BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045745
(351 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 133/246 (54%), Gaps = 18/246 (7%)
Query: 12 FWCYRCLRIVSSLSQFDGDTTCPHCHGGFIEQIE----TEVITTTQTQSSSHDHISRPFS 67
F+CY+C + V+ D CP C+ GF+E+ E + + S S ++ PFS
Sbjct: 21 FFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFS 80
Query: 68 T--AVMLGQDSGQRTTLSFQ------RRSRRRGNSRSQQLDFFNPVIVLRGNNNEENSSG 119
T ++ G + + + F + + R ++ Q D F+P L+ + SSG
Sbjct: 81 TLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLRSSG 140
Query: 120 SSFDLYYEDGQGSESTLRPIPERVLGFLMDSGFHLLLHQLSQIDLTALSRPENLPASKAS 179
+ F+ E+ S+ R +P + G L+ QL++ D P PASK++
Sbjct: 141 THFEFVIEN-HPSDPGNR-MPGNFGDYFFGPGLEQLIQQLAENDPNRYGTP---PASKSA 195
Query: 180 IESMPSIEISSGHVSSECH-CAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPV 238
I+++P+++++ + SE + CAVC + FE G++ ++MPCKH++H+DC+LPWL++ NSCPV
Sbjct: 196 IDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPV 255
Query: 239 CRQELP 244
CR ELP
Sbjct: 256 CRFELP 261
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 138 bits (348), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 137/258 (53%), Gaps = 24/258 (9%)
Query: 7 TTTESFWCYRCLRIVS-SLSQFDGDTTCPHCHGGFIEQIETE-------VITTTQTQSSS 58
T + F+CY+C R V+ ++S D TCP C+ GF+E+ + +
Sbjct: 18 VTNKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPF 77
Query: 59 HD---HISRPFSTAVML-----GQDSGQRTTLSFQRRSRRRGNSRSQQLD--FFNPVIVL 108
HD +S PF++ + L + + G +RS + D F+P +
Sbjct: 78 HDLFLTLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFI 137
Query: 109 RGNNNEENSSGSSFDLYYEDGQGSESTLRPIPERVLGFLMDSGFHLLLHQLSQIDLTALS 168
+ + N+ SSG+ + ++ S+ R +P + + + G L+ QL++ D
Sbjct: 138 QNHLNDLRSSGAQIEFVIQNNP-SDQGFR-LPANIGDYFIGPGLEQLIQQLAENDPNRYG 195
Query: 169 RPENLPASKASIESMPSIEISSGHVSSECH-CAVCKEAFELGNEAREMPCKHIYHEDCIL 227
P PASK++IE++P + I+ +++SE + CAVC + FE G EA++MPCKH+YH+DC+L
Sbjct: 196 TP---PASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLL 252
Query: 228 PWLKMRNSCPVCRQELPA 245
PWL++ NSCPVCR ELP
Sbjct: 253 PWLELHNSCPVCRHELPT 270
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 49/70 (70%)
Query: 174 PASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMR 233
PA I+++P+I+I+ HV S C VCKE + +G R++PC H++H DCI+PWL+
Sbjct: 202 PADTEKIQALPTIQITEEHVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQH 261
Query: 234 NSCPVCRQEL 243
++CPVCR+ L
Sbjct: 262 DTCPVCRKSL 271
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 49/70 (70%)
Query: 174 PASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMR 233
PA K I+++P++ ++ HV S C VCKE + LG R++PC H++H+ CI+PWL+
Sbjct: 206 PADKEKIQALPTVPVTEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQH 265
Query: 234 NSCPVCRQEL 243
+SCPVCR+ L
Sbjct: 266 DSCPVCRKSL 275
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 122/292 (41%), Gaps = 70/292 (23%)
Query: 12 FWCYRCL-RIVSSLSQFDGDTTCPHCHGGFIEQIETEVI------TTTQTQSSSH----- 59
F+C+ C + L ++ CP C GFIE++ + + T +++H
Sbjct: 20 FFCHFCKGEVNPKLPEY----ICPRCDSGFIEEVTDDSSFLGGGGSRTDNSTATHFAELW 75
Query: 60 DHIS--------RPFSTAVMLGQDS-----GQRTTLSF-----------QRRSRRRGNSR 95
DH+ RPF ++ L QD+ G +T F RR R RG++R
Sbjct: 76 DHLDHTMFLQDFRPFLSSNPLDQDNRANERGHQTHTDFWGPSRPPRLPMTRRYRSRGSTR 135
Query: 96 SQQLDFFNPVI--VLRGNNNEENSSGSSFDLYYE--------DGQGSESTLRPIPERVLG 145
+ +I + G GS + D ++ L I ++LG
Sbjct: 136 PDRSPAIEGIIQQIFAGFFANSAIPGSPHPFSWSGMLHSNPGDYAWGQTGLDAIVTQLLG 195
Query: 146 FLMDSGFHLLLHQLSQIDLTALSRPENLPASKASIESMPSIEISSGHVSSECHCAVCKEA 205
L ++G PA K I S+P++ ++ V++ C VCKE
Sbjct: 196 QLENTG--------------------PPPADKEKITSLPTVTVTQEQVNTGLECPVCKED 235
Query: 206 FELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELPAAAAAAAEESSMA 257
+ + + R++PC H +H CI+PWL++ ++CPVCR+ L + +SS A
Sbjct: 236 YTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQTQSSEA 287
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 49/70 (70%)
Query: 174 PASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMR 233
PA I+++P+I+I+ HV S C VCKE + +G R++PC H++H DCI+PWL+
Sbjct: 203 PADNEKIQALPTIQITEEHVGSGLECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQH 262
Query: 234 NSCPVCRQEL 243
++CPVCR+ L
Sbjct: 263 DTCPVCRKSL 272
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 49/70 (70%)
Query: 174 PASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMR 233
PA K I+++P++ ++ HV S C VCK+ + LG R++PC H++H+ CI+PWL+
Sbjct: 204 PADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQH 263
Query: 234 NSCPVCRQEL 243
+SCPVCR+ L
Sbjct: 264 DSCPVCRKSL 273
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 174 PASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMR 233
PA I+++P+I+I+ HV C VCKE + +G R++PC H++H DCI+PWL+
Sbjct: 203 PADTDKIQALPTIQITEEHVGFGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQH 262
Query: 234 NSCPVCRQEL 243
++CPVCR+ L
Sbjct: 263 DTCPVCRKSL 272
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 49/70 (70%)
Query: 174 PASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMR 233
PA K I+++P++ ++ HV S C VCK+ + LG R++PC H++H+ CI+PWL+
Sbjct: 207 PADKEKIQALPTVPVTEEHVGSGLECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQH 266
Query: 234 NSCPVCRQEL 243
+SCPVCR+ L
Sbjct: 267 DSCPVCRKSL 276
>sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8
PE=1 SV=1
Length = 334
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 150 SGFHLLLHQLSQIDLTALSRPENLP-ASKASIESMPSIEISSGHVSSECHCAVCKEAFEL 208
+G+ LL L++ D P A+K++IE++ + E+SS CAVCK+ +
Sbjct: 207 AGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVM 266
Query: 209 GNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELPAAAAAAAEE 253
G +++PC H YH DCI+PWL RNSCPVCR +L A EE
Sbjct: 267 GETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEE 311
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
Query: 1 MSSLPTTT---TESFWCYRCLR--IVSSLSQFDGDTTCPHCHGGFIEQIE 45
MS P+++ T S WCY C + +V +L F C C+ GF+E I+
Sbjct: 1 MSDAPSSSPDATASHWCYHCNKRVVVETLDDF---VVCCECNKGFVESIQ 47
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 46/79 (58%)
Query: 174 PASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMR 233
PA+KA ++S+P + IS C VC FE REMPCKH++H CILPWL
Sbjct: 54 PAAKAVVQSLPVVIISPEQADKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKT 113
Query: 234 NSCPVCRQELPAAAAAAAE 252
NSCP+CR ELP A E
Sbjct: 114 NSCPLCRLELPTDNADYEE 132
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%)
Query: 159 LSQIDLTALSRPENLPASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCK 218
L +D T + PASK +ES+P + ++ + C VC FE G R++PC+
Sbjct: 39 LGAVDFTEWDQRLPPPASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCE 98
Query: 219 HIYHEDCILPWLKMRNSCPVCRQELP 244
H++H CILPWL NSCP+CR ELP
Sbjct: 99 HLFHSACILPWLGKTNSCPLCRHELP 124
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 159 LSQIDLTALSRPENLPASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCK 218
L +D T + PA+K +ES+P + ++ + C VC FE G R++PC+
Sbjct: 39 LGALDFTEWDQRLPPPAAKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCE 98
Query: 219 HIYHEDCILPWLKMRNSCPVCRQELP 244
H++H CILPWL NSCP+CR ELP
Sbjct: 99 HLFHSSCILPWLGKTNSCPLCRHELP 124
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 174 PASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMR 233
PA K I S+P++ ++ V C VCKE + + E R++PC H +H CI+PWL++
Sbjct: 203 PADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELH 262
Query: 234 NSCPVCRQELPAAAAAAAEESSMA 257
++CPVCR+ L + +S+ A
Sbjct: 263 DTCPVCRKSLNGEDSTRQSQSTEA 286
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 170 PENLPASKASIESMPSIEISSGHVS---SECHCAVCKEAFELGNEAREMPCKHIYHEDCI 226
P PASK +E +P I + + +E C +CKE +G++ +E+PCKH +H C+
Sbjct: 198 PRAPPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCL 257
Query: 227 LPWLKMRNSCPVCRQELP 244
PWL NSCP+CR ELP
Sbjct: 258 KPWLDEHNSCPICRHELP 275
>sp|O43164|PJA2_HUMAN E3 ubiquitin-protein ligase Praja-2 OS=Homo sapiens GN=PJA2 PE=1
SV=4
Length = 708
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 25/171 (14%)
Query: 100 DFFNPVIVLRGNNNEENSSGSSFDLY--------YEDGQGSESTLRPIPERVLGFLMDSG 151
+F P +L GNNN E+ S S DL + DG G + + + L ++
Sbjct: 522 EFAQPAFMLDGNNNLEDDSSVSEDLDVDWSLFDGFADGLGVAEAISYVDPQFLTYMA--- 578
Query: 152 FHLLLHQLSQIDLTALSRPENL---------PASKASIESMPSIEISSGH--VSSECHCA 200
L +L+Q TAL+ E+L PASK SI+ +P + H + E C
Sbjct: 579 ---LEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAIGQEQCCP 635
Query: 201 VCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELPAAAAAAA 251
+C + + A E+PC H +H+ C+ WL+ +CPVCR+ P A A+
Sbjct: 636 ICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFPPAVIEAS 686
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 174 PASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMR 233
PA+KA +ES+P ISS ++ C VC FE EMPC H++H +CILPWL
Sbjct: 65 PAAKAVVESLPRTVISSA--KADLKCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKT 122
Query: 234 NSCPVCRQELP 244
NSCP+CR ELP
Sbjct: 123 NSCPLCRHELP 133
>sp|Q5R4R1|PJA2_PONAB E3 ubiquitin-protein ligase Praja-2 OS=Pongo abelii GN=PJA2 PE=2
SV=1
Length = 708
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 25/171 (14%)
Query: 100 DFFNPVIVLRGNNNEENSSGSSFDLY--------YEDGQGSESTLRPIPERVLGFLMDSG 151
+F P +L GNNN E+ S S DL + DG G + + + L ++
Sbjct: 522 EFAQPAFMLDGNNNLEDDSSVSEDLDVDWSLFDGFADGLGVAEAISYVDPQFLTYMA--- 578
Query: 152 FHLLLHQLSQIDLTALSRPENL---------PASKASIESMPSIEISSGH--VSSECHCA 200
L +L+Q TAL+ E+L PASK SI+ +P + H + E C
Sbjct: 579 ---LEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAIGQEQCCP 635
Query: 201 VCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELPAAAAAAA 251
+C + + A E+PC H +H+ C+ WL+ +CPVCR+ P A A+
Sbjct: 636 ICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFPPAVIEAS 686
>sp|Q8NG27|PJA1_HUMAN E3 ubiquitin-protein ligase Praja-1 OS=Homo sapiens GN=PJA1 PE=1
SV=2
Length = 643
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 25/159 (15%)
Query: 105 VIVLRGNNNEENSSGSSFDLY--------YEDGQGSESTLRPIPERVLGFLMDSGFHLLL 156
V +L GNNN E+ S S DL + DG G + + + L ++ L
Sbjct: 488 VFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFLTYMA------LE 541
Query: 157 HQLSQIDLTALSRPENL---------PASKASIESMPSIEISSGH--VSSECHCAVCKEA 205
+L+Q TAL+ E+L PASK SI+++P I ++ H V E C +C
Sbjct: 542 ERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSE 601
Query: 206 FELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELP 244
+ G A E+PC H +H+ C+ WL+ +CPVCR P
Sbjct: 602 YVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 640
>sp|O55176|PJA1_MOUSE E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus GN=Pja1 PE=1
SV=3
Length = 578
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 25/159 (15%)
Query: 105 VIVLRGNNNEENSSGSSFDLY--------YEDGQGSESTLRPIPERVLGFLMDSGFHLLL 156
+ +L GNNN E+ S S DL + DG G + + + L ++ L
Sbjct: 423 MFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFLTYMA------LE 476
Query: 157 HQLSQIDLTALSRPENL---------PASKASIESMPSIEISSGH--VSSECHCAVCKEA 205
+L+Q TAL+ E+L PASK SI+++P I ++ H V E C +C
Sbjct: 477 ERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSE 536
Query: 206 FELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELP 244
+ G A E+PC H +H+ C+ WL+ +CPVCR P
Sbjct: 537 YVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 575
>sp|Q9VE61|RN181_DROME E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila
melanogaster GN=CG7694 PE=2 SV=1
Length = 147
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 44/69 (63%)
Query: 175 ASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRN 234
ASK +I +P EI + C+VCKE E G + R +PCKH +HE+CIL WLK N
Sbjct: 46 ASKRAILELPVHEIVKSDEGGDLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTN 105
Query: 235 SCPVCRQEL 243
SCP+CR EL
Sbjct: 106 SCPLCRYEL 114
>sp|Q63364|PJA2_RAT E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2
PE=2 SV=1
Length = 707
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 30/184 (16%)
Query: 100 DFFNP-VIVLRGNNNEENSSGSSFDLY--------YEDGQGSESTLRPIPERVLGFLMDS 150
+F P +L GNNN E+ S S DL + DG G + + + L ++
Sbjct: 520 EFAQPEAFMLDGNNNLEDDSSVSEDLDVDWSLFDGFADGLGVAEAISYVDPQFLTYMA-- 577
Query: 151 GFHLLLHQLSQIDLTALSRPENL---------PASKASIESMPSIEISSGH--VSSECHC 199
L +L+Q TAL+ E+L PASK SI+ +P + H + E C
Sbjct: 578 ----LEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAIGQEQCC 633
Query: 200 AVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELPA----AAAAAAEESS 255
+C + + A E+PC H +H+ C+ WL+ +CPVCR+ P A+AAA+ E
Sbjct: 634 PICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFPPAVIDASAAASSEPD 693
Query: 256 MALS 259
+ S
Sbjct: 694 LDAS 697
>sp|Q80U04|PJA2_MOUSE E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1
SV=2
Length = 707
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 29/175 (16%)
Query: 100 DFFNP-VIVLRGNNNEENSSGSSFDLY--------YEDGQGSESTLRPIPERVLGFLMDS 150
+F P +L GNNN E+ S S DL + DG G + + + L ++
Sbjct: 520 EFAQPEAFMLDGNNNLEDDSSVSEDLDVDWSLFDGFADGLGVAEAISYVDPQFLTYMA-- 577
Query: 151 GFHLLLHQLSQIDLTALSRPENL---------PASKASIESMPSIEISSGH--VSSECHC 199
L +L+Q TAL+ E+L PASK SI+ +P + H + E C
Sbjct: 578 ----LEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAIGQEQCC 633
Query: 200 AVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELPAA---AAAAA 251
+C + + A E+PC H +H+ C+ WL+ +CPVCR+ P A A+AAA
Sbjct: 634 PICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFPPAVIDASAAA 688
>sp|Q6AXU4|RN181_RAT E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181
PE=1 SV=1
Length = 165
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 174 PASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMR 233
PA+KA +ES+P I S +E C VC FE EMPC H++H +CILPWL
Sbjct: 65 PAAKAVVESLPRTVIRSS--KAELKCPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKT 122
Query: 234 NSCPVCRQELP 244
NSCP+CR ELP
Sbjct: 123 NSCPLCRHELP 133
>sp|Q3T0W3|RN181_BOVIN E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2
SV=1
Length = 153
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 174 PASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMR 233
PA+K ++E++P I +E C VC FE A EMPC H++H +CILPWL
Sbjct: 53 PAAKTAVENLPRTVIRGS--QAELKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKT 110
Query: 234 NSCPVCRQELP 244
NSCP+CR ELP
Sbjct: 111 NSCPLCRHELP 121
>sp|Q9P0P0|RN181_HUMAN E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1
SV=1
Length = 153
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 174 PASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMR 233
PA+K +E++P I +E C VC FE A EMPC H++H CILPWL
Sbjct: 53 PAAKTVVENLPRTVIRGS--QAELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKT 110
Query: 234 NSCPVCRQELPA 245
NSCP+CR ELP
Sbjct: 111 NSCPLCRYELPT 122
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 174 PASKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMR 233
PA + I M + + E C +C E F++ ++ ++PCKH +HE+CI PWL++
Sbjct: 371 PAPEDVIAKMKVQKPPKELIDEEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVN 430
Query: 234 NSCPVCR 240
+C +CR
Sbjct: 431 GTCAICR 437
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 180 IESMPSIEI--SSGHVSSECHCAVCKEAFELGNEAREMP-CKHIYHEDCILPWLKMRNSC 236
I S+P+ + + G +S CAVC + ++ARE+P CKHI+H DC+ WL ++C
Sbjct: 87 IASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTC 146
Query: 237 PVCRQEL 243
PVCR E+
Sbjct: 147 PVCRTEV 153
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 175 ASKASIESMPSIEISSGHVSSEC---HCAVCKEAFELGNEAREMPCKHIYHEDCILPWLK 231
A+K +I + + + G ++ HCAVC E+++ + R +PCKH++H+ C+ PWL
Sbjct: 237 AAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLS 296
Query: 232 MRNSCPVCRQELPAA 246
+CP+C+ + A
Sbjct: 297 EHCTCPMCKLNILKA 311
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 175 ASKASIESMPSIEISSGHVSSEC---HCAVCKEAFELGNEAREMPCKHIYHEDCILPWLK 231
A+K +I + + + G ++ HCAVC E+++ + R +PCKH++H+ C+ PWL
Sbjct: 237 AAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLS 296
Query: 232 MRNSCPVCRQELPAA 246
+CP+C+ + A
Sbjct: 297 EHCTCPMCKLNILKA 311
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 175 ASKASIESMPSIEISSGHVSSEC---HCAVCKEAFELGNEAREMPCKHIYHEDCILPWLK 231
A+K +I + + + G ++ HCAVC E+++ + R +PCKH++H+ C+ PWL
Sbjct: 237 AAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLS 296
Query: 232 MRNSCPVCRQELPAA 246
+CP+C+ + A
Sbjct: 297 EHCTCPMCKLNILKA 311
>sp|Q8GYT9|SIS3_ARATH E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3
PE=2 SV=2
Length = 358
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 170 PENLPASKASIESMPSIEISSGHVSSEC-HCAVCKEAFELGNEAREMPCKHIYHEDCILP 228
P A +A I+ +P + + V +C C +C E F +G+E R +PC H +H +CI
Sbjct: 207 PAQTEAVEALIQELPKFRLKA--VPDDCGECLICLEEFHIGHEVRGLPCAHNFHVECIDQ 264
Query: 229 WLKMRNSCPVCR 240
WL++ CP CR
Sbjct: 265 WLRLNVKCPRCR 276
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 199 CAVCKEAFELGNEAREMPCKHIYHEDCILPWL-KMRNSCPVCRQEL 243
CA+C E +E G++ R +PC H YH C+ PWL K + +CPVC+Q++
Sbjct: 240 CAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 10/185 (5%)
Query: 66 FSTAVMLGQDSGQRTTLSFQRRSRRRGNSRSQQLDFFNPVIVLRGNNNEENSSGSSFDLY 125
F V+ Q +G + + S + S +D + + E +++ +
Sbjct: 104 FDIKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIDILKKIDIPSVFIGESSANSLKDEFT 163
Query: 126 YEDG----QGSESTLRPIPERVLGFLMDSGFHLLLHQLSQID--LTALSRPENLPASKAS 179
YE G E +L P+ ++ FL+ G L+L + I + R K
Sbjct: 164 YEKGGHVILVPELSL-PLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQ 222
Query: 180 IESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWL-KMRNSCPV 238
++ +P + G C A+C E +E G++ R +PC H YH C+ PWL K + +CPV
Sbjct: 223 LKKLPVHKFKKGDEYDVC--AICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPV 280
Query: 239 CRQEL 243
C+Q++
Sbjct: 281 CKQKV 285
>sp|Q8L649|BB_ARATH E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1
SV=1
Length = 248
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 176 SKASIESMPSIEISSGHVSSECH----CAVCKEAFELGNEAREMPCKHIYHEDCILPWLK 231
S+ IE++P+ + G + S C +C+ +++G +PCKH+YH +CI WL
Sbjct: 170 SQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLS 229
Query: 232 MRNSCPVCRQEL 243
+ CPVC E+
Sbjct: 230 INKVCPVCNSEV 241
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 154 LLLHQLS---QIDLTALSRPENLPASKASIESMPSIEISSGHVSSECHCAVCKEAFELGN 210
+LH+ S + + +S+P I S+P+ + + + CAVC E +
Sbjct: 52 FVLHRRSAFQDLSFSVVSQPPKRGLDSLVIASLPTFVVGIKNDVAGTECAVCLSLLEEKD 111
Query: 211 EAREMP-CKHIYHEDCILPWLKMRNSCPVCRQE 242
AR +P CKH++H C+ WL +++CPVCR E
Sbjct: 112 NARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTE 144
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 168 SRPENLPASKASIESMPSIEISS-GHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCI 226
++P L +KA IE +PS + H S + C VC FE+ R +PC H +H C+
Sbjct: 325 AKPRGL--TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCV 382
Query: 227 LPWLKMRNSCPVCRQE 242
WLK +CP+CR +
Sbjct: 383 DKWLKANRTCPICRAD 398
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 16/79 (20%)
Query: 198 HCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCR----------------Q 241
+CAVC E F++ + R +PCKHI+H CI PWL +CP+C+ Q
Sbjct: 264 NCAVCIENFKVKDVIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKALGYWGDPEDTQ 323
Query: 242 ELPAAAAAAAEESSMALSI 260
ELP AA S LS+
Sbjct: 324 ELPTPEAAPGRVSVGNLSV 342
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 168 SRPENLPASKASIESMPSIEIS-SGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCI 226
++P L +KA IE +PS + H S + C VC FE+ R +PC H +H C+
Sbjct: 268 AKPRGL--TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCV 325
Query: 227 LPWLKMRNSCPVCRQE 242
WLK +CP+CR +
Sbjct: 326 DKWLKANRTCPICRAD 341
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 199 CAVCKEAFELGNEAREMPCKHIYHEDCILPWL-KMRNSCPVCRQE-LPAAAAAAAEESS 255
CA+C + +E G++ R +PC H YH C+ PWL K + +CPVC+Q+ +P+ + +E S
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSETDS 298
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 177 KASIESMPS-----IEISSGHVSSECHCAVCKEAFELGNEAREMP-CKHIYHEDCILPWL 230
K +E+ P+ ++ S CAVC F +E R +P C H++H DCI PWL
Sbjct: 106 KEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDPWL 165
Query: 231 KMRNSCPVCRQEL--PAAAAAAAEESSM 256
+CP+CR L P + AAAE S +
Sbjct: 166 AAAVTCPLCRANLTAPPVSLAAAESSDL 193
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 199 CAVCKEAFELGNEAREMPCKHIYHEDCILPWL-KMRNSCPVCRQEL 243
CA+C + +E G++ R +PC H YH C+ PWL K + +CPVC+Q++
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 199 CAVCKEAFELGNEAREMPCKHIYHEDCILPWL-KMRNSCPVCRQEL 243
CA+C + +E G++ R +PC H YH C+ PWL K + +CPVC+Q++
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 199 CAVCKEAFELGNEAREMPCKHIYHEDCILPWL-KMRNSCPVCRQEL 243
CA+C + +E G++ R +PC H YH C+ PWL K + +CPVC+Q++
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 168 SRPENLPASKASIESMPSIEISS-GHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCI 226
++P L +KA IE +PS + H S + C VC FE R +PC H +H C+
Sbjct: 350 AKPRGL--TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCV 407
Query: 227 LPWLKMRNSCPVCRQE 242
WLK +CP+CR +
Sbjct: 408 DKWLKANRTCPICRAD 423
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 198 HCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQELPAAAAAAAEESSM 256
+CAVC E F++ + R +PCKHI+H CI PWL +CP+C+ ++ A E +
Sbjct: 268 NCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKALGYWGEPGDV 326
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 176 SKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWL-KMRN 234
+K ++ +P+ + G C A+C + +E G++ R +PC H YH C+ PWL + R
Sbjct: 209 TKEQLKQIPTHDYQKGDQYDVC--AICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRK 266
Query: 235 SCPVCRQEL 243
+CP+C+Q +
Sbjct: 267 TCPICKQPV 275
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 193 VSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWLKMRNSCPVCRQEL 243
+ S+C CA+C EA++ + R +PCKH +H++CI PWL +CP+C+ ++
Sbjct: 298 LDSDC-CAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDV 347
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 199 CAVCKEAFELGNEAREMPCKHIYHEDCILPWL-KMRNSCPVCRQEL 243
CA+C + +E G++ R +PC H YH C+ PWL + R +CP+C+Q +
Sbjct: 230 CAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPV 275
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 176 SKASIESMPSIEISSGHVSSECHCAVCKEAFELGNEAREMPCKHIYHEDCILPWL-KMRN 234
+K ++ +P+ + G C A+C + +E G++ R +PC H YH C+ PWL + R
Sbjct: 209 TKEQLKQIPTHDYQKGDEYDVC--AICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTRK 266
Query: 235 SCPVCRQEL 243
+CP+C+Q +
Sbjct: 267 TCPICKQPV 275
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,555,522
Number of Sequences: 539616
Number of extensions: 4929671
Number of successful extensions: 13940
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 13483
Number of HSP's gapped (non-prelim): 533
length of query: 351
length of database: 191,569,459
effective HSP length: 118
effective length of query: 233
effective length of database: 127,894,771
effective search space: 29799481643
effective search space used: 29799481643
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)