BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045739
(189 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1
SV=3
Length = 4836
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 572 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ +I++ G S+ALT DG+V+SWG G
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGD 686
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 687 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 745
Query: 180 LPVVQPCPV 188
L V +P P
Sbjct: 746 LRVTKPEPT 754
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3175 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3227
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3228 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3287
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3288 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEE 57
++Y+ G + GRLGLG +G + IP ++ AL V AV GG LT +
Sbjct: 3013 KVYSCG-EATNGRLGLGMS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3066
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G++++WG + +LG R+ KP+L+ L RI IA G HS ALT G++++WG
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3126
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQL 175
G +G+LGH Q P +++ L V +ACG + + A+T++G ++ WG+ +L
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 176 G 176
G
Sbjct: 3187 G 3187
Score = 96.7 bits (239), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 516 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 573
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 634 DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
++ ++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L
Sbjct: 4031 TLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4090
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHI 148
+ ++ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V I
Sbjct: 4091 RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDI 4150
Query: 149 ACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
ACG + + +T+ ++ WG+ +LG
Sbjct: 4151 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2961 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
+++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3014 VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3133
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3120 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3233 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4113 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4165
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4166 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4225
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4226 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4284
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4168 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4220
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4280
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4281 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 626 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ 678
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 739 QCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V V+C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQLVQGLASRNIVKIAAHS 503
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG 585
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 497 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLG 639
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4073
Query: 176 G 176
G
Sbjct: 4074 G 4074
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2944 LIRKKTPGLESTA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3003 KSLFAVTVEGKVYSCGEATNGRLGL 3027
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1
SV=2
Length = 4834
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWGR G G LG G +EA + + + +K L V A G T+ +TE GQ
Sbjct: 571 ELYTWGR----GNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+W+WG +LGRG G PKL+ L D+ ++++ G S+ALT DG+V+SWG G
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+ +LGH ++ + P ++E L + V +A G + A+TE +++ WG+ Q
Sbjct: 686 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDT 744
Query: 180 LPVVQPCP 187
L V +P P
Sbjct: 745 LRVTKPEP 752
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G N IP ++ L V + CG F++ LT+ G +
Sbjct: 3174 VFSWG-DGDFGKLGRGGSEGCN------IPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3226
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG + LG G V KP+++ L +I+ +A G H LA+TD G+V++WG H
Sbjct: 3227 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3286
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQ G+ T + P +++ L + +T +ACG S S A T
Sbjct: 3287 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG +G + IP ++ AL V AV GG LT +G++++WG +
Sbjct: 3022 GRLGLGIS-----SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG R+ KP+L+ L RI IA G HS ALT G++++WG G +G+LGH
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P +++ L V +ACG + + A+T++G ++ WG+ +LG
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3186
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG +G GRLG G E +S S +A V ++CG ++ +T EG+L
Sbjct: 515 EVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQA-GKHVVHIACGSTYSAAITAEGEL 572
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYG 118
+ WG + LG G P L+ L +++I +A +G +LA+T++G+V+SWG G
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 632
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G+LG + K P +IE L D V + CG S A+T+ G++Y WG + +LG
Sbjct: 633 DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 34 VKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
++ + + AV+ GG + L+ EG++++WG + +LG G+R +P+++ +L + +
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV 4093
Query: 94 IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG- 152
+ +A GG HS +T G +++WG G +G+LGHS +++Q P ++EAL V IACG
Sbjct: 4094 VDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSG 4153
Query: 153 -STSAAVTEKGKLYMWGNAKDSQLG 176
+ + +T+ ++ WG+ +LG
Sbjct: 4154 DAQTLCLTDDDTVWSWGDGDYGKLG 4178
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+++ WG ++ + GL + + +PS + L + V V+ G +T EG+
Sbjct: 2960 KVFVWGLNDKDQLGGL-------KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3012
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVD--VRIIQIANGGYHSLALTDDGKVFSWG 116
++ G +N LG G G P+ + L V+ + + +GG H+ ALT DGKVFSWG
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3072
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LGH N P +IEAL + + IACG S SAA+T G+LY WG + +LG
Sbjct: 3073 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3132
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P VK L V V+CG T+ LT+E
Sbjct: 3119 ELYTWGLGE-YGRLGHGDNTTQLK------PKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P+ + L + QI G SLALT G V++WG
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3231
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P V+E L + + H+A G AVT+ G++Y WG+ Q G
Sbjct: 3232 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
+LYTWG+ GR G G +++ P V+AL V ++CG T+ LT++
Sbjct: 4111 DLYTWGK----GRYG---RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 4223
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH + + P ++ L + V IA G TE G++Y WG+ + QLG
Sbjct: 4224 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+ +L + V V CG F++ LT+ G +
Sbjct: 4166 VWSWG-DGDYGKLGRGG------SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4218
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +P+ + L ++I IA G H + T+DG+V++WG
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQLG T + P ++ AL + V +ACG + + A
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++++WG D G+LG G + G P ++ L + V V CG F++ LT++GQ
Sbjct: 625 QVWSWG-DGDYGKLGRGG------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N LG G PKLL L ++I +A G H LALT+D +V SWG
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
Q + + P + L + + IACG + S A
Sbjct: 738 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 775
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--N 98
V ++C ++L+ G+++ NS+ P+L+ L I++IA +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQLVQGLASRNIVKIAAHS 502
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL----ADEFVTHIACGGST 154
G+H LAL G+V+SWG G G+LGH T + P VI A A + V HIACG +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 155 SAAVTEKGKLYMWGNAKDSQLG 176
SAA+T +G+LY WG +LG
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG 584
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 7/144 (4%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL----VDVRII 94
V +AA S G + + L G++++WG LG GD V +PK++ ++
Sbjct: 496 VKIAAHSDGHHY-LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 554
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-- 152
IA G +S A+T +G++++WG G +G+LGH ++++ +PM++ L V +ACG
Sbjct: 555 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 614
Query: 153 STSAAVTEKGKLYMWGNAKDSQLG 176
+ + AVTE G+++ WG+ +LG
Sbjct: 615 AQTLAVTENGQVWSWGDGDYGKLG 638
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G ++ WG N +LG + P L +R +Q+ G A+T DGK+++ GY
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG T++ P ++E++ F+ +A GG A++ +G++Y WG A+D +L
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4071
Query: 176 G 176
G
Sbjct: 4072 G 4072
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 IIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG 152
+I+ G S A T KVF WG QLG KVP E L+ V +A G
Sbjct: 2943 LIRKKAAGLESAA-TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 153 STSAAVTEKGKLYMWGNAKDSQLGV 177
+ AVT +GK+Y G A + +LG+
Sbjct: 3002 KSLFAVTVEGKVYACGEATNGRLGL 3026
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 108/192 (56%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
EL+ WG++ G+LG+G + + P V+ L VP+A +S G +M L+ G
Sbjct: 158 ELFAWGQN-LHGQLGVG-----RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN 211
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+++WG N +LG G P L+ L + ++ +A GG HS LT DG +F++G G
Sbjct: 212 IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGK 271
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLGVP 178
HGQLGH+ TQN+ P ++ L VT IACG T A V++ GK++ +G+ KD QLG
Sbjct: 272 HGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
Query: 179 GL-PVVQPCPVE 189
G + P PV+
Sbjct: 332 GTRDQLMPLPVK 343
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 85/144 (59%), Gaps = 9/144 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG++E G+LGLG ++ PS ++ L V V+CGG + +LT++G L
Sbjct: 212 IYSWGKNEC-GQLGLGHTESKDD------PSLIEGLDNQKVEFVACGGSHSALLTQDGLL 264
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD-GKVFSWGYGG 119
+ +GA + +LG +P L+ LV R+ QIA G +H+LA D GKVFS+G G
Sbjct: 265 FTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324
Query: 120 HGQLGHSFTQNQKVPMVIEALADE 143
GQLG+ T++Q +P+ ++ + E
Sbjct: 325 DGQLGNGGTRDQLMPLPVKVSSSE 348
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 15/156 (9%)
Query: 25 AGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPK 83
+GG P +K + + +V G ++L+ +G+ + + S L R + +
Sbjct: 82 SGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHL-RFESI------ 134
Query: 84 LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--GHSFTQNQKVPMVIEALA 141
L + +IIQI G YHSLAL+ G++F+WG HGQL G F + P ++E LA
Sbjct: 135 ----LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFP-STTTPQIVEHLA 189
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ I+ G + S A++ G +Y WG + QLG+
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGL 225
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG E + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----ECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG +G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG Q Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + QIA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LG+G + E P ++ +L +A++S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGVGDIQSTIE------PRRLDSLTGKKIASLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T +G+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V +IACG S AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 233 GNGQLGL-GSSGNQPTPCR 250
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V ++CG +M + + G
Sbjct: 172 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G++++WG
Sbjct: 225 EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA T+ G +YMWG + + +
Sbjct: 285 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 344
Query: 178 P 178
P
Sbjct: 345 P 345
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLG-----TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT IACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGR-GDRVGGWKPKLLPNL 88
P +V AL + AVSCG T+ L ++GQ++ WG +S+ +LG G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG + + Q P ++++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASFGQLGLG---GIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ ++ G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ ++ R+ + G H++ + DDG V++ G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + ++CG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + +IA G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 106/199 (53%), Gaps = 18/199 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LG+G + E P ++ +L +A++S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGVGDIQSTIE------PRRLDSLTGKKIASLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T +G+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG S AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGVPGLPVVQPCPVE 189
+ QLG+ G QP P
Sbjct: 233 GNGQLGL-GSSGNQPTPCR 250
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G IP +V V +++CG +M + + G
Sbjct: 172 EVFAWGYNNS-GQVGSGS------TANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTG 224
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G P + L +R+ ++A G H+L LTD+G++++WG
Sbjct: 225 EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGAN 284
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG NQ P + D + AC TSAA ++ G +YMWG + + +
Sbjct: 285 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQCRGQSVIL 344
Query: 178 PGL 180
P L
Sbjct: 345 PHL 347
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E++ WG+++ G+LGLG + + P +K+L +P V+ GG + VLT G
Sbjct: 157 EVFCWGQNK-YGQLGLGI-----DCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N +LG D + P LL +L +I+ I G H+ ALT +G VF++G GG
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLGH+ T ++ P + L VT +ACG TSA V G++Y +G + QLG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 31 PSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-RGDRVGGWKPKLLPNL 88
P +V AL + AV+CG T+ L ++GQ++ WG +S+ +LG +G P+ + +L
Sbjct: 75 PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTH 147
D++I+Q+A G YHSLAL+ +VF WG +GQLG Q Q P +I++L
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ 194
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+A GG+ S +T G ++ WG K QLG+
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+ WG + G+LGLG G +E L + V V CG T+ + ++G ++
Sbjct: 1 MLCWG-NASYGQLGLG---GIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 62 NWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
G N +LG+ G KP+ + L I+ +A G H+LAL D G+V++WG
Sbjct: 57 TCGCN---DLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSD 113
Query: 121 GQLGHSFTQN-QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG ++ +VP I++L+D + +ACG S A+++ +++ WG K QLG+
Sbjct: 114 GQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 63 WGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG S +LG G D +P+ V+ ++ + G H++ + DDG V++ G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
GQLGH +++K P + AL + + +ACG + + A+ +KG++Y WG D QLG+ G
Sbjct: 64 GQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQL 60
++ WGR++ G+LGL N+ +P+ +K+L + + CG T LT+EG +
Sbjct: 211 IFGWGRNKF-GQLGL------NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA +LG P+ + L+ + Q+A G H+ A G+++S+G GG
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 120 HGQLGHSFTQNQKVPMVIE 138
+GQLG T N+K P ++
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 99.8 bits (247), Expect = 1e-20, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 21/193 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLS-IPSKVKALP-VPVAAVSCGGFFTMVLTEEG 58
+++ WG EG+LG+G E +S +P+K+KAL + + VSCG + ++ L+E+G
Sbjct: 94 KVFAWGAGS-EGQLGIG------EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDG 146
Query: 59 QLWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+++WG NS +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 147 HVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGS 206
Query: 118 GGHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
GQL G+ + P I AL + V +I+CG +A +TE+G+++ +G Q
Sbjct: 207 NRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQ 266
Query: 175 LGVPGLPVVQPCP 187
L QP P
Sbjct: 267 L--------QPSP 271
Score = 98.2 bits (243), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/152 (34%), Positives = 90/152 (59%), Gaps = 3/152 (1%)
Query: 31 PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNL 88
P ++AL + V VSCG ++ + +G+++ WGA S +LG G+ + + P + L
Sbjct: 65 PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL 124
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTH 147
++IIQ++ G YHSLAL++DG VFSWG GQLG +++Q +P +++L +
Sbjct: 125 AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQ 184
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+A GG+ S A++ G + WG+ + QL + G
Sbjct: 185 VAAGGTHSFALSLTGTSFGWGSNRSGQLALSG 216
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 16/193 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WGR+ EG+LGLG + +IP KVK+L +P+A V+ GG + L+ G
Sbjct: 148 VFSWGRNS-EGQLGLG-----KNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTS 201
Query: 61 WNWGANSNYELG-RGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
+ WG+N + +L G++V +KP + L ++ +I I+ G H+ LT++G+VF++G
Sbjct: 202 FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG 261
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNAKDSQLG 176
GQL S Q+ P +IE + V+ I C T A V G++ G
Sbjct: 262 NSSGQLQPSPRSGQRGPQLIEGIGGR-VSQIECASYHTIAYVYTTGQVVSLGRGPSHTSN 320
Query: 177 VPGLPVVQPCPVE 189
P Q P E
Sbjct: 321 ----PTHQEAPAE 329
Score = 77.8 bits (190), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
Query: 25 AGGLSIPSKVKA--LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP 82
A G P ++KA + + + G +++L ++++ G NS +LG+ +P
Sbjct: 6 AAGSRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERP 65
Query: 83 KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALA 141
+ + L D+ + ++ G HS+A+ GKVF+WG G GQLG F + +P I+ALA
Sbjct: 66 EPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALA 125
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++CG S A++E G ++ WG + QLG+
Sbjct: 126 GIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL 161
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 99.8 bits (247), Expect = 1e-20, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 8 DEGEGRLGL-GPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQLWNWGA 65
D G+LG G RG +P ++AL + V VSCG ++ + +G+++ WGA
Sbjct: 49 DNSRGQLGRRGAQRG-------ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGA 101
Query: 66 NSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ-- 122
S +LG G+ + + PK + L D++IIQ++ G YHSLAL+ D +VFSWG HGQ
Sbjct: 102 GSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG--L 180
LG F +Q P + +L + +A GG+ S A++ G + WG+ QL + G +
Sbjct: 162 LGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV 220
Query: 181 PVVQPCPV 188
PV P+
Sbjct: 221 PVQSNKPL 228
Score = 97.8 bits (242), Expect = 4e-20, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 13/186 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSI-PSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
++ WG EG+LG+G E +S P K+ L + + VSCG + ++ L+++ Q
Sbjct: 96 VFAWGAGS-EGQLGIG------EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQ 148
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G F WG
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSN 208
Query: 119 GHGQL---GHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GQL G + P+ + AL + V +I+CG + +A +T+ GK++ +G+ + QL
Sbjct: 209 SAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Query: 176 GVPGLP 181
G P
Sbjct: 269 GYSPTP 274
Score = 87.4 bits (215), Expect = 5e-17, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 99/175 (56%), Gaps = 12/175 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 148 QVFSWGKNS-HGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 60 LWNWGANSNYEL---GRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+NS +L GR V KP + L ++ ++ I+ G H+ LT DGKVF++G
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG 261
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG-STSAAVTEKGKLYMWGNA 170
GQLG+S T ++ P ++E + D V+ I CG T A V G++ +G+
Sbjct: 262 DNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVVSFGHG 315
Score = 67.0 bits (162), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
WGA+S EL R G +LL Q A+G HSL L + +V S G GQ
Sbjct: 5 WGADSR-ELQRRRTAGSPGAELL---------QAASGERHSLLLLTNHRVLSCGDNSRGQ 54
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
LG Q ++P I+AL V ++CG S AV KG+++ WG + QLG+
Sbjct: 55 LGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109
Score = 66.6 bits (161), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDG 110
+++L ++ + G NS +LGR G P+ + L + + ++ G HSLA+ G
Sbjct: 35 SLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKG 94
Query: 111 KVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
+VF+WG G GQLG F + P I L D + ++CG S A+++ +++ WG
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 170 AKDSQLGV 177
QLG+
Sbjct: 155 NSHGQLGL 162
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLNGKKIACLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 233 GNGQLGL 239
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 172 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 223
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 343
Query: 177 VPGL 180
+P L
Sbjct: 344 LPHL 347
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 17/187 (9%)
Query: 2 LYTWGRDE-------GEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMV 53
LYT DE G LGLG + E P ++ +L +A +S G +V
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIE------PRRLDSLNGKKIACLSYGSGPHIV 112
Query: 54 L-TEEGQLWNWGANSNYELGRGDRVGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGK 111
L T EG+++ WG N+ +LG G G P + NL + ++I++A G YHSL LT DG+
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 112 VFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VF+WGY GQ+G T NQ +P V L ++ V IACG AV + G++Y+WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 171 KDSQLGV 177
+ QLG+
Sbjct: 233 GNGQLGL 239
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRG---PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
E++ WG + G++G G P G + +KV V ++CG M + +
Sbjct: 172 EVFAWGYNNS-GQVGSGSTVNQPIPRRVTG-CLQNKV------VVTIACGQMCCMAVVDT 223
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G+++ WG N N +LG G+ P + L +R+ ++A G H+L LTD+G+V++WG
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLG 176
+GQLG NQ P + D + AC + TSAA T+ G +YMWG + +
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVI 343
Query: 177 VPGL 180
+P L
Sbjct: 344 LPHL 347
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++++WG E +G+LG G L P V+AL + V+CG + ++ +G+
Sbjct: 3093 KVFSWGEGE-DGKLGHG------NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGE 3145
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGY--HSLALTDDGKVFSWGY 117
L+ WG LG GD KPKL+ L R++Q+A G +LALT+DG VFSWG
Sbjct: 3146 LYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3205
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G G+LG ++ P IE L+ V I CG S A+T G+++ WG +LG
Sbjct: 3206 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG 3264
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEGQLWNWGANSN 68
GRLGLG + +P ++ L V AV GG + LT +G++++WG +
Sbjct: 3049 GRLGLGVTHN------VPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED 3102
Query: 69 YELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
+LG G+R KP+L+ L +I +A G HS A++ G++++WG G +G+LGH
Sbjct: 3103 GKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3162
Query: 129 QNQKVPMVIEALADEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
Q P ++ ALA V +ACG + + A+TE G ++ WG+ +LG
Sbjct: 3163 TTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3212
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G G + P +++ L + V + CG F++ LT G++
Sbjct: 3200 VFSWG-DGDFGKLGRGGSEGSD------TPHEIERLSGIGVVQIECGAQFSLALTRAGEV 3252
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
W WG Y LG G KP+ + L R+I +A G H LA+TD G+V++WG H
Sbjct: 3253 WTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDH 3312
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
GQ G T K P ++ L FV +ACG S S A
Sbjct: 3313 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTEE 57
ELYTWG E GRLG G + P V AL V V+CG T+ LTE+
Sbjct: 3145 ELYTWGLGE-YGRLGHGDNTTQLK------PKLVTALAGRRVVQVACGSRDAQTLALTED 3197
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G +++WG +LGRG G P + L + ++QI G SLALT G+V++WG
Sbjct: 3198 GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGK 3257
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G + +LGH Q+ + P I L V H+A G AVT+ G++Y WG+ Q G
Sbjct: 3258 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3316
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V AV+ GG + LT EG+++ WG + +LG G+R+ +PKL+ +L + + IA
Sbjct: 4136 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIAC 4195
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGG--STSA 156
G HS A+T G V +WG G +G+LGH +++Q P ++EAL IACG + +
Sbjct: 4196 GSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTL 4255
Query: 157 AVTEKGKLYMWGNAKDSQLG 176
+T+ ++ WG+ +LG
Sbjct: 4256 CITDDDNVWSWGDGDYGKLG 4275
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLW 61
Y+WG E + RLG G + ++P+K+ AL V +V CG ++ +T G L
Sbjct: 638 YSWGTGE-DHRLGHG------DTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLL 690
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIA--NGGYHSLALTDDGKVFSWGYGG 119
WG + LG G+ P L+ L D ++ +A +G HSLALT +G VF+WG G
Sbjct: 691 TWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGD 750
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
+G+LG+ P+++E+L V + G S A++ +G+LY WG A
Sbjct: 751 YGKLGNGNCNGSLQPILVESLPR--VQRVFAGSQFSVALSSEGQLYTWGKA 799
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+++WG D G+LG G + G +P K+++L + V V CG F++ LT+ G +
Sbjct: 4263 VWSWG-DGDYGKLGRG------GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAV 4315
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG + LG G +PK + L +II IA G H +A +D G+V++WG
Sbjct: 4316 YTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDE 4375
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
GQLG + P ++ AL + + + CG + + A++
Sbjct: 4376 GQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4414
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLG-LGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGG--FFTMVLTE 56
+ TWG+ GR G LG G ++ P V+AL ++CG T+ +T+
Sbjct: 4208 HVLTWGK----GRYGRLGHGDSEDQLR----PKLVEALLGYRAIDIACGSGDAQTLCITD 4259
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
+ +W+WG +LGRG G P + +L + ++++ G S+ALT G V++WG
Sbjct: 4260 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWG 4319
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +LGH + + P + AL + + IA G A ++ G++Y WG+ + QLG
Sbjct: 4320 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 4379
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 32 SKVKALPVPVAAVS----------CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWK 81
+K +A P+P+ V+ C G + + ++WG ++ LG GD
Sbjct: 599 AKPEAEPLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV 658
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
P + L + + G +S A+T G + +WG G + +LGH + ++ +P ++ AL+
Sbjct: 659 PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS 718
Query: 142 DEFVTHIACGG--STSAAVTEKGKLYMWGNAKDSQLG 176
D V +A G + S A+T +G ++ WG+ +LG
Sbjct: 719 DHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 755
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP---VPVAAVSCGGFFTMVLTEEG 58
L TWGR RLG G + S+P+ V AL V A+ G ++ LT EG
Sbjct: 689 LLTWGRGT-YARLGHG------NSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 741
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ WG +LG G+ G +P L+ +L R+ ++ G S+AL+ +G++++WG
Sbjct: 742 LVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKA 799
Query: 119 ---GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
GH QL Q VP ++ +L + + +A + A++ G+++ WG DSQ
Sbjct: 800 TCLGH-QLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGR-NDSQQ 857
Query: 176 GVPGLPVVQP 185
P +P
Sbjct: 858 ICPASVSSEP 867
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG- 99
+ V+C ++L++EG+L+ W L + + +P + + I IA
Sbjct: 574 IKQVACCETQMLILSQEGKLYTW------RLAKPEA----EPLPMEEVAHDVFISIAGHC 623
Query: 100 -GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H LA+ + +SWG G +LGH T + VP I AL V + CG S SAA+
Sbjct: 624 EGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 683
Query: 159 TEKGKLYMWGNAKDSQLG 176
T G L WG ++LG
Sbjct: 684 TCGGNLLTWGRGTYARLG 701
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 63 WGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N +LG +G +V P + +R I IA G ++ DGKV++ G G +
Sbjct: 2991 WGLNDKEQLGGLKGSKVK--VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTN 3048
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G+LG T N +P + L V +A GG + A+T GK++ WG +D +LG
Sbjct: 3049 GRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 3106
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
++ WG D G+LG G N G L P V++LP V V G F++ L+ EGQL+
Sbjct: 743 VFAWG-DGDYGKLGNG-----NCNGSLQ-PILVESLPR-VQRVFAGSQFSVALSSEGQLY 794
Query: 62 NWGANS--NYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
WG + ++L G P+L+ +L RI+ +A H LAL+ G+VF WG
Sbjct: 795 TWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRND 854
Query: 120 HGQLGHSFTQNQ---KVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
Q+ + ++ + P+++ +L + IAC + S T+
Sbjct: 855 SQQICPASVSSEPLLRTPILV-SLPTFPASGIACTSAQSLVWTQSS 899
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 60 LWNWGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ WG N +LG G R+ P L +R +Q+A G A+T DGK+F+ GY
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIK--TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4108
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIAC--GGSTSAAVTEKGKLYMWGNAKDSQL 175
G G+LG + + +P ++ +L FV +A GG A+T +G++Y WG +D +L
Sbjct: 4109 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4168
Query: 176 G 176
G
Sbjct: 4169 G 4169
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
V WG QLG KVP + ++ HIA G + V++ GK+Y G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047
Query: 172 DSQLGV 177
+ +LG+
Sbjct: 3048 NGRLGL 3053
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 106/190 (55%), Gaps = 9/190 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+ +WGR++ G+LGLG + +P K++A + + V+ G T +TE+G
Sbjct: 140 EVQSWGRNQ-NGQLGLG------DTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 192
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ WG LG GDR P+ + + ++ +A G H+++++ G ++++G+
Sbjct: 193 LYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK 252
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPG 179
+GQLGH ++ +P +EAL++ F++ I+ G + A+T GKLY WG K Q+GV G
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-G 311
Query: 180 LPVVQPCPVE 189
+ Q PV+
Sbjct: 312 NNLDQCSPVQ 321
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
E+Y+WG + GRLG G + L P +KAL + + ++CG + +T EG+
Sbjct: 88 EVYSWGWGD-FGRLGHG------NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 140
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ +WG N N +LG GD P+ + +RI +A G H+ A+T+DG ++ WG+G
Sbjct: 141 VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGR 200
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+G LG ++ VP + + E ++ +ACG + +V+ G LY +G +K QLG
Sbjct: 201 YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLG 257
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 4 TWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEG-QLW 61
+WGR E +G+LG G +A P+++ AL + +V+CG T+ ++ G +++
Sbjct: 38 SWGRGE-DGQLGHG------DAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVY 90
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
+WG LG G+ + P + L +RI QIA G H LA+T +G+V SWG +G
Sbjct: 91 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNG 150
Query: 122 QLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLG T++ VP I+A + +A G +AAVTE G LY WG + LG+
Sbjct: 151 QLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 206
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+LY WG G LGLG + +P +V + ++ V+CG T+ ++ G
Sbjct: 192 DLYGWGWGR-YGNLGLG------DRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ +G + +LG GD P L L + I QI+ G H++ALT DGK++ WG+
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 304
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G +Q P+ + D+ V ++CG + AVTE+ ++ WG + QLG+
Sbjct: 305 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGI 362
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Query: 33 KVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR 92
+V A P V +S G ++ L + +WG + +LG GD P L L +
Sbjct: 9 EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ 68
Query: 93 IIQIANGGYHSLALTDDG-KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG 151
I+ + G H++A + G +V+SWG+G G+LGH + + P+ I+AL + IACG
Sbjct: 69 IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLGV 177
S AVT +G++ WG ++ QLG+
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGL 154
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 30 IPSKVKALPVP-VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
IP K++AL ++ +S G TM LT +G+L+ WG N ++G G+ + P +
Sbjct: 266 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 325
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
D +++Q++ G H+LA+T+ VF+WG G +GQLG + ++ P +IEAL+
Sbjct: 326 DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G + L V V+CG +M L +G+++
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + + R++ IA G S+A+ D+G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++ L + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ +++++A G +HS+AL DG+VF+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKV-KALPVP-VAAVSCGGFFTMVLTEEG 58
E++ WG + G++G G P KV L + V ++CG +M + + G
Sbjct: 148 EVFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L V + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIAC-GGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + V AC TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
+L +TD+ +VF +G LG Q+ VP +E L + + ++ G G TE
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ VQ C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVC 122
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y WG + G +LG G G + L V V+CG +M L +G+L+
Sbjct: 96 VYAWGHN-GYSQLG----NGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELF 150
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV-RIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WG N+ ++G G P+ + N + R++ IA G S+A+ D G+V+ WGY G+
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGN 210
Query: 121 GQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG NQ P+ + AL V I CG + + A+T++G LY WG QLG
Sbjct: 211 GQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 96/163 (58%), Gaps = 6/163 (3%)
Query: 19 GRGPNEAGGLSIPSKVKALP-VPVAAVSCG-GFFTMVLTEEGQLWNWGANSNYELGRGDR 76
G G N++ +P K++AL + ++S G G ++ TE+G ++ WG N +LG G
Sbjct: 55 GTGDNQST--LVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTT 112
Query: 77 VGGWKP-KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
G P ++ NL+ ++I++A G +HS+AL DG++F+WGY GQ+G T NQ P
Sbjct: 113 NQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPR 172
Query: 136 -VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
V L + V +IACG ++S AV + G++Y WG + QLG+
Sbjct: 173 KVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGL 215
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL--PVPVAAVSCGGFFTMVLTEEG 58
EL+ WG + G++G G P KV V ++CG +M + + G
Sbjct: 148 ELFAWGYNNC-GQVGSGS------TANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSG 200
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+++ WG N N +LG G+ P + L + + QI G H+LALTD+G +++WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGV 177
+GQLG N P I + + AC + TSAA T+ G +YMWG + + +
Sbjct: 261 TYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 320
Query: 178 PGL 180
P L
Sbjct: 321 PHL 323
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 52 MVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANG-GYHSLALTDDG 110
+ +T+ +++ +G N + LG GD PK L L +I ++ G G H L T+DG
Sbjct: 35 IYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDG 94
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPM-VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
V++WG+ G+ QLG+ T P+ V L + V +ACG S A+ G+L+ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGY 154
Query: 170 AKDSQLGVPGLPVVQPCP 187
Q+G G QP P
Sbjct: 155 NNCGQVG-SGSTANQPTP 171
Score = 37.7 bits (86), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 103 SLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACG-GSTSAAVTEK 161
++ +TD+ +VF +G LG Q+ VP +EAL + + ++ G G TE
Sbjct: 34 AIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTED 93
Query: 162 GKLYMWGNAKDSQLG----VPGLPVVQPC 186
G +Y WG+ SQLG G+ VQ C
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVC 122
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 94.0 bits (232), Expect = 5e-19, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG D EG++GL + +P +V + PV+ +SCG + + +T +G+L+
Sbjct: 161 LFMWG-DNSEGQIGL------KNVSNVCVPQQV-TIGKPVSWISCGYYHSAFVTTDGELY 212
Query: 62 NWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+G N +LG +++ G P+L+ + + ++IQ+A GG H++ LT++ V+++G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 120 HGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P VIE + D+ +++I+CG + +A +T+ G +Y +G+ + +LG+
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGN 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLV-DVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD ++ + +I Q++ G S ALT+DG++F WG
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + V+ I+CG SA VT G+LY++G ++ +LG+P
Sbjct: 168 SEGQIGLKNVSNVCVPQ--QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLP 225
Score = 77.8 bits (190), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
VPV +SCG + V+T +L+ +G+N+ +LG G + KP + L ++ A
Sbjct: 36 VPVH-LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAAC 94
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTHIACGGSTSAA 157
G H+L T+ G V++ G GQLG T+ + VI E + ++ G +TSAA
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 158 VTEKGKLYMWGNAKDSQLGV 177
+TE G+L+MWG+ + Q+G+
Sbjct: 155 LTEDGRLFMWGDNSEGQIGL 174
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 91.7 bits (226), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 103/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
EL+ WG D EG++GL + +P +V + P++ +SCG + + +T EGQL
Sbjct: 160 ELFMWG-DNSEGQIGL------ENVTNVCVPQQV-TVGKPISWISCGYYHSAFVTTEGQL 211
Query: 61 WNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G +LG ++ V P+ +P + +++Q+A GG H++ LT+ V+++G G
Sbjct: 212 YTFGEPECGKLGLPNQLLVNHRMPQPVPG-IPGKVVQVACGGGHTVVLTEKA-VYTFGLG 269
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F VP IE + D+ ++ IACG + +A +T+ G +Y +G+ + +LG+
Sbjct: 270 QFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGL 329
Score = 84.7 bits (208), Expect = 4e-16, Method: Composition-based stats.
Identities = 67/194 (34%), Positives = 99/194 (51%), Gaps = 16/194 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG +S P+ VKAL P V +CG T+V TE G+
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGK 107
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRII-QIANGGYHSLALTDDGKVFSWGYG 118
++ G N+ +LG GD L+ R I Q++ G S ALT+DG++F WG
Sbjct: 108 VYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDN 167
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQ+G N VP + + ++ I+CG SA VT +G+LY +G + +LG+P
Sbjct: 168 SEGQIGLENVTNVCVPQ--QVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLP 225
Query: 179 GLPVV-----QPCP 187
+V QP P
Sbjct: 226 NQLLVNHRMPQPVP 239
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 29 SIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNL 88
+IPSK +SCG T V+T +L+ +G+N+ +LG G + KP + L
Sbjct: 25 NIPSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKAL 84
Query: 89 VDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF-VTH 147
++ A G H+L T+ GKV++ G GQLG T+ + +I + +
Sbjct: 85 KPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQ 144
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
++ G +TSAA+TE G+L+MWG+ + Q+G+
Sbjct: 145 LSAGSNTSAALTEDGELFMWGDNSEGQIGL 174
Score = 66.6 bits (161), Expect = 9e-11, Method: Composition-based stats.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEA-GGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
+LYT+G E G+LGL PN+ +P V +P V V+CGG T+VLTE+
Sbjct: 210 QLYTFGEPEC-GKLGL-----PNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKA- 262
Query: 60 LWNWGANSNYELGRGDRVGGWK-PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
++ +G +LG G + PK + ++ D +I IA G H+ +TD G ++++G G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Query: 119 GHGQLGHSF--TQNQKVPMVIEALADEFVTHIACGG 152
HG+LG + NQ +P + V ++CGG
Sbjct: 323 RHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGG 358
Score = 30.0 bits (66), Expect = 8.4, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+YT+G + G+LGLG S+P ++ + ++ ++CG T ++T+ G +
Sbjct: 263 VYTFGLGQF-GQLGLGTFLFET-----SVPKAIEHIKDQKISFIACGENHTALITDMGLM 316
Query: 61 WNWGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLAL 106
+ +G + +LG G + + P L N + + ++ GG H+L
Sbjct: 317 YTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVF 364
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V V+CGG ++ L E+G+++ G N+ +LG +R G KP+ + L D II +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREGN-KPEQIGALADQHIIHVACGE 93
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSAAVT 159
HSLAL+D G++FSWG G GQLG T++ VP +I+ L + + ++CG A+
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 160 EKGKLYMWGNAKDSQLGV 177
G+ + WG QLG+
Sbjct: 154 ADGQFFTWGKNSHGQLGL 171
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WG +G+LGL +++P ++ L + VSCG + + L +GQ
Sbjct: 104 QLFSWGAG-SDGQLGLMTTED-----SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Query: 60 LWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ WG NS+ +LG G P+ + +L + + Q+A GG HS AL+ G VF WG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
GQLG S ++++ P ++ L + V +I+CG +A +T+ G ++ +G QLG
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 9/192 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+ +TWG++ G+LGLG P++A P +V++L +P+A V+ GG + L+ G
Sbjct: 157 QFFTWGKN-SHGQLGLGK-EFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
++ WG N+ +LG D P + L +++ I+ G H+ LT G VF++G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGS-TSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLGH ++ P + L VT IACG T A V G +Y +G QLG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 179 GLPVVQ-PCPVE 189
V+ P PV+
Sbjct: 331 HTCNVKCPSPVK 342
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 1 ELYTWGRDEGEGRLGL-GPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
E+YT G + +G+LG G P + G L+ + V+CG ++ L++ GQ
Sbjct: 54 EVYTCGLNT-KGQLGHEREGNKPEQIGALADQH--------IIHVACGESHSLALSDRGQ 104
Query: 60 LWNWGANSNYELG---RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L++WGA S+ +LG D V P+L+ L I+Q++ G +H LAL DG+ F+WG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
HGQLG F +Q P + +L + +A GG+ S A++ G ++ WG Q
Sbjct: 163 KNSHGQLGLGKEFP-SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 221
Query: 175 LGV 177
LG+
Sbjct: 222 LGL 224
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
+P++ + D + ++A GG HS+ L +DG+V++ G GQLGH N+ P I AL
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGAL 81
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
AD+ + H+ACG S S A++++G+L+ WG D QLG+
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV-PVAAVSCGGFFTMVLTEEGQL 60
++ WG + G+LGL + P VK L V +SCG T VLT+ G +
Sbjct: 211 VFGWGMNNA-GQLGLSDEKDRES------PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALT-DDGKVFSWGYGG 119
+ +GA S +LG P+ + L+ + QIA G H+LA G ++++G G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 120 HGQLGHSFTQNQKVPMVIE-----------ALADEFVTHIA----CGGSTSAAVTEKGKL 164
GQLG T N K P ++ A AD F HI GG + + K +
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYEN 383
Query: 165 Y 165
Y
Sbjct: 384 Y 384
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 90.9 bits (224), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 13/180 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ WG D EG++GL + + IP +V + P++ +SCG + + +T +G+L
Sbjct: 160 KLFMWG-DNSEGQIGL------EDKSNVCIPHEV-TVGKPISWISCGYYHSAFVTMDGEL 211
Query: 61 WNWGANSNYELGRGDRV--GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ +G N +LG + + P+ + + + R+IQ+A GG H++ LT+ V+++G G
Sbjct: 212 YTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK-VVYAFGLG 269
Query: 119 GHGQLG-HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQLG +F P +IE + D+ + HI+CG + +A +TE G LY +G+ + +LG+
Sbjct: 270 QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGL 329
Score = 78.6 bits (192), Expect = 2e-14, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+LY +G + G+LGLG + P+ +KAL P V +CG T+V T+ G
Sbjct: 55 KLYMFGSNNW-GQLGLG------SKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGG 107
Query: 60 LWNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
++ G N+ +LG GD + + D I Q++ G S ALT+DGK+F WG
Sbjct: 108 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT-IKQLSAGANTSAALTEDGKLFMWGD 166
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
GQ+G N +P E + ++ I+CG SA VT G+LY +G ++ +LG+
Sbjct: 167 NSEGQIGLEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 224
Query: 178 P 178
P
Sbjct: 225 P 225
Score = 77.8 bits (190), Expect = 4e-14, Method: Composition-based stats.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 29 SIPSKV---KALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL 85
+IPSK +P+ +SCG T ++T +L+ +G+N+ +LG G + KP +
Sbjct: 25 NIPSKFWFKNDIPI---CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCI 81
Query: 86 PNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKV--PMVIEALADE 143
L ++ A G H+L TD G V++ G GQLG T ++ +V AD
Sbjct: 82 KALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT 141
Query: 144 FVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+ ++ G +TSAA+TE GKL+MWG+ + Q+G+
Sbjct: 142 -IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL 174
Score = 32.3 bits (72), Expect = 1.8, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIAN 98
+ +SCG T ++TE G L+ +G + +LG G + + P L N + + IA
Sbjct: 297 ICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIAC 356
Query: 99 GGYHSLAL 106
GG H L
Sbjct: 357 GGCHMLVF 364
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 ELYTWGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQ 59
ELYTWG EG+ GRLG G N IP+ VK + V VSCG T+ L+++G+
Sbjct: 531 ELYTWG--EGDFGRLGHGDSNSRN------IPTLVKDIS-NVGEVSCGSSHTIALSKDGR 581
Query: 60 -LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+W++G N +LG GD +KPK++ L + I ++ G SLALT G+V++WG G
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S + P +IE LA + ++ G S A++ ++Y WGN Q G
Sbjct: 642 ACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WG D G+LG G + P + K V VS G + +TE+G+L
Sbjct: 478 EVFSWG-DGDYGKLGHGNSSTQKYPKLIQGPLQGKV----VVCVSAGYRHSAAVTEDGEL 532
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGK-VFSWGYGG 119
+ WG LG GD P L+ ++ +V +++ G H++AL+ DG+ V+S+G G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 120 HGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
+G+LGH T P VIEAL F+ + G +S A+T G++Y WG
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y WG GR G G N + PS +A V CG T V+ G +
Sbjct: 3998 DVYLWG----AGRHGQLAEAGRNVMVPAAAPSFSQA-----QQVICGQNCTFVIQANGTV 4048
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNL---VDVRIIQIANGGYHSLALTDDGKVFSWGY 117
G S LG+G+ ++ L V +++ HS+ALT+ G+VFSWG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LGH + Q+ P IEAL E V ++CG SA VT GKL+ +GN +LG+
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4168
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQLWNWGANSNYE 70
GRLG G ++ L++ S ++ V SCG +M LTE G++++WG +
Sbjct: 4057 GRLGQG---NSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
LG G+ +P+ + L ++Q++ G HS +T DGK+F++G G +G+LG T N
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 131 QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKL-YMWGNAKDSQLGV 177
+K+P + AL + +ACG + + AV+ G + + +G+ +LG+
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL 4221
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 WGRDEGE-GRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWN 62
W +G+ G+LGLG + S P K+ L + + V+CG F++ LT++G ++
Sbjct: 4209 WAFGDGDYGKLGLG------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 63 WGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
+G + L G +P+ +P L V I +A G H+LAL +G V++WG GQ
Sbjct: 4263 FGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQ 4322
Query: 123 LGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
LG T + + P ++ L + V I+ G SAA T
Sbjct: 4323 LGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 1 ELYTWGRD------EGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVL 54
E+Y WG + EG L P P+ + +I + G + T V+
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--------------GQYCTFVI 418
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLL---PNLVDVRIIQIANGGYHSLALTDDGK 111
+ +G + G S LG GD K L P+ ++ H+LA T +G+
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEA-LADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
VFSWG G +G+LGH + QK P +I+ L + V ++ G SAAVTE G+LY WG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 171 KDSQLG 176
+LG
Sbjct: 539 DFGRLG 544
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L+T+G + GRLGLG +P +V AL + V+CG T+ ++ +G
Sbjct: 4154 KLFTFGNGD-YGRLGLG------NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4206
Query: 60 L-WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYG 118
+ W +G +LG G+ P+ + L + I ++A G S+ALT DG V+++G
Sbjct: 4207 MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4266
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L +N P I LA + +A G + A+ G +Y WG+ + QLG+
Sbjct: 4267 RLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEGQ 59
++Y WG G G G +EA L P ++ L + VS G + L+ + +
Sbjct: 634 QVYAWG-------CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNE 685
Query: 60 LWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSL---ALTDDGKVFSW 115
++ WG NS + G+G+ G KPK + L + I QI+ G HSL AL D +V +W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 86.7 bits (213), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 78/139 (56%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V + +VSCG FT LT+ G + +G+ SN LG G+ +PK++ L+ ++Q++
Sbjct: 398 VTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSC 457
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H LA+T++ +VFSWG G +G+LG + + P + AD + CG S +
Sbjct: 458 GASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIM 517
Query: 159 TEKGKLYMWGNAKDSQLGV 177
+ + ++ GN + ++LG+
Sbjct: 518 STQHQILACGNNRFNKLGL 536
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 22/190 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+++WGR + GRLGL N +S+P+ +A V CG +M+++ + Q+
Sbjct: 470 EVFSWGRGDN-GRLGLATQDSHNCPQQVSLPADFEA-----QRVLCGVDCSMIMSTQHQI 523
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN--------------GGYHSLAL 106
G N +LG G +P + +V + Q+ G HS+A+
Sbjct: 524 LACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAV 583
Query: 107 TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
T+ G+ F++G HGQLG S ++ +VP + L + +T ACG + + A+ +G++Y
Sbjct: 584 TEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGL--QGITMAACGDAFTLAIGAEGEVYT 641
Query: 167 WGNAKDSQLG 176
WG +LG
Sbjct: 642 WGKGARGRLG 651
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 26 GGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-----RVGGW 80
G+S P ++ L V VS G M +T+ G+L W A S +G G+ V
Sbjct: 327 SGISTPLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITWEAPS---VGSGEPTLPGAVEQM 383
Query: 81 KPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMV 136
+P+ + ++ V I ++ G + LTD G + ++G G +G LGH + P +
Sbjct: 384 QPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKI 443
Query: 137 IEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
+EAL + ++CG S AVT + +++ WG + +LG+
Sbjct: 444 VEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGL 484
Score = 33.1 bits (74), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+ +T+G ++ G+LG R +P +V L + +CG FT+ + EG++
Sbjct: 588 QCFTFGSNQ-HGQLGCSHRRSSR------VPYQVSGLQ-GITMAACGDAFTLAIGAEGEV 639
Query: 61 WNWGANSNYELGRGD 75
+ WG + LGR +
Sbjct: 640 YTWGKGARGRLGRKE 654
>sp|Q8IS20|GEFC_DICDI Ras guanine nucleotide exchange factor C OS=Dictyostelium
discoideum GN=gefC PE=2 SV=1
Length = 1457
Score = 83.6 bits (205), Expect = 8e-16, Method: Composition-based stats.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 32/177 (18%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG---------------------------- 72
+ V+ G + ++LTE G +W WG+NSN +LG
Sbjct: 335 IKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQQQQLQQQQSMSSLQPSASS 394
Query: 73 RGDRVGGWKPKLLPNLVDVRIIQ-IANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ 131
+ P +V+++ ++ IA G ++ ALT+ G+++ WG HG+LG T ++
Sbjct: 395 SSPSSSSLQTTCTPKMVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDR 454
Query: 132 KVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPV 188
+ P + L +E V+ IAC + SA TE GK+Y+WG + D + +P P P+
Sbjct: 455 RTPTRVIRLKNEVVSTIACSSTHSACYTESGKMYVWGQS-DETGKIQAIP--SPLPI 508
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 22/156 (14%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V ++ G T LTE G+L+ WG N + ELG GD + P + L + + IA
Sbjct: 416 VKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSS 475
Query: 101 YHSLALTDDGKVFSWGYGG--------------HGQLGHSFTQNQKVPMVIEALADEFVT 146
HS T+ GK++ WG H L + +
Sbjct: 476 THSACYTESGKMYVWGQSDETGKIQAIPSPLPIHSYLDREIKSPNGGGVGGFFGGGGKIK 535
Query: 147 HIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPV 182
+ACG A +T+ G+++MW +PG+P+
Sbjct: 536 QLACGQRCIAVLTQMGEVFMW--------EIPGIPI 563
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 36/179 (20%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA-----------LPVPVAAVSCGGF 49
++Y WG+ + G++ P P + + ++K+ + ++CG
Sbjct: 486 KMYVWGQSDETGKIQAIPSPLPIHS---YLDREIKSPNGGGVGGFFGGGGKIKQLACGQR 542
Query: 50 FTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD 109
VLT+ G+++ W + G L L + + I G +H + LTD
Sbjct: 543 CIAVLTQMGEVFMW------------EIPGIPIPLRNALENHSVRNIVMGNFHLVCLTDS 590
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL--------ADEFVTHIACGGSTSAAVTE 160
G+V + G GQLG + +N+ P +++ L +DEFV IA G S A+ E
Sbjct: 591 GEVVTIGRNKTGQLGRTDAENE--PGIVKQLSFDPDGLNSDEFVVSIAAGEFHSVALVE 647
Score = 34.7 bits (78), Expect = 0.40, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 112 VFSWGYGGHGQLG------HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLY 165
VF++G+G +G LG + QKV E D+ V +ACG + VT+ LY
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEI--DKRVKKVACGSYHTVFVTDDEHLY 60
Query: 166 MWGNAKDSQLG 176
+ G KD + G
Sbjct: 61 ICGIKKDPKHG 71
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 38/202 (18%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+YT+G ++ G+LG G N+ + P+ ++ P+ V+CG F+M++ +G L+
Sbjct: 196 VYTFGENK-LGQLGQG-----NQTDAVLSPATIQYNGQPIVKVACGAEFSMIVDCKGNLY 249
Query: 62 NWGANSNYELG---------RGDRVGGWKPKLLPNLVDVRIIQ----------------I 96
++G +LG R R+ + +L+P V + I + +
Sbjct: 250 SFGCPEYGQLGHNSDGKFIARAQRIE-FDCELIPRRVAIFIEKTKDGQVLPVPNVVARDV 308
Query: 97 ANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF----VTHIACGG 152
A G H+L L +VFSWG+GG+G+LGH+ +++ VP +++ +F T I CG
Sbjct: 309 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF--DFPGRGATQIYCGY 366
Query: 153 STSAAVTEKGKLYMWGNAKDSQ 174
S A++E G L+ WG S+
Sbjct: 367 QCSFALSEMGGLFFWGVTNTSR 388
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 6/156 (3%)
Query: 21 GPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW 80
GP+ G LS + P AA S +++T EG+LW+WG N +LG GD
Sbjct: 111 GPHRYGCLSDVQVSCVVSGPCAAHS------LIITTEGKLWSWGRNDKGQLGHGDTKRLE 164
Query: 81 KPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL 140
PKL+ L + I+ A G H+LALT++G V+++G GQLG + +
Sbjct: 165 APKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQY 224
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ + +ACG S V KG LY +G + QLG
Sbjct: 225 NGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLG 260
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 80 WKPKLLPNLVDVRIIQIANG--GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
W P L DV++ + +G HSL +T +GK++SWG GQLGH T+ + P +I
Sbjct: 110 WGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLI 169
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
E L +E + ACG + + A+TE G +Y +G K QLG
Sbjct: 170 EGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLG 208
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 38/196 (19%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKAL-PVPVAAVSCGGFFTMVLTEEGQ 59
+L++WGR++ +G+LG G + L P ++ L + A +CG T+ LTE G
Sbjct: 143 KLWSWGRND-KGQLGHG------DTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGT 195
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR---IIQIANGGYHSLALTDDGKVFSWG 116
++ +G N +LG+G++ L P + I+++A G S+ + G ++S+G
Sbjct: 196 VYTFGENKLGQLGQGNQTDAV---LSPATIQYNGQPIVKVACGAEFSMIVDCKGNLYSFG 252
Query: 117 YGGHGQLGHS----FTQN------------QKVPMVIEALADEFV--------THIACGG 152
+GQLGH+ F ++V + IE D V +ACG
Sbjct: 253 CPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGA 312
Query: 153 STSAAVTEKGKLYMWG 168
+ + + + +++ WG
Sbjct: 313 NHTLVLDSQKRVFSWG 328
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V + SC ++++T EG+LW+WG N +LG GD P+L+ L I+ A G
Sbjct: 151 VVSGSCAAH-SLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGR 209
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD-EFVTHIACGGSTSAAVT 159
H+LALTD G VF++G GQLG Q VP + + + + +T +ACG S +
Sbjct: 210 NHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEFSMLMD 268
Query: 160 EKGKLYMWGNAKDSQLG 176
KG LY +G + QLG
Sbjct: 269 CKGNLYSFGCPEYGQLG 285
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 37/192 (19%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
G+LGLG N+ + P+++ P+ ++CG F+M++ +G L+++G +L
Sbjct: 230 GQLGLG-----NQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQL 284
Query: 72 G---------RGDRVGGWKPKLLPNLV----------------DVRIIQIANGGYHSLAL 106
G R R+ + +L+P V +V + +A G H+L L
Sbjct: 285 GHNSDGKFIARAQRIE-YDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 343
Query: 107 TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF----VTHIACGGSTSAAVTEKG 162
+VFSWG+GG+G+LGH+ +++ VP +++ +F T I G + S AV+E G
Sbjct: 344 DSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF--DFPGRGATQIYAGYTCSFAVSEVG 401
Query: 163 KLYMWGNAKDSQ 174
L+ WG S+
Sbjct: 402 GLFFWGATNTSR 413
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 80 WKPKLLPNLVDVRIIQIANG--GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
W P L VR+ + +G HSL +T +GK++SWG GQLGH T+ + P +I
Sbjct: 135 WGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI 194
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
EAL+ E + ACG + + A+T+ G ++ +G K QLG+ P P +
Sbjct: 195 EALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQ 246
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 42/198 (21%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
+L++WGR+E +G+LG G + + P ++AL + +CG T+ LT+ G
Sbjct: 168 KLWSWGRNE-KGQLGHG------DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 220
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-----IIQIANGGYHSLALTDDGKVFS 114
++ +G N +LG G++ +P+ + I ++A G S+ + G ++S
Sbjct: 221 VFAFGENKMGQLGLGNQTDA-----VPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYS 275
Query: 115 WGYGGHGQLGHS----FTQN------------QKVPMVIEALAD--------EFVTHIAC 150
+G +GQLGH+ F ++V + IE D V +AC
Sbjct: 276 FGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVAC 335
Query: 151 GGSTSAAVTEKGKLYMWG 168
G + + + + +++ WG
Sbjct: 336 GANHTLVLDSQKRVFSWG 353
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 74/142 (52%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V + V+CG FFT LT+ G + +G+ SN LG G +P ++ L+ ++Q+A
Sbjct: 391 VTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVAC 450
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H LAL+ + ++F+WG G G+LG ++ P + + + CG +S +
Sbjct: 451 GASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMIL 510
Query: 159 TEKGKLYMWGNAKDSQLGVPGL 180
T G+ G+ + ++LG+ L
Sbjct: 511 TVPGQALACGSNRFNKLGLDHL 532
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 32/196 (16%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP----VAAVSCGGFFTMVLTE 56
EL+ WGR + GRLGLG S P +V P+P V CG +M+LT
Sbjct: 463 ELFAWGRGDS-GRLGLGTRESH------SCPQQV---PMPPGQEAQRVVCGIDSSMILTV 512
Query: 57 EGQLWNWGANSNYELGRGDRVGGWKPKLLPN----------------LVDVRIIQIANGG 100
GQ G+N +LG G +P +P+ L ++ I G
Sbjct: 513 PGQALACGSNRFNKLGLDHLSLGEEP--VPHQQVEEALSFTLLGSAPLDQEPLLSIDLGT 570
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
HS A+T G +++G HGQLG + + + P ++ L + +ACG + + A+
Sbjct: 571 AHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGA 630
Query: 161 KGKLYMWGNAKDSQLG 176
+ ++Y WG +LG
Sbjct: 631 ESEVYSWGKGARGRLG 646
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 26 GGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG------DRVGG 79
GGL P ++ L V V+ G +T G+L W A LG G V
Sbjct: 319 GGLGTPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPP---LGAGGGSLLPGAVEQ 375
Query: 80 WKPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
+P+ + ++ V I +A G + + LTD G + ++G G +G LGH + P
Sbjct: 376 PQPQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPT 435
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCP 187
++EAL + +ACG S A++ + +L+ WG +LG+ G CP
Sbjct: 436 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGL-GTRESHSCP 486
Score = 38.5 bits (88), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW-----GYGGHGQLGHSFTQNQK--VP 134
P LP +++ ++Q+A G +T G++ W G GG L + Q Q +
Sbjct: 324 PLRLP-MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFIS 382
Query: 135 MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLP-VVQPCPVE 189
+E + + H+ACG +A +T++G + +G+ + LG L + QP VE
Sbjct: 383 RFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVE 438
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V + SC ++++T EG+LW+WG N +LG GD P+L+ L I+ A G
Sbjct: 153 VVSGSCAAH-SLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGR 211
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD-EFVTHIACGGSTSAAVT 159
H+LALT+ G VF++G GQLG Q VP + + + + +T +ACG S +
Sbjct: 212 NHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEFSMIMD 270
Query: 160 EKGKLYMWGNAKDSQLG 176
KG LY +G + QLG
Sbjct: 271 CKGNLYSFGCPEYGQLG 287
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 37/192 (19%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
G+LGLG N+ + P+++ P+ ++CG F+M++ +G L+++G +L
Sbjct: 232 GQLGLG-----NQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQL 286
Query: 72 G---------RGDRVGGWKPKLLPNLV----------------DVRIIQIANGGYHSLAL 106
G R R+ + +L+P V +V + +A G H+L L
Sbjct: 287 GHNSDGKFIARAQRIE-YDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 345
Query: 107 TDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF----VTHIACGGSTSAAVTEKG 162
+VFSWG+GG+G+LGH+ +++ VP +++ +F + I G + S AV+E G
Sbjct: 346 DSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF--DFPGRGASQIYAGYTCSFAVSEVG 403
Query: 163 KLYMWGNAKDSQ 174
L+ WG S+
Sbjct: 404 GLFFWGATNTSR 415
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 80 WKPKLLPNLVDVRIIQIANG--GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
W P L VR+ + +G HSL +T +GK++SWG GQLGH T+ + P +I
Sbjct: 137 WGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI 196
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
E L+ E + ACG + + A+TE G ++ +G K QLG+ P P +
Sbjct: 197 EGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQ 248
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 42/198 (21%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPV-AAVSCGGFFTMVLTEEGQ 59
+L++WGR+E +G+LG G + + P ++ L V + +CG T+ LTE G
Sbjct: 170 KLWSWGRNE-KGQLGHG------DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 222
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-----IIQIANGGYHSLALTDDGKVFS 114
++ +G N +LG G++ +P+ + I ++A G S+ + G ++S
Sbjct: 223 VFAFGENKMGQLGLGNQTDA-----VPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYS 277
Query: 115 WGYGGHGQLGHS----FTQN------------QKVPMVIEALAD--------EFVTHIAC 150
+G +GQLGH+ F ++V + IE D V +AC
Sbjct: 278 FGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVAC 337
Query: 151 GGSTSAAVTEKGKLYMWG 168
G + + + + +++ WG
Sbjct: 338 GANHTLVLDSQKRVFSWG 355
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 5/180 (2%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELYTW +G +L G G + P V+ L V VSCG FT+ +T+EGQ
Sbjct: 371 ELYTWVNMQGGSKLHGQLGHG--DRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQ 428
Query: 60 LWNWGANSNYELGRGDRVGG--WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGY 117
L+++G++ LG G +P L+ ++ + Q++ G H +ALT V+SWG
Sbjct: 429 LYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGC 488
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
G +G+LG + P +E + ++ CG S +T GK+ G + ++LG+
Sbjct: 489 GEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGL 548
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 17/190 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+LY++G D G LG+ G L + L PV VSCG M LT +
Sbjct: 428 QLYSFGSDY-YGCLGVNQSAGSEVLEPLLVDF---FLNEPVDQVSCGDSHIMALTRSKSV 483
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
++WG LG + P+ + + I+ + G S LT GKV + G H
Sbjct: 484 YSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEH 543
Query: 121 GQLG-HSFTQN-------QKVPMVIE-ALADEF----VTHIACGGSTSAAVTEKGKLYMW 167
+LG + +T Q+VP LA + + I+ G + +AA+ E+G+L +
Sbjct: 544 NKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTF 603
Query: 168 GNAKDSQLGV 177
G+ K QLGV
Sbjct: 604 GSNKCGQLGV 613
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 22/191 (11%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQL 60
+Y+WG E GRLGL + + P KV+ + + V CG + +LT G++
Sbjct: 483 VYSWGCGE-YGRLGL------DSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKV 535
Query: 61 WNWGANSNYELGRGDRVGGW-------------KPKLLPNLVDVRIIQIANGGYHSLALT 107
G N + +LG G L L +I I+ G H+ A+
Sbjct: 536 LACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAID 595
Query: 108 DDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
+ G++ ++G GQLG + ++ + ++ L + V ++CG + A T ++
Sbjct: 596 ERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFA 655
Query: 167 WGNAKDSQLGV 177
WGN + +L +
Sbjct: 656 WGNGGNGRLAM 666
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD-----VRIIQ 95
+ ++S G T + E G+L +G+N +LG VG ++ L NL+ ++I+
Sbjct: 581 IRSISPGRTHTAAIDERGRLLTFGSNKCGQLG----VGDYRKHLGINLLGGPLGGKQVIR 636
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK 132
++ G + A T D +F+WG GG+G+L + T N++
Sbjct: 637 VSCGDEFTTAATADNHIFAWGNGGNGRL--AMTPNER 671
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 38/202 (18%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+Y +G ++ G+LGLG N+ + P+++ P+ V+CG F+M++ +G L+
Sbjct: 214 VYAFGENK-MGQLGLG-----NKTDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGNLY 267
Query: 62 NWGANSNYELG---------RGDRVGGWKPKLLPNLV----------------DVRIIQI 96
++G +LG R R+ + +L+ + +V + I
Sbjct: 268 SFGCPEYGQLGHNSDGKYIARAQRIE-YDCELIARRIAIFIEKTKDGQILPVPNVVVRDI 326
Query: 97 ANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEF----VTHIACGG 152
A G HSL L +VFSWG+GG+G+LGHS +++ VP +++ +F I G
Sbjct: 327 ACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLF--DFPGRGAAQIYAGA 384
Query: 153 STSAAVTEKGKLYMWGNAKDSQ 174
+ S AV+E G L+ WG S+
Sbjct: 385 TCSFAVSEMGGLFFWGATNTSR 406
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
VA+ SC ++++T EG+LW+WG N +LG GD PKL+ +L + A G
Sbjct: 144 VASGSCAAH-SLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGR 202
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALAD-EFVTHIACGGSTSAAVT 159
H+LALT++G V+++G GQLG + VP + L + + +T +ACG S +
Sbjct: 203 NHTLALTENGSVYAFGENKMGQLGLG-NKTDAVPSPAQILYNGQPITKVACGAEFSMIMD 261
Query: 160 EKGKLYMWGNAKDSQLG 176
KG LY +G + QLG
Sbjct: 262 CKGNLYSFGCPEYGQLG 278
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 80 WKPKLLPNLVDVRIIQIANG--GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
W P L V++ +A+G HSL +T +GK++SWG GQLGH + VP +I
Sbjct: 128 WGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLI 187
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPCPVE 189
E+L E H ACG + + A+TE G +Y +G K QLG+ P P +
Sbjct: 188 ESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQ 239
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 42/198 (21%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPV-AAVSCGGFFTMVLTEEGQ 59
+L++WGR++ +G+LG G + + +P +++L V +CG T+ LTE G
Sbjct: 161 KLWSWGRND-KGQLGHG------DIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGS 213
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-----IIQIANGGYHSLALTDDGKVFS 114
++ +G N +LG G+ K +P+ + I ++A G S+ + G ++S
Sbjct: 214 VYAFGENKMGQLGLGN-----KTDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGNLYS 268
Query: 115 WGYGGHGQLGHS-----FTQNQKVPMVIEALADEF-------------------VTHIAC 150
+G +GQLGH+ + Q++ E +A V IAC
Sbjct: 269 FGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIAC 328
Query: 151 GGSTSAAVTEKGKLYMWG 168
G + S + + +++ WG
Sbjct: 329 GINHSLILDSQKRVFSWG 346
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 8/137 (5%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV--RIIQIANGGY 101
+S GG +VLT+ G ++++G N LGR G + K P+L+D+ + + I+ G
Sbjct: 79 ISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESK--PDLIDLPGKALCISAGDS 136
Query: 102 HSLALTDDGKVFSWG--YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
HS L +DG+VF+WG HG +G + N++ P I+ + IA G +T
Sbjct: 137 HSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTP--IDLMEGTVCCSIASGADHLVILT 194
Query: 160 EKGKLYMWGNAKDSQLG 176
GK++ G A+ QLG
Sbjct: 195 TAGKVFTVGCAEQGQLG 211
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
Query: 40 PVAAVSCGGFFTMVLTEEGQ-LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ-IA 97
P A+ + T + + Q +W G N+ +L G + L P +++ I+ IA
Sbjct: 242 PFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAH--ETKGKEFALTPIKTELKDIRHIA 299
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADEFVTHIACGGSTSA 156
G +H++ LT D K G +G+LG ++ + P +++ L ++ V+ + CG S
Sbjct: 300 GGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVS-VGCGEVCSY 358
Query: 157 AVTEKGKLYMWGNAKDSQLGV 177
AVT GKLY WG+ ++QLGV
Sbjct: 359 AVTIDGKLYSWGSGVNNQLGV 379
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 85 LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN--QKVPMVIEALAD 142
+P+ VD I+ GG H+L LT G ++S+G G LG +++ + P +I+
Sbjct: 73 IPDAVD-----ISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGK 127
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
I+ G S SA + E G+++ WG+ +DS
Sbjct: 128 ALC--ISAGDSHSACLLEDGRVFAWGSFRDSH 157
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y++G ++ EG LG R +E G S P + LP +S G + L E+G++
Sbjct: 94 DIYSFGCND-EGALG----RDTSEDGSESKPDLID-LPGKALCISAGDSHSACLLEDGRV 147
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ WG+ + G + G K + + IA+G H + LT GKVF+ G
Sbjct: 148 FAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQ 207
Query: 121 GQLGH 125
GQLG
Sbjct: 208 GQLGR 212
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
GRLGLG + E P+ VK L + +V CG + +T +G+L++WG+ N +L
Sbjct: 323 GRLGLGDVKDVVEK-----PTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQL 377
Query: 72 GRGDRVGGWKPKLL--PNLVDVRIIQIANGGYHSLAL 106
G GD +P ++ N ++ + GG H++ L
Sbjct: 378 GVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFL 414
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGD-RVGGWKPKLLPNLVDVRIIQIANG 99
+ ++ G T++LT + + G LG GD + KP ++ L + +I+ + G
Sbjct: 295 IRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE-KIVSVGCG 353
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVI 137
S A+T DGK++SWG G + QLG ++ P+V+
Sbjct: 354 EVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVV 391
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 76/142 (53%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIAN 98
V + V+CG FT LT+ G + +G+ SN LG G+ +P ++ L+ ++Q+A
Sbjct: 397 VTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVAC 456
Query: 99 GGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAV 158
G H LAL+ DG++F+WG G G+LG ++ P + + + CG +S +
Sbjct: 457 GASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMIL 516
Query: 159 TEKGKLYMWGNAKDSQLGVPGL 180
T G++ G+ + ++LG+ L
Sbjct: 517 TSPGRVLACGSNRFNKLGLDHL 538
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 26 GGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG------DRVGG 79
GGLS P ++ L V V+ G +T G+L W A LG G V
Sbjct: 325 GGLSSPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPP---LGAGGGTLLPGAVEL 381
Query: 80 WKPKLLPNLVD----VRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPM 135
+P+ + ++ V I +A G + LTD G + ++G G +G LGH + P
Sbjct: 382 PQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPT 441
Query: 136 VIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
++EAL + +ACG S A++ G+L+ W
Sbjct: 442 IVEALLGYEMVQVACGASHVLALSTDGELFAW 473
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 39 VPVA------AVSCGGFFTMVLTEEGQLWNWGANSNYELG--------------RGDRVG 78
VPVA V CG +M+LT G++ G+N +LG + +
Sbjct: 495 VPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEAL 554
Query: 79 GWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIE 138
+ P L ++ + G HS A+T G +++G HGQLG S + + P ++
Sbjct: 555 SFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQ 614
Query: 139 ALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
L + +ACG + + AV +G++Y WG +LG
Sbjct: 615 GLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLG 652
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
P P ++R Q+ G H+L L G+VFSWG G HGQLGH + + P ++EAL
Sbjct: 149 PFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQ 208
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+ +A GG S V+E G +Y+WG + QL +P
Sbjct: 209 GLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALP 245
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 38/171 (22%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
+ G ++L GQ+++WG + +LG G +P+LL L + + ++A GG+HS
Sbjct: 163 LELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 104 LALTDDGKVFSWGYGGHGQLG--------------------------------------H 125
+ +++ G ++ WG+ GQL
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPA 282
Query: 126 SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
F Q P +++ +CG +A VT G+LY WG K QLG
Sbjct: 283 PFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 333
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 41/164 (25%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG-------------------------RGD 75
+A V+ GG+ ++ ++E G ++ WG N + +L +
Sbjct: 212 MAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVK 271
Query: 76 RVGGWKP---------KLLPNLVDVRI----IQIANGGYHSLALTDDGKVFSWGYGGHGQ 122
R GG + + P L+D+ + ++ + G H+ +T G++++WG+G +GQ
Sbjct: 272 RTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQ 331
Query: 123 LGHSFTQNQKVPMVIEALADE--FVTHIACGG-STSAAVTEKGK 163
LGH T + P +E D+ V + CG +T EKGK
Sbjct: 332 LGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGK 375
Score = 33.1 bits (74), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 37 LPVPVAAV--SCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI 93
LP+ AV SCG T V+T G+L+ WG +LG D +P+ + VD ++
Sbjct: 296 LPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQL 354
>sp|Q54Q89|RCCDC_DICDI RCC1 repeat-containing protein DDB_G0284033 OS=Dictyostelium
discoideum GN=DDB_G0284033 PE=4 SV=2
Length = 487
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 31 PSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN-- 87
P K L + + +S G FT+ L+ +G+L+++G+++ ELG GD +PKL+ N
Sbjct: 233 PYNNKVLSEIGIKKISMGATFTIALSNDGKLYSFGSSTFNELGNGDMFNEREPKLIDNQL 292
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQL--------GHSFTQNQKVPMVIEA 139
L D II + G +H++ALT D K+ +WG Q SFT Q + +
Sbjct: 293 LQDNEIIDLECGFFHTVALTSDNKILTWGRNQESQCFPVPEGTGKGSFTNVQYLDT--SS 350
Query: 140 LAD-EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
L D + + I S +TE G +Y G+ Q G+
Sbjct: 351 LGDHDKIIQIGASNLNSYILTENGNIYSIGSNDHGQCGI 389
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 63 WGANSNYELG--RGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
WGA+++ ++G +RV + P L ++ I +I+ G ++AL++DGK++S+G
Sbjct: 213 WGASNSGQIGSPEYNRVQ-YDPYNNKVLSEIGIKKISMGATFTIALSNDGKLYSFGSSTF 271
Query: 121 GQLGHSFTQNQKVPMVI--EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
+LG+ N++ P +I + L D + + CG + A+T K+ WG ++SQ
Sbjct: 272 NELGNGDMFNEREPKLIDNQLLQDNEIIDLECGFFHTVALTSDNKILTWGRNQESQ 327
Score = 33.9 bits (76), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 14/99 (14%)
Query: 92 RIIQIANGGYHSLAL-------------TDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVI 137
++ Q+ +G YH+ + D + WG GQ+G + + Q P
Sbjct: 177 QLKQLISGTYHNACILNDSNSNNNNNNNKDRSLILLWGASNSGQIGSPEYNRVQYDPYNN 236
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ L++ + I+ G + + A++ GKLY +G++ ++LG
Sbjct: 237 KVLSEIGIKKISMGATFTIALSNDGKLYSFGSSTFNELG 275
Score = 30.4 bits (67), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 17/93 (18%)
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQ-KVPMVIEALADE---------FVTHIA 149
GY S ++ KV+SWG G +G+LGH + + VP IE D+ + I
Sbjct: 59 GYSSSQYSN--KVYSWGSGLNGKLGHGLDETKIVVPKEIEIKEDDDNNRVFNQGKINKIT 116
Query: 150 CGGSTSA-----AVTEKGKLYMWGNAKDSQLGV 177
G + S + ++ Y G+ +D+QL V
Sbjct: 117 SGTTYSIFSGYDQIKDRQVFYGCGDNRDAQLIV 149
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 21/199 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ G ++ +G+LGLG E P K L + V+CG FT++LTE GQ+
Sbjct: 70 LFVCGLNK-DGQLGLGH----TEEVLYFTPCK-SLLGCAIQQVACGWDFTIILTENGQVL 123
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDV---RIIQIANGGYHSLALTDDGKVFSWGYG 118
+ G+NS +LG G + ++P +++ +++ IA G H+LA T G VF WG G
Sbjct: 124 SCGSNSFGQLGVPH---GPRRCVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWGTG 180
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVT--------HIACGGSTSAAVTEKGKLYMWGNA 170
G Q +P+ + A VT + G SA++T+ G+LY+WG+
Sbjct: 181 -LASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSN 239
Query: 171 KDSQLGVPGLPVVQPCPVE 189
K QL ++ P +E
Sbjct: 240 KHGQLASQAAFLLLPQRIE 258
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 30 IPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWG---ANSNYELGRGDRV----GGWKP 82
IP ++ L V +++ G + T G ++ WG A+S L G + +P
Sbjct: 144 IPQAIELLREKVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEP 203
Query: 83 KLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA--L 140
+ L + + + + G HS +LTD G+++ WG HGQL S +P IEA
Sbjct: 204 STVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA-SQAAFLLLPQRIEARCF 262
Query: 141 ADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+E + + G + A T GK++ WG A QLG
Sbjct: 263 QNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLG 298
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ-IANGGYHSLALTDDGKVFSWGYG 118
L+ WGANS +LG G + + L + I+ I GG HS +TD+G +F G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCGLN 76
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLG T+ ++L + +ACG + +TE G++ G+ QLGVP
Sbjct: 77 KDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVP 136
Query: 179 GLP 181
P
Sbjct: 137 HGP 139
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
L+ WG + G+LGLG A LS K + ++ GG + V+T+EG L+
Sbjct: 17 LFAWGANS-YGQLGLGHKEDVLSAQQLSDFCKSGC----IKRITGGGGHSAVVTDEGSLF 71
Query: 62 NWGANSNYELGRG--DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
G N + +LG G + V + P +L+ I Q+A G ++ LT++G+V S G
Sbjct: 72 VCGLNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNS 129
Query: 120 HGQLGHSFTQNQKV-PMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
GQLG + V P IE L ++ V+ IA G + A T G ++ WG
Sbjct: 130 FGQLGVPHGPRRCVIPQAIELLREKVVS-IAAGLRHALAATASGTVFQWGT 179
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 31 PSKVKALPVPVA-AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLV 89
PS V L A V G + LT+ G+L+ WG+N + +L LLP +
Sbjct: 203 PSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAAF-----LLLPQRI 257
Query: 90 DVRIIQ------IANGGYHSLALTDDGKVFSWGYGGHGQLGHS 126
+ R Q + +G H +A T GKVF+WG +GQLG +
Sbjct: 258 EARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRT 300
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 32/181 (17%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV---PVAAVSCGGFFTMVLTEE 57
ELY WG ++ G+L ++A L +P +++A +AAV G + T
Sbjct: 232 ELYVWGSNK-HGQLA-------SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVT 283
Query: 58 GQLWNWGANSNYELGRG-DRVGGWK-----------------PKLLPNLVDVRIIQIANG 99
G+++ WG +LGR + GW+ P LP L +I+ G
Sbjct: 284 GKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGA--TEISCG 341
Query: 100 GYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT 159
H+LA+ G SWG+ HG G + P + L H+ CG S A+
Sbjct: 342 SEHNLAVIG-GVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCGAGHSLALC 400
Query: 160 E 160
+
Sbjct: 401 Q 401
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 101 YHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE-FVTHIACGGSTSAAVT 159
+ S A+ +F+WG +GQLG ++ + + I GG SA VT
Sbjct: 6 HSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVT 65
Query: 160 EKGKLYMWGNAKDSQLGV 177
++G L++ G KD QLG+
Sbjct: 66 DEGSLFVCGLNKDGQLGL 83
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 7/181 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELYTW +G +L G G + P V+ L + VSCG FT+ +T+EGQ
Sbjct: 389 ELYTWVNMQGGTKLHGQLGHG--DKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQ 446
Query: 60 LWNWGANSNYELGRGDRVGG---WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L+ +G++ +G D+V G +P L + + Q++ G H + LT + +V+SWG
Sbjct: 447 LYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWG 505
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +G+LG ++ P ++ + + CG + +T+ GK+ G + ++LG
Sbjct: 506 CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLG 565
Query: 177 V 177
+
Sbjct: 566 L 566
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG E GRLGL + +P KAL + AV CG T +LT+ G++
Sbjct: 500 EVYSWGCGE-YGRLGLDSEEDYYTPQKVDVP---KALII--VAVQCGCDGTFLLTQSGKV 553
Query: 61 WNWGANSNYELGRGDRVGGW-------------KPKLLPNLVDVRIIQIANGGYHSLALT 107
G N +LG + G L L +I IA G H+ A+
Sbjct: 554 LACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAID 613
Query: 108 DDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
+ G++ ++G GQLG ++ + + ++ L + V ++CG + A T+ ++
Sbjct: 614 ERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFA 673
Query: 167 WGNAKDSQLGV 177
WGN + +L +
Sbjct: 674 WGNGGNGRLAM 684
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD-----VRIIQ 95
+ ++ G T + E G+L +G N +LG VG +K +L NL+ ++I+
Sbjct: 599 IRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG----VGNYKKRLGINLLGGPLGGKQVIR 654
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
++ G ++A TDD +F+WG GG+G+L + T+
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTER 689
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 7/181 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
ELYTW +G +L G G + P V+ L + VSCG FT+ +T+EGQ
Sbjct: 389 ELYTWVNMQGGTKLHGQLGHG--DKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQ 446
Query: 60 LWNWGANSNYELGRGDRVGG---WKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWG 116
L+ +G++ +G D+V G +P L + + Q++ G H + LT + +V+SWG
Sbjct: 447 LYAFGSDYYGCMGV-DKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWG 505
Query: 117 YGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
G +G+LG ++ P ++ + + CG + +T+ GK+ G + ++LG
Sbjct: 506 CGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLG 565
Query: 177 V 177
+
Sbjct: 566 L 566
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
E+Y+WG E GRLGL + +P KAL + AV CG T +LT+ G++
Sbjct: 500 EVYSWGCGE-YGRLGLDSEEDYYTPQRVDVP---KALII--VAVQCGCDGTFLLTQSGKV 553
Query: 61 WNWGANSNYELGRGDRVGGW-------------KPKLLPNLVDVRIIQIANGGYHSLALT 107
G N +LG + G L L +I IA G H+ A+
Sbjct: 554 LACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAID 613
Query: 108 DDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
+ G++ ++G GQLG ++ + + ++ L + V ++CG + A T+ ++
Sbjct: 614 ERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFA 673
Query: 167 WGNAKDSQLGV 177
WGN + +L +
Sbjct: 674 WGNGGNGRLAM 684
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD-----VRIIQ 95
+ ++ G T + E G+L +G N +LG VG +K +L NL+ ++I+
Sbjct: 599 IRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG----VGNYKKRLGINLLGGPLGGKQVIR 654
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQN 130
++ G ++A TDD +F+WG GG+G+L + T+
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTER 689
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
P P ++R Q+ G H+L L G+VFSWG G HGQLGH + + P ++EAL
Sbjct: 149 PFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQ 208
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+ +A GG S V+E G +Y+WG + QL +P
Sbjct: 209 GLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALP 245
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 38/171 (22%)
Query: 44 VSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHS 103
+ G ++L GQ+++WG + +LG G +P+LL L + + ++A GG+HS
Sbjct: 163 LELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHS 222
Query: 104 LALTDDGKVFSWGYGGHGQLG--------------------------------------H 125
+ +++ G ++ WG+ GQL
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPA 282
Query: 126 SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
F Q P +++ ++CG +A VT G+LY WG K QLG
Sbjct: 283 PFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLG 333
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 42/175 (24%)
Query: 31 PSKVKALP-VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELG----------------- 72
P ++AL + +A V+ GG+ ++ ++E G ++ WG N + +L
Sbjct: 201 PRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 260
Query: 73 -----------RGDRVGGWKP------KLLPNLVDVRI----IQIANGGYHSLALTDDGK 111
R RV P + P L+D+ + ++++ G H+ +T G+
Sbjct: 261 TGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGE 320
Query: 112 VFSWGYGGHGQLGHSFTQNQKVPMVIEALADE--FVTHIACGG-STSAAVTEKGK 163
+++WG+G +GQLGH T + P +E D+ V + CG +T EKGK
Sbjct: 321 LYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGK 375
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 21/187 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ G ++ +G+LGLG E +I ++ P+ V+CG FT++LTE+GQ+
Sbjct: 69 DLFVCGLNK-DGQLGLG---HTEEVLRFTICKPLRG--CPIRQVACGWDFTIMLTEKGQV 122
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDV---RIIQIANGGYHSLALTDDGKVFSWGY 117
+ G+N+ +LG G + ++P ++ +++ +A G H+LA T G VF WG
Sbjct: 123 LSCGSNAFGQLGVPH---GPRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGT 179
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVTHI--------ACGGSTSAAVTEKGKLYMWGN 169
G G Q +P+ + A VT + G SA++T+ G+LY+WG
Sbjct: 180 -GLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGR 238
Query: 170 AKDSQLG 176
K QL
Sbjct: 239 NKHGQLA 245
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 80/183 (43%), Gaps = 13/183 (7%)
Query: 16 LGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWG---ANSNYELG 72
LG GP + +P ++ L V V+ G + T G ++ WG A+S L
Sbjct: 133 LGVPHGPRKC---VVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLC 189
Query: 73 RGDRV----GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFT 128
G + +P + L + + G HS +LTD G+++ WG HGQL S
Sbjct: 190 PGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLA-SRA 248
Query: 129 QNQKVPMVIEA--LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLPVVQPC 186
+P IEA DE VT + G + A TE GK++ WG A QLG P
Sbjct: 249 VFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQK 308
Query: 187 PVE 189
PVE
Sbjct: 309 PVE 311
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ-IANGGYHSLALTDDGKVFSWGYG 118
L+ WGANS +LG G + + P+ L + I+ + GG HS +TD G +F G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLN 76
Query: 119 GHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
GQLG T+ + + L + +ACG + +TEKG++ G+ QLGVP
Sbjct: 77 KDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVP 136
Query: 179 GLP 181
P
Sbjct: 137 HGP 139
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 11/171 (6%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVP--VAAVSCGGFFTMVLTEEGQ 59
L+ WG + G+LGLG + +P ++ + +V+ GG + V+T+ G
Sbjct: 17 LFAWGANS-YGQLGLG------HKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGD 69
Query: 60 LWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
L+ G N + +LG G + + L I Q+A G ++ LT+ G+V S G
Sbjct: 70 LFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNA 129
Query: 120 HGQLGHSF-TQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGN 169
GQLG + VP IE L ++ V +A G + A T G ++ WG
Sbjct: 130 FGQLGVPHGPRKCVVPQAIECLREKVVC-VAAGLRHALATTATGSVFQWGT 179
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 75/187 (40%), Gaps = 23/187 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGF-FTMVLTEEGQL 60
++ WG L PG+ PS+V L A + G + LT+ G+L
Sbjct: 174 VFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGEL 233
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPN-LVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
+ WG N + +L ++ + D ++ + +G H +A T+ GKVF+WG
Sbjct: 234 YVWGRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRAD 293
Query: 120 HGQLGHSFT--QNQK----------------VPMVIEALADEFVTHIACGGSTSAAVTEK 161
+GQLG + QK VP + L T I+CG + AV +
Sbjct: 294 YGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTG--ATEISCGSEHNLAVI-R 350
Query: 162 GKLYMWG 168
K WG
Sbjct: 351 DKCCSWG 357
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 30/181 (16%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKA---LPVPVAAVSCGGFFTMVLTEE 57
ELY WGR++ G+L + A L +P +++A V AV G + TE
Sbjct: 232 ELYVWGRNK-HGQLA-------SRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTET 283
Query: 58 GQLWNWGANSNYELGRG-DRVGGWKP-------------KLLPNLVDVRI--IQIANGGY 101
G+++ WG +LGR + KP +P+ + +I+ G
Sbjct: 284 GKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSE 343
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEAL--ADEFVTHIACGGSTSAAVT 159
H+LA+ D K SWG+ HG G N P ++AL + + + CG S AV
Sbjct: 344 HNLAVIRD-KCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAVC 402
Query: 160 E 160
+
Sbjct: 403 Q 403
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%)
Query: 82 PKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALA 141
P P ++R+ Q+ G H L L G+VFSWG G HGQLGH + + P ++EAL
Sbjct: 152 PFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQ 211
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+ +A GG S ++E G +Y+WG + QL +P
Sbjct: 212 GLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALP 248
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 37/186 (19%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGG 100
V + G ++L GQ+++WGA + +LG G +P+LL L +R+ ++A GG
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGG 222
Query: 101 YHSLALTDDGKVFSWGYGGHGQLG---HSFTQN--------------------------- 130
+HS+ L++ G ++ WG+ GQL S T+N
Sbjct: 223 WHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAP 282
Query: 131 ------QKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG-VPGLPVV 183
Q P +++ +CG +A VT G+LY WG K QLG +
Sbjct: 283 AHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLD 342
Query: 184 QPCPVE 189
+PC VE
Sbjct: 343 RPCCVE 348
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 46/190 (24%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALP-VPVAAVSCGGFFTMVLTEEGQ 59
++++WG G+LG G E P ++AL + +A V+ GG+ ++ L+E G
Sbjct: 181 QVFSWGAGR-HGQLGHGTLEAELE------PRLLEALQGLRMAKVAAGGWHSVCLSETGD 233
Query: 60 LWNWGANSNYELGRGDRVG----------------GWKPKL----------------LPN 87
++ WG N + +L R G G K +L P
Sbjct: 234 IYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPA 293
Query: 88 LVDVRI----IQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE 143
L+D+ + + + G H+ +T G++++WG+G +GQLGH + + P +E +
Sbjct: 294 LLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVER 353
Query: 144 --FVTHIACG 151
V + CG
Sbjct: 354 QLEVRAVTCG 363
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 71.2 bits (173), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 39 VPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDR--VGGWKPKLLPNLVDVRIIQI 96
+ + +SCG + V+T++G L+ +G + LG G++ + PKL+ +L II +
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDM 397
Query: 97 ANGGYHSLALTDDGKVFSWGYGGHGQLG-HSFTQNQKVPMVIEALADEF--------VTH 147
++GG HSL LT+ G VFS+G GQLG F+ Q +P I+ +
Sbjct: 398 SSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIK 457
Query: 148 IACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
++ GG S A+++ Y WG + LG
Sbjct: 458 VSAGGYHSIAISDNNDTYAWGRSDYGVLG 486
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 27/194 (13%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGL--SIPSKVKALPVP-VAAVSCGGFFTMVLTEEG 58
L+T+GR + GRLGLG E L S P V++L + +S GG ++VLT +G
Sbjct: 359 LFTFGRGD-HGRLGLG------EQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKG 411
Query: 59 QLWNWGANSNYELGRG---------DRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDD 109
++++G N +LG G ++ ++ + II+++ GGYHS+A++D+
Sbjct: 412 LVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDN 471
Query: 110 GKVFSWGYGGHGQLGHSF--TQNQKVPMVIEA---LAD--EFVTHIACGGSTSAAVTEKG 162
++WG +G LG S ++ +P++I + + D +F+ ++ G + A++ G
Sbjct: 472 NDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFID-VSSGFQHNVAMSIDG 530
Query: 163 KLYMWGNAKDSQLG 176
LY WG +LG
Sbjct: 531 SLYSWGCNAGQRLG 544
Score = 61.6 bits (148), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 47/193 (24%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD---------- 90
V +++ GG ++ LT G++++WG N + +LG G+ LP L++
Sbjct: 245 VVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSS-SYYSLPQLINFNISYNNNNN 303
Query: 91 ----------------------------------VRIIQIANGGYHSLALTDDGKVFSWG 116
++I++++ G S +TD G +F++G
Sbjct: 304 NNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFG 363
Query: 117 YGGHGQLG--HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQ 174
G HG+LG Q P ++++L F+ ++ GG S +T KG ++ +G Q
Sbjct: 364 RGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQ 423
Query: 175 LGVPGLPVVQPCP 187
LG+ Q P
Sbjct: 424 LGIGCFSNQQTIP 436
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLL------PNLVDVRII 94
+ +S G + +T++G L+ +G +LG G+ PKL+ P+L R++
Sbjct: 190 IVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSL---RVV 246
Query: 95 QIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
IANGG HSLALT GKV+SWG QLG
Sbjct: 247 SIANGGKHSLALTICGKVYSWGGNDSCQLG 276
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 92 RIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADE---FVTHI 148
+I+ I+ G HS +TD G ++++G G G+LGH ++ P ++E + V I
Sbjct: 189 KIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSI 248
Query: 149 ACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
A GG S A+T GK+Y WG QLG+
Sbjct: 249 ANGGKHSLALTICGKVYSWGGNDSCQLGL 277
Score = 56.6 bits (135), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 15/145 (10%)
Query: 2 LYTWGRDEGEGRLGLGPGRG----PNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEE 57
++++GR++ +G+LG+G P + + + P+ + VS GG+ ++ +++
Sbjct: 413 VFSFGRND-QGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDN 471
Query: 58 GQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD--------VRIIQIANGGYHSLALTDD 109
+ WG + LG V G + LP L++ V+ I +++G H++A++ D
Sbjct: 472 NDTYAWGRSDYGVLGTSIDVQG--DRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSID 529
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVP 134
G ++SWG +LG +NQ P
Sbjct: 530 GSLYSWGCNAGQRLGFKSDENQLTP 554
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 10/151 (6%)
Query: 36 ALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDV--RI 93
++P V GG T+ L++ GQ++++G N LGR V G +++P V++ ++
Sbjct: 64 SIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEG--SEMVPGKVELQEKV 121
Query: 94 IQIANGGYHSLALTDDGKVFSWG--YGGHGQLGHSFTQNQKVPMV-IEALADEFVTHIAC 150
+Q++ G H+ ALTDDG+VF WG +G +G + K MV ++ D V +A
Sbjct: 122 VQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQVQLDVPVVKVAS 179
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLG-VPGL 180
G +T G LY G + QLG VP L
Sbjct: 180 GNDHLVMLTADGDLYTLGCGEQGQLGRVPEL 210
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 17/191 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGG-----LSIPSKVKALP------VPVAAVSCGGF 49
+LYT G E +G+LG P N G L +P V V CG +
Sbjct: 192 DLYTLGCGE-QGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAY 250
Query: 50 FTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI--IQIANGGYHSLALT 107
FT ++ EG ++ +G ++ ++LG + P+ L + + + + G +H++ +
Sbjct: 251 FTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMD 310
Query: 108 DDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYM 166
+GK +S G +G+LG + + +P +I L V+ +ACG S AVT+ G+++
Sbjct: 311 SEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPA--VSSVACGASVGYAVTKDGRVFA 368
Query: 167 WGNAKDSQLGV 177
WG + QLG
Sbjct: 369 WGMGTNYQLGT 379
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 15/112 (13%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWN 62
Y+ GR E GRLGLG G A SIP+ + LP V++V+CG +T++G+++
Sbjct: 316 YSLGRAE-YGRLGLGEG-----AEEKSIPTLISRLPA-VSSVACGASVGYAVTKDGRVFA 368
Query: 63 WGANSNYELGRGDRVGGWKP-----KLLPNLVDVRIIQIANGGYHSLALTDD 109
WG +NY+LG G W P K L N V ++ +++GG H++ L D
Sbjct: 369 WGMGTNYQLGTGQDEDAWSPVEMMGKQLENRV---VLSVSSGGQHTVLLVKD 417
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 29/199 (14%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y++G ++ EG LG R + G +P KV+ L V VS G T LT++G++
Sbjct: 87 QVYSFGCND-EGALG----RDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRV 140
Query: 61 WNWGA--NSNYELGRGDRVGGWKPKLLPNLV--DVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+ ++N +G + + K ++P V DV ++++A+G H + LT DG +++ G
Sbjct: 141 FLWGSFRDNNGVIGLLEPM---KKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLG 197
Query: 117 YGGHGQLGH-----------SFTQNQKVPMVIEALADEFVTHIA-----CGGSTSAAVTE 160
G GQLG + VP + + H+ CG + A++
Sbjct: 198 CGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISH 257
Query: 161 KGKLYMWGNAKDSQLGVPG 179
+G +Y +G + QLG PG
Sbjct: 258 EGHVYGFGLSNYHQLGTPG 276
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 48/206 (23%)
Query: 12 GRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYEL 71
G+LG G G N + L +P++V L V ++CG T+VLT+ G++ G+ S ++
Sbjct: 857 GQLGHG---GRNNSNQL-VPTRVNGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQM 912
Query: 72 GRGD---RVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH-------- 120
G D +V + P LP L +R+ IA YHS+ +T+D +VF WG
Sbjct: 913 GVDDDIKKVFAFTP--LP-LGPLRVRDIATHYYHSICITEDNRVFEWGRNPQELKMRMFV 969
Query: 121 ------GQLGH-------SFTQNQKVPMV-----------------IEALADEFVTHIAC 150
QL + S + N P V ++ D + +AC
Sbjct: 970 MKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVAC 1029
Query: 151 GGSTSAAVTEKGKLYMWGNAKDSQLG 176
G S SA +T +G LY WG D QLG
Sbjct: 1030 GLSHSALITSEGTLYTWGKGLDYQLG 1055
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 14/142 (9%)
Query: 43 AVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVR-----IIQIA 97
A++CG +VL+ GQL WG N + G G + NL V I +IA
Sbjct: 780 AIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFR------IANLHQVDGDWPAIEKIA 833
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGH--SFTQNQKVPMVIEALADEFVTHIACGGSTS 155
G +HS + DG ++++G+G GQLGH NQ VP + L + VT IACG + +
Sbjct: 834 CGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICK-VTQIACGRAHT 892
Query: 156 AAVTEKGKLYMWGNAKDSQLGV 177
+T+ G++ + G+ Q+GV
Sbjct: 893 VVLTDTGRVLVCGSGSYGQMGV 914
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 13 RLGLG-PGRGPNEAGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
R+ L P P E GL +VK L + +V+CG + ++T EG L+ WG +Y+
Sbjct: 997 RVNLNLPAEIPREDLGLR---EVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQ 1053
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
LG G++ +P + + + ++ G H++A TDDG VF+WG GQ G
Sbjct: 1054 LGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD---VRIIQIA 97
+ ++CG F + + +G LW +G +LG G R +L+P V+ ++ QIA
Sbjct: 829 IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNS--NQLVPTRVNGLICKVTQIA 886
Query: 98 NGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAA 157
G H++ LTD G+V G G +GQ+G + L V IA S
Sbjct: 887 CGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSIC 946
Query: 158 VTEKGKLYMWG 168
+TE +++ WG
Sbjct: 947 ITEDNRVFEWG 957
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 40/179 (22%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGAN-------------------SNYEL------- 71
P+ V ++ + ++ +TE+ +++ WG N N E
Sbjct: 931 PLRVRDIATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPS 990
Query: 72 --GRGDRVGGWKPKLLP----------NLVDVRIIQIANGGYHSLALTDDGKVFSWGYGG 119
G RV P +P + +D I+ +A G HS +T +G +++WG G
Sbjct: 991 TNGSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGL 1050
Query: 120 HGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGV 177
QLGH + P V E ++V +++ G + + A T+ G ++ WG Q GV
Sbjct: 1051 DYQLGHGNKNERMEPHQVFEPNGAKWV-NVSLGNNHTIASTDDGSVFAWGKNDFGQCGV 1108
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 29/187 (15%)
Query: 18 PGRGPNEAGGLSIPSKVKALPV------PVAAVSCGGFFTMVLTEEG---QLWNWGANSN 68
P GP GL +++ +P +++ +CG FT++ ++ ++W G N +
Sbjct: 77 PSSGPGPRAGLRPRRRIQPVPYRLELDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKD 136
Query: 69 YELG----RGDRVGGWKPKLLPNLV--------DVRIIQIANGGYHSLALTDDGKVFSWG 116
+LG R D+ G++ L P+ V + +++Q++ G HSL LTD VFS G
Sbjct: 137 SQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMG 196
Query: 117 YGGHGQLGHS------FTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
HGQ G ++++ KV + + D V + CG S +T+KG++Y G
Sbjct: 197 NNSHGQCGRKVVEDEVYSESHKVHRMQD--FDGQVVQVVCGQDHSLFLTDKGEVYSCGWG 254
Query: 171 KDSQLGV 177
D Q G+
Sbjct: 255 ADGQTGL 261
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 28 LSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG---DRVGGWKPKL 84
L P + K L VSCG ++VLT+ +++ G NS+ + GR D V K+
Sbjct: 165 LDRPQETKVL-----QVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKV 219
Query: 85 -LPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEA-LAD 142
D +++Q+ G HSL LTD G+V+S G+G GQ G P + LA
Sbjct: 220 HRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAG 279
Query: 143 EFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
V +A G A++ G ++ WGN++ QL
Sbjct: 280 VTVVQVATYGDCCLALSADGGVFGWGNSEYLQLA 313
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 85/189 (44%), Gaps = 22/189 (11%)
Query: 1 ELYT--WGRDEGEGRLGLGPGRGPNEAGGLSIPSKV--KALPVPVAAVSCGGFFTMVLTE 56
E+Y+ WG D G+ GLG S PSK+ V V V+ G + L+
Sbjct: 247 EVYSCGWGAD---GQTGLG------HYNITSTPSKLGGDLAGVTVVQVATYGDCCLALSA 297
Query: 57 EGQLWNWGANSNYELGR-GDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSW 115
+G ++ WG + +L D P+ LP ++ Q+A GG L +G VF W
Sbjct: 298 DGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVW 357
Query: 116 GYGGHGQLGHSFTQNQKVPMVIEAL--ADEF-----VTHIACGGSTSAAVTEKGKLYMWG 168
GYG G+ G + M+ L EF V+ I CG S AA+T KG+L++WG
Sbjct: 358 GYGILGK-GPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWG 416
Query: 169 NAKDSQLGV 177
LG+
Sbjct: 417 KNIRGCLGI 425
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 23/197 (11%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
+L+ G ++ +G+LGLG E P K P+ V+CG FT++LTE GQ+
Sbjct: 69 DLFVCGLNK-DGQLGLGH----TEDIPYFTPCK-SLFGCPIQQVACGWDFTIMLTENGQV 122
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDV---RIIQIANGGYHSLALTDDGKVFSWGY 117
+ G+NS +LG G + ++P +++ +++ IA G H++A T G VF WG
Sbjct: 123 LSCGSNSFGQLGVPH---GPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGT 179
Query: 118 GGHGQLGHSFTQNQKVPMVIEALADEFVT--------HIACGGSTSAAVTEKGKLYMWGN 169
G G Q +P+ A VT + G SA++T+ G++Y+WG+
Sbjct: 180 -GLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGS 238
Query: 170 AKDSQLGVPG--LPVVQ 184
K QL LPV Q
Sbjct: 239 NKHGQLANEAAFLPVPQ 255
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 76/174 (43%), Gaps = 19/174 (10%)
Query: 21 GPNEAGGLSIPSKVKALPVP---------VAAVSCGGFFTMVLTEEGQLWNWG---ANSN 68
G N G L +P + VP V ++ G + T G ++ WG A+
Sbjct: 126 GSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCG 185
Query: 69 YELGRGDRV----GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG 124
L G + +P + L + + + + G HS +LTD G+V+ WG HGQL
Sbjct: 186 RRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA 245
Query: 125 HSFTQNQKVPMVIEA--LADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ VP IEA +E VT I G + A TE GK++ WG A QLG
Sbjct: 246 NE-AAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 28/179 (15%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPV---PVAAVSCGGFFTMVLTEE 57
E+Y WG ++ G+ NEA L +P K++A V A+ G + TE
Sbjct: 232 EVYVWGSNKH--------GQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTET 283
Query: 58 GQLWNWGANSNYELGRG-DRVGGWK-------------PKLLPNLVDVRI--IQIANGGY 101
G+++ WG +LGR + GWK P +P+ +++ G
Sbjct: 284 GKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSE 343
Query: 102 HSLALTDDGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTE 160
H+LA+ G +SWG+ HG G N P ++AL + CG S A+ +
Sbjct: 344 HNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALCQ 401
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 66 NSNYELGRGDRVGGWKPKLLPNLVDVRIIQ-IANGGYHSLALTDDGKVFSWGYGGHGQLG 124
NS +LG G + P+ L + R ++ I GG HS +TD G +F G GQLG
Sbjct: 23 NSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLG 82
Query: 125 HSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGLP 181
T++ ++L + +ACG + +TE G++ G+ QLGVP P
Sbjct: 83 LGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGP 139
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Query: 38 PVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLP--NLVDVRIIQ 95
P V ++ GG + V+T+ G L+ G N + +LG G P P +L I Q
Sbjct: 48 PRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTED--IPYFTPCKSLFGCPIQQ 105
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLGHSF-TQNQKVPMVIEALADEFVTHIACGGST 154
+A G ++ LT++G+V S G GQLG + VP IE L E V IA G
Sbjct: 106 VACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE-LHKEKVVCIAAGLRH 164
Query: 155 SAAVTEKGKLYMWGN 169
+ A T G ++ WG
Sbjct: 165 AVAATASGIVFQWGT 179
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 55 TEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVD------VRIIQIANGGYHSLALTD 108
T+ ++ WG N+N+ LG G + K P LVD + I Q+ +HS+ L+
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQ----NSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQ 194
Query: 109 DGKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
G+V++ G+G G+LGH Q VP ++E L + +A + +TE G +Y +G
Sbjct: 195 KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 169 NAKDSQLGVPGLPVVQPCPV 188
QLG+ +P C V
Sbjct: 255 LNIFHQLGI--IPPPSSCNV 272
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++YTWG D LG G + + + S+ + + V F ++ L+++GQ+
Sbjct: 143 DVYTWG-DNTNFTLGHGSQNSKHHPELVDLFSRSG---IYIKQVVLCKFHSVFLSQKGQV 198
Query: 61 WNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGH 120
+ G LG GD P+L+ L Q+A H++ LT+DG V+++G
Sbjct: 199 YTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIF 258
Query: 121 GQLG 124
QLG
Sbjct: 259 HQLG 262
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 27 GLSIPSKVKALPVP----VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP 82
G S+ + K VP V GG T+ L++ GQ++++G N LGR V G
Sbjct: 51 GESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEG--S 108
Query: 83 KLLPNLVDV--RIIQIANGGYHSLALTDDGKVFSWG--YGGHGQLGHSFTQNQKVPMV-I 137
+++P V++ +++Q++ G H+ ALT+DG+VF WG +G +G + K MV +
Sbjct: 109 EMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPV 166
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG-VPGL 180
+ D V +A G +T G LY G + QLG VP L
Sbjct: 167 QVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPEL 210
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 46 CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI--IQIANGGYHS 103
CG +FT ++ EG ++ +G ++ ++LG + P+ L + + + + G +H+
Sbjct: 247 CGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHT 306
Query: 104 LALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
+ + +GK +S G +G+LG + + +P +I L V+ +ACG S AV++ G
Sbjct: 307 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSKDG 364
Query: 163 KLYMWGNAKDSQLGV 177
+++ WG + QLG
Sbjct: 365 RVFAWGMGTNYQLGT 379
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 55 TEEGQLWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
TE G + G +LG G+ V KP L+P L DV +Q GG H++ L+ G+V+
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLSQSGQVY 89
Query: 114 SWGYGGHGQLGH--SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
S+G G LG S ++ VP +E E V ++ G S +AA+TE G++++WG+ +
Sbjct: 90 SFGCNDEGALGRDTSVEGSEMVPGKVEL--QEKVVQVSAGDSHTAALTEDGRVFLWGSFR 147
Query: 172 DSQLGVPGL 180
D+ GV GL
Sbjct: 148 DNN-GVIGL 155
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWN 62
Y+ GR E GRLGLG G A SIP+ + LPV V++V+CG ++++G+++
Sbjct: 316 YSLGRAE-YGRLGLGEG-----AEEKSIPTLISRLPV-VSSVACGASVGYAVSKDGRVFA 368
Query: 63 WGANSNYELGRGDRVGGWKP-----KLLPNLVDVRIIQIANGGYHSLALTDD 109
WG +NY+LG G W P K L N V ++ +++GG H++ L D
Sbjct: 369 WGMGTNYQLGTGQDEDAWSPVEMTGKQLENRV---VLTVSSGGQHTVLLVKD 417
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 39/204 (19%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y++G ++ EG LG R + G +P KV+ L V VS G T LTE+G++
Sbjct: 87 QVYSFGCND-EGALG----RDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTEDGRV 140
Query: 61 WNWGA--NSNYELGRGDRVGGWKPKLLPNLV--DVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+ ++N +G + + K ++P V D ++++A+G H + LT+DG +++ G
Sbjct: 141 FLWGSFRDNNGVIGLLEPM---KKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLG 197
Query: 117 YGGHGQLGH--SFTQNQ---------KVPMVI----------EALADEFVTHIACGGSTS 155
G GQLG N+ VP + D F CG +
Sbjct: 198 CGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAF-----CGAYFT 252
Query: 156 AAVTEKGKLYMWGNAKDSQLGVPG 179
A++ +G +Y +G + QLG PG
Sbjct: 253 FAISREGHVYGFGLSNYHQLGTPG 276
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELG---RGDRVGG--WKPKLLPNLVDVRIIQ 95
+ +V G + + + +G+++ WG N + G + G KP L+ L +
Sbjct: 281 IISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKS 340
Query: 96 IANGGYHSLALTDDGKVFSWGYGGHGQLG-------HSFTQNQK-------VPMVIEALA 141
I G +H+LAL +DG+V +WG QLG + +++K P +I L
Sbjct: 341 ITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLT 400
Query: 142 DEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG 176
+ V + CG + AVT GK+Y WG+A++ ++G
Sbjct: 401 N--VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVG 433
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
Query: 41 VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRG----DRVGGWKPKLLPNLVDVRIIQI 96
+ ++ G + LT G+++ WG ++LGR R+ G P+ L II +
Sbjct: 228 ICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQ---PLALKNIISV 284
Query: 97 ANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK-----VPMVIEALADEFVTHIACG 151
G YHS A+ + G+V++WG Q G ++ P +++AL V I G
Sbjct: 285 GAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGG 344
Query: 152 GSTSAAVTEKGKLYMWGNAKDSQLGVP 178
+ A+ E G++ WG QLG+P
Sbjct: 345 EHHTLALLEDGRVLAWGRDDRHQLGIP 371
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 23/159 (14%)
Query: 32 SKVKALPVPVAAVSCGGFFTMVL---TEEGQLWNWGANSNYELGRGDRVGG--WKPKLLP 86
+KV +LP PV + TE ++ +G+ S ELG G+ ++P+L P
Sbjct: 42 AKVSSLPKPVRVPGSAKRINKIPELPTERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNP 101
Query: 87 NLV--DVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQNQK------------ 132
L V ++ +A GG HS AL+ DG+V++WG LG T++QK
Sbjct: 102 ILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGR-LTKDQKDENGDKVDNDLL 160
Query: 133 --VPMVIE-ALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
P +E AL+ VT + C + +AA+T+ G + WG
Sbjct: 161 EGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWG 199
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 86/194 (44%), Gaps = 27/194 (13%)
Query: 2 LYTWG--RDEGEGRLGLGPGRGPNEAGGLSI--------PSKVK-ALP-VPVAAVSCGGF 49
+YTWG D GRL + + G + PSKV+ AL + V V C
Sbjct: 129 VYTWGVNDDYALGRLT----KDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDN 184
Query: 50 FTMVLTEEGQLWNWGA--NSNYELGRGD---RVGGWKPKLLPNLVDVRIIQIANGGYHSL 104
T +T+ G + WG S+ LG D R LP I Q+A G H +
Sbjct: 185 LTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLP-----EICQLATGTDHII 239
Query: 105 ALTDDGKVFSWGYGGHGQLGHSFTQNQKVP-MVIEALADEFVTHIACGGSTSAAVTEKGK 163
ALT GKV++WG G QLG + +++ + + LA + + + G S A+ KG+
Sbjct: 240 ALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGR 299
Query: 164 LYMWGNAKDSQLGV 177
+Y WG Q G+
Sbjct: 300 VYAWGLNITRQCGI 313
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 2 LYTWGRDEGEGRLGLGPGRGP-----NEAGG---LSIPSKVKALPVPVAAVSCGGFFTMV 53
+ WGRD+ +LG+ P +E G LS P+ + L V V CG +
Sbjct: 357 VLAWGRDD-RHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGL-TNVIQVVCGTHHNLA 414
Query: 54 LTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQ 95
+T +G++++WG+ NYE+G+GD + +P LV + I+
Sbjct: 415 VTSDGKVYSWGSAENYEVGQGD---NDEDVAVPTLVRSKAIK 453
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 14/164 (8%)
Query: 27 GLSIPSKVKALPVP----VAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKP 82
G S+ + K VP V GG T+ L + GQ++++G N LGR V G
Sbjct: 51 GESVLERKKPALVPLLQDVVQAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEG--S 108
Query: 83 KLLPNLVDV--RIIQIANGGYHSLALTDDGKVFSWG--YGGHGQLGHSFTQNQKVPMV-I 137
+++P V++ +++Q++ G H+ ALT+DG+VF WG +G +G + K MV +
Sbjct: 109 EMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPV 166
Query: 138 EALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLG-VPGL 180
+ D V +A G +T G LY G + QLG VP L
Sbjct: 167 QVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPEL 210
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 46 CGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI--IQIANGGYHS 103
CG + T ++ EG ++ +G ++ ++LG + P+ L + + + + G +H+
Sbjct: 247 CGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHT 306
Query: 104 LALTDDGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKG 162
+ + +GK +S G +G+LG + + +P +I L V+ +ACG S AV++ G
Sbjct: 307 ICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSKDG 364
Query: 163 KLYMWGNAKDSQLGV 177
+++ WG + QLG
Sbjct: 365 RVFAWGMGTNYQLGT 379
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 8/129 (6%)
Query: 55 TEEGQLWNWGANSNYELGRGDRV-GGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVF 113
TE G + G +LG G+ V KP L+P L DV +Q GG H++ L G+V+
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLNQSGQVY 89
Query: 114 SWGYGGHGQLGH--SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAK 171
S+G G LG S ++ VP +E E V ++ G S +AA+TE G++++WG+ +
Sbjct: 90 SFGCNDEGALGRDTSVEGSEMVPGKVEL--QEKVVQVSAGDSHTAALTEDGRVFLWGSFR 147
Query: 172 DSQLGVPGL 180
D+ GV GL
Sbjct: 148 DNN-GVIGL 155
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWN 62
Y+ GR E GRLGLG G A SIP+ + LPV V++V+CG ++++G+++
Sbjct: 316 YSLGRAE-YGRLGLGEG-----AEEKSIPTLISRLPV-VSSVACGASVGYAVSKDGRVFA 368
Query: 63 WGANSNYELGRGDRVGGWKP-----KLLPNLVDVRIIQIANGGYHSLALTDD 109
WG +NY+LG G W P K L N V ++ +++GG H++ L D
Sbjct: 369 WGMGTNYQLGTGQDEDAWSPVEMTGKQLENRV---VLTVSSGGQHTVLLVKD 417
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 39/204 (19%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQL 60
++Y++G ++ EG LG R + G +P KV+ L V VS G T LTE+G++
Sbjct: 87 QVYSFGCND-EGALG----RDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTEDGRV 140
Query: 61 WNWGA--NSNYELGRGDRVGGWKPKLLPNLV--DVRIIQIANGGYHSLALTDDGKVFSWG 116
+ WG+ ++N +G + + K ++P V D+ ++++A+G H + LT DG +++ G
Sbjct: 141 FLWGSFRDNNGVIGLLEPM---KKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLG 197
Query: 117 YGGHGQLGH--SFTQNQKVPMVIEAL-------------------ADEFVTHIACGGSTS 155
G GQLG N+ +E L D F CG +
Sbjct: 198 CGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAF-----CGAYLT 252
Query: 156 AAVTEKGKLYMWGNAKDSQLGVPG 179
A++ +G +Y +G + QLG PG
Sbjct: 253 FAISREGHVYGFGLSNYHQLGTPG 276
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 16/190 (8%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEAGG-----LSIPSKVKALP-----VPVAAVSCGGFF 50
+LYT G E +G+LG P R N G L +P + V V CG +F
Sbjct: 198 DLYTSGCGE-QGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYF 256
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPNLVDVRI--IQIANGGYHSLALTD 108
T +++EG ++ +G ++ ++LG + + P+ L + + I + G +H++ +
Sbjct: 257 TFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDS 316
Query: 109 DGKVFSWGYGGHGQLGH-SFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMW 167
+GK +S G +G+LG + Q P I L + +A G S S AV+ G ++ W
Sbjct: 317 EGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLPK--INSVASGASVSYAVSTDGCVFAW 374
Query: 168 GNAKDSQLGV 177
G + QLG
Sbjct: 375 GMGTNLQLGT 384
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 28/195 (14%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+YT+G ++ EG LG R +E G P KV+ L V VS G T LTE+G+++
Sbjct: 94 IYTFGCND-EGALG----RDTSEEGSEMQPGKVE-LAEKVVQVSAGDSHTAALTEDGRVF 147
Query: 62 NWGA--NSNYELGRGDRVGGWKPKLLPNLVDVR--IIQIANGGYHSLALTDDGKVFSWGY 117
+G+ ++N +G + + K ++P V + +I+IA+G H + LT DG +++ G
Sbjct: 148 VFGSFRDNNGVIGLLEPM---KKSMVPVQVQINTPVIKIASGNDHLVLLTVDGDLYTSGC 204
Query: 118 GGHGQLGH---SFT--------QNQKVPMVIEALAD----EFVTHIACGGSTSAAVTEKG 162
G GQLG FT + VP I A + CG + AV+++G
Sbjct: 205 GEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEG 264
Query: 163 KLYMWGNAKDSQLGV 177
+Y +G + QLG
Sbjct: 265 HVYGFGLSNYHQLGT 279
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 14/172 (8%)
Query: 11 EGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYE 70
+G+ L E+ G S K KALP+ V S G T GQ+ G +
Sbjct: 2 KGKKTLKRTIAAEESNGTSDVKKTKALPI-VTHPSHG-------TVGGQVLTLGQGDVGQ 53
Query: 71 LGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSFTQ- 129
LG G+ + K L L + I+Q A GG H++ L G ++++G G LG ++
Sbjct: 54 LGLGEDIMERKKPALVTLTE-DIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEE 112
Query: 130 -NQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNAKDSQLGVPGL 180
++ P +E LA++ V ++ G S +AA+TE G+++++G+ +D+ GV GL
Sbjct: 113 GSEMQPGKVE-LAEKVV-QVSAGDSHTAALTEDGRVFVFGSFRDNN-GVIGL 161
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 3 YTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWN 62
Y+ GR E GRLGLG A S P+ + LP + +V+ G + ++ +G ++
Sbjct: 321 YSLGRAE-YGRLGLG-----ENAEEQSEPTPIPDLP-KINSVASGASVSYAVSTDGCVFA 373
Query: 63 WGANSNYELGRGDRVGGWKPKLL--PNLVDVRIIQIANGGYHSLAL 106
WG +N +LG G+ W P+ + +L D ++ +++GG H++ L
Sbjct: 374 WGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLSVSSGGQHTVLL 419
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 45 SCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHS 103
S G T+ + EG+ ++ G LG G+ +P +P+L +I +A+G S
Sbjct: 305 SGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLP--KINSVASGASVS 362
Query: 104 LALTDDGKVFSWGYGGHGQLGHSFTQNQKVP--MVIEALADEFVTHIACGGSTSAAVTEK 161
A++ DG VF+WG G + QLG ++ P M + L D V ++ GG + + K
Sbjct: 363 YAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLSVSSGGQHTVLLVRK 422
>sp|Q54VW7|GACGG_DICDI Rho GTPase-activating protein gacGG OS=Dictyostelium discoideum
GN=gacGG PE=3 SV=1
Length = 1203
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 12/100 (12%)
Query: 74 GDRVGGWKPK---LLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLG--HSFT 128
GD+ G KP L+PN I + NG HSLALT+ G+++ WG H QL + T
Sbjct: 20 GDKFSG-KPTFNPLIPN-----ICFMDNGYNHSLALTETGELYGWGDNRHHQLSSNKAIT 73
Query: 129 QNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWG 168
K P+ I+ + ++ V I+CGG+ SAA+ E G LY+WG
Sbjct: 74 SIDK-PIKIQVIPNQRVKSISCGGNFSAAIMENGLLYVWG 112
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 29/185 (15%)
Query: 1 ELYTWGRDEGEGRLGLGPGRGPNEA-GGLSIPSKVKALPVP-VAAVSCGGFFTMVLTEEG 58
ELY WG D +L N+A + P K++ +P V ++SCGG F+ + E G
Sbjct: 54 ELYGWG-DNRHHQLS------SNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIMENG 106
Query: 59 QLWNWGANSNYELGRGDRVGGWKPKLLPNLVD-VRIIQIANGGYHSLALTDDG------- 110
L+ WG + G K P VD ++ + + G + A+ D
Sbjct: 107 LLYVWGT----------LIEGGKCTESPTKVDLLKGVTCVSIGINHCAVVADSPTTPEKR 156
Query: 111 KVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVTEKGKLYMWGNA 170
V++WG GQLG P + L + ++ + CG +AA+ E ++++WG
Sbjct: 157 SVYTWGTNRKGQLGVVGDSITNAPRRV-TLGSKAIS-VCCGEEFTAAIVEGNEVFVWGYN 214
Query: 171 KDSQL 175
K Q+
Sbjct: 215 KSRQI 219
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 51 TMVLTEEGQLWNWGANSNYELGRGDRVGGW-KPKLLPNLVDVRIIQIANGGYHSLALTDD 109
++ LTE G+L+ WG N +++L + KP + + + R+ I+ GG S A+ ++
Sbjct: 46 SLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIMEN 105
Query: 110 GKVFSWGYGGHGQLGHSFTQNQKVPMVIEALADEFVTHIACGGSTSAAVT------EKGK 163
G ++ WG G G KV ++ + VT ++ G + A V EK
Sbjct: 106 GLLYVWGTLIEG--GKCTESPTKVDLL------KGVTCVSIGINHCAVVADSPTTPEKRS 157
Query: 164 LYMWGNAKDSQLGVPG 179
+Y WG + QLGV G
Sbjct: 158 VYTWGTNRKGQLGVVG 173
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 30/180 (16%)
Query: 2 LYTWGRDEGEGRLGLGPGRGPNEAGGLSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLW 61
+YTWG + +G+LG+ N +++ SK +V CG FT + E +++
Sbjct: 158 VYTWGTNR-KGQLGVVGDSITNAPRRVTLGSKA-------ISVCCGEEFTAAIVEGNEVF 209
Query: 62 NWGANSNYELGRGDRVGGWKPKLLPNLVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHG 121
WG N + ++ + + P + I++++ + A + G V WG
Sbjct: 210 VWGYNKSRQICSNNSDEIISIPVKP-FLGRDIVELSCTKNYIAARSGVGNVCVWG----- 263
Query: 122 QLGHSFTQNQKVPMVIEALADEFVT------HIACGGSTSAAVTEKGKLYMWGNAKDSQL 175
N++V + + D+F+ I+ S ++EKG+++ WGN++D+QL
Sbjct: 264 -------SNEQVCRIGD---DKFINFPNKIKQISASTSHILVLSEKGEIFSWGNSEDNQL 313
Score = 39.7 bits (91), Expect = 0.011, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 10/100 (10%)
Query: 28 LSIPSKVKALPVPVAAVSCGGFFTMVLTEEGQLWNWGANSNYELGRGDRVGGWKPKLLPN 87
+SIP K L + +SC + + G + WG+N R+G K PN
Sbjct: 228 ISIPVK-PFLGRDIVELSCTKNYIAARSGVGNVCVWGSNEQV-----CRIGDDKFINFPN 281
Query: 88 LVDVRIIQIANGGYHSLALTDDGKVFSWGYGGHGQLGHSF 127
+I QI+ H L L++ G++FSWG QL H
Sbjct: 282 ----KIKQISASTSHILVLSEKGEIFSWGNSEDNQLSHKL 317
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.139 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,158,649
Number of Sequences: 539616
Number of extensions: 3736966
Number of successful extensions: 8564
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 7640
Number of HSP's gapped (non-prelim): 428
length of query: 189
length of database: 191,569,459
effective HSP length: 111
effective length of query: 78
effective length of database: 131,672,083
effective search space: 10270422474
effective search space used: 10270422474
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 58 (26.9 bits)