQISCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 SSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +VK+L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGQN-SYGQLGLGK-ECPSQAS----PQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG NS+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L V+ IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 98/180 (54%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG +E+ G S P + AL + V+CG ++ L+++GQ
Sbjct: 54 EVYTCGLN-TKGQLG-------HESEG-SKPELIGALAGQHIVHVACGESHSVALSDQGQ 104
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WGA S+ +LG P+L+ L I+QI+ G +H LAL DG+ F+WG
Sbjct: 105 VFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQN 164
Query: 119 GHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG +Q P +++L + +A GG+ S A++ G ++ WG QLG+
Sbjct: 165 SYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGL 224
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 64/100 (64%), Gaps = 2/100 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH ++ K P +I AL
Sbjct: 24 EPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE-SEGSK-PELIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
A + + H+ACG S S A++++G+++ WG D QLG+ +
Sbjct: 82 AGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTI 121
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 24/177 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WG++ G+LGL R P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGKNSS-GQLGLSDERDRES------PCHVKLLRSQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G +H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323
Query: 120 HGQLGHSFTQNQKVPMVI---------------EALADEFVTHIACGGSTSAAVTEK 161
GQLG T N K P + +A V HI GG + + K
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHIFSGGDQTFVLCSK 380
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ- 59
+ +WGR E +G+LG G +A +P + AL +++++CG T +E +
Sbjct: 35 VCSWGRGE-DGQLGHG------DAEERHLPLVISALDDCEISSITCGADHTTARSESTRT 87
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG LG G+ + P+ + L + I QIA G H LA+T DG+V SWG
Sbjct: 88 VYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQ 147
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG T++ VP + A V +A G +AAVTE GKLY WG + LG+
Sbjct: 148 NGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGL 205
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 96/181 (53%), Gaps = 16/181 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + +P +V A+P + V+CG T+ + G
Sbjct: 191 KLYGWGWGR-YGNLGLG------DRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGN 243
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDV---RIIQIANGGY-HSLALTDDGKVFSW 115
L+ +G + +LG GD ++ L+P+ V + IQ +GG+ H++AL +DG+++ W
Sbjct: 244 LYTFGWSKYGQLGHGD----FEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGW 299
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G+ GQ+G T + P +I + +E VT + CG + A+T++G +Y WG QL
Sbjct: 300 GWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQL 359
Query: 176 G 176
G
Sbjct: 360 G 360
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 8/176 (4%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG + GRLG G + L IP +K L + + ++CG + +T +G++
Sbjct: 88 VYSWGWGD-FGRLGHG------NSSDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGEV 140
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+WG N N +LG G P + + + +A G H+ A+T+ GK++ WG+G +
Sbjct: 141 HSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRY 200
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G LG ++ VP + A+ E + +ACG + AV G LY +G +K QLG
Sbjct: 201 GNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLG 256
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
Query: 30 IPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P +V+AL + AVS G T+ L E+G+L+ WG N ++G G+ PKL+ +
Sbjct: 265 VPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGI 324
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
V+ ++ ++ G H++A+TD G V+SWG G GQLGH ++ VP IE L+ + +
Sbjct: 325 VNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIELLSADG---L 381
Query: 149 ACGGSTSA 156
AC G S+
Sbjct: 382 ACQGIESS 389
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V +VS G T+ L + +WG + +LG GD P ++ L D I I G
Sbjct: 16 VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGA 75
Query: 101 YHSLALTDDGK-VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
H+ A ++ + V+SWG+G G+LGH + + +P I+ L + IACG S A+T
Sbjct: 76 DHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGDSHCLAIT 135
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+++ WG ++ QLG+
Sbjct: 136 GDGEVHSWGRNQNGQLGL 153
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
R+I ++ G H++AL V SWG G GQLGH + + +P+VI AL D ++ I CG
Sbjct: 15 RVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCG 74
Query: 152 GSTSAAVTEKGK-LYMWGNAKDSQLG 176
+ A +E + +Y WG +LG
Sbjct: 75 ADHTTARSESTRTVYSWGWGDFGRLG 100
>gi|357502467|ref|XP_003621522.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355496537|gb|AES77740.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 476
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 12/139 (8%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG--------DRVGGWKPKLLPNLVD-V 91
+ VSCG + L+E+G L WG N +LGRG R+ K L + V
Sbjct: 169 IKQVSCGAVHVVALSEDGLLQAWGYNEQGQLGRGVTCEGLQGARIISSYAKFLDEAPELV 228
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ---NQKVPMVIEALADEFVTHI 148
+I +++ G YH+ A++D G+V++WG G GQLGH+ Q + +P + +L F+
Sbjct: 229 KITRVSCGEYHTAAISDKGEVYTWGLGNMGQLGHTSLQYGDKELIPRRVVSLDSIFIKDA 288
Query: 149 ACGGSTSAAVTEKGKLYMW 167
ACGG + A+T++G LY W
Sbjct: 289 ACGGVHTCALTQEGALYAW 307
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWK-PKLLPNLV-------DVRIIQIANGGYHSLA 105
+ + ++ WG N + + GR ++ + PK LP + + R + IA G H+ A
Sbjct: 17 IPRKSAIYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHTAA 76
Query: 106 LTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE----- 160
+ DG +F+WG GQLG + +K P ++ L EFV +ACG SA + E
Sbjct: 77 IASDGLLFTWGANEFGQLGDGTEERRKHPKKVKQLESEFVKSVACGAHCSACIAEPREND 136
Query: 161 ----KGKLYMWGNAKDSQL 175
G+L++WG + S L
Sbjct: 137 GTVSTGRLWVWGQNQGSNL 155
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 75/199 (37%), Gaps = 62/199 (31%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKL------------------- 84
++CG T + +G L+ WGAN +LG G PK
Sbjct: 67 IACGREHTAAIASDGLLFTWGANEFGQLGDGTEERRKHPKKVKQLESEFVKSVACGAHCS 126
Query: 85 ----------------------------LPNLV------DVRIIQIANGGYHSLALTDDG 110
LP L + I Q++ G H +AL++DG
Sbjct: 127 ACIAEPRENDGTVSTGRLWVWGQNQGSNLPRLFWGAFEPNTTIKQVSCGAVHVVALSEDG 186
Query: 111 KVFSWGYGGHGQLGHSFT----QNQKVPMVIEALADEF-----VTHIACGGSTSAAVTEK 161
+ +WGY GQLG T Q ++ DE +T ++CG +AA+++K
Sbjct: 187 LLQAWGYNEQGQLGRGVTCEGLQGARIISSYAKFLDEAPELVKITRVSCGEYHTAAISDK 246
Query: 162 GKLYMWGNAKDSQLGVPGL 180
G++Y WG QLG L
Sbjct: 247 GEVYTWGLGNMGQLGHTSL 265
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 26/188 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-----VPVAAVSCGGFFTMVLTE 56
L WG +E +G+LG G G I S K L V + VSCG + T +++
Sbjct: 188 LQAWGYNE-QGQLGRGV-TCEGLQGARIISSYAKFLDEAPELVKITRVSCGEYHTAAISD 245
Query: 57 EGQLWNWGANSNYELGRGDRVGGWK---PKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
+G+++ WG + +LG G K P+ + +L + I A GG H+ ALT +G ++
Sbjct: 246 KGEVYTWGLGNMGQLGHTSLQYGDKELIPRRVVSLDSIFIKDAACGGVHTCALTQEGALY 305
Query: 114 SWGYGGHGQL-------------GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
+WG G GQL S T + +P+++ + V +ACG S +
Sbjct: 306 AWGGGQSGQLGLGPDTGLFSCIPNDSRTFFRNIPVLV---VPKGVQLVACGHSHTLICMR 362
Query: 161 KGKLYMWG 168
G+++ WG
Sbjct: 363 DGRIHGWG 370
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
E+YTWG G +G IP +V +L + + +CGG T LT+EG
Sbjct: 248 EVYTWGL----GNMGQLGHTSLQYGDKELIPRRVVSLDSIFIKDAACGGVHTCALTQEGA 303
Query: 60 LWNWGANSNYELGRGDRVGGWKP---------KLLPNLVDVRIIQ-IANGGYHSLALTDD 109
L+ WG + +LG G G + + +P LV + +Q +A G H+L D
Sbjct: 304 LYAWGGGQSGQLGLGPDTGLFSCIPNDSRTFFRNIPVLVVPKGVQLVACGHSHTLICMRD 363
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
G++ WGY +GQ + + P ++ E V +A GG SA +T+ L
Sbjct: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLTDAFSL 417
>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
tuberosum]
Length = 951
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP--VPVAAVSCGGFFTMVLTEEG 58
+LYTWG +G GL G IP KV L + V+ VSCG + T ++T G
Sbjct: 380 DLYTWG--DGAKSSGL---LGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTALITSAG 434
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---------- 108
+L+ +G + LG GDR G P+ + ++ +++A G +H+ A+ +
Sbjct: 435 RLFTFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAAVVELMSGLDSRPS 494
Query: 109 ---DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
G +F+WG G G+LGH + + P I AL D+ + +AC + + A+T G++Y
Sbjct: 495 DAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVALTTTGRVY 554
Query: 166 MWGNAKDSQLGVPGLPVVQPCPVE 189
G+ QLG P + P VE
Sbjct: 555 TMGSNVYGQLGCPLANGMSPICVE 578
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 92/176 (52%), Gaps = 14/176 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
L+TWG D +G+LG G + P A P + AL + V+C T+ LT G++
Sbjct: 501 LFTWG-DGDKGKLGHGDNK-PRLA-----PQCITALVDKSFSEVACSYAMTVALTTTGRV 553
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ G+N +LG G P + + LVD + +I+ G +H LT +V++WG G
Sbjct: 554 YTMGSNVYGQLG-CPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYTWGKGE 612
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+GQLGH +N+ P +++ L D+ V I CG + SAA+ ++ W + D+ +
Sbjct: 613 NGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSNFSAAIC----VHNWALSADNSI 664
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
+ V +SCG M++T++G+ ++WG + LG G PKL+ N + + IA
Sbjct: 308 LDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIAC 367
Query: 99 GGYHSLALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTS 155
G YHS A+T G +++WG G G LGH + +P + L + V+H++CG +
Sbjct: 368 GEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHT 427
Query: 156 AAVTEKGKLYMWGN 169
A +T G+L+ +G+
Sbjct: 428 ALITSAGRLFTFGD 441
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 21/190 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
L+T+G D G LG G + G P +V+ + V+CG + T + E
Sbjct: 435 RLFTFG-DGTFGALGHG------DRSGCITPREVETFNGLKTLKVACGVWHTAAVVELMS 487
Query: 57 ----------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
G L+ WG +LG GD P+ + LVD ++A ++AL
Sbjct: 488 GLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVAL 547
Query: 107 TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
T G+V++ G +GQLG V + L D V I+CG A +T + ++Y
Sbjct: 548 TTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYT 607
Query: 167 WGNAKDSQLG 176
WG ++ QLG
Sbjct: 608 WGKGENGQLG 617
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 74 GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV 133
G R+ PK L + V + + I+ G H++ +T G+ FSWG G+LGH +
Sbjct: 291 GTRIDANTPKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSH 350
Query: 134 PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN-AKDSQL 175
P +I+ V IACG S AVT G LY WG+ AK S L
Sbjct: 351 PKLIKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGL 393
>gi|6957714|gb|AAF32458.1| hypothetical protein [Arabidopsis thaliana]
Length = 314
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 97/177 (54%), Gaps = 19/177 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
++TWG ++ G LG P E +IPS+VKAL V + + GG+ + + ++G+
Sbjct: 64 MFTWGWNQ-RGTLGHQP-----ETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRA 117
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + D +G L +VR+I + G +H+LAL +DG++ +WG +
Sbjct: 118 YAWGKRMPFHT-LSDLLG---------LENVRLIAV--GAFHNLALEEDGRLLAWGNNEY 165
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG TQ P+ ++ L D + IA GG S A+T+KG++Y WG + +LG+
Sbjct: 166 GQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGL 222
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V ++ G F + L E+G+L WG N +LG GD P + L D+ ++ IA GG
Sbjct: 138 VRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGG 197
Query: 101 YHSLALTDDGKVFSWGYGGHGQ--LGHSFTQNQKVPMVIEALADEFVTHIACG 151
+HS ALTD G+V+ WG G HG+ LG + ++ VP + LA+E + G
Sbjct: 198 WHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQFGRG 250
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS-FTQNQKVPMVIEALADEFVTHIACG 151
+ + +G +SLA+ DDG +F+WG+ G LGH T+ + +P ++ALA+ +T A G
Sbjct: 45 VRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIG 104
Query: 152 GSTSAAVTEKGKLYMWGN 169
G AV ++G+ Y WG
Sbjct: 105 GWHCLAVDDQGRAYAWGK 122
>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Nomascus leucogenys]
Length = 984
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 13/180 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG +P ++AL + V VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRRGAPRG-------ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L ++IIQ++ G YHSLAL+ D +VFSWG HGQ
Sbjct: 102 GSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPV 182
LG F +Q P + +L + +A GG+ S A++ G + WG+ QL + G V
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV 220
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKN-SHGQLGLG-KEFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR V KP + L ++ ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQL 175
GQLG+S T ++ P ++E + D V+ + CG T A V G++ +G+ S
Sbjct: 262 DNRSGQLGYSPTPEKRGPQLVE-IIDGLVSQVDCGSYHTLAYVHTTGQVVSFGHGP-SDT 319
Query: 176 GVPGLP 181
G P P
Sbjct: 320 GKPTHP 325
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG + P I L + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WGA+S EL R G +LL Q A+G HSL L + +V S G
Sbjct: 3 FCWGADSR-ELQRRRTEGSPGAELL---------QAASGERHSLLLLTNHRVLSCGDNSR 52
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLG ++P I+AL V ++CG S AV KG+++ WG + QLG+ L
Sbjct: 53 GQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEL 112
Query: 181 PVVQPCP 187
+ P
Sbjct: 113 KEISFTP 119
>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Nomascus leucogenys]
Length = 1020
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 13/180 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG +P ++AL + V VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRRGAPRG-------ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L ++IIQ++ G YHSLAL+ D +VFSWG HGQ
Sbjct: 102 GSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPV 182
LG F +Q P + +L + +A GG+ S A++ G + WG+ QL + G V
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV 220
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKN-SHGQLGLG-KEFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR V KP + L ++ ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQL 175
GQLG+S T ++ P ++E + D V+ + CG T A V G++ +G+ S
Sbjct: 262 DNRSGQLGYSPTPEKRGPQLVE-IIDGLVSQVDCGSYHTLAYVHTTGQVVSFGHGP-SDT 319
Query: 176 GVPGLP 181
G P P
Sbjct: 320 GKPTHP 325
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG + P I L + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WGA+S EL R G +LL Q A+G HSL L + +V S G
Sbjct: 3 FCWGADSR-ELQRRRTEGSPGAELL---------QAASGERHSLLLLTNHRVLSCGDNSR 52
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
GQLG ++P I+AL V ++CG S AV KG+++ WG + QLG+ L
Sbjct: 53 GQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEL 112
Query: 181 PVVQPCP 187
+ P
Sbjct: 113 KEISFTP 119
>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
trifallax]
Length = 546
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 87/152 (57%), Gaps = 10/152 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E++++GR++ G+LG+ G +S+P +VK L ++CG + T+ + GQL
Sbjct: 191 EIFSFGRNDS-GQLGI-----TGSDGNISLPKEVKNLKS--TQIACGYYHTVAINN-GQL 241
Query: 61 WNWGANSNYELGRGDRVGG-WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++WG N + +LG G P L+ +L D I+ +A G YH+LAL G++FS+G
Sbjct: 242 YSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNS 301
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
HGQLG T N P++I+ L D+ V IA G
Sbjct: 302 HGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAG 333
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 101/179 (56%), Gaps = 14/179 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+ GR++ G+LGLG N P+ ++AL + ++ CG + ++V + +G+
Sbjct: 139 EIYSCGRND-YGQLGLGNLDDKNS------PTLIEALNGKRIVSIGCGQYHSVVSSIDGE 191
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++++G N + +LG G PK + NL + QIA G YH++A+ ++G+++SWG
Sbjct: 192 IFSFGRNDSGQLGITGSDGNISLPKEVKNL---KSTQIACGYYHTVAI-NNGQLYSWGKN 247
Query: 119 GHGQLGHS-FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG ++ + +P ++ L D+ + +ACG + A+ G+L+ +G QLG
Sbjct: 248 DSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLG 306
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 11 EGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMV-LTEEGQLWNWGANSN 68
+G+LG G N P +V+AL V AV C + T+ +E ++++ G N
Sbjct: 95 KGQLGHGDQTSINS------PKQVEALSRKFVTAVGCSYYHTIFSCADEMEIYSCGRNDY 148
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+ P L+ L RI+ I G YHS+ + DG++FS+G GQLG + +
Sbjct: 149 GQLGLGNLDDKNSPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGS 208
Query: 129 Q-NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
N +P ++ L T IACG + A+ G+LY WG QLG+
Sbjct: 209 DGNISLPKEVKNLKS---TQIACGYYHTVAIN-NGQLYSWGKNDSGQLGI 254
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 64/109 (58%), Gaps = 7/109 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY+WG+++ G+LG+G +P+ V+ L + +V+CG + T+ L GQ
Sbjct: 240 QLYSWGKNDS-GQLGIGIYSAKE-----ILPTLVRDLEDQEIVSVACGCYHTLALGYAGQ 293
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
L+++G NS+ +LG G KP L+ L+D ++ QIA G YHS+ L +
Sbjct: 294 LFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFYHSIVLAN 342
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPG-------RGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMV 53
++Y+ G +E L GP G L + K++ + S G +
Sbjct: 21 DVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLRGKNIVKIFASNGCEHVIA 80
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSL-ALTDDGKV 112
LT G+++++G N +LG GD+ PK + L + + YH++ + D+ ++
Sbjct: 81 LTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSRKFVTAVGCSYYHTIFSCADEMEI 140
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
+S G +GQLG ++ P +IEAL + + I CG S + G+++ +G
Sbjct: 141 YSCGRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDS 200
Query: 173 SQLGVPG 179
QLG+ G
Sbjct: 201 GQLGITG 207
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 18/158 (11%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGAN-------------SNYELGRGDRVGGWKPKLL 85
+ V V+ G T++LT+ G +++ G N S R G + KL+
Sbjct: 1 MNVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTG--QLKLV 58
Query: 86 PNLVDVRIIQI--ANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
L I++I +NG H +ALT++GKVFS+G+ GQLGH + P +EAL+ +
Sbjct: 59 EKLRGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSRK 118
Query: 144 FVTHIACG-GSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
FVT + C T + ++ ++Y G QLG+ L
Sbjct: 119 FVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNL 156
>gi|302804628|ref|XP_002984066.1| hypothetical protein SELMODRAFT_40379 [Selaginella moellendorffii]
gi|300148418|gb|EFJ15078.1| hypothetical protein SELMODRAFT_40379 [Selaginella moellendorffii]
Length = 1023
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL++WG + +LG G AG +P +V+ L + VS F + + GQ
Sbjct: 128 ELFSWG-NGSNYQLGTG------TAGIQRVPCRVETLHGADIVRVSAAKFHSTAVNSSGQ 180
Query: 60 LWNWGANSNYELGRGD---RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WG LG D V P+ + L R+ +A +H++ T+ G+V++WG
Sbjct: 181 LFSWGYGRGGRLGHEDYSGEVAVIAPRQVTGLCGRRVKNVAAAKHHTIVATEGGEVYTWG 240
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG+ Q P + L + V +A SAAVTE G++Y WG KD QLG
Sbjct: 241 TNREGQLGYPAVDTQSTPRRVSTLRAKVV-EVAAANKHSAAVTESGEVYTWGCNKDGQLG 299
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+L++WG SNY+LG G P + L I++++ +HS A+ G++FSWGYG
Sbjct: 128 ELFSWGNGSNYQLGTGTAGIQRVPCRVETLHGADIVRVSAAKFHSTAVNSSGQLFSWGYG 187
Query: 119 GHGQLGHSFTQNQKV---PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
G+LGH + P + L V ++A + TE G++Y WG ++ QL
Sbjct: 188 RGGRLGHEDYSGEVAVIAPRQVTGLCGRRVKNVAAAKHHTIVATEGGEVYTWGTNREGQL 247
Query: 176 GVPGL 180
G P +
Sbjct: 248 GYPAV 252
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 13/174 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSI--PSKVKALP-VPVAAVSCGGFFTMVLTEE 57
+L++WG G GRLG + +G +++ P +V L V V+ T+V TE
Sbjct: 180 QLFSWGYGRG-GRLG-----HEDYSGEVAVIAPRQVTGLCGRRVKNVAAAKHHTIVATEG 233
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N +LG P+ + L +++++A HS A+T+ G+V++WG
Sbjct: 234 GEVYTWGTNREGQLGYPAVDTQSTPRRVSTL-RAKVVEVAAANKHSAAVTESGEVYTWGC 292
Query: 118 GGHGQLGH--SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
GQLG+ S + + VP V++ L I+ + + E +++ WG+
Sbjct: 293 NKDGQLGYGTSNSASNCVPRVVDYLKGRKALAISAAKRHTVVIVET-EVFTWGH 345
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVA-AVSCGGFFTMVLTEEGQ 59
E+YTWG ++ +G+LG G N A +P V L A A+S T+V+ E +
Sbjct: 286 EVYTWGCNK-DGQLGYGTS---NSASNC-VPRVVDYLKGRKALAISAAKRHTVVIVET-E 339
Query: 60 LWNWG----ANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
++ WG + L R + G P + I+ +A G HS A+ DG +FSW
Sbjct: 340 VFTWGHKMVSPRRVVLVRNTKKAGQHPLKFHLSERLHIVAVAAGVVHSTAIAADGLIFSW 399
Query: 116 GYGG---HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
H Q + T + V ++ G +A T G +Y W + K
Sbjct: 400 LSADPQLHAQQVLTMTGHHAV-------------SVSAGKYRTAVATSTGDVYAWDSDKS 446
Query: 173 S 173
S
Sbjct: 447 S 447
>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
Length = 418
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 19/193 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+ WGR+ G G+LGLG G G +S P+KV L + V+ G ++ +TEEG+
Sbjct: 138 KLFVWGRNSG-GQLGLGKGAGKV----VSTPTKVDCLTDFRIKMVALGSEHSIAVTEEGE 192
Query: 60 LWNWGANSNYELGRGDR---------VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+ +WGA + LG G + + P+L+ N ++I +IA G HS + + G
Sbjct: 193 VLSWGAAGSGRLGHGRQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKG 252
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+F +G G S P ++E + F +ACGG + VT+ G LY WG+
Sbjct: 253 TLFIFGQKTEKGFGRS--NEAFRPNIVEEIP--FSEEVACGGYHTCVVTDSGDLYSWGSN 308
Query: 171 KDSQLGVPGLPVV 183
++ LG+ G +V
Sbjct: 309 ENGCLGLGGTDMV 321
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGG--WKPKLLPNL 88
P +V V VS G + +T +G+L+ WG NS +LG G G P + L
Sbjct: 110 PVEVSGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCL 169
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH---------SFTQNQKVPMVIEA 139
D RI +A G HS+A+T++G+V SWG G G+LGH S T ++ P +I+
Sbjct: 170 TDFRIKMVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTTSEYTPRLIKN 229
Query: 140 LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ IA G SA + EKG L+++G + G
Sbjct: 230 FDGIKIKKIAAGMLHSACIDEKGTLFIFGQKTEKGFG 266
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 40 PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG 99
P A+++CGG T+ LT+ G+++ G N +LG G V + + R+++++ G
Sbjct: 67 PPASLACGGAHTLFLTQSGRVFATGLNDFGQLGVGSSVTHTLEPVEVSGFHERVVEVSAG 126
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAA 157
+HS A+T DGK+F WG GQLG + V P ++ L D + +A G S A
Sbjct: 127 NHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIA 186
Query: 158 VTEKGKLYMWGNAKDSQLG 176
VTE+G++ WG A +LG
Sbjct: 187 VTEEGEVLSWGAAGSGRLG 205
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 15/143 (10%)
Query: 31 PSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL-PNLV 89
P+ V+ +P V+CGG+ T V+T+ G L++WG+N N LG G P++L +L
Sbjct: 274 PNIVEEIPFS-EEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVCSPEILKSSLF 332
Query: 90 DVRIIQIANGGYHSLALTDDGKVFSWGYGGH------------GQLGHSFTQNQKVPMVI 137
+ + +++ G H+ ++ D +++WG+GG GQLGH + PM++
Sbjct: 333 KLPVSKVSCGWKHTAVISGD-DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMV 391
Query: 138 EALADEFVTHIACGGSTSAAVTE 160
+ H++CG + + A+ E
Sbjct: 392 PFGKNARAVHVSCGFNHTGAIYE 414
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRI---IQIANGGYHSLALTDDGKVFSWGYGG 119
WG LG G W P + P + +A GG H+L LT G+VF+ G
Sbjct: 35 WGNGDYGRLGLGVLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQSGRVFATGLND 94
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV-- 177
GQLG + + V + E V ++ G S AVT GKL++WG QLG+
Sbjct: 95 FGQLGVGSSVTHTLEPVEVSGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGK 154
Query: 178 -PGLPVVQPCPVE 189
G V P V+
Sbjct: 155 GAGKVVSTPTKVD 167
>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
Length = 1104
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 21/204 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
+LYTWG +G GL G G NE IP K+ P + V++++CG + T V+T
Sbjct: 380 DLYTWG--DGTYNFGL-LGHG-NEVSHW-IPKKING-PLEGIHVSSIACGPWHTAVVTSA 433
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G + LG GDR P+ + +L +R ++ A G +H+ A+ +
Sbjct: 434 GQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 493
Query: 109 ---DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
GK+F+WG G G+LGH + + VP + AL D ++CG S + A+T G +Y
Sbjct: 494 NCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVALTTSGHVY 553
Query: 166 MWGNAKDSQLGVPGLPVVQPCPVE 189
G+ QLG P P VE
Sbjct: 554 TMGSPVYGQLGNPHADGKVPVRVE 577
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+L+TWG D +GRLG G + +P+ V AL P VSCG T+ LT G
Sbjct: 499 KLFTWG-DGDKGRLGHG------DKETKLVPTCVAALVDPNFCRVSCGHSMTVALTTSGH 551
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+ +LG G ++ L + +IA G YH LT +V++WG G
Sbjct: 552 VYTMGSPVYGQLGNPHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGA 611
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+G+LGH T ++ P ++EAL D+ V IACG + +AA+ L+ W + D +
Sbjct: 612 NGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGFDQSM 663
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 22/190 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + G +++P +V++L + +CG + T + E
Sbjct: 435 QLFTFG-DGTFGVLGHG------DRGSVTMPREVESLKGLRTVRAACGVWHTAAVVEVMV 487
Query: 57 ---------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+L+ WG LG GD+ P + LVD +++ G ++ALT
Sbjct: 488 GSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVALT 547
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYM 166
G V++ G +GQLG+ + KVP+ +E L+ FV IACG A +T + ++Y
Sbjct: 548 TSGHVYTMGSPVYGQLGNPHA-DGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYT 606
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 607 WGKGANGRLG 616
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
A+ + V ++CGG ++T++G+++ WG S LG G +PKL+ L + I
Sbjct: 305 AVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALGNTNIEL 364
Query: 96 IANGGYHSLALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIEA-LADEFVTHIACGG 152
++ G YH+ A+T G +++WG G + G LGH + +P I L V+ IACG
Sbjct: 365 VSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACGP 424
Query: 153 STSAAVTEKGKLYMWGN 169
+A VT G+L+ +G+
Sbjct: 425 WHTAVVTSAGQLFTFGD 441
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
PK L + V + + IA GG H+ +T G++F+WG G+LGH + P +++AL
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALG 358
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+ + ++CG + AVT G LY WG+
Sbjct: 359 NTNIELVSCGEYHTCAVTLSGDLYTWGD 386
>gi|325185526|emb|CCA20008.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
gi|325188743|emb|CCA23274.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 992
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 20/157 (12%)
Query: 40 PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG 99
P+ +S F T+ L +GQ + WG LG + +P L+ L V ++++A G
Sbjct: 204 PITKISASKFHTVALNADGQCFTWGFGKGGRLGLETQCDHLEPALVKKLAHVFLVKVAAG 263
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFT---QNQKVPMVIEALADEFVTHIACGGSTSA 156
H+LAL+ +G+++SWG GQLGHS +++ P I+AL V IA S SA
Sbjct: 264 ENHTLALSQNGQLYSWGSNSFGQLGHSSKCTLESRLFPKRIDALRGLIVREIAASRSHSA 323
Query: 157 AVTEKGK-----------------LYMWGNAKDSQLG 176
A+ E K L+ WGN K QLG
Sbjct: 324 AICESHKSANISDDNAQDNGNQRELFTWGNNKKGQLG 360
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 30/148 (20%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG +G GRLGL + L P+ VK L V + V+ G T+ L++ GQ
Sbjct: 223 QCFTWGFGKG-GRLGL-----ETQCDHLE-PALVKKLAHVFLVKVAAGENHTLALSQNGQ 275
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVD----VRIIQIANGGYHSLA---------L 106
L++WG+NS +LG + + +L P +D + + +IA HS A +
Sbjct: 276 LYSWGSNSFGQLGHSSKC-TLESRLFPKRIDALRGLIVREIAASRSHSAAICESHKSANI 334
Query: 107 TDDG--------KVFSWGYGGHGQLGHS 126
+DD ++F+WG GQLG S
Sbjct: 335 SDDNAQDNGNQRELFTWGNNKKGQLGRS 362
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 83/219 (37%), Gaps = 39/219 (17%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--------------PVPVAAVSC 46
EL+TWG ++ +G+LG + G SIP +V V V +S
Sbjct: 347 ELFTWGNNK-KGQLGRSEAFATHH--GDSIPKRVNLFLSHPVLSEMLEHSDSVYVNQISM 403
Query: 47 GGFFTMVL-------TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN------LVDVRI 93
T+VL +GQ+W G N + L R V K K P + V I
Sbjct: 404 AEDHTLVLLNCTRNQVSQGQVWRCG-NGYFHLVR---VNFEKAKETPRKSTFLAVPPVSI 459
Query: 94 IQIANGGYHSLALTDDGKVFSWGYG----GHGQLGHSFTQNQKVPMVIEALAD-EFVTHI 148
++I+ HS+AL G+V+ WG G + P ++ L V I
Sbjct: 460 VRISCARNHSMALDSRGQVYVWGSNKTACGQDVDAPAIPSYPGAPCRVKNLCSFGLVVDI 519
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
+ A VTE G L WG + LG QP P
Sbjct: 520 SASHDRCAIVTENGDLVTWGYGPEGSLGHGSKNTYQPHP 558
Score = 38.9 bits (89), Expect = 0.96, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 31/162 (19%)
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVD-----------------VRIIQIANGGY 101
+L+ WG N +LGR + +P V+ V + QI+
Sbjct: 347 ELFTWGNNKKGQLGRSEAFATHHGDSIPKRVNLFLSHPVLSEMLEHSDSVYVNQISMAED 406
Query: 102 HSLALTD-------DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVT--HIACGG 152
H+L L + G+V+ G G + +F + ++ P LA V+ I+C
Sbjct: 407 HTLVLLNCTRNQVSQGQVWRCGNGYFHLVRVNFEKAKETPRKSTFLAVPPVSIVRISCAR 466
Query: 153 STSAAVTEKGKLYMWGNAKDS---QLGVPGLPVV--QPCPVE 189
+ S A+ +G++Y+WG+ K + + P +P PC V+
Sbjct: 467 NHSMALDSRGQVYVWGSNKTACGQDVDAPAIPSYPGAPCRVK 508
>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
rerio]
Length = 708
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/179 (34%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LY G D EG++GLG E+ L+ P +V ++ V VSCG + + +T +G L+
Sbjct: 162 LYMRG-DNSEGQIGLG-----KESNALT-PQEV-SVGKRVFWVSCGYYHSAFVTVDGALY 213
Query: 62 NWGANSNYELG-RGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G + +LG +++ K P+ + ++ D R++Q+A GG H++ALT++ +V+S+G G
Sbjct: 214 TFGEKDSGKLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVALTEN-EVYSFGLGQ 271
Query: 120 HGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH +F ++P V+E V H ACG + +A +T+ G LY +G+ + +LG+
Sbjct: 272 FGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGL 330
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
+SCG T ++TE G+L+ +G+N+ +LG G + KP + L R+ A G H+
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKG 162
L T G +++ G GQLG ++ ++E + + +A G +TSAA+T+ G
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDG 160
Query: 163 KLYMWGNAKDSQLGV 177
+LYM G+ + Q+G+
Sbjct: 161 RLYMRGDNSEGQIGL 175
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 11/155 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LYT+G ++ G+LGL + N +P +V +P V V+CGG T+ LTE +++
Sbjct: 212 LYTFG-EKDSGKLGLSTEKLANH----KVPQQVTDIPDRVVQVACGGGHTVALTEN-EVY 265
Query: 62 NWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++G +LG G + + P+++ + R+ A G H+ +TD+G ++++G G H
Sbjct: 266 SFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRH 325
Query: 121 GQLG---HSFTQNQKVPMVIEALADEFVTHIACGG 152
G+LG +FT NQ P + D V + CGG
Sbjct: 326 GKLGLGEENFT-NQFKPTLCPRFLDYHVHSVTCGG 359
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
G+LGLG N+ P+ VKAL V +CG T+V T G L+ G N+ +
Sbjct: 66 GQLGLGTKTTVNK------PTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQ 119
Query: 71 LGRGDRVGGWKPKLLPNLVDV-----RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH 125
LG GD + +LV+ I +A G S ALT DG+++ G GQ+G
Sbjct: 120 LGLGD----CNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGL 175
Query: 126 SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
N P E + V ++CG SA VT G LY +G +LG+
Sbjct: 176 GKESNALTPQ--EVSVGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGL 225
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 44/84 (52%)
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
++I+ G H+ +T++GK+F +G GQLG P ++AL E V ACG +
Sbjct: 39 LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRT 98
Query: 154 TSAAVTEKGKLYMWGNAKDSQLGV 177
+ T +G LY G + QLG+
Sbjct: 99 HTLVFTSRGNLYACGGNNEGQLGL 122
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIAN 98
V +CG T ++T+ G L+ +G + +LG G+ +KP L P +D + +
Sbjct: 298 VKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTC 357
Query: 99 GGYHSLAL 106
GG H L L
Sbjct: 358 GGCHMLVL 365
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y+WG ++ G+LGLG + + I S + + AAVS + V++ G+L
Sbjct: 578 VYSWGYND-RGQLGLGSTISKSHTPRM-IDSLREKYHITTAAVSY--HHSAVVSSNGELL 633
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+G N +LG P+L+ +L I ++A G YH++A+T G+V+S+G +G
Sbjct: 634 MFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYG 693
Query: 122 QLGHSFTQNQKVPMVIEAL---ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG +N KVP +++ +DE + ++CG + ++EKGKL WG QLG+
Sbjct: 694 QLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGI 752
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 82/153 (53%), Gaps = 5/153 (3%)
Query: 30 IPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG-GWKPKLL 85
I + V+AL + + A + G + + +G +++WG N +LG G + P+++
Sbjct: 545 IATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMI 604
Query: 86 PNLVDVRIIQIANGGYH-SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF 144
+L + I A YH S ++ +G++ +G GQLG TQ+Q P ++++L+ +
Sbjct: 605 DSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQV 664
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+T +ACG + A+T G++Y +G QLG+
Sbjct: 665 ITEVACGLYHTIAITSGGEVYSFGKNDYGQLGL 697
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 15/167 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL----PVPVAAVSCGGFFTMVLTE 56
E+Y++G+++ G+LGLG R + +P+ VK + AVSCG + T+ ++E
Sbjct: 683 EVYSFGKND-YGQLGLGHARN------MKVPTLVKTSLGESDEKIVAVSCGYYHTVTISE 735
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+G+L WG N +LG G + + +P + +I + G YH+L L +G+V +G
Sbjct: 736 KGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMSNGRVMVFG 795
Query: 117 YGGHGQLGHSF----TQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + + +P+ +LA++ V IA G +S +T
Sbjct: 796 RNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYILT 842
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV---DVRIIQIA 97
+ V+CG + T+ +T G+++++G N +LG G P L+ + D +I+ ++
Sbjct: 665 ITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVS 724
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
G YH++ +++ GK+ +WG +GQLG ++ + + +CG +
Sbjct: 725 CGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLI 784
Query: 158 VTEKGKLYMWGNAKDSQLG 176
+ G++ ++G QLG
Sbjct: 785 LMSNGRVMVFGRNNKGQLG 803
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Query: 56 EEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
++ +L++ G N+ EL G K + +P I IA G + DG VF+
Sbjct: 467 DDCELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDIAGGNEVLAVVMKDGAVFTC 526
Query: 116 GYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKD 172
G GQ G+ +F + + + AL+ + +A G AV G +Y WG
Sbjct: 527 GLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDR 586
Query: 173 SQLGV 177
QLG+
Sbjct: 587 GQLGL 591
>gi|295789059|ref|NP_001171423.1| X-linked retinitis pigmentosa GTPase regulator isoform 4 [Mus
musculus]
gi|74223915|dbj|BAE23845.1| unnamed protein product [Mus musculus]
Length = 651
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG D EG++GL + + IP +V + P++ +SCG + + +T +G+L
Sbjct: 103 KLFMWG-DNSEGQIGL------EDKSNVCIPHEV-TVGKPISWISCGYYHSAFVTMDGEL 154
Query: 61 WNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G N +LG + + P+ + + + R+IQ+A GG H++ LT+ V+++G G
Sbjct: 155 YTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK-VVYAFGLG 212
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P +IE + D+ + HI+CG + +A +TE G LY +G+ + +LG+
Sbjct: 213 QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGL 272
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 57/170 (33%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
G+LGLG + P+ +KAL P V +CG T+V T+ G ++ G N+ +
Sbjct: 8 GQLGLG------SKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 61
Query: 71 LGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
LG GD + + D I Q++ G S ALT+DGK+F WG GQ+G
Sbjct: 62 LGLGDTDDRDTFHQIVFFTPADT-IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDK 120
Query: 129 QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
N +P E + ++ I+CG SA VT G+LY +G ++ +LG+P
Sbjct: 121 SNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLP 168
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G+N+ +LG G + KP + L ++ A G H+L TD G V++ G GQ
Sbjct: 2 FGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 61
Query: 123 LGHSFTQNQKV--PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
LG T ++ +V AD + ++ G +TSAA+TE GKL+MWG+ + Q+G+
Sbjct: 62 LGLGDTDDRDTFHQIVFFTPADT-IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL 117
>gi|408681156|ref|YP_006880983.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
gi|328885485|emb|CCA58724.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
Length = 408
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 97/176 (55%), Gaps = 13/176 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAG-GLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
++Y+WG D G+LG N G ++P +V+ +P V +S G F++ L E G+
Sbjct: 152 QVYSWG-DNSYGQLG------NNRTGDSRTVPDRVQGMP-KVKQISAGCDFSLALLENGK 203
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG + +LG G+R P+ + L + I++I G YH+LALT D V SWGY
Sbjct: 204 VYAWGRGIHGQLGTGNRATSSVPRQVQGLEN--IVEIDAGCYHALALTADDTVKSWGYNL 261
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+GQLG+S T++ +P+ ++ + E V+ I G + T ++ WGN + QL
Sbjct: 262 YGQLGNSSTKSSTLPVDVDWI--EGVSDIEAGAFHNYVKTSDSHVWGWGNNQYGQL 315
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 31 PSKVKAL------PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKL 84
PS V +L + S F + T++ + +WG NS+ +LG G P
Sbjct: 69 PSSVTSLFRGDVDQMSAGGTSSADSFALARTDK-TVKSWGHNSSGQLGNGGNTNQTVPTT 127
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT-QNQKVPMVIEALADE 143
+P L D++ +A GG H+LAL G+V+SWG +GQLG++ T ++ VP ++ +
Sbjct: 128 VPRLTDIK--DVAAGGKHALALDTSGQVYSWGDNSYGQLGNNRTGDSRTVPDRVQGMPK- 184
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V I+ G S A+ E GK+Y WG QLG
Sbjct: 185 -VKQISAGCDFSLALLENGKVYAWGRGIHGQLGT 217
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS-----LALTDDGKVFSWG 116
+WGA +LG G P + +L + Q++ GG S LA TD V SWG
Sbjct: 49 SWGAGRTGQLGNGTLSDSLSPSSVTSLFRGDVDQMSAGGTSSADSFALARTDK-TVKSWG 107
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ GQLG+ NQ VP + L D + +A GG + A+ G++Y WG+ QLG
Sbjct: 108 HNSSGQLGNGGNTNQTVPTTVPRLTD--IKDVAAGGKHALALDTSGQVYSWGDNSYGQLG 165
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 32 SKVKALPVPV------AAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD--------RV 77
+K LPV V + + G F V T + +W WG N +L D R
Sbjct: 270 TKSSTLPVDVDWIEGVSDIEAGAFHNYVKTSDSHVWGWGNNQYGQLLESDEAFDANVSRT 329
Query: 78 GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT--QNQKVPM 135
P +P L V+ +A G H +A+T D VF+WG+ G GQLG+ T + + V +
Sbjct: 330 NRTAPVEIPRLEGVQ--HLAAGARHGVAVTAD-DVFTWGHNGEGQLGNGTTVARYESVKI 386
Query: 136 VIEALADEFVTHIACGGSTSAA 157
+ E A + V ++ GG+T+ A
Sbjct: 387 LNEGSAIKNVA-VSLGGNTTYA 407
>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
Length = 606
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAA-VSCGGFFTMVLTEEGQ 59
+L+TWG + GRLGL G+ + P++V L V V+CG + + ++ + +
Sbjct: 233 KLFTWGLCD-HGRLGLKSGKD------VPYPTRVDFLKDEVIVDVTCGMYSSACISHDMK 285
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG+ S +LG ++ W P+ + L + I+Q+A G H AL+ DG V++WG G
Sbjct: 286 VFTWGSGSKGQLGHVEKSDEWLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGE 345
Query: 120 HGQLGH----SFTQNQKVPMVIEALADEFV-----THIACGGSTSAAVTEKGKLYMWGNA 170
HGQLGH S + +K+ + +E E +ACG S + +T+ G+L +G +
Sbjct: 346 HGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGMS 405
Query: 171 KDSQLGV 177
+ LG+
Sbjct: 406 EFGALGL 412
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR--IIQIANGGYHSLALTDDGKVFSWGY 117
L+ WG + NY+LG G PKL+ L + II ++ G H A+ GK+F+WG
Sbjct: 180 LFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGL 239
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
HG+LG ++ P ++ L DE + + CG +SA ++ K++ WG+ QLG
Sbjct: 240 CDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLG 298
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 29/189 (15%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSK-----------VKALPVPVAAVSCGG 48
++YTWG EGE G+LG G + S P K V + PV ++CG
Sbjct: 337 DVYTWG--EGEHGQLGHG------DLNSCSTPKKLLLELENTTGEVADVGSPVL-LACGA 387
Query: 49 FFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV--DVRIIQIANGGYHSLAL 106
T++LT+ G+L ++G + LG G++ +P L+ + + R + ++ G H A+
Sbjct: 388 SVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAV 447
Query: 107 TDDGKVFSWGYGGHGQLG------HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
T G V++WG G G +G +S + + P +E D+ +CGG+ + +++
Sbjct: 448 TSKGNVYTWGQGCFGAVGKPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVILSK 507
Query: 161 KGKLYMWGN 169
G + + G+
Sbjct: 508 DGCVLVLGD 516
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 30 IPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP-- 86
+P V AL +P+ V+ G L+ +G ++ WG + +LG GD PK L
Sbjct: 307 LPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLE 366
Query: 87 ------NLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA 139
+ DV + +A G +L LTD G++ S+G G LG + P +I +
Sbjct: 367 LENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITS 426
Query: 140 --LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ H++ G AAVT KG +Y WG +G P
Sbjct: 427 RIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQGCFGAVGKPA 468
>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1563
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 88/177 (49%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG-PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+YTWGR+ G G LG G G P I K K V V CGG T+ TE G
Sbjct: 895 HVYTWGRN-GSGELGHGDKSGVPQLHPKQVIFFKSKC----VKEVVCGGEHTLARTESGS 949
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG +LG GDR W P + L + + Q+A G H++ + G+V +G G
Sbjct: 950 VYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGE 1009
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG ++ VP ++A+ + ACG +A +TE G++Y G+A QLG
Sbjct: 1010 VGQLGTGMRKDLLVPTKLQAMPS--IVQAACGYCHTALLTEAGEVYTCGSAMSGQLG 1064
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 83/152 (54%), Gaps = 10/152 (6%)
Query: 28 LSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK--PKLL 85
L +P+K++A+P V A +CG T +LTE G+++ G+ + +LG D + + PK++
Sbjct: 1021 LLVPTKLQAMPSIVQA-ACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMV 1079
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWG-------YGGHGQLGHSFTQNQKVPMVIE 138
L RI IA G +H++A+TD V++WG G Q + + P +++
Sbjct: 1080 EGLNGKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVK 1139
Query: 139 ALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
L + ++ ++CG + S A T G++Y+W +
Sbjct: 1140 GLMGKRISLVSCGHAHSVATTMDGEVYVWSST 1171
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV----DVRIIQI 96
V VSCG LTE G ++ WG N + ELG GD+ G P+L P V + ++
Sbjct: 877 VVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSG--VPQLHPKQVIFFKSKCVKEV 934
Query: 97 ANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSA 156
GG H+LA T+ G V+ WG G GQLG +P+ I+ L VT +A G + +
Sbjct: 935 VCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTI 994
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
V + G++ ++G + QLG
Sbjct: 995 VVLKSGEVMVFGGGEVGQLGT 1015
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 88 LVDVR-IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN--QKVPMVIEALADEF 144
LV +R ++ ++ G H ALT++G V++WG G G+LGH Q P + +
Sbjct: 871 LVSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKC 930
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V + CGG + A TE G +Y WGN + QLG+
Sbjct: 931 VKEVVCGGEHTLARTESGSVYGWGNGRIGQLGL 963
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 22/159 (13%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWG----ANSNYELGRGDRVGGWK---PKLLPNLVDVRI 93
+ ++CG F T+ +T+ ++ WG +S+ + + + K P ++ L+ RI
Sbjct: 1087 IRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRI 1146
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGG--------HGQLGHSFTQNQKVPMVIEALAD--- 142
++ G HS+A T DG+V+ W G G + + + P+++ A+ D
Sbjct: 1147 SLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQD 1206
Query: 143 ----EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V H A G + VTE G LY WG+ QLG+
Sbjct: 1207 AKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLGL 1245
>gi|74217026|dbj|BAE26617.1| unnamed protein product [Mus musculus]
Length = 857
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
V+ GG + VLT G ++ WG N +LG D + P LL +L +I+ I G H+
Sbjct: 3 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 62
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKG 162
ALT +G VF++G GG+GQLGH+ T ++ P + L VT +ACG TSA V G
Sbjct: 63 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSG 122
Query: 163 KLYMWGNAKDSQLG 176
++Y +G + QLG
Sbjct: 123 RIYSFGLGGNGQLG 136
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 19 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 71
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + Q+A G H+ A G+++S+G GG
Sbjct: 72 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 131
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 132 NGQLGTGSTSNRKSPFTVK 150
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS 153
+Q+A GG HS LT G +F WG GQLG + ++ VP ++++L + + +I CG
Sbjct: 1 MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGED 60
Query: 154 TSAAVTEKGKLYMWGNAKDSQLG 176
+AA+T++G ++ +G QLG
Sbjct: 61 HTAALTKEGGVFTFGAGGYGQLG 83
>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 1166
Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPS-KVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+Y WG D G+LGL + G S PS + + V + ++CG T + + G +
Sbjct: 36 VYVWGSDT-YGQLGLA-----SREFGKSCPSPRFTSFSVVIEDIACGEEHTSFIAQNGYV 89
Query: 61 WNWGANSNYELGRGDRVGGWK--PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG +K P L+ L + +QI+ G YH+ + D+G++F+WG
Sbjct: 90 YSMGNNNQGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNGQLFTWGQN 149
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG + N P +++ L + ++CG + +T+ K++ +G+ K QLG+
Sbjct: 150 CEGQLGIGKSDNMTTPQIVD-LKNNLAVFVSCGKRNTMVITQTQKIFGFGDGKCGQLGL 207
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 10/180 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+TWG++ EG+LG+G ++ ++ P V VSCG TMV+T+ ++
Sbjct: 142 QLFTWGQN-CEGQLGIG------KSDNMTTPQIVDLKNNLAVFVSCGKRNTMVITQTQKI 194
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ +G +LG G+ +KP+ L + I+ I+ G H+L L ++G+ FS G +
Sbjct: 195 FGFGDGKCGQLGLGNECNEYKPRQL-QIQMQNIVAISCGDRHTLFLNEEGEAFSCGNNTY 253
Query: 121 GQLG-HSFTQNQKVPMVIEALAD-EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
QLG + +Q+ +P+ ++ + +FV IA SAA++ +G LY+WG Q P
Sbjct: 254 NQLGCANNSQSSNIPVKVKQKSTLKFVKVIAANTPMSAALSSEGYLYLWGTGFFGQFDRP 313
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 15/143 (10%)
Query: 23 NEAGGLSIPSKVKALPVP--VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW 80
N + +IP KVK V ++ + L+ EG L+ WG + R R +
Sbjct: 260 NNSQSSNIPVKVKQKSTLKFVKVIAANTPMSAALSSEGYLYLWGTGFFGQFDRPTRCE-F 318
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTD-DGKVFSWGYGGHGQLGHSFTQNQKV--PMVI 137
PK +L+D+ I G + L D +GKV+SWG G+LG Q+ P+ +
Sbjct: 319 APK---DLLDICI------GNQFICLLDGEGKVYSWGSNMFGELGQGIANGQQALEPIQV 369
Query: 138 EALADEFVTHIACGGSTSAAVTE 160
+ + D+ V + CG + A+ E
Sbjct: 370 DKIKDKNVKRLYCGANFVFAMGE 392
Score = 36.2 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 106 LTDDGKVFSWGYGGHGQLGHSFTQ-NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
L D V+ WG +GQLG + + + P + IACG ++ + + G +
Sbjct: 30 LKDFTPVYVWGSDTYGQLGLASREFGKSCPSPRFTSFSVVIEDIACGEEHTSFIAQNGYV 89
Query: 165 YMWGNAKDSQLGV 177
Y GN QLGV
Sbjct: 90 YSMGNNNQGQLGV 102
>gi|427797227|gb|JAA64065.1| Putative alpha-tubulin suppressor, partial [Rhipicephalus
pulchellus]
Length = 606
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 10 GEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCG-GFFTMVLTEEGQLWNWGANS 67
G LGLG G E P KV AL + A++ G G + +TE G+L +WG N
Sbjct: 126 SSGCLGLGDTHGSLE------PRKVDALCRKGIHALAYGSGPHVLAVTESGELLSWGHNG 179
Query: 68 NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF 127
+LG G P + + R+ Q+A G +HSLALT +G V++WG GQ+G
Sbjct: 180 YCQLGNNCNTQGLVPSSISAGLSHRVAQVACGSHHSLALTTNGDVYAWGQNNCGQVGSGS 239
Query: 128 TQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV-PGLPVVQP 185
T NQ P + + + +ACG ++S AV E G+++ WG + QLG+ + P
Sbjct: 240 TTNQPTPRKVSSGIGGRRCIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSP 299
Query: 186 CPV 188
C V
Sbjct: 300 CRV 302
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
V+CG +M + E G+++ WG N N +LG G+ V P + NL V I ++ G H+
Sbjct: 261 VACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHT 320
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQ----KVPMVIEALADEFVTHIACGGSTSAAVT 159
+AL+D+G +++WG +GQLG NQ K+P I + + +H SA +T
Sbjct: 321 MALSDEGVLYTWGANSYGQLGTGNKANQVSPFKMPTDIGRIVEIAASHY---NHISAVMT 377
Query: 160 EKGKLYMWGNAKDSQLGVP 178
+ ++YMWG + + VP
Sbjct: 378 QTSRVYMWGQCRGQSVTVP 396
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 2/137 (1%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+++T++ ++ G+NS+ LG GD G +P+ + L I +A G G H LA+T+ G
Sbjct: 111 LMVTQDDDVFALGSNSSGCLGLGDTHGSLEPRKVDALCRKGIHALAYGSGPHVLAVTESG 170
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
++ SWG+ G+ QLG++ VP I A V +ACG S A+T G +Y WG
Sbjct: 171 ELLSWGHNGYCQLGNNCNTQGLVPSSISAGLSHRVAQVACGSHHSLALTTNGDVYAWGQN 230
Query: 171 KDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 231 NCGQVG-SGSTTNQPTP 246
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSA 156
+ G +L +T D VF+ G G LG T P ++AL + + +A G G
Sbjct: 105 SSGNEALMVTQDDDVFALGSNSSGCLGLGDTHGSLEPRKVDALCRKGIHALAYGSGPHVL 164
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
AVTE G+L WG+ QLG
Sbjct: 165 AVTESGELLSWGHNGYCQLG 184
>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
Length = 590
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG D EG++GL + + IP +V + P++ +SCG + + +T +G+L
Sbjct: 198 KLFMWG-DNSEGQIGL------EDKSNVCIPHEV-TVGKPISWISCGYYHSAFVTMDGEL 249
Query: 61 WNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G N +LG + + P+ + + + R+IQ+A GG H++ LT+ V+++G G
Sbjct: 250 YTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK-VVYAFGLG 307
Query: 119 GHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P +IE + D+ + HI+CG + +A +TE G LY +G+ + +LG+
Sbjct: 308 QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGL 367
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 29 SIPSKV---KALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+IPSK +P+ +SCG T ++T +L+ +G+N+ +LG G + KP +
Sbjct: 63 NIPSKFWFKNDIPI---CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCI 119
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADE 143
L ++ A G H+L TD G V++ G GQLG T ++ +V AD
Sbjct: 120 KALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT 179
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++ G +TSAA+TE GKL+MWG+ + Q+G+
Sbjct: 180 -IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL 212
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG + P+ +KAL P V +CG T+V T+ G
Sbjct: 93 KLYMFGSNNW-GQLGLG------SKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGG 145
Query: 60 LWNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ G N+ +LG GD + + D I Q++ G S ALT+DGK+F WG
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT-IKQLSAGANTSAALTEDGKLFMWGD 204
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G N +P E + ++ I+CG SA VT G+LY +G ++ +LG+
Sbjct: 205 NSEGQIGLEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 262
Query: 178 P 178
P
Sbjct: 263 P 263
>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
Length = 1103
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+L+TWG D +GRLG G + +P+ V AL P V+CG T+ LT G
Sbjct: 499 KLFTWG-DGDKGRLGHG------DKEARLVPTCVAALVEPNFCQVACGHSLTVALTNSGH 551
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+ +LG G ++ L + ++A G YH LT +V++WG G
Sbjct: 552 IYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGA 611
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+G+LGH T ++ P ++EAL D+ V IACG + +AA+ L+ W + D +
Sbjct: 612 NGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSM 663
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 31/209 (14%)
Query: 1 ELYTWGR-DEGEGRLGLG-------PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTM 52
+LYTWG G LG G P R GL I S +SCG + T
Sbjct: 380 DLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISS-----------ISCGPWHTA 428
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---- 108
++T G+L+ +G + LG GDR P+ + +L +R ++ A G +H+ A+ +
Sbjct: 429 LVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVIIG 488
Query: 109 --------DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
GK+F+WG G G+LGH + + VP + AL + +ACG S + A+T
Sbjct: 489 NPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVALTN 548
Query: 161 KGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
G +Y G+ QLG P P VE
Sbjct: 549 SGHIYTMGSPVYGQLGNPQADGKLPARVE 577
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 22/190 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + +SIP +V++L + +CG + T + E
Sbjct: 435 KLFTFG-DGTFGVLGHG------DRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVII 487
Query: 57 ---------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+L+ WG LG GD+ P + LV+ Q+A G ++ALT
Sbjct: 488 GNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVALT 547
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYM 166
+ G +++ G +GQLG+ + K+P +E L+ FV +ACG A +T + ++Y
Sbjct: 548 NSGHIYTMGSPVYGQLGNP-QADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYT 606
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 607 WGKGANGRLG 616
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 30 IPSKVKALPV-PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P ++++ V V ++CG ++T++G++++WG LG G PKL+ L
Sbjct: 298 LPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDAL 357
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIEA-LADEFV 145
++ I +A G YH+ A+T G +++WG G + G LGH + VP + L +
Sbjct: 358 SNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHI 417
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ I+CG +A VT GKL+ +G D GV G
Sbjct: 418 SSISCGPWHTALVTSAGKLFTFG---DGTFGVLG 448
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%)
Query: 76 RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
++ PK L ++V + + IA G H+ +T G+VFSWG G+LGH + P
Sbjct: 293 KIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+I+AL++ + +ACG + AVT G LY WG+
Sbjct: 353 LIDALSNLNIELVACGEYHTCAVTLSGDLYTWGD 386
>gi|428185814|gb|EKX54666.1| hypothetical protein GUITHDRAFT_40316, partial [Guillardia theta
CCMP2712]
Length = 272
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+++TWG+++ G+LG GP + G L +K V VAA G F+M LT+ G++
Sbjct: 52 KVFTWGQNK-HGQLGHGP---SDYLGSLGPTAKTDGKCVQVAA---GYNFSMALTDRGEI 104
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLV--DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G + L +GD + P+++ +L + +I G H + G+ +WG G
Sbjct: 105 FVFGEGRHGVLAQGDELSKSSPQVIDSLSVPGYVVDKIFCGERHCACIVRYGQALTWGCG 164
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLGHS ++ P +E LA+ V I+CG + +T LY GN KD +LG
Sbjct: 165 SDGQLGHSSRDDEHFPRKVEHLANVSVRTISCGSKHTCFLTSDNSLYTCGNGKDGKLG 222
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 8/170 (4%)
Query: 10 GEGRLGLGPGRGPNEAGGLSIPSKVKALPVP---VAAVSCGGFFTMVLTEEGQLWNWGAN 66
GEGR G+ + S P + +L VP V + CG + GQ WG
Sbjct: 108 GEGRHGV---LAQGDELSKSSPQVIDSLSVPGYVVDKIFCGERHCACIVRYGQALTWGCG 164
Query: 67 SNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS 126
S+ +LG R P+ + +L +V + I+ G H+ LT D +++ G G G+LGH
Sbjct: 165 SDGQLGHSSRDDEHFPRKVEHLANVSVRTISCGSKHTCFLTSDNSLYTCGNGKDGKLGHG 224
Query: 127 FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
++ P +E L + V ++CG +A + K +Y +G+ QLG
Sbjct: 225 DERSYLYPKKVETL--QAVKEVSCGDYHTACIDGKSIIYTFGSGTRGQLG 272
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 14/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L WG D G+LG+ + S+ + + V ++CG +++L++ G++
Sbjct: 1 KLVAWG-DNDFGQLGV-----SEQMMNHSLTDVQQTFDLRVEDMACGSAHSVILSD-GKV 53
Query: 61 WNWGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG N + +LG G D +G P D + +Q+A G S+ALTD G++F +G G
Sbjct: 54 FTWGQNKHGQLGHGPSDYLGSLGP---TAKTDGKCVQVAAGYNFSMALTDRGEIFVFGEG 110
Query: 119 GHGQLGHSFTQNQKVPMVIEALA--DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
HG L ++ P VI++L+ V I CG A + G+ WG D QLG
Sbjct: 111 RHGVLAQGDELSKSSPQVIDSLSVPGYVVDKIFCGERHCACIVRYGQALTWGCGSDGQLG 170
>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 1035
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 105/180 (58%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG D EG++GL + IP +V + P++ +SCG + + +T +G+L
Sbjct: 198 KLFMWG-DNSEGQIGL------KNKSNVCIPHEV-TVGKPISWISCGYYHSAFVTTDGEL 249
Query: 61 WNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G N +LG ++ + P+ + + D ++IQ+A GG H++ LT+ V+++G G
Sbjct: 250 YTFGEPENGKLGLPNQLLINHRSPQRVLGIPD-KVIQVACGGGHTVVLTEK-VVYAFGLG 307
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P +I+ + D+ ++HI+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 308 QFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGDGRHGKLGL 367
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ +KAL P V +CG T+V T+ G
Sbjct: 93 KLYMFGSNNW-GQLGLG------SKSAISKPTCIKALKPEKVKLAACGRNHTLVSTDTGG 145
Query: 60 LWNWGANSNYELGRGD--------RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK 111
++ G N+ +LG GD ++G + P D+ I Q++ G S ALT+DGK
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPS------DI-IKQLSAGANTSAALTEDGK 198
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
+F WG GQ+G N +P E + ++ I+CG SA VT G+LY +G +
Sbjct: 199 LFMWGDNSEGQIGLKNKSNVCIPH--EVTVGKPISWISCGYYHSAFVTTDGELYTFGEPE 256
Query: 172 DSQLGVP 178
+ +LG+P
Sbjct: 257 NGKLGLP 263
Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VP+ +SCG T ++T +L+ +G+N+ +LG G + KP + L ++ A
Sbjct: 74 VPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAAC 132
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA-DEFVTHIACGGSTSAA 157
G H+L TD G V++ G GQLG T ++ I + + ++ G +TSAA
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAA 192
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
+TE GKL+MWG+ + Q+G+
Sbjct: 193 LTEDGKLFMWGDNSEGQIGL 212
>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101226798 [Cucumis sativus]
Length = 1103
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
+L+TWG D +GRLG G + +P+ V AL P V+CG T+ LT G
Sbjct: 499 KLFTWG-DGDKGRLGHG------DKEARLVPTCVAALVEPNFCQVACGHSLTVALTNSGH 551
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ G+ +LG G ++ L + ++A G YH LT +V++WG G
Sbjct: 552 IYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGA 611
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
+G+LGH T ++ P ++EAL D+ V IACG + +AA+ L+ W + D +
Sbjct: 612 NGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSM 663
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 31/209 (14%)
Query: 1 ELYTWGR-DEGEGRLGLG-------PGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTM 52
+LYTWG G LG G P R GL I S +SCG + T
Sbjct: 380 DLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISS-----------ISCGPWHTA 428
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD---- 108
++T G+L+ +G + LG GDR P+ + +L +R ++ A G +H+ A+ +
Sbjct: 429 LVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVIIG 488
Query: 109 --------DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
GK+F+WG G G+LGH + + VP + AL + +ACG S + A+T
Sbjct: 489 NPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVALTN 548
Query: 161 KGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
G +Y G+ QLG P P VE
Sbjct: 549 SGHIYTMGSPVYGQLGNPQADGKLPARVE 577
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 22/190 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+L+T+G D G LG G + +SIP +V++L + +CG + T + E
Sbjct: 435 KLFTFG-DGTFGVLGHG------DRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVII 487
Query: 57 ---------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT 107
G+L+ WG LG GD+ P + LV+ Q+A G ++ALT
Sbjct: 488 GNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVALT 547
Query: 108 DDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYM 166
+ G +++ G +GQLG+ + K+P +E L+ FV +ACG A +T + ++Y
Sbjct: 548 NSGHIYTMGSPVYGQLGNP-QADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYT 606
Query: 167 WGNAKDSQLG 176
WG + +LG
Sbjct: 607 WGKGANGRLG 616
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 30 IPSKVKALPV-PVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+P ++++ V V ++CG ++T++G++++WG LG G PKL+ L
Sbjct: 298 LPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDAL 357
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGH--GQLGHSFTQNQKVPMVIEA-LADEFV 145
++ I +A G YH+ A+T G +++WG G + G LGH + VP + L +
Sbjct: 358 SNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHI 417
Query: 146 THIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ I+CG +A VT GKL+ +G D GV G
Sbjct: 418 SSISCGPWHTALVTSAGKLFTFG---DGTFGVLG 448
>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
Length = 681
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG D EG++GL + + IP +V + P++ +SCG + + +T +G+L
Sbjct: 198 KLFMWG-DNSEGQIGL------EDKSNVCIPHEV-TVGKPISWISCGYYHSAFVTMDGEL 249
Query: 61 WNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G N +LG + + P+ + + + R+IQ+A GG H++ LT+ V+++G G
Sbjct: 250 YTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK-VVYAFGLG 307
Query: 119 GHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P +IE + D+ + HI+CG + +A +TE G LY +G+ + +LG+
Sbjct: 308 QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGL 367
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 29 SIPSKV---KALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+IPSK +P+ +SCG T ++T +L+ +G+N+ +LG G + KP +
Sbjct: 63 NIPSKFWFKNDIPI---CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCI 119
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADE 143
L ++ A G H+L TD G V++ G GQLG T ++ +V AD
Sbjct: 120 KALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT 179
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++ G +TSAA+TE GKL+MWG+ + Q+G+
Sbjct: 180 -IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL 212
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG + P+ +KAL P V +CG T+V T+ G
Sbjct: 93 KLYMFGSNNW-GQLGLG------SKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGG 145
Query: 60 LWNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ G N+ +LG GD + + D I Q++ G S ALT+DGK+F WG
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT-IKQLSAGANTSAALTEDGKLFMWGD 204
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G N +P E + ++ I+CG SA VT G+LY +G ++ +LG+
Sbjct: 205 NSEGQIGLEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 262
Query: 178 P 178
P
Sbjct: 263 P 263
>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
niloticus]
Length = 1536
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 104/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG D EG++GLG + +S P +V ++ P++ VSCG + + ++T +G L
Sbjct: 161 KLFMWG-DNTEGQIGLG------KESQVSSPQEV-SVGQPISWVSCGYYHSALVTVDGAL 212
Query: 61 WNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G + +LG G G P+L+ ++ + + Q+A GG H++AL + G V+++G G
Sbjct: 213 YTFGERDSGKLGLGTHQLPGHRVPQLVKSIKEP-VRQVACGGGHTVALAE-GNVYTFGLG 270
Query: 119 GHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLGH +F +VP ++E + CG + +A +TE G LY +G+ + +LG+
Sbjct: 271 QFGQLGHGTFIFESRVPRLVEHFKKGRACQVVCGENHTAVITEDGLLYTFGDGRHGKLGL 330
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 29 SIPSKV---KALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+IPSK +P+ +A CG T ++TE G+L+ +G+N+ +LG G +V KP +
Sbjct: 26 NIPSKFWLKNDIPLRIA---CGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCV 82
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE-F 144
L ++ +A G H+L T GKV++ G GQLG + + ++ +
Sbjct: 83 KALKSEKVQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGP 142
Query: 145 VTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ +A G +TSAA+T GKL+MWG+ + Q+G+
Sbjct: 143 IKMLAAGSNTSAALTVSGKLFMWGDNTEGQIGL 175
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
LYT+G + G+LGLG + P G +P VK++ PV V+CGG T+ L E G ++
Sbjct: 212 LYTFG-ERDSGKLGLGTHQLP----GHRVPQLVKSIKEPVRQVACGGGHTVALAE-GNVY 265
Query: 62 NWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+G +LG G + + P+L+ + R Q+ G H+ +T+DG ++++G G H
Sbjct: 266 TFGLGQFGQLGHGTFIFESRVPRLVEHFKKGRACQVVCGENHTAVITEDGLLYTFGDGRH 325
Query: 121 GQLG---HSFTQNQKVPMVIEALADEFVTHIACGG 152
G+LG +FT NQ P + V CGG
Sbjct: 326 GKLGLGEENFT-NQFKPTLCLRFLKYNVQGAMCGG 359
>gi|168037867|ref|XP_001771424.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677342|gb|EDQ63814.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 465
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 13/189 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPG----RGPNEAGGLSIPSKVKA---LPVP---VAAVSCGGFF 50
++ WG G+G+LGLG P + L++ K A +P+P + A++CGG
Sbjct: 222 HVWAWGYG-GDGQLGLGSRMRIVSSPQQIPCLNLTEKAVARSGVPIPGKCIKAIACGGRH 280
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+ V+T+ G L +G + ++G+G P + + +RI+ IA G +H+L +TD G
Sbjct: 281 SAVVTDAGALLTFGWGLHGQVGQGSTEDELSPCCVSTIGGLRIVGIAAGLWHTLCITDVG 340
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEA--LADEFVTHIACGGSTSAAVTEKGKLYMWG 168
V+++G GQLG + P +I+A L DE +ACG SA +T GK++ WG
Sbjct: 341 DVYAFGGNQFGQLGVGGNAAELSPRMIDAPLLEDESCVEVACGARHSAVLTGSGKIFAWG 400
Query: 169 NAKDSQLGV 177
K QLG+
Sbjct: 401 WNKYGQLGL 409
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 15/156 (9%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVG-GWKPKLLP--NLVDVRIIQ 95
+ +A+V+ GG T+ L++ G +W WG + +LG G R+ P+ +P NL + + +
Sbjct: 202 IRIASVAAGGRHTLALSDVGHVWAWGYGGDGQLGLGSRMRIVSSPQQIPCLNLTEKAVAR 261
Query: 96 ------------IANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
IA GG HS +TD G + ++G+G HGQ+G T+++ P + +
Sbjct: 262 SGVPIPGKCIKAIACGGRHSAVVTDAGALLTFGWGLHGQVGQGSTEDELSPCCVSTIGGL 321
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ IA G + +T+ G +Y +G + QLGV G
Sbjct: 322 RIVGIAAGLWHTLCITDVGDVYAFGGNQFGQLGVGG 357
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL--PNLVDVRIIQIAN 98
+ ++ G + T+ +T+ G ++ +G N +LG G P+++ P L D +++A
Sbjct: 323 IVGIAAGLWHTLCITDVGDVYAFGGNQFGQLGVGGNAAELSPRMIDAPLLEDESCVEVAC 382
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
G HS LT GK+F+WG+ +GQLG N+ +P+ + IACG
Sbjct: 383 GARHSAVLTGSGKIFAWGWNKYGQLGLGDCNNRDLPVQVTMNDGGRAASIACG 435
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 34 VKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYELGRGDRVGGWK-----PKLLPN 87
+ AL P+ V GG F + ++E G+L WG S ELG+ + G + P LLP
Sbjct: 23 ITALDDPLKIVCNGGCGFGIGISESGKLNTWG--STTELGQCYLISGKQQEVPEPYLLPT 80
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
D IIQ A G H A+T +G+V++WG+
Sbjct: 81 --DSPIIQAAGGWAHCAAVTGNGEVYTWGW 108
>gi|302823907|ref|XP_002993601.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
gi|300138529|gb|EFJ05293.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
Length = 441
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 92/189 (48%), Gaps = 26/189 (13%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++ WG+++G P G+ S V V V+CGG L+E G L
Sbjct: 124 RMWIWGQNQGS--------NSPRLFSGVFSSSTV------VIQVACGGAHAAALSEHGVL 169
Query: 61 WNWGANSNYELGRGDRVGGWK-PKLLPNLVD--------VRIIQIANGGYHSLALTDDGK 111
WG N + +LGRG G + K++ + V V++ Q+ G YH+ A+ +G
Sbjct: 170 QTWGYNEHGQLGRGISCEGLQGAKIVTSFVKFLNEPVETVKVKQVVCGEYHTAAIAHNGD 229
Query: 112 VFSWGYGGHGQLGHSFTQ--NQKV-PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
V++WG G GQLGH Q N++V P + L V I+ GG S A++ G LYMWG
Sbjct: 230 VYTWGLGSSGQLGHRSLQSGNKEVFPRRVVTLEGVDVVQISAGGVHSCAISSAGGLYMWG 289
Query: 169 NAKDSQLGV 177
+ QLG+
Sbjct: 290 GSHAGQLGL 298
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 89/243 (36%), Gaps = 72/243 (29%)
Query: 2 LYTWGRDE-GEGRLGLGPGRGPNEAGGLSIPSKVKALPVP----VAAVSCGGFFTMVLTE 56
LY WG ++ G+ G A ++P ++ P + A+SCG T +
Sbjct: 12 LYAWGYNQCGQA--------GQESAIHSAVPHPIRVAIHPSSLRLIAISCGLEHTAAIAS 63
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD-------------------------- 90
+G L+ WG+N +LG G +PK + L D
Sbjct: 64 DGSLFTWGSNQFGQLGDGSETNSDRPKRVYGLRDEAVKSVACGANCTAAIADSRDGTCRG 123
Query: 91 ------------------------VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHS 126
+IQ+A GG H+ AL++ G + +WGY HGQLG
Sbjct: 124 RMWIWGQNQGSNSPRLFSGVFSSSTVVIQVACGGAHAAALSEHGVLQTWGYNEHGQLGRG 183
Query: 127 FT----QNQKVPMVIEALADE-----FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ Q K+ +E V + CG +AA+ G +Y WG QLG
Sbjct: 184 ISCEGLQGAKIVTSFVKFLNEPVETVKVKQVVCGEYHTAAIAHNGDVYTWGLGSSGQLGH 243
Query: 178 PGL 180
L
Sbjct: 244 RSL 246
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 15/174 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++YTWG G+LG R P +V L V V +S GG + ++ G
Sbjct: 229 DVYTWGLGS-SGQLG---HRSLQSGNKEVFPRRVVTLEGVDVVQISAGGVHSCAISSAGG 284
Query: 60 LWNWGANSNYELG---RGDRVGGWKP-----KLLPNLVDVRIIQIAN-GGYHSLALTDDG 110
L+ WG + +LG R DR+ G + +P LV + A G H+L +G
Sbjct: 285 LYMWGGSHAGQLGLGPRQDRICGTSDIDFFFQRIPVLVIPSGARSATCGDLHTLVRMANG 344
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL 164
++ GY +GQ P I+ E +T +A GG SA +T+ L
Sbjct: 345 RLLGCGYNSYGQADSGKAYYAWYPSPIDWCVGE-ITCLAAGGGHSAVLTQASNL 397
>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1056
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 69/222 (31%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTE--- 56
+LYT+G D G LG G N A S P +V++L + +VSCG + T + E
Sbjct: 390 QLYTFG-DGTFGVLGHG-----NRAS-CSYPKEVESLKGLRTISVSCGVWHTAAVVEVII 442
Query: 57 ------EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR------------------ 92
G+L+ WG Y LG GDR KP +P+L+D
Sbjct: 443 SQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAACGHTLTIGLTTSG 502
Query: 93 ----------------------------------IIQIANGGYHSLALTDDGKVFSWGYG 118
++++A G YH LT+ G+V++WG G
Sbjct: 503 HIFTVGSPVYGQLGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKG 562
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
+G+LGH ++KVP ++EAL D V +ACG S +AA+ +
Sbjct: 563 TNGRLGHGDIADRKVPTLVEALKDRSVKRVACGSSFTAAICQ 604
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV---PVAAVSCGGFFTMVLTEE 57
+LYTWG +G GL G G N + IP +V P+ PV+AVSCG + T ++T
Sbjct: 335 DLYTWG--DGTHNAGL-LGHGSNVSHW--IPKRVSG-PLDGLPVSAVSCGTWHTALITSS 388
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD--------- 108
GQL+ +G + LG G+R PK + +L +R I ++ G +H+ A+ +
Sbjct: 389 GQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNAS 448
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
GK+F+WG G +LGH ++ P + +L D ACG + + +T G ++ G
Sbjct: 449 SGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVG 508
Query: 169 NAKDSQLGVPG 179
+ QLG P
Sbjct: 509 SPVYGQLGNPN 519
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 1 ELYTWGR-------DEGEGRLGLGPGRGPNEAGGLSIPSKVKA-LPVPVAAVSCGGFFTM 52
++Y WG G R PG + + +P +++ + + V+ V+CG
Sbjct: 221 DIYVWGEVICDTISRSGSDRSAYSPGTTTD----VLVPKPLESNVMLDVSYVACGVKHAA 276
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
++T + +++ WG + LG G ++P+L+ +L + IA G +H+ A+T G +
Sbjct: 277 LVTRQAEVFTWGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGEFHTCAVTATGDL 336
Query: 113 FSWGYGGH--GQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAAVTEKGKLYMWGN 169
++WG G H G LGH + +P + D V+ ++CG +A +T G+LY +G+
Sbjct: 337 YTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSAVSCGTWHTALITSSGQLYTFGD 396
>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
SB210]
Length = 1984
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 63/185 (34%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 2 LYTWGRDEGEGRLG--LGPGRGPNEAGGLSIPSKVK--ALPVP-----VAAVSCGGFFTM 52
+++WG++ EG++G P + LS KV L VP V +V+CG ++
Sbjct: 1502 MFSWGQNT-EGQMGNVYDPKQNL-----LSKKIKVNFPKLIVPLKDTIVTSVACGYQHSV 1555
Query: 53 VLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKV 112
+T G + WG NS+ +LG G++ P P I ++ G H+LAL G+V
Sbjct: 1556 AITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSEHTLALDYIGQV 1615
Query: 113 FSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKD 172
FSWG G G LGH P +IEAL V I CGG S +T+ ++Y WG +
Sbjct: 1616 FSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGRNEG 1675
Query: 173 SQLGV 177
QLG+
Sbjct: 1676 GQLGI 1680
Score = 72.4 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 15/132 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG EG G LG G NE S P ++AL + V + CGG ++VLT+ Q
Sbjct: 1614 QVFSWGNGEG-GLLGHG-----NEDVCPS-PKIIEALKGLNVDFIVCGGLHSLVLTKNRQ 1666
Query: 60 LWNWGANSNYELG------RGDRVGGWKPKLLP-NLVDVRIIQIANGGYHSLALTDDGKV 112
+++WG N +LG ++ PK + NL V +IQIA G HSLAL +G+V
Sbjct: 1667 VYSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQV 1726
Query: 113 FSWGYGGHGQLG 124
+ WGY +GQ+G
Sbjct: 1727 YGWGYNMNGQIG 1738
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 52/210 (24%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA--LPVPVAAVSCGGFFTMVLTEEG 58
++Y+WGR+EG G+LG+ NE L+ P +VK V V ++ G ++ L G
Sbjct: 1666 QVYSWGRNEG-GQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNG 1724
Query: 59 QLWNWGANSNYELGRG---DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
Q++ WG N N ++G G D ++P+L+P L + K+F
Sbjct: 1725 QVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIE------------------KIFCC 1766
Query: 116 GYGGHGQLG-----------------HSFTQNQK-------VPMVIEALADEFVTHIACG 151
G QLG Q+QK +P ++ V H++CG
Sbjct: 1767 GLNDSNQLGLEKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCG 1826
Query: 152 GSTSAAV----TEKGKLYMWGNAKDSQLGV 177
+ S A+ T+ L+ WG K QLG+
Sbjct: 1827 HNHSLALVVADTKHYMLFAWGMHKHGQLGI 1856
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 58 GQLWNWGANSNYELGR---------GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTD 108
G +++WG N+ ++G ++ PKL+ L D + +A G HS+A+T
Sbjct: 1500 GVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSVAITY 1559
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G V +WG H QLG VP A + ++CG + A+ G+++ WG
Sbjct: 1560 AGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSEHTLALDYIGQVFSWG 1619
Query: 169 NAKDSQLG 176
N + LG
Sbjct: 1620 NGEGGLLG 1627
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Query: 93 IIQIANGGYHSLALTDD-GKVFSWGYGGHGQLGHSFTQNQKV---------PMVIEALAD 142
I+QI Y + + D G +FSWG GQ+G+ + Q + P +I L D
Sbjct: 1482 IVQILEKDYSTFSKKDAVGVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKD 1541
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV-----PGLPVVQPCP 187
VT +ACG S A+T G + WG+ SQLG+ +P P P
Sbjct: 1542 TIVTSVACGYQHSVAITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIP 1591
Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 30 IPSKVKAL-PVPVAAVSCGGFFTMVL----TEEGQLWNWGANSNYELGRGDR-VGGWKPK 83
IP K+ +PV VSCG ++ L T+ L+ WG + + +LG G+ P+
Sbjct: 1808 IPKKMDCFHQIPVLHVSCGHNHSLALVVADTKHYMLFAWGMHKHGQLGIGETGQNSSVPR 1867
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDD 109
+ L DV +A G YHSL + +D
Sbjct: 1868 PITYLQDVTTYSMACGSYHSLVVAND 1893
>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
musculus]
gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
Length = 557
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG D EG++GL + + IP +V + P++ +SCG + + +T +G+L
Sbjct: 198 KLFMWG-DNSEGQIGL------EDKSNVCIPHEV-TVGKPISWISCGYYHSAFVTMDGEL 249
Query: 61 WNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G N +LG + + P+ + + + R+IQ+A GG H++ LT+ V+++G G
Sbjct: 250 YTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK-VVYAFGLG 307
Query: 119 GHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P +IE + D+ + HI+CG + +A +TE G LY +G+ + +LG+
Sbjct: 308 QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGL 367
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 29 SIPSKV---KALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+IPSK +P+ +SCG T ++T +L+ +G+N+ +LG G + KP +
Sbjct: 63 NIPSKFWFKNDIPI---CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCI 119
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADE 143
L ++ A G H+L TD G V++ G GQLG T ++ +V AD
Sbjct: 120 KALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT 179
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++ G +TSAA+TE GKL+MWG+ + Q+G+
Sbjct: 180 -IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL 212
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG + P+ +KAL P V +CG T+V T+ G
Sbjct: 93 KLYMFGSNNW-GQLGLG------SKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGG 145
Query: 60 LWNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ G N+ +LG GD + + D I Q++ G S ALT+DGK+F WG
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT-IKQLSAGANTSAALTEDGKLFMWGD 204
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G N +P E + ++ I+CG SA VT G+LY +G ++ +LG+
Sbjct: 205 NSEGQIGLEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 262
Query: 178 P 178
P
Sbjct: 263 P 263
>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
[Rhipicephalus pulchellus]
Length = 1480
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
ELYTWG+ GRLG G ++ P KV+AL V A G T+ +T++
Sbjct: 740 ELYTWGKGR-YGRLGHG------DSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDD 792
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + L + +I++ G S+ALT G V++WG
Sbjct: 793 DCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGK 852
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P + AL + V IA G A T+ G++Y WG+ + QLG
Sbjct: 853 GDYHRLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDNDEGQLG 911
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 27 GLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+S P+ +++L + V+ GG + L+ EG++++WG + +LG G++ +P+
Sbjct: 653 SVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPR 712
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
++ +L ++ +A GG HS +T G++++WG G +G+LGH + +Q P +EAL+
Sbjct: 713 VIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGW 772
Query: 144 FVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
V +ACG + + VT+ ++ WG+ +LG
Sbjct: 773 RVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLG 807
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P +V L + V V CG F++ LT G +
Sbjct: 795 VWSWG-DGDYGKLGRGG------SDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSV 847
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L ++I IA G H +A TD G+V++WG
Sbjct: 848 YTWGKGDYHRLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDNDE 907
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG P ++ AL + + ++CG + + A
Sbjct: 908 GQLGDGTVNAIHKPRLVAALQGKKINRVSCGSAHTVA 944
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 8/124 (6%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKL-LP--NLVDVRIIQIANGGYHSLALTDDGKVFS 114
G + WG N +LG V G K KL +P L +R IQ+ G A+T DGKV++
Sbjct: 581 GTILGWGHNHRGQLGG---VEGAKVKLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYA 637
Query: 115 WGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKD 172
GYG G+LG T + P ++E+L F+ + GG A++ +G++Y WG D
Sbjct: 638 TGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDD 697
Query: 173 SQLG 176
+LG
Sbjct: 698 GKLG 701
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.139 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,544,260,744
Number of Sequences: 23463169
Number of extensions: 160920156
Number of successful extensions: 408803
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4613
Number of HSP's successfully gapped in prelim test: 1048
Number of HSP's that attempted gapping in prelim test: 343064
Number of HSP's gapped (non-prelim): 30494
length of query: 189
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 55
effective length of database: 9,215,130,721
effective search space: 506832189655
effective search space used: 506832189655
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 72 (32.3 bits)