Citrus Sinensis ID: 045749

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Protein Sequence
MSPIINFINQLITISRRQQQQPWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHcccEEEEEEEEEcccccccHHHHHHHHHHHccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHccccEEEEEEEEEcccHHHHHHHHHHHHHHHccccEEEEEEccccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEcc
Coil and Loop (DISEMBL)
MSPIINFINQLITISRRQQQQPWLVVLPVSALGFIILLKHSMSLLKCIYITflrqpknlksygswalitgatDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEiqaenpntqinivEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINnvgitypkamffhevdekEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV
Flexible Loop (DISEMBL)
MSPIINFINQLITISRRQQQQPWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRvnlegttrvtkavltgmmrrkkgaivnigsgaaiv
Low Complexity Region (SEG)
MSPIINFINQLITISrrqqqqPWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV
Disordered region (IsUnstruct)
***IINFINQLITISRRQQQQPWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNI*******
Disordered Region (DISOPRED)
****INFINQLITISRRQQQQPWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV
Disordered Region (DISEMBL)
MSPIINFINQLITISRRQQQQPWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV
Disordered Region (DISPRO)
*SPIINFINQLITISRRQQQQPWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSPIINFINQLITISRRQQQQPWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	210	2.2.26 [Sep-21-2011]
Q9FYL6	312	Very-long-chain 3-oxoacyl	yes	no	0.895	0.602	0.572	6e-58
Q8L9C4	318	Very-long-chain 3-oxoacyl	no	no	0.890	0.588	0.549	6e-54
Q1DNC5	349	Very-long-chain 3-oxoacyl	N/A	no	0.833	0.501	0.416	2e-32
A7F8T1	334	Very-long-chain 3-oxoacyl	N/A	no	0.866	0.544	0.365	4e-30
A6SG70	331	Very-long-chain 3-oxoacyl	N/A	no	0.866	0.549	0.370	4e-30
Q3SXM5	330	Inactive hydroxysteroid d	yes	no	0.766	0.487	0.422	4e-29
Q0CY11	353	Very-long-chain 3-oxoacyl	N/A	no	0.723	0.430	0.420	1e-28
Q5R7K0	330	Inactive hydroxysteroid d	yes	no	0.766	0.487	0.410	2e-28
A5PJF6	330	Inactive hydroxysteroid d	yes	no	0.766	0.487	0.410	2e-28
A2QCH3	346	Very-long-chain 3-oxoacyl	yes	no	0.823	0.5	0.376	2e-28

>sp|Q9FYL6|KCR2_ARATH Very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 OS=Arabidopsis thaliana GN=KCR2 PE=2 SV=1

 Score =  223 bits (568), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 111/194 (57%), Positives = 143/194 (73%), Gaps = 6/194 (3%)

Query: 18  QQQQPWLVVLPVSALGFIILLK-HSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIG 76
            + QPW +   V  +GF+ LL+   + LLK     FL  PK LK YGSWA++TGAT+GIG
Sbjct: 7   SESQPWYLHF-VCFIGFLFLLRVLFIPLLKWFTTRFLLTPKRLKRYGSWAMVTGATEGIG 65

Query: 77  KAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI 136
           +AFAH+LA+HGLNLILVSRN +KLE +S++ Q E P+ +I I+ +DFS    S G   AI
Sbjct: 66  RAFAHELAKHGLNLILVSRNLSKLESVSDDFQQEFPHIKIKIIPFDFS----SEGGYGAI 121

Query: 137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK 196
           E  I GLEVG+LINNVGITYP+AMFFHEVD+  W  I+RVNLE TT VT++++  M+ R+
Sbjct: 122 EEGIKGLEVGILINNVGITYPRAMFFHEVDQLTWTKILRVNLEATTWVTRSLIGPMLHRR 181

Query: 197 KGAIVNIGSGAAIV 210
           +GAIVNI SGAA+V
Sbjct: 182 RGAIVNISSGAAVV 195

Probable reductase, but unlike KCR1, has no beta-ketoacyl-coenzyme A reductase activity.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|Q8L9C4|KCR1_ARATH Very-long-chain 3-oxoacyl-CoA reductase 1 OS=Arabidopsis thaliana GN=KCR1 PE=1 SV=1

 Score =  210 bits (534), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 105/191 (54%), Positives = 144/191 (75%), Gaps = 4/191 (2%)

Query: 18  QQQQPWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGK 77
           + Q  WL++L V  LG I + K   +LL+  YI FLR  KNL+ YGSWA+ITG TDGIGK
Sbjct: 8   KSQPTWLLILFV--LGSISIFKFIFTLLRSFYIYFLRPSKNLRRYGSWAIITGPTDGIGK 65

Query: 78  AFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE 137
           AFA QLAQ GLNLILV+RN +KL+ +S+ I+++   TQI  V  DFS D+     +K I+
Sbjct: 66  AFAFQLAQKGLNLILVARNPDKLKDVSDSIRSKYSQTQILTVVMDFSGDIDEG--VKRIK 123

Query: 138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK 197
            +I+GL+VG+LINN G++YP A +FHEVDE+   +++++N+EGTT+VT+AVL  M++RKK
Sbjct: 124 ESIEGLDVGILINNAGMSYPYAKYFHEVDEELINNLIKINVEGTTKVTQAVLPNMLKRKK 183

Query: 198 GAIVNIGSGAA 208
           GAI+N+GSGAA
Sbjct: 184 GAIINMGSGAA 194

Beta-ketoacyl-coenzyme A reductase required for the elongation of fatty acids precursors of sphingolipids, triacylglycerols, cuticular waxes and suberin. Responsible for the first reduction step in very long-chain fatty acids (VLCFAs) synthesis. Decreased expression of KCR1 (RNAi) leads to plants with fused vegetative and reproductive organs, and abnormal trichome, epidermal cell and root morphology. Cannot be complemented by KCR2.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 3

EC: 0

>sp|Q1DNC5|MKAR_COCIM Very-long-chain 3-oxoacyl-CoA reductase OS=Coccidioides immitis (strain RS) GN=CIMG_08188 PE=3 SV=2

 Score =  139 bits (349), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 116/180 (64%), Gaps = 5/180 (2%)

Query: 29  VSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYG---SWALITGATDGIGKAFAHQLAQ 85
           V A G + LL   +S L+ ++  F+   K+L S+G   SWAL+TGA+DGIGK +A Q+A+
Sbjct: 33  VFATGGLFLLSRGLSFLRALFSIFILPGKSLSSFGPKGSWALVTGASDGIGKEYALQIAR 92

Query: 86  HGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEV 145
            G N+ILVSR+ +KL  +++EI + NPN     V  DFS +  +  + + ++  I  L++
Sbjct: 93  KGYNIILVSRSASKLSAVASEITSANPNILTKTVSMDFSEN--NDEDYEKLKDIIKDLDI 150

Query: 146 GVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
            +LINNVG+++   + F +  EKE  DI+ +N  GT RVT+ V  GMM+RK+G I+ +GS
Sbjct: 151 SILINNVGLSHSIPVPFVQTPEKEMKDIIAINCLGTLRVTQLVAPGMMQRKRGLILTMGS 210

Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3-ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.

Coccidioides immitis (strain RS) (taxid: 246410)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|A7F8T1|MKAR_SCLS1 Very-long-chain 3-oxoacyl-CoA reductase OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_14012 PE=3 SV=1

 Score =  131 bits (329), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 121/189 (64%), Gaps = 7/189 (3%)

Query: 22  PWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYG---SWALITGATDGIGKA 78
           P +V+  ++ +G  I+    +S ++ +   F+   KNL++YG   +WA++TGA+DG+GK 
Sbjct: 11  PKVVLTGLAGIGAFIVAGKVISYIRLLLSLFVLSGKNLRTYGKKGTWAVVTGASDGLGKE 70

Query: 79  FAHQLAQHGLNLILVSRNHNKLEKISNEIQAE--NPNTQINIVEYDFSCDVVSAGNIKAI 136
           +A QLAQ G N++L+SR  +KL+ +++EIQ +    N Q  I+  DF+ +     +   +
Sbjct: 71  YAIQLAQKGFNIVLISRTESKLQTLASEIQTKYAGSNIQTKILAMDFAAN--RDEDYAKL 128

Query: 137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK 196
           +  +DGL+VG+L+NNVG ++   + F +  ++E  DI+ +N  GT RVT+ V  GM++RK
Sbjct: 129 KALVDGLDVGILVNNVGQSHSIPVPFIQTPKEEMRDIITINCIGTLRVTQIVAPGMVQRK 188

Query: 197 KGAIVNIGS 205
           +G I+ +GS
Sbjct: 189 RGLILTMGS 197

Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3-ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.

Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (taxid: 665079)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|A6SG70|MKAR_BOTFB Very-long-chain 3-oxoacyl-CoA reductase OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_11561 PE=3 SV=1

 Score =  131 bits (329), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 120/189 (63%), Gaps = 7/189 (3%)

Query: 22  PWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYG---SWALITGATDGIGKA 78
           P  V+  ++ +G  I+    +S ++ +   F+   KNL++YG   +WA++TGA+DG+GK 
Sbjct: 8   PKAVLTGLAGIGAFIVAGKVISYIQLLLSLFVLSGKNLRTYGKKGTWAVVTGASDGLGKE 67

Query: 79  FAHQLAQHGLNLILVSRNHNKLEKISNEIQAE--NPNTQINIVEYDFSCDVVSAGNIKAI 136
           +A QLAQ G N++LVSR  +KL+ +++EIQ +    N Q  I+  DF+ +     +   +
Sbjct: 68  YAIQLAQKGFNIVLVSRTESKLQTLASEIQTKYAGSNIQTKILAMDFAAN--RDEDYAKL 125

Query: 137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK 196
           +  +DGL+VG+L+NNVG ++   + F +  ++E  DI+ +N  GT RVT+ V  GM++RK
Sbjct: 126 KALVDGLDVGILVNNVGQSHSIPVPFIQTPKEEMRDIITINCMGTLRVTQIVAPGMVQRK 185

Query: 197 KGAIVNIGS 205
           +G I+ +GS
Sbjct: 186 RGLILTMGS 194

Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3-ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.

Botryotinia fuckeliana (strain B05.10) (taxid: 332648)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q3SXM5|HSDL1_HUMAN Inactive hydroxysteroid dehydrogenase-like protein 1 OS=Homo sapiens GN=HSDL1 PE=1 SV=3

 Score =  127 bits (320), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 105/168 (62%), Gaps = 7/168 (4%)

Query: 43  SLLKCIYITFLRQPKNL-KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE 101
           SL++  +I  L    +L K YG WA+++GATDGIGKA+A +LA  GLN+IL+SRN  KL+
Sbjct: 46  SLIRLHFIPRLGSRADLIKQYGRWAVVSGATDGIGKAYAEELASRGLNIILISRNEEKLQ 105

Query: 102 KISNEIQAENPNTQINIVEYDFSCDVVSAGNIK-AIEMAIDGLEVGVLINNVGITYPKAM 160
            ++ +I A+    + +I+  DFS    S   I   I  A+   +VG+L+NNVG+ YP   
Sbjct: 106 VVAKDI-ADTYKVETDIIVADFS----SGREIYLPIREALKDKDVGILVNNVGVFYPYPQ 160

Query: 161 FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
           +F ++ E +  DI+ VN+   + +   VL GM+ RKKGAIV I SG+ 
Sbjct: 161 YFTQLSEDKLWDIINVNIAAASLMVHVVLPGMVERKKGAIVTISSGSC 208

Homo sapiens (taxid: 9606)

>sp|Q0CY11|MKAR_ASPTN Very-long-chain 3-oxoacyl-CoA reductase OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_01423 PE=3 SV=1

 Score =  126 bits (317), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 106/157 (67%), Gaps = 5/157 (3%)

Query: 52  FLRQPKNLKSYG---SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQ 108
           F+   K+L+S+G   SWA++TGA+DG+GK FA QLA+ G N++LVSR  +KL+ +S+E+ 
Sbjct: 60  FVLPGKSLRSFGPKGSWAVVTGASDGLGKEFALQLARAGYNIVLVSRTASKLDTLSDELT 119

Query: 109 AENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEK 168
           ++ P+ Q  ++  DF+ +  S  + + ++  I  L+V VLINNVG ++   + F    E+
Sbjct: 120 SKYPSVQTKVLAMDFARNQDS--DYQKLKELIGDLDVAVLINNVGKSHDMPVPFALTSEE 177

Query: 169 EWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
           E  DIV +N  GT RVT+ V+ GMM+R++G I+ +GS
Sbjct: 178 EMTDIVTINCMGTLRVTQLVVPGMMQRRRGLILTMGS 214

Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3-ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.

Aspergillus terreus (strain NIH 2624 / FGSC A1156) (taxid: 341663)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5R7K0|HSDL1_PONAB Inactive hydroxysteroid dehydrogenase-like protein 1 OS=Pongo abelii GN=HSDL1 PE=2 SV=1

 Score =  125 bits (315), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 104/168 (61%), Gaps = 7/168 (4%)

Query: 43  SLLKCIYITFLRQPKNL-KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE 101
           SL++  +I  L    +L K YG WA+++GATDGIG+A+A +LA  GLN+IL+SRN  KL+
Sbjct: 46  SLIRLHFIPRLGSRADLIKQYGRWAVVSGATDGIGRAYAEELASRGLNIILISRNEEKLQ 105

Query: 102 KISNEIQAENPNTQINIVEYDFSCDVVSAGNIK-AIEMAIDGLEVGVLINNVGITYPKAM 160
            ++ +I A+    +  I+  DFS    S   I   I  A+   ++G+L+NNVG+ YP   
Sbjct: 106 VVAKDI-ADTYKVETGIIVADFS----SGREIYLPIREALKDKDIGILVNNVGVFYPYPQ 160

Query: 161 FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
           +F ++ E +  DI+ VN+   + +   VL GM+ RKKGAIV I SG+ 
Sbjct: 161 YFTQLSEDKLWDIINVNIAAASLMVHVVLPGMVERKKGAIVTISSGSC 208

Pongo abelii (taxid: 9601)

>sp|A5PJF6|HSDL1_BOVIN Inactive hydroxysteroid dehydrogenase-like protein 1 OS=Bos taurus GN=HSDL1 PE=2 SV=1

 Score =  125 bits (314), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 104/168 (61%), Gaps = 7/168 (4%)

Query: 43  SLLKCIYITFLRQPKNL-KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE 101
           SL++  +I  L    +L K YG WA+++GATDGIG+A+A +LA  GLN++L+SR+  KL+
Sbjct: 46  SLIRLHFIPRLVSRADLIKQYGRWAVVSGATDGIGRAYAEELASRGLNIVLISRSQEKLQ 105

Query: 102 KISNEIQAENPNTQINIVEYDFSCDVVSAGNI-KAIEMAIDGLEVGVLINNVGITYPKAM 160
            ++ +I A+    + +I+  DFS    S   I   I  A+   ++G+L+NNVG+ YP   
Sbjct: 106 MVAKDI-ADTYKVETDIIVADFS----SGREIYDMIREALQDRDIGILVNNVGVFYPYPQ 160

Query: 161 FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
           +F +V E    DIV VN+   + +   VL GM+ RKKGAIV I SG+ 
Sbjct: 161 YFTQVSEDTLWDIVNVNIAAASLMVHIVLPGMVERKKGAIVTISSGSC 208

Bos taurus (taxid: 9913)

>sp|A2QCH3|MKAR_ASPNC Very-long-chain 3-oxoacyl-CoA reductase OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An02g03570 PE=3 SV=1

 Score =  125 bits (313), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 110/178 (61%), Gaps = 5/178 (2%)

Query: 31  ALGFIILLKHSMSLLKCIYITFLRQPKNLKSYG---SWALITGATDGIGKAFAHQLAQHG 87
           A G + ++  ++  ++ +   F+   K L+S+G   SWA++TGA+DG+GK FA QLA+  
Sbjct: 32  AAGSLFVVSRALVFVRVLLSLFVLPGKPLRSFGPKGSWAVVTGASDGLGKEFALQLARAD 91

Query: 88  LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGV 147
            N++LVSR  +KL+ +SNEI  + P+ Q   +  DF+ +  S  + + ++  +D L+V V
Sbjct: 92  FNILLVSRTASKLDTLSNEITTKFPSVQTKTLAMDFARNQDS--DYEKLKELVDELDVSV 149

Query: 148 LINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
           L+NNVG ++     F    E E  DIV +N  GT R T+ V+ GMM+RK+G ++ +GS
Sbjct: 150 LVNNVGKSHSIPTPFALTPEDEMTDIVTINCLGTLRATQLVVPGMMQRKRGLVLTMGS 207

Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3-ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.

Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	210
224100099	214	predicted protein [Populus trichocarpa]	0.914	0.897	0.681	9e-68
224107705	319	predicted protein [Populus trichocarpa]	0.895	0.589	0.670	2e-64
255547942	342	steroid dehydrogenase, putative [Ricinus	0.938	0.576	0.646	6e-63
255547938	331	steroid dehydrogenase, putative [Ricinus	0.938	0.595	0.631	3e-62
356528428	325	PREDICTED: inactive hydroxysteroid dehyd	0.885	0.572	0.613	9e-60
62956020	307	3-ketoacyl-CoA reductase 2 [Gossypium hi	0.890	0.609	0.617	2e-59
449435019	332	PREDICTED: very-long-chain 3-oxoacyl-CoA	0.880	0.557	0.574	4e-57
449512958	332	PREDICTED: very-long-chain 3-oxoacyl-CoA	0.880	0.557	0.569	1e-56
15221751	312	beta-ketoacyl reductase 2 [Arabidopsis t	0.895	0.602	0.572	3e-56
28565597	319	putative 3-ketoacyl-CoA reductase 1 [Bra	0.890	0.586	0.570	6e-56

>gi|224100099|ref|XP_002311743.1| predicted protein [Populus trichocarpa] gi|222851563|gb|EEE89110.1| predicted protein [Populus trichocarpa]

 Score =  261 bits (668), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 137/201 (68%), Positives = 156/201 (77%), Gaps = 9/201 (4%)

Query: 8   INQLITISRRQQQQPWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWAL 67
           IN L+T      Q  WL++  VS+LGF+  LK S SLLK +Y TFLR  KNLK YGSWAL
Sbjct: 6   INHLLT------QPMWLIL--VSSLGFLSFLKTSTSLLKWVYATFLRPKKNLKDYGSWAL 57

Query: 68  ITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDV 127
           ITGATDGIGKAFAHQLAQ  LNLILV RN  KLE +S+EIQAE+P T+I  V +DFS   
Sbjct: 58  ITGATDGIGKAFAHQLAQKDLNLILVGRNPTKLETVSSEIQAEHPGTKIKTVVFDFSSK- 116

Query: 128 VSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKA 187
            SAG    IE A +GL+VGVLINN+GITYP A FFHEVDEK WMDIVRVNL GT+RVTKA
Sbjct: 117 ASAGVRSIIEKATEGLDVGVLINNLGITYPAASFFHEVDEKVWMDIVRVNLVGTSRVTKA 176

Query: 188 VLTGMMRRKKGAIVNIGSGAA 208
           VL GM++RK+GAI+NIGSGAA
Sbjct: 177 VLPGMIKRKRGAIINIGSGAA 197

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224107705|ref|XP_002314571.1| predicted protein [Populus trichocarpa] gi|222863611|gb|EEF00742.1| predicted protein [Populus trichocarpa]

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 128/191 (67%), Positives = 152/191 (79%), Gaps = 3/191 (1%)

Query: 21  QP-WLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAF 79
           QP WL++   S+LGFI  LK S  LL  +Y TFLR  ++LK YGSWA+ITGATDGIGKAF
Sbjct: 12  QPMWLLLF--SSLGFISFLKTSTLLLNWVYATFLRPKRDLKDYGSWAVITGATDGIGKAF 69

Query: 80  AHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA 139
           AHQLAQ GLNLILVSRN NKL+ +S+EI AE+P T+I  V +DFS  V +      +E A
Sbjct: 70  AHQLAQKGLNLILVSRNPNKLKTVSSEILAEHPGTKIKTVVFDFSSKVSTRTIQGVMEKA 129

Query: 140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGA 199
           ++GL VG+LINNVGITYP A FFHEVDEK WMDIVRVNLEGT+RVT+AVL GM++RK+GA
Sbjct: 130 VEGLNVGLLINNVGITYPAARFFHEVDEKVWMDIVRVNLEGTSRVTRAVLPGMIQRKRGA 189

Query: 200 IVNIGSGAAIV 210
           IVNIGSGA+ V
Sbjct: 190 IVNIGSGASSV 200

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547942|ref|XP_002515028.1| steroid dehydrogenase, putative [Ricinus communis] gi|223546079|gb|EEF47582.1| steroid dehydrogenase, putative [Ricinus communis]

 Score =  246 bits (627), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 130/201 (64%), Positives = 157/201 (78%), Gaps = 4/201 (1%)

Query: 11  LITISRRQQQQPWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLK-SYGSWALIT 69
           L  I+    Q  WL +  VS LGF+ LL +S +LL  +Y T LRQPKNLK +YGSWALIT
Sbjct: 2   LACINHLTTQPLWLPI--VSFLGFLSLLNYSFTLLNWVYKTVLRQPKNLKENYGSWALIT 59

Query: 70  GATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVS 129
           GATDGIGKAFA QLA+ GLNLILVSRN NKL+ +S+EIQ E P+T+I I+  DFS +  S
Sbjct: 60  GATDGIGKAFAFQLAKQGLNLILVSRNLNKLKTVSSEIQEEFPSTKIKIMNLDFSSED-S 118

Query: 130 AGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVL 189
           +G +  IE AI G++VGVLINNVGITYP+A FF EVDE  WM IV+VN+EGTTRVT+AVL
Sbjct: 119 SGLVHVIEEAIKGVDVGVLINNVGITYPRARFFDEVDESTWMSIVKVNVEGTTRVTEAVL 178

Query: 190 TGMMRRKKGAIVNIGSGAAIV 210
            GM+ R++GAIVNIGSGA+IV
Sbjct: 179 PGMIERRRGAIVNIGSGASIV 199

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547938|ref|XP_002515026.1| steroid dehydrogenase, putative [Ricinus communis] gi|223546077|gb|EEF47580.1| steroid dehydrogenase, putative [Ricinus communis]

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 127/201 (63%), Positives = 158/201 (78%), Gaps = 4/201 (1%)

Query: 11  LITISRRQQQQPWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLK-SYGSWALIT 69
           L  I+    Q  WL++  VS LGF+ L  +S +LL  +Y T LRQPKNLK +YGSWALIT
Sbjct: 2   LACINHLTTQPLWLLI--VSFLGFLSLFNYSFTLLNWVYKTVLRQPKNLKENYGSWALIT 59

Query: 70  GATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVS 129
           GATDGIGKAFA QLA+ GLNLILVSRN NKL+ +S+EIQ E P+T+I I+  DFS +  S
Sbjct: 60  GATDGIGKAFAFQLAKQGLNLILVSRNLNKLKTVSSEIQEEFPSTKIKIMNLDFSSED-S 118

Query: 130 AGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVL 189
           +G +  IE AI G++VGVLINNVGITYP+A FF EVDE  WM +V+VN++GTTRVT+AVL
Sbjct: 119 SGLVHVIEEAIKGVDVGVLINNVGITYPQARFFDEVDESTWMSVVKVNVKGTTRVTEAVL 178

Query: 190 TGMMRRKKGAIVNIGSGAAIV 210
           +GM+ R++GAIVNIGSGA+IV
Sbjct: 179 SGMIERRRGAIVNIGSGASIV 199

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528428|ref|XP_003532805.1| PREDICTED: inactive hydroxysteroid dehydrogenase-like protein 1-like [Glycine max]

 Score =  235 bits (599), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 116/189 (61%), Positives = 150/189 (79%), Gaps = 3/189 (1%)

Query: 23  WLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNL-KSYGSWALITGATDGIGKAFAH 81
           +L +L +S LG I+ L   +S    I+ T  R  KNL +SYGSWAL+TGAT+GIGKAFAH
Sbjct: 16  YLTLLIISCLGLIVTLNRFISFFTWIFRTCFRSEKNLLRSYGSWALVTGATNGIGKAFAH 75

Query: 82  QLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID 141
           QLAQ GLNLILVSR+  KL+ ++ EI+A++P T++ IVE DF+ D+     ++ +E A +
Sbjct: 76  QLAQRGLNLILVSRSFQKLKTVAGEIKAKHPGTRVKIVEMDFAGDLTEG--LRRVEEASE 133

Query: 142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIV 201
           GL+VGVLINNVGITYP+AMFFHEV+EK W +IVRVN+EGTTRVTK VL GM++R+KGAIV
Sbjct: 134 GLDVGVLINNVGITYPRAMFFHEVEEKVWRNIVRVNIEGTTRVTKIVLRGMLQRRKGAIV 193

Query: 202 NIGSGAAIV 210
           NIGSGA++V
Sbjct: 194 NIGSGASVV 202

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|62956020|gb|AAY23355.1| 3-ketoacyl-CoA reductase 2 [Gossypium hirsutum]

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/191 (61%), Positives = 150/191 (78%), Gaps = 4/191 (2%)

Query: 20  QQPWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAF 79
           Q  WL+ L  S LGF+  L  S+SLL  ++ TF R PKNL +YGSWALITGATDGIGKAF
Sbjct: 2   QPTWLLAL--SFLGFLSFLTRSISLLNWVFTTFFRSPKNLNNYGSWALITGATDGIGKAF 59

Query: 80  AHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA 139
           A+QLA+ GLNLILVSRN NKL+ +S EI+A+ P+ +I +V  DFS ++ +   +  IE A
Sbjct: 60  ANQLARQGLNLILVSRNLNKLKTVSAEIRAQFPHLKIKVVAQDFSGNISAGAGL--IEEA 117

Query: 140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGA 199
           + G+EVGVLINNVGITYP+AM+FHEV+E+    I+RVNL+GTT VT+AVL GM+ RK+GA
Sbjct: 118 VKGVEVGVLINNVGITYPRAMYFHEVEEEVVKGIIRVNLKGTTWVTRAVLPGMLNRKRGA 177

Query: 200 IVNIGSGAAIV 210
           IVN+GSGA+IV
Sbjct: 178 IVNVGSGASIV 188

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435019|ref|XP_004135293.1| PREDICTED: very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470-like [Cucumis sativus]

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 108/188 (57%), Positives = 148/188 (78%), Gaps = 3/188 (1%)

Query: 23  WLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAFAHQ 82
           WL++L  S LGF  +L HS ++ + +Y  FLR  K+L+ YGSW ++TGATDGIGK+FA+Q
Sbjct: 18  WLLIL--SFLGFFTILWHSATVARWVYRAFLRPSKDLRYYGSWGIVTGATDGIGKSFAYQ 75

Query: 83  LAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG 142
           LA+ GLNL+LVSR+  KL+ +S +IQ+E P+T++ I+E DF+ D +S G I  IE  I+ 
Sbjct: 76  LARAGLNLVLVSRSSMKLKAVSKDIQSEFPDTKVKIIELDFTEDDIS-GGIAEIEEVIED 134

Query: 143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVN 202
           L+VG+LINNVGITYP A FFHEVDEK WM++ +VN++GTT VTKAVL  M+++ +GAIVN
Sbjct: 135 LDVGILINNVGITYPNASFFHEVDEKVWMNVFKVNVKGTTWVTKAVLPKMIKKNRGAIVN 194

Query: 203 IGSGAAIV 210
           IGSGAA++
Sbjct: 195 IGSGAAVI 202

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449512958|ref|XP_004164189.1| PREDICTED: very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470-like [Cucumis sativus]

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 107/188 (56%), Positives = 147/188 (78%), Gaps = 3/188 (1%)

Query: 23  WLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAFAHQ 82
           WL++L  S LGF  +L HS ++ + +Y  FLR  K+L+ YGSW ++TGATDGIGK+FA+Q
Sbjct: 18  WLLIL--SFLGFFTILWHSATVARWVYRAFLRPSKDLRYYGSWGIVTGATDGIGKSFAYQ 75

Query: 83  LAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG 142
           LA+ GLNL+LVSR+  KL+ +S +IQ+E P+T++ I+E DF+ D +S G I  IE  I+ 
Sbjct: 76  LARAGLNLVLVSRSSMKLKAVSKDIQSEFPDTKVKIIELDFTEDDIS-GGIAEIEEVIED 134

Query: 143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVN 202
           L+VG+LINNVGITYP A FFHEVDEK WM++ +VN++GTT VTK VL  M+++ +GAIVN
Sbjct: 135 LDVGILINNVGITYPNASFFHEVDEKVWMNVFKVNVKGTTWVTKVVLPKMIKKNRGAIVN 194

Query: 203 IGSGAAIV 210
           IGSGAA++
Sbjct: 195 IGSGAAVI 202

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15221751|ref|NP_173856.1| beta-ketoacyl reductase 2 [Arabidopsis thaliana] gi|75309928|sp|Q9FYL6.1|KCR2_ARATH RecName: Full=Very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470; AltName: Full=Beta-ketoacyl reductase 2; Short=AtKCR2 gi|9743335|gb|AAF97959.1|AC000103_9 F21J9.13 [Arabidopsis thaliana] gi|124301104|gb|ABN04804.1| At1g24470 [Arabidopsis thaliana] gi|332192413|gb|AEE30534.1| beta-ketoacyl reductase 2 [Arabidopsis thaliana]

 Score =  223 bits (568), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 111/194 (57%), Positives = 143/194 (73%), Gaps = 6/194 (3%)

Query: 18  QQQQPWLVVLPVSALGFIILLK-HSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIG 76
            + QPW +   V  +GF+ LL+   + LLK     FL  PK LK YGSWA++TGAT+GIG
Sbjct: 7   SESQPWYLHF-VCFIGFLFLLRVLFIPLLKWFTTRFLLTPKRLKRYGSWAMVTGATEGIG 65

Query: 77  KAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI 136
           +AFAH+LA+HGLNLILVSRN +KLE +S++ Q E P+ +I I+ +DFS    S G   AI
Sbjct: 66  RAFAHELAKHGLNLILVSRNLSKLESVSDDFQQEFPHIKIKIIPFDFS----SEGGYGAI 121

Query: 137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK 196
           E  I GLEVG+LINNVGITYP+AMFFHEVD+  W  I+RVNLE TT VT++++  M+ R+
Sbjct: 122 EEGIKGLEVGILINNVGITYPRAMFFHEVDQLTWTKILRVNLEATTWVTRSLIGPMLHRR 181

Query: 197 KGAIVNIGSGAAIV 210
           +GAIVNI SGAA+V
Sbjct: 182 RGAIVNISSGAAVV 195

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|28565597|gb|AAO43448.1| putative 3-ketoacyl-CoA reductase 1 [Brassica napus]

 Score =  223 bits (567), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 109/191 (57%), Positives = 148/191 (77%), Gaps = 4/191 (2%)

Query: 18  QQQQPWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGK 77
           + Q  WL+VL   +LG I +L+ + +LL  +YI FLR  KNL+ YGSWA+ITG TDGIGK
Sbjct: 8   KSQPTWLLVL--FSLGSISILRFTFTLLTSLYIYFLRPGKNLRRYGSWAIITGPTDGIGK 65

Query: 78  AFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE 137
           AFA QLAQ GLNL+LV+RN +KL+ +S+ IQA+  NTQI  V  DFS D+   G ++ I+
Sbjct: 66  AFAFQLAQKGLNLVLVARNPDKLKDVSDSIQAKYSNTQIKTVVMDFSGDI--DGGVRRIK 123

Query: 138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK 197
            AI+GLEVG+LINN G++YP A +FHEVDE+   +++++N+EGTT+VT+AVL  M++RK+
Sbjct: 124 EAIEGLEVGILINNAGVSYPYAKYFHEVDEEMLGNLIKINVEGTTKVTQAVLVNMLKRKR 183

Query: 198 GAIVNIGSGAA 208
           GAIVN+GSGAA
Sbjct: 184 GAIVNMGSGAA 194

Source: Brassica napus

Species: Brassica napus

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	210
TAIR|locus:2023996	312	KCR2 "beta-ketoacyl reductase	0.876	0.589	0.578	5.6e-52
TAIR|locus:2008630	318	KCR1 "beta-ketoacyl reductase	0.866	0.572	0.564	1.2e-49
DICTYBASE|DDB_G0275049	307	DDB_G0275049 "short-chain dehy	0.833	0.570	0.361	1.3e-31
UNIPROTKB|Q3SXM5	330	HSDL1 "Inactive hydroxysteroid	0.761	0.484	0.425	2.7e-29
UNIPROTKB|F1S5S7	330	HSDL1 "Uncharacterized protein	0.761	0.484	0.407	7.1e-29
UNIPROTKB|A5PJF6	330	HSDL1 "Inactive hydroxysteroid	0.761	0.484	0.413	1.5e-28
FB|FBgn0051809	316	CG31809 [Drosophila melanogast	0.785	0.522	0.406	3.1e-28
FB|FBgn0051810	324	CG31810 [Drosophila melanogast	0.785	0.509	0.406	3.1e-28
UNIPROTKB|E2QTV0	330	HSDL1 "Uncharacterized protein	0.761	0.484	0.395	3.9e-28
RGD|1308433	330	Hsdl1 "hydroxysteroid dehydrog	0.761	0.484	0.413	1.7e-27

TAIR|locus:2023996 KCR2 "beta-ketoacyl reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 110/190 (57%), Positives = 141/190 (74%)

Query:    22 PWLVVLPVSALGFIILLKHS-MSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAFA 80
             PW +   V  +GF+ LL+   + LLK     FL  PK LK YGSWA++TGAT+GIG+AFA
Sbjct:    11 PWYLHF-VCFIGFLFLLRVLFIPLLKWFTTRFLLTPKRLKRYGSWAMVTGATEGIGRAFA 69

Query:    81 HQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI 140
             H+LA+HGLNLILVSRN +KLE +S++ Q E P+ +I I+ +DFS    S G   AIE  I
Sbjct:    70 HELAKHGLNLILVSRNLSKLESVSDDFQQEFPHIKIKIIPFDFS----SEGGYGAIEEGI 125

Query:   141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAI 200
              GLEVG+LINNVGITYP+AMFFHEVD+  W  I+RVNLE TT VT++++  M+ R++GAI
Sbjct:   126 KGLEVGILINNVGITYPRAMFFHEVDQLTWTKILRVNLEATTWVTRSLIGPMLHRRRGAI 185

Query:   201 VNIGSGAAIV 210
             VNI SGAA+V
Sbjct:   186 VNISSGAAVV 195

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0045703 "ketoreductase activity" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0018454 "acetoacetyl-CoA reductase activity" evidence=IMP

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

TAIR|locus:2008630 KCR1 "beta-ketoacyl reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
 Identities = 105/186 (56%), Positives = 143/186 (76%)

Query:    23 WLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAFAHQ 82
             WL++L V  LG I + K   +LL+  YI FLR  KNL+ YGSWA+ITG TDGIGKAFA Q
Sbjct:    13 WLLILFV--LGSISIFKFIFTLLRSFYIYFLRPSKNLRRYGSWAIITGPTDGIGKAFAFQ 70

Query:    83 LAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG 142
             LAQ GLNLILV+RN +KL+ +S+ I+++   TQI  V  DFS D+   G +K I+ +I+G
Sbjct:    71 LAQKGLNLILVARNPDKLKDVSDSIRSKYSQTQILTVVMDFSGDI-DEG-VKRIKESIEG 128

Query:   143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVN 202
             L+VG+LINN G++YP A +FHEVDE+   +++++N+EGTT+VT+AVL  M++RKKGAI+N
Sbjct:   129 LDVGILINNAGMSYPYAKYFHEVDEELINNLIKINVEGTTKVTQAVLPNMLKRKKGAIIN 188

Query:   203 IGSGAA 208
             +GSGAA
Sbjct:   189 MGSGAA 194

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0045703 "ketoreductase activity" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009790 "embryo development" evidence=IMP

GO:0018454 "acetoacetyl-CoA reductase activity" evidence=IMP

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=IMP

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

GO:0042335 "cuticle development" evidence=ISS

DICTYBASE|DDB_G0275049 DDB_G0275049 "short-chain dehydrogenase/reductase (SDR) family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 65/180 (36%), Positives = 115/180 (63%)

Query:    31 ALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNL 90
             ++G  ILL+++   +  +Y  F+R P N+  YGSW ++TGATDGIGKA+ H+ A+  LN+
Sbjct:    13 SIGLGILLRYAARFVLFLYAYFVRSPININKYGSWVVVTGATDGIGKAYCHEFAKKKLNV 72

Query:    91 ILVSRNHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLI 149
             +LVSR+ +KL+++++EI  EN    Q  ++ +DF+         + +   + G+++GVL+
Sbjct:    73 VLVSRSLDKLKEVASEI--ENKFKVQTKVISFDFN--TTDDSKYQELFKQLSGIDIGVLV 128

Query:   150 NNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
             NNVGI+Y   M+  E+       ++ +N+   T ++K +LT M+ +K+GAI+N+ S + I
Sbjct:   129 NNVGISYDHPMYLEELQPASIESLINLNVRAATVLSKFILTSMVEKKRGAIINLASVSGI 188

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|Q3SXM5 HSDL1 "Inactive hydroxysteroid dehydrogenase-like protein 1" [Homo sapiens (taxid:9606)]

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 71/167 (42%), Positives = 105/167 (62%)

Query:    43 SLLKCIYITFLRQPKNL-KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE 101
             SL++  +I  L    +L K YG WA+++GATDGIGKA+A +LA  GLN+IL+SRN  KL+
Sbjct:    46 SLIRLHFIPRLGSRADLIKQYGRWAVVSGATDGIGKAYAEELASRGLNIILISRNEEKLQ 105

Query:   102 KISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA-IEMAIDGLEVGVLINNVGITYPKAM 160
              ++ +I A+    + +I+  DFS    S   I   I  A+   +VG+L+NNVG+ YP   
Sbjct:   106 VVAKDI-ADTYKVETDIIVADFS----SGREIYLPIREALKDKDVGILVNNVGVFYPYPQ 160

Query:   161 FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA 207
             +F ++ E +  DI+ VN+   + +   VL GM+ RKKGAIV I SG+
Sbjct:   161 YFTQLSEDKLWDIINVNIAAASLMVHVVLPGMVERKKGAIVTISSGS 207

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F1S5S7 HSDL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 68/167 (40%), Positives = 105/167 (62%)

Query:    43 SLLKCIYITFLRQPKNL-KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE 101
             SL++  +I  L    +L K YG WA+++GATDGIG+A+A +LA  GLN++L+SRN  KL+
Sbjct:    46 SLIRLHFIPRLVSRADLIKQYGRWAVVSGATDGIGRAYAEELASRGLNIVLISRNQEKLQ 105

Query:   102 KISNEIQAENPNTQINIVEYDFSCDVVSAGNI-KAIEMAIDGLEVGVLINNVGITYPKAM 160
              ++ +I A+    + +++  DFS    S   I   I  A+   ++G+L+NNVG+ YP   
Sbjct:   106 TVARDI-ADAYRVETDVIVADFS----SGREIYDRIREALKDRDIGILVNNVGVFYPYPQ 160

Query:   161 FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA 207
             +F +V E    DIV VN+   + + + VL GM+ RKKGA+V I SG+
Sbjct:   161 YFTQVSEDTLWDIVNVNIAAASLLVRIVLPGMVERKKGAVVTISSGS 207

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|A5PJF6 HSDL1 "Inactive hydroxysteroid dehydrogenase-like protein 1" [Bos taurus (taxid:9913)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 69/167 (41%), Positives = 104/167 (62%)

Query:    43 SLLKCIYITFLRQPKNL-KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE 101
             SL++  +I  L    +L K YG WA+++GATDGIG+A+A +LA  GLN++L+SR+  KL+
Sbjct:    46 SLIRLHFIPRLVSRADLIKQYGRWAVVSGATDGIGRAYAEELASRGLNIVLISRSQEKLQ 105

Query:   102 KISNEIQAENPNTQINIVEYDFSCDVVSAGNI-KAIEMAIDGLEVGVLINNVGITYPKAM 160
              ++ +I A+    + +I+  DFS    S   I   I  A+   ++G+L+NNVG+ YP   
Sbjct:   106 MVAKDI-ADTYKVETDIIVADFS----SGREIYDMIREALQDRDIGILVNNVGVFYPYPQ 160

Query:   161 FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA 207
             +F +V E    DIV VN+   + +   VL GM+ RKKGAIV I SG+
Sbjct:   161 YFTQVSEDTLWDIVNVNIAAASLMVHIVLPGMVERKKGAIVTISSGS 207

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0051809 CG31809 [Drosophila melanogaster (taxid:7227)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 72/177 (40%), Positives = 113/177 (63%)

Query:    38 LKHSMSLLKCIYITFLRQ--PKNL-KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVS 94
             LK   S++K +   F R   PK L + +G+WA++TGATDGIGK +A +LA+ GLNL+LVS
Sbjct:    20 LKSLFSIIKSVVEPFFRPNLPKTLAEKFGNWAVVTGATDGIGKEYARELARQGLNLVLVS 79

Query:    95 RNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA-IEMAIDGLEVGVLINNVG 153
             R   KL  ++NEI ++  N +I  +  DF+        + A IE  ++G+EVG+L+NNVG
Sbjct:    80 RKEEKLIAVTNEIGSQY-NVKIKWIVADFA----KGREVYAHIEKELNGIEVGILVNNVG 134

Query:   154 ITY-PKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
               + P+++   +V E    D++ VN+   T +T+ +L  M+ R+KGAIVN+GS + +
Sbjct:   135 TIHDPESL--DKVSEDMLWDLLTVNVGSVTMLTRKILPQMISRRKGAIVNLGSSSEL 189

GO:0008202 "steroid metabolic process" evidence=ISS

GO:0016229 "steroid dehydrogenase activity" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0051810 CG31810 [Drosophila melanogaster (taxid:7227)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 72/177 (40%), Positives = 113/177 (63%)

Query:    38 LKHSMSLLKCIYITFLRQ--PKNL-KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVS 94
             LK   S++K +   F R   PK L + +G+WA++TGATDGIGK +A +LA+ GLNL+LVS
Sbjct:    28 LKSLFSIIKSVVEPFFRPNLPKTLAEKFGNWAVVTGATDGIGKEYARELARQGLNLVLVS 87

Query:    95 RNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA-IEMAIDGLEVGVLINNVG 153
             R   KL  ++NEI ++  N +I  +  DF+        + A IE  ++G+EVG+L+NNVG
Sbjct:    88 RKEEKLIAVTNEIGSQY-NVKIKWIVADFA----KGREVYAHIEKELNGIEVGILVNNVG 142

Query:   154 ITY-PKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
               + P+++   +V E    D++ VN+   T +T+ +L  M+ R+KGAIVN+GS + +
Sbjct:   143 TIHDPESL--DKVSEDMLWDLLTVNVGSVTMLTRKILPQMISRRKGAIVNLGSSSEL 197

GO:0016229 "steroid dehydrogenase activity" evidence=ISS

GO:0008202 "steroid metabolic process" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E2QTV0 HSDL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 66/167 (39%), Positives = 105/167 (62%)

Query:    43 SLLKCIYITFLRQPKNL-KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE 101
             SL++  +I  L    +L K YG WA+++GATDGIG+A+A +LA  GL++IL+SRN +KL+
Sbjct:    46 SLIRLHFIPRLVSRADLIKQYGRWAVVSGATDGIGRAYAEELASRGLSIILISRNQDKLQ 105

Query:   102 KISNEIQAENPNTQINIVEYDFSCDVVSAGNI-KAIEMAIDGLEVGVLINNVGITYPKAM 160
              ++ +I A+    +  ++  DFS    +   I   I  A+   ++G+L+NNVG+ YP   
Sbjct:   106 MVAKDI-ADTYKVETEVIVADFS----NGREIYDPIREALKDKDIGILVNNVGVFYPYPQ 160

Query:   161 FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA 207
             +F +V E +  DI+ VN+   + +   VL GM+ RKKGA+V I SG+
Sbjct:   161 YFTQVSEDKLWDIINVNIAAASLMVHIVLPGMVERKKGAVVTISSGS 207

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|1308433 Hsdl1 "hydroxysteroid dehydrogenase like 1" [Rattus norvegicus (taxid:10116)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 69/167 (41%), Positives = 102/167 (61%)

Query:    43 SLLKCIYITFL-RQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE 101
             SL++  +I  L  +P  +K YG WA+I+GATDGIGKA+A +LA HGLN+IL+S+   KL+
Sbjct:    46 SLVRLHFIPRLGSRPDLIKQYGRWAVISGATDGIGKAYAEELASHGLNIILISQEEEKLQ 105

Query:   102 KISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA-IEMAIDGLEVGVLINNVGITYPKAM 160
              ++  I A+    +  ++  DFS        I A I  A+   ++G+L+N+VG  YP   
Sbjct:   106 AVAKHI-ADTYRVETLVLVADFS----RGREIYAPIREALRDRDIGILVNDVGAFYPYPQ 160

Query:   161 FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA 207
             +F +V E    DIV VN+   + +   VL GM+ RKKGAIV + SG+
Sbjct:   161 YFSQVPEDTIWDIVNVNIAAASLMVHIVLPGMVERKKGAIVTVSSGS 207

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FYL6	KCR2_ARATH	1, ., -, ., -, ., -	0.5721	0.8952	0.6025	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	210
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	7e-80
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	4e-56
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	6e-37
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-28
cd05233	234	cd05233, SDR_c, classical (c) SDRs	3e-28
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-28
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	4e-26
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	4e-26
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-24
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-24
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	4e-24
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-23
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	4e-23
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-23
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	1e-22
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-21
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-21
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	4e-21
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-21
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	9e-21
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-20
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-20
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-20
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	1e-19
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-19
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	2e-19
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	3e-19
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	3e-19
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	5e-19
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	8e-18
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-17
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-17
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	1e-17
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	3e-17
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	5e-17
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	6e-17
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	7e-17
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	7e-17
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-16
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-16
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	2e-16
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	4e-16
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	4e-16
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	5e-16
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	6e-16
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	6e-16
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	7e-16
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	1e-15
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-15
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-15
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	1e-15
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-15
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-15
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-15
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	3e-15
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	3e-15
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	5e-15
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	6e-15
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	8e-15
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	9e-15
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	9e-15
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-14
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-14
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-14
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	3e-14
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	3e-14
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-14
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	3e-14
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	3e-14
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	5e-14
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	5e-14
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	7e-14
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	8e-14
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-13
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	3e-13
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	3e-13
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	3e-13
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	6e-13
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	9e-13
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	9e-13
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-12
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	2e-12
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	2e-12
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	2e-12
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-12
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-12
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-12
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-12
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	4e-12
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	4e-12
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	4e-12
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	4e-12
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	5e-12
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	6e-12
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	6e-12
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	8e-12
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	9e-12
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	1e-11
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-11
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	1e-11
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	2e-11
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-11
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	2e-11
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-11
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-11
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-11
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	3e-11
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	3e-11
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	4e-11
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	7e-11
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	8e-11
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	1e-10
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	1e-10
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	1e-10
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-10
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-10
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	2e-10
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	3e-10
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	3e-10
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	4e-10
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	4e-10
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	5e-10
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	6e-10
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	7e-10
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	7e-10
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	7e-10
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	9e-10
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	9e-10
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-09
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	1e-09
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	1e-09
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	1e-09
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	2e-09
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	2e-09
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	2e-09
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-09
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-09
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-09
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	3e-09
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	4e-09
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-09
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	4e-09
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	6e-09
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	6e-09
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	7e-09
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	1e-08
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	1e-08
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	1e-08
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	2e-08
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	2e-08
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	2e-08
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-08
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	3e-08
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	5e-08
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	6e-08
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	6e-08
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	7e-08
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	8e-08
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	8e-08
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	9e-08
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	1e-07
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-07
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	1e-07
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	1e-07
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-07
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	2e-07
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	2e-07
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	3e-07
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	3e-07
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	3e-07
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-07
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	3e-07
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	4e-07
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	5e-07
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	5e-07
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	5e-07
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	7e-07
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	8e-07
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	9e-07
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	9e-07
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	9e-07
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-06
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-06
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	1e-06
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	1e-06
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-06
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	2e-06
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-06
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	5e-06
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	5e-06
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	7e-06
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	9e-06
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-05
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	1e-05
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	1e-05
PRK08655	437	PRK08655, PRK08655, prephenate dehydrogenase; Prov	2e-05
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-05
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	2e-05
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	2e-05
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	2e-05
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	3e-05
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	3e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	3e-05
pfam08659	181	pfam08659, KR, KR domain	6e-05
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	6e-05
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	7e-05
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	8e-05
cd01078	194	cd01078, NAD_bind_H4MPT_DH, NADP binding domain of	1e-04
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	1e-04
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	2e-04
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	2e-04
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	2e-04
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-04
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	3e-04
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	3e-04
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	5e-04
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	6e-04
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	6e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	8e-04
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	0.001
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	0.001
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	0.001
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	0.001
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	0.001
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	0.002
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	0.002
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	0.002
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	0.002
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.002
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	0.003
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	0.004
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	0.004

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score =  240 bits (615), Expect = 7e-80
 Identities = 111/201 (55%), Positives = 150/201 (74%), Gaps = 4/201 (1%)

Query: 10  QLITISRRQQQQPWLVVLPVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALIT 69
           +L  + + + Q  WL+VL    LG + +LK   ++L  +Y+ FLR  KNLK YGSWAL+T
Sbjct: 2   ELCFVDKLKSQPLWLLVL--FVLGSLSILKFFFTILNWVYVYFLRPAKNLKKYGSWALVT 59

Query: 70  GATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVS 129
           G TDGIGK FA QLA+ GLNL+LV+RN +KL+ +S+ IQ++   TQI  V  DFS D+  
Sbjct: 60  GPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDE 119

Query: 130 AGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVL 189
              +K I+  I+GL+VGVLINNVG++YP A FFHEVDE+   ++++VN+EGTT+VT+AVL
Sbjct: 120 G--VKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVL 177

Query: 190 TGMMRRKKGAIVNIGSGAAIV 210
            GM++RKKGAI+NIGSGAAIV
Sbjct: 178 PGMLKRKKGAIINIGSGAAIV 198

Length = 320

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score =  177 bits (452), Expect = 4e-56
 Identities = 65/148 (43%), Positives = 98/148 (66%), Gaps = 4/148 (2%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G+WA++TGATDGIGKA+A +LA+ G N+IL+SR   KL+ ++ EI  E    +   +  D
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEI-EEKYGVETKTIAAD 59

Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           FS         + IE  ++GL++G+L+NNVGI++    +F E  E E  DI+ VN+  T 
Sbjct: 60  FS---AGDDIYERIEKELEGLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATL 116

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           ++T+ +L GM++RKKGAIVNI S A ++
Sbjct: 117 KMTRLILPGMVKRKKGAIVNISSFAGLI 144

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  129 bits (326), Expect = 6e-37
 Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 9/155 (5%)

Query: 58  NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQIN 117
                G  ALITGA+ GIG   A QLA+ G NLILV+R  +KLE ++ E++ +    ++ 
Sbjct: 1   PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGV-EVE 59

Query: 118 IVEYDFSCDVVSAGNIKAIEMAI--DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVR 175
           ++  D S        ++ +E  +   G  + VL+NN G        F E+   E  ++++
Sbjct: 60  VIPADLSDP----EALERLEDELKERGGPIDVLVNNAGFGTFGP--FLELSLDEEEEMIQ 113

Query: 176 VNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +N+   TR+TKAVL GM+ R  G I+NIGS A ++
Sbjct: 114 LNILALTRLTKAVLPGMVERGAGHIINIGSAAGLI 148

Length = 265

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  107 bits (268), Expect = 1e-28
 Identities = 54/152 (35%), Positives = 80/152 (52%), Gaps = 20/152 (13%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  ALITGA  GIG+A A  LA+ G+N+ L++R    L+ ++ E++A      I      
Sbjct: 7   GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIA----- 61

Query: 123 FSCDVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMF--FHEVDEKEWMDIVR 175
                    + + +  AI+ L+     + +LINN GI    + F  F E+D  EW  I++
Sbjct: 62  ----TADVSDYEEVTAAIEQLKNELGSIDILINNAGI----SKFGKFLELDPAEWEKIIQ 113

Query: 176 VNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA 207
           VNL G    T+AVL  M+ R+ G I+NI S A
Sbjct: 114 VNLMGVYYATRAVLPSMIERQSGDIINISSTA 145

Length = 239

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  105 bits (265), Expect = 3e-28
 Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 11/147 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA+ GIG+A A +LA+ G  ++L  RN   L +++  I+A   N            
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELA-AIEALGGNAVA------VQA 53

Query: 126 DVVSAGNIKA-IEMAIDGLE-VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV    +++A +E A++    + +L+NN GI  P      E+ +++W  ++ VNL G   
Sbjct: 54  DVSDEEDVEALVEEALEEFGRLDILVNNAGIARPG--PLEELTDEDWDRVLDVNLTGVFL 111

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +T+A L  M ++  G IVNI S A + 
Sbjct: 112 LTRAALPHMKKQGGGRIVNISSVAGLR 138

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  106 bits (266), Expect = 3e-28
 Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 10/147 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA+ GIG+A A +LA  G  +++   N    E ++ E++A     ++         
Sbjct: 8   ALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARV------LVF 61

Query: 126 DVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV     ++  IE A++    + +L+NN GIT         + E++W  ++ VNL GT  
Sbjct: 62  DVSDEAAVRALIEAAVEAFGALDILVNNAGITRDAL--LPRMSEEDWDRVIDVNLTGTFN 119

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           V +A L  M++ + G IVNI S + + 
Sbjct: 120 VVRAALPPMIKARYGRIVNISSVSGVT 146

Length = 246

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  100 bits (251), Expect = 4e-26
 Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 10/142 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA+ GIG+A A +LA  G  + +  R+     +   EI+A   N            
Sbjct: 3   ALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNA------AALEA 56

Query: 126 DVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV     ++  +E        V +L+NN GIT  +      + E++W  ++ VNL G   
Sbjct: 57  DVSDREAVEALVEKVEAEFGPVDILVNNAGIT--RDNLLMRMSEEDWDAVINVNLTGVFN 114

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
           VT+AV+  M++R+ G I+NI S
Sbjct: 115 VTQAVIRAMIKRRSGRIINISS 136

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  100 bits (251), Expect = 4e-26
 Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 6/150 (4%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G   LITG + GIGKA A +L + G N+I+V+R+ +KLE+   EI+AE   +    V Y 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASG-QKVSY- 58

Query: 123 FSCDVVSAGNI-KAIEMAID-GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
            S D+     + +A   A++ G    +++N  GI+ P    F ++  +E+   + VN  G
Sbjct: 59  ISADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPG--LFEDLTAEEFERGMDVNYFG 116

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +  V  AVL  M  ++ G IV + S AA+V
Sbjct: 117 SLNVAHAVLPLMKEQRPGHIVFVSSQAALV 146

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 96.5 bits (241), Expect = 1e-24
 Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 11/143 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TGA+ GIG+A A +LA+ G  +I+  R+     E++  E++A               
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALG------VV 54

Query: 125 CDVVSAGNIKA-IEMAIDGLE-VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           CDV    ++KA +E   + L  + +L+NN GIT  +      + E++W  ++  NL G  
Sbjct: 55  CDVSDREDVKAVVEEIEEELGPIDILVNNAGIT--RDNLLMRMKEEDWDAVIDTNLTGVF 112

Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
            +T+AVL  M++++ G I+NI S
Sbjct: 113 NLTQAVLRIMIKQRSGRIINISS 135

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 96.2 bits (240), Expect = 2e-24
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 18/148 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           ALITGA+ GIG+A A  LA+ G  ++L +R   +LE     +  E        +  D + 
Sbjct: 9   ALITGASSGIGEATARALAEAGAKVVLAARREERLE----ALADEIGAGAALALALDVT- 63

Query: 126 DVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
                 +  A+E AI+ L      + +L+NN G+         E D  +W  ++  N++G
Sbjct: 64  ------DRAAVEAAIEALPEEFGRIDILVNNAGL-ALGD-PLDEADLDDWDRMIDTNVKG 115

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
               T+AVL GM+ RK G I+N+GS A 
Sbjct: 116 LLNGTRAVLPGMVERKSGHIINLGSIAG 143

Length = 246

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 95.0 bits (237), Expect = 4e-24
 Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 16/148 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           ALITGA+ GIGKA A   A+ G +L LV+R+ + LE ++ E+++     +      D S 
Sbjct: 9   ALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLS- 65

Query: 126 DVVSAGNIKAIEMAI-----DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
                 N +AI   I           VLINN G+ Y   +   E+   +W  ++++NL  
Sbjct: 66  ------NPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLL--EMPLSDWQWVIQLNLTS 117

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
             +   AVL GM  R  G I+N+ S AA
Sbjct: 118 VFQCCSAVLPGMRARGGGLIINVSSIAA 145

Length = 241

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 93.4 bits (233), Expect = 2e-23
 Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 11/147 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TGA  G+G+A A +LA+ G ++++  R +    E++   ++A     Q         
Sbjct: 9   ALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQA------VQ 62

Query: 125 CDVVSAGNIKAI-EMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            DV     ++A    A++    + +L+NN GI   K +   ++ + EW +++ VNL G  
Sbjct: 63  ADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLA--DMSDDEWDEVIDVNLSGVF 120

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAI 209
            + +AV+  M +++ G IVNI S A +
Sbjct: 121 HLLRAVVPPMRKQRGGRIVNISSVAGL 147

Length = 249

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 92.7 bits (231), Expect = 4e-23
 Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 18/151 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITGA+ GIG+A A + A+ G  LIL  R   +L+++++E+ A+ P             
Sbjct: 3   VLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKV-----LPLQL 57

Query: 126 DVVSAGNIKAIEMAIDGL-----EVGVLINNVGITY--PKAMFFHEVDEKEWMDIVRVNL 178
           DV    + ++IE A++ L     ++ +L+NN G+      A    E D ++W  ++  N+
Sbjct: 58  DV---SDRESIEAALENLPEEFRDIDILVNNAGLALGLDPA---QEADLEDWETMIDTNV 111

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
           +G   VT+ +L  M+ R +G I+N+GS A  
Sbjct: 112 KGLLNVTRLILPIMIARNQGHIINLGSIAGR 142

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 92.6 bits (231), Expect = 4e-23
 Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 11/143 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TGA+ GIG+A A +LA  G N+++  + +    E +  EI A               
Sbjct: 8   ALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALA------VQ 61

Query: 125 CDVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            DV  A +++ A++ A      V +L+NN GIT  +      + E++W  ++  NL G  
Sbjct: 62  GDVSDAESVERAVDEAKAEFGGVDILVNNAGIT--RDNLLMRMKEEDWDRVIDTNLTGVF 119

Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
            +TKAV   MM+++ G I+NI S
Sbjct: 120 NLTKAVARPMMKQRSGRIINISS 142

Length = 248

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 91.6 bits (228), Expect = 1e-22
 Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 10/150 (6%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+T A+ GIG A A  LA+ G  + + +RN   LE+ ++E++A      +  V   
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRA--GGAGVLAVV-- 56

Query: 123 FSCDVVSAGNIKAI-EMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
              D+    +I  + E A D    V +L+NN G   P    F E+ +++W++   + L  
Sbjct: 57  --ADLTDPEDIDRLVEKAGDAFGRVDILVNNAG--GPPPGPFAELTDEDWLEAFDLKLLS 112

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             R+ +AVL GM  R  G IVNI S     
Sbjct: 113 VIRIVRAVLPGMKERGWGRIVNISSLTVKE 142

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 88.7 bits (220), Expect = 1e-21
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 10/146 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK--LEKISNEIQAENPNTQINIVEYDF 123
           AL+TGA+ GIG+A A  LA+ G  +++ +R   +   E ++  I+      +   V  D 
Sbjct: 8   ALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEA-GGGRAAAVAADV 66

Query: 124 SCDVVSAGN-IKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           S D  S    + A E     ++  +L+NN GI  P A    E+ E++W  ++ VNL G  
Sbjct: 67  SDDEESVEALVAAAEEEFGRID--ILVNNAGIAGPDAP-LEELTEEDWDRVIDVNLLGAF 123

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAA 208
            +T+A L  M    K  IVNI S A 
Sbjct: 124 LLTRAALPLMK---KQRIVNISSVAG 146

Length = 251

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 88.4 bits (220), Expect = 1e-21
 Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 17/149 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITG + GIG A A  LA  G  +I  +RN +KLE        E  N  + ++E     
Sbjct: 3   VLITGCSSGIGLALALALAAQGYRVIATARNPDKLES-----LGELLNDNLEVLE----L 53

Query: 126 DVVSAGNIK-AIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV    +IK A++  I+    G   VL+NN G          E   +E  ++  VN+ G 
Sbjct: 54  DVTDEESIKAAVKEVIE--RFGRIDVLVNNAGYGLFGP--LEETSIEEVRELFEVNVFGP 109

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            RVT+A L  M ++  G IVN+ S A +V
Sbjct: 110 LRVTRAFLPLMRKQGSGRIVNVSSVAGLV 138

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 87.0 bits (216), Expect = 4e-21
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 12/150 (8%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G+  LITG T GIG A A +  + G  +I+  R   +L     E + E PN         
Sbjct: 5   GNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLA----EAKKELPNIHT------ 54

Query: 123 FSCDVVSAGNIKAIEMAI--DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
              DV  A +++A+  A+  +   + +LINN GI  P  +     D  +    +  NL G
Sbjct: 55  IVLDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIG 114

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             R+ KA L  + ++ +  IVN+ SG A V
Sbjct: 115 PIRLIKAFLPHLKKQPEATIVNVSSGLAFV 144

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 86.8 bits (216), Expect = 7e-21
 Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 10/146 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA+ GIG+  A + A  G  +++  RN    E+++ EI A      +       + 
Sbjct: 8   AIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAV-------AA 60

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV    +++A +  A++    V +L+NN G T  +     +VDE E+  I  VN++    
Sbjct: 61  DVSDEADVEAAVAAALERFGSVDILVNNAGTT-HRNGPLLDVDEAEFDRIFAVNVKSPYL 119

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAI 209
            T+A +  M     GAIVN+ S A +
Sbjct: 120 WTQAAVPAMRGEGGGAIVNVASTAGL 145

Length = 251

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 86.3 bits (214), Expect = 9e-21
 Identities = 54/145 (37%), Positives = 75/145 (51%), Gaps = 10/145 (6%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA+ GIG   A  LA+ G N+++ SRN  K E+    I+ E            
Sbjct: 5   GKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATA------ 58

Query: 123 FSCDVVSAGNIKAIEMAI--DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           F+CDV     IKA   AI  D  ++ +L+NN GI         E  E EW D++ VNL G
Sbjct: 59  FTCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPA--EEFPEAEWRDVIDVNLNG 116

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGS 205
              V++AV   M+++  G I+NI S
Sbjct: 117 VFFVSQAVARHMIKQGHGKIINICS 141

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 86.3 bits (214), Expect = 1e-20
 Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 4/148 (2%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  ALITGA+ GIG A A +    G ++++V+R+ + L +  +E+  E P  +++ +  D
Sbjct: 9   GQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAAD 68

Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            S D      +  +E   DGL   +L+NN G    KA    +  E EW  I   NL    
Sbjct: 69  VSDDEDRRAILDWVEDHWDGLH--ILVNNAGGNIRKAAI--DYTEDEWRGIFETNLFSAF 124

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            +++     + +    AIVNIGS + + 
Sbjct: 125 ELSRYAHPLLKQHASSAIVNIGSVSGLT 152

Length = 257

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 85.5 bits (212), Expect = 2e-20
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 10/149 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITGA   IGKAF   L   G  LIL   N   LE++  E+     N  I +       
Sbjct: 5   ILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALE-----L 59

Query: 126 DVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMF--FHEVDEKEWMDIVRVNLEGT 181
           D+ S  +IK  IE  ++    + +LINN   + PK     F E   ++W +++ VNL G 
Sbjct: 60  DITSKESIKELIESYLEKFGRIDILINNAYPS-PKVWGSRFEEFPYEQWNEVLNVNLGGA 118

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              ++A +    ++ KG+I+NI S   ++
Sbjct: 119 FLCSQAFIKLFKKQGKGSIINIASIYGVI 147

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 84.9 bits (211), Expect = 3e-20
 Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 11/146 (7%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEY 121
           G  A++TGA+ GIG+A A  LA+ G  +++    N    +++  EI+ E        V+ 
Sbjct: 5   GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEG--GDAIAVK- 61

Query: 122 DFSCDVVSAGNIKA-IEMAIDGLE-VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
               DV S  +++  +E  ++    + +L+NN GI+    +   ++ ++EW  ++ VNL 
Sbjct: 62  ---ADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVT--DMTDEEWDRVIDVNLT 116

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGS 205
           G   +T+  L  M++RK G IVNI S
Sbjct: 117 GVMLLTRYALPYMIKRKSGVIVNISS 142

Length = 247

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 83.7 bits (207), Expect = 1e-19
 Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 20/147 (13%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITG+  GIG   A  LA++G  +I+      + E    +++ E       I  +    
Sbjct: 12  ILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEG------IKAHAAPF 65

Query: 126 DVVSAGNIKAIEMAIDGLE-----VGVLINNVGIT--YPKAMFFHEVDEKEWMDIVRVNL 178
           +V      + +E AI+ +E     + VLINN GI   +P    F E  E+EW D++ VN 
Sbjct: 66  NVTHK---QEVEAAIEHIEKDIGPIDVLINNAGIQRRHP----FTEFPEQEWNDVIAVNQ 118

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGS 205
                V++AV   M++R+ G I+NI S
Sbjct: 119 TAVFLVSQAVARYMVKRQAGKIINICS 145

Length = 254

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 83.4 bits (206), Expect = 2e-19
 Identities = 53/145 (36%), Positives = 74/145 (51%), Gaps = 14/145 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD-FS 124
           AL+TGAT GIG A A +L + GL + + +R    L     E++          VE D  +
Sbjct: 6   ALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAG-------VEADGRT 58

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           CDV S   I+A +  A+     + VL+NN G          E+ ++ W+D+V  NL G  
Sbjct: 59  CDVRSVPEIEALVAAAVARYGPIDVLVNNAG--RSGGGATAELADELWLDVVETNLTGVF 116

Query: 183 RVTKAVLT--GMMRRKKGAIVNIGS 205
           RVTK VL   GM+ R  G I+NI S
Sbjct: 117 RVTKEVLKAGGMLERGTGRIINIAS 141

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 83.0 bits (206), Expect = 2e-19
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 14/144 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIG+A A +LA  G  +I+V    +     +  ++A     +          
Sbjct: 9   ALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARA------RQV 62

Query: 126 DVVSAGNIKAIEMAIDGLE----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV     +KA      G+E    + +L+ N GI       F E+D+++W  ++ VNL GT
Sbjct: 63  DVRDRAALKA--AVAAGVEDFGRLDILVANAGIFPLTP--FAEMDDEQWERVIDVNLTGT 118

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
             +T+A L  ++R   G IV   S
Sbjct: 119 FLLTQAALPALIRAGGGRIVLTSS 142

Length = 251

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 82.6 bits (205), Expect = 3e-19
 Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 7/145 (4%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           +ITGA+ GIG+  A+ LA+ G  L+L +R   +LE++ +E   E      ++V  D S D
Sbjct: 7   IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSEC-LELGAPSPHVVPLDMS-D 64

Query: 127 VVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           +  A   + +E A+     + +LINN GI+      FH+        I+ VN  G   +T
Sbjct: 65  LEDA--EQVVEEALKLFGGLDILINNAGISMRS--LFHDTSIDVDRKIMEVNYFGPVALT 120

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAIV 210
           KA L  ++ R +G+IV + S A  +
Sbjct: 121 KAALPHLIERSQGSIVVVSSIAGKI 145

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 82.3 bits (204), Expect = 3e-19
 Identities = 52/149 (34%), Positives = 68/149 (45%), Gaps = 13/149 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITG   GIG A A  L + G  + ++ RN N       E+QA NP  +   V+ D + 
Sbjct: 3   AIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAA--ELQAINPKVKATFVQCDVTS 60

Query: 126 -DVVSAGNIKAIEM--AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            + ++A   KAIE    +D     +LINN GI   K+  F       W   + VNL G  
Sbjct: 61  WEQLAAAFKKAIEKFGRVD-----ILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVI 115

Query: 183 RVTKAVLTGM---MRRKKGAIVNIGSGAA 208
             T   L  M      K G IVNIGS A 
Sbjct: 116 NTTYLALHYMDKNKGGKGGVIVNIGSVAG 144

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 82.0 bits (203), Expect = 5e-19
 Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 18/150 (12%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA  GIG A A   A+ G  + L   +    E+ +  I  +    ++  V   
Sbjct: 7   GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP-- 64

Query: 123 FSCDVVSAGNIKAI----EMAIDGLEVGVLINNVGITY---PKAMFFHEVDEKEWMDIVR 175
              DV  A ++ A     E A   L+  VL+NN GI     P AM      +++W     
Sbjct: 65  --ADVTDAASVAAAVAAAEEAFGPLD--VLVNNAGINVFADPLAM-----TDEDWRRCFA 115

Query: 176 VNLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
           V+L+G     +AVL GM+ R +G+IVNI S
Sbjct: 116 VDLDGAWNGCRAVLPGMVERGRGSIVNIAS 145

Length = 260

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 78.8 bits (195), Expect = 8e-18
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 8/101 (7%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G   +ITGA  GIGK  A +LA+ G ++I+  RN  K E+ + EI+ E  N ++ +++ D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 123 FSC--DV-VSAGNIKAIEMAIDGLEVGVLINNVGITYPKAM 160
            S    V   A    A    +D     +LINN GI  P   
Sbjct: 61  LSSLASVRQFAEEFLARFPRLD-----ILINNAGIMAPPRR 96

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 78.1 bits (193), Expect = 1e-17
 Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 10/147 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITG   GIG+  A + A+ G  ++++  N    E+ +N ++            + + C
Sbjct: 2   VLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKV------HYYKC 55

Query: 126 DVVSAGNIKAIEMAI--DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV     +      I  +  +V +LINN G+   K     E+ ++E      VN      
Sbjct: 56  DVSKREEVYEAAKKIKKEVGDVTILINNAGVVSGK--KLLELPDEEIEKTFEVNTLAHFW 113

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            TKA L  M+ R  G IV I S A ++
Sbjct: 114 TTKAFLPDMLERNHGHIVTIASVAGLI 140

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 78.2 bits (193), Expect = 1e-17
 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 12/154 (7%)

Query: 59  LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINI 118
           +K+ G+  LITG   GIG A A +  + G  +I+  RN  +L     E +AENP      
Sbjct: 1   MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERL----AEAKAENPEI---- 52

Query: 119 VEYDFSCDVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRV 176
             +   CDV    + + +   +      + VLINN GI   + +   E    +    +  
Sbjct: 53  --HTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIAT 110

Query: 177 NLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           NL    R+T  +L  ++R+ +  I+N+ SG A V
Sbjct: 111 NLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV 144

Length = 245

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 78.1 bits (193), Expect = 1e-17
 Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 16/150 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TGA  GIG A A  LA+ G  +  V RN  +L ++  +++            Y F+ 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRY---------GYPFAT 51

Query: 126 DVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
             +   +  A++  +  LE     + VL+N  GI    A+    + +++W     VN  G
Sbjct: 52  YKLDVADSAAVDEVVQRLEREYGPIDVLVNVAGILRLGAI--DSLSDEDWQATFAVNTFG 109

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              V++AV   M RR+ GAIV +GS AA V
Sbjct: 110 VFNVSQAVSPRMKRRRSGAIVTVGSNAANV 139

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 76.9 bits (190), Expect = 3e-17
 Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 16/150 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +ITGA++GIG+A A +LA+ G  L+L +RN  +L  ++ E+        +         
Sbjct: 4   VIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALV------VPT 57

Query: 126 DVVSAGN-IKAIEMAI---DGLEVGVLINNVGITYPKAMFFHEVDEKEWM-DIVRVNLEG 180
           DV  A    + IE A+    G++  +L+NN GIT      F E+ +      ++RVN  G
Sbjct: 58  DVSDAEACERLIEAAVARFGGID--ILVNNAGITMWSR--FDELTDLSVFERVMRVNYLG 113

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
               T A L  +    +G IV + S A + 
Sbjct: 114 AVYCTHAALPHLKAS-RGQIVVVSSLAGLT 142

Length = 263

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 76.7 bits (189), Expect = 5e-17
 Identities = 46/146 (31%), Positives = 81/146 (55%), Gaps = 10/146 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+ GA+ GIG A A +LA  G  + L +R   K E++ ++I+A+            F  
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEA------VAFPL 66

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV    ++K+ +  A + L E+ VL++  G TY   +  HE+  +++   V+++L G  R
Sbjct: 67  DVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKL--HEISTEQFESQVQIHLVGANR 124

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAI 209
           +  AVL GM+ R++G ++ +GS  A+
Sbjct: 125 LATAVLPGMIERRRGDLIFVGSDVAL 150

Length = 274

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 76.0 bits (187), Expect = 6e-17
 Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 14/150 (9%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA+ GIG+A A  LA  G  + + +R  ++LE +++E++AE    +  ++E D
Sbjct: 3   GKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAE--GGKALVLELD 60

Query: 123 FSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEV---DEKEWMDIVRVNL 178
            + +        A+E  ++ L  + +L+NN GI     M    V   D  +W  ++  NL
Sbjct: 61  VTDE---QQVDAAVERTVEALGRLDILVNNAGI-----MLLGPVEDADTTDWTRMIDTNL 112

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
            G    T A L   + R KG IVNI S A 
Sbjct: 113 LGLMYTTHAALPHHLLRNKGTIVNISSVAG 142

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 76.1 bits (188), Expect = 7e-17
 Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 8/139 (5%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           L+TGA+ GIG+A A  LA  G  L+LV RN  KLE ++  +    P  +   V  D +  
Sbjct: 9   LLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL--PYPG-RHRWVVADLTS- 64

Query: 127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTK 186
              AG    +  A +   + VLINN G+ +  A+   + D +    ++ +NL    ++T+
Sbjct: 65  --EAGREAVLARAREMGGINVLINNAGVNH-FALLEDQ-DPEAIERLLALNLTAPMQLTR 120

Query: 187 AVLTGMMRRKKGAIVNIGS 205
           A+L  +  +    +VN+GS
Sbjct: 121 ALLPLLRAQPSAMVVNVGS 139

Length = 263

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 76.0 bits (187), Expect = 7e-17
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 11/144 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA+ GIG A A  L QHG+ ++  +R  +K+E ++ E Q+    T          C
Sbjct: 9   ALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPY-----QC 63

Query: 126 DVVSAGNIKAIEMAIDGLE--VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+ +   I ++  AI      V V INN G+  P+         + W ++  VN+   + 
Sbjct: 64  DLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPE--PLLSGKTEGWKEMFDVNVLALSI 121

Query: 184 VTKAVLTGMMRRK--KGAIVNIGS 205
            T+     M  R    G I+NI S
Sbjct: 122 CTREAYQSMKERNVDDGHIININS 145

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 75.6 bits (186), Expect = 1e-16
 Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 15/149 (10%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  ALITG T GIG+A A    + G  + +    +N  E  + E++ +   T        
Sbjct: 7   GKVALITGGTRGIGRAIAEAFLREGAKVAV---LYNSAENEAKELREKGVFT-------- 55

Query: 123 FSCDVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
             CDV +   +K  +  ++     V VL+NN GI Y   M F E DE+++  ++++NL G
Sbjct: 56  IKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMY--LMPFEEFDEEKYNKMIKINLNG 113

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
               T   L  +   K GAIVNI S A I
Sbjct: 114 AIYTTYEFLPLLKLSKNGAIVNIASNAGI 142

Length = 255

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 75.1 bits (185), Expect = 2e-16
 Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 10/142 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIG A A  LA  G N+++        E  +        +     V Y    
Sbjct: 4   ALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGS-----VIY-LPA 57

Query: 126 DVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV     I   I  A      + +L+NN GI +   +   E   ++W  I+ V L     
Sbjct: 58  DVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPI--EEFPPEDWDRIIAVMLTSAFH 115

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
             +A L  M ++  G I+NI S
Sbjct: 116 TIRAALPHMKKQGWGRIINIAS 137

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 74.6 bits (183), Expect = 2e-16
 Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 10/147 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TG   GIG A   + A+ G  + +   N    EK++ +I+A+  N Q       F+C
Sbjct: 6   AIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQA------FAC 59

Query: 126 DVVS-AGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+        A+  A   L  V VL+NN G  + K   F + +   W  ++ +NL G   
Sbjct: 60  DITDRDSVDTAVAAAEQALGPVDVLVNNAG--WDKFGPFTKTEPPLWERLIAINLTGALH 117

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +  AVL GM+ R  G IVNI S AA V
Sbjct: 118 MHHAVLPGMVERGAGRIVNIASDAARV 144

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 74.0 bits (182), Expect = 4e-16
 Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 5/140 (3%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIG A A +L   G  +I    + N   K   E      + Q+ + E D   
Sbjct: 5   ALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTED-QVRLKELDV-T 62

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           D        A     +G  V +L+NN GIT      F  +  +EW D++  NL     VT
Sbjct: 63  DTEECAEALAEIEEEEG-PVDILVNNAGITRDSV--FKRMSHQEWNDVINTNLNSVFNVT 119

Query: 186 KAVLTGMMRRKKGAIVNIGS 205
           + +   M  +  G I+NI S
Sbjct: 120 QPLFAAMCEQGYGRIINISS 139

Length = 245

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 75.8 bits (187), Expect = 4e-16
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 22/148 (14%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           LITGA+ GIG+A A ++A+ G  + LV+RN   L+++  EI+A+            ++CD
Sbjct: 375 LITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHA------YTCD 428

Query: 127 V--VSAGN--IKAIEMAIDGLEVGVLINNVGITYPKAMF-----FHEVDEKEWMDIVRVN 177
           +   +A +  +K I        V  L+NN G +  +++      FH  D +  M    VN
Sbjct: 429 LTDSAAVDHTVKDILAEHGH--VDYLVNNAGRSIRRSVENSTDRFH--DYERTMA---VN 481

Query: 178 LEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
             G  R+   +L  M  R+ G +VN+ S
Sbjct: 482 YFGAVRLILGLLPHMRERRFGHVVNVSS 509

Length = 657

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 73.9 bits (182), Expect = 5e-16
 Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 12/146 (8%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  ALITGA+ GIG A A   A+ G  ++    N    E +   + A        I  + 
Sbjct: 10  GKIALITGASYGIGFAIAKAYAKAGATIVF---NDINQELVDKGLAAYREL---GIEAHG 63

Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGV---LINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
           + CDV     ++A+   I+  EVGV   L+NN GI     M   E+  +++  ++ ++L 
Sbjct: 64  YVCDVTDEDGVQAMVSQIEK-EVGVIDILVNNAGIIKRIPM--LEMSAEDFRQVIDIDLN 120

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGS 205
               V+KAV+  M+++  G I+NI S
Sbjct: 121 APFIVSKAVIPSMIKKGHGKIINICS 146

Length = 265

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 73.1 bits (180), Expect = 6e-16
 Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 15/149 (10%)

Query: 67  LITGATDGIGKAFAHQLAQ--HGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           ++TGA+ GIG+A A +L +      ++L++R+   L+++  E++   P  ++  V     
Sbjct: 3   ILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELR---PGLRVTTV----K 55

Query: 125 CDVVSAGNIKAIEMAIDGL--EVGVLINNVGITYP-KAMFFHEVDEKEWMDIVRVNLEGT 181
            D+  A  ++ +  AI  L  E  +LINN G   P   + F   D  E      +NL   
Sbjct: 56  ADLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFI--DLDELQKYFDLNLTSP 113

Query: 182 TRVTKAVL-TGMMRRKKGAIVNIGSGAAI 209
             +T  +L     R  K  +VN+ SGAA+
Sbjct: 114 VCLTSTLLRAFKKRGLKKTVVNVSSGAAV 142

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 73.2 bits (180), Expect = 6e-16
 Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 7/141 (4%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TG   GIG A   +LA+ G  +      N  + E    E  A        +VE D S
Sbjct: 3   ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGA--LGFDFRVVEGDVS 60

Query: 125 CDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
                   +  +E  +    + VL+NN GIT      F ++  ++W  ++  NL     V
Sbjct: 61  SFESCKAAVAKVEAELG--PIDVLVNNAGITRDA--TFKKMTYEQWSAVIDTNLNSVFNV 116

Query: 185 TKAVLTGMMRRKKGAIVNIGS 205
           T+ V+ GM  R  G I+NI S
Sbjct: 117 TQPVIDGMRERGWGRIINISS 137

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 71.4 bits (176), Expect = 7e-16
 Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 17/151 (11%)

Query: 65  WALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNK--LEKISNEIQAENPNTQINIVEY 121
             LITG T G+G A A  LA  G  +L+LVSR        ++  E++A      +     
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTV----- 56

Query: 122 DFSCDVVSAGNIKAI--EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
             +CDV     + A+   +      +  +++N G+         E+  + +  ++   + 
Sbjct: 57  -AACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGP--LEELTPERFERVLAPKVT 113

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           G   + +           GA V   S A ++
Sbjct: 114 GAWNLHELTR----DLDLGAFVLFSSVAGVL 140

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 72.3 bits (178), Expect = 1e-15
 Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 14/146 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TGA  GIG     QLA+ G   +IL +R+  + +    +++AE  + + + +     
Sbjct: 3   ALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQL----- 57

Query: 125 CDVVSAGNIKA----IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
            DV    +I+A    +E    GL+  +L+NN GI + K         ++  + ++ N  G
Sbjct: 58  -DVTDDASIEAAADFVEEKYGGLD--ILVNNAGIAF-KGFDDSTPTREQARETMKTNFFG 113

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSG 206
           T  VT+A+L  + +   G IVN+ SG
Sbjct: 114 TVDVTQALLPLLKKSPAGRIVNVSSG 139

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 72.7 bits (179), Expect = 1e-15
 Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 8/144 (5%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  G+G AFA  LA+ G  +        +  +++  ++A     + + +  D + 
Sbjct: 10  ALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAG--GRAHAIAADLA- 66

Query: 126 DVVSAGNI-KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
           D  S      A   A+ GL+   L+NN GIT  K+    E+D   W  ++ VN+ GT  +
Sbjct: 67  DPASVQRFFDAAAAALGGLDG--LVNNAGITNSKSA--TELDIDTWDAVMNVNVRGTFLM 122

Query: 185 TKAVLTGMMRRKKGAIVNIGSGAA 208
            +A L  +    +G IVN+ S  A
Sbjct: 123 LRAALPHLRDSGRGRIVNLASDTA 146

Length = 250

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 73.1 bits (180), Expect = 1e-15
 Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 7/141 (4%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA+ G G     +LA+ G  +I   RN  K E + ++    N    I +       
Sbjct: 6   AIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKV----QQL 61

Query: 126 DVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
           DV    +I   ++ +  +  + +L+NN G       F  E+  +E+      N+ G   V
Sbjct: 62  DVTDQNSIHNFQLVLKEIGRIDLLVNNAGYAN--GGFVEEIPVEEYRKQFETNVFGAISV 119

Query: 185 TKAVLTGMMRRKKGAIVNIGS 205
           T+AVL  M ++K G I+NI S
Sbjct: 120 TQAVLPYMRKQKSGKIINISS 140

Length = 280

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 72.6 bits (179), Expect = 1e-15
 Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 25/153 (16%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G    +TGA  GIG A A    + G  +I   +     E                  +Y 
Sbjct: 8   GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQE------------------DYP 49

Query: 123 FSCDVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVN 177
           F+  V+   +  A+      L      + VL+N  GI    A     + +++W     VN
Sbjct: 50  FATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGA--TDSLSDEDWQQTFAVN 107

Query: 178 LEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             G   + +AV+    R++ GAIV +GS AA V
Sbjct: 108 AGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV 140

Length = 252

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 71.6 bits (176), Expect = 2e-15
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 10/142 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA+ GIG   A  LA+ G  + L  RN   L  +S           +  V YD   
Sbjct: 3   ALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGG------DVEAVPYDARD 56

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
              +   + A+      ++  VL++N GI  P      E  + E      +N+     +T
Sbjct: 57  PEDARALVDALRDRFGRID--VLVHNAGIGRPTT--LREGSDAELEAHFSINVIAPAELT 112

Query: 186 KAVLTGMMRRKKGAIVNIGSGA 207
           +A+L  +     G +V + S +
Sbjct: 113 RALLPALREAGSGRVVFLNSLS 134

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 72.1 bits (177), Expect = 2e-15
 Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 16/148 (10%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TG++ GIG A A  LAQ G  +IL  R+  KL   +  ++ +  +         
Sbjct: 10  GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAF--- 66

Query: 123 FSCDVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVN 177
              DV       A+  AID  E     + +L+NN G+ +   +   +     +  ++R N
Sbjct: 67  ---DVTDH---DAVRAAIDAFEAEIGPIDILVNNAGMQFRTPL--EDFPADAFERLLRTN 118

Query: 178 LEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
           +     V +AV   M+ R  G I+NI S
Sbjct: 119 ISSVFYVGQAVARHMIARGAGKIINIAS 146

Length = 255

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 71.8 bits (177), Expect = 2e-15
 Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 14/145 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A ITG   GIGKA A   A+ G ++ +  R    LE  + EI +           +   C
Sbjct: 6   AFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGG-----RAHPIQC 60

Query: 126 DVVSAGNIK-AIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV     ++ A++  +   E G   +LINN    +        +    +  ++ ++L GT
Sbjct: 61  DVRDPEAVEAAVDETLK--EFGKIDILINNAAGNFLAP--AESLSPNGFKTVIDIDLNGT 116

Query: 182 TRVTKAVLTGMMRRKKGA-IVNIGS 205
              TKAV   ++  K G  I+NI +
Sbjct: 117 FNTTKAVGKRLIEAKHGGSILNISA 141

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 71.7 bits (176), Expect = 3e-15
 Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 10/145 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA  G G+  A + AQ G  +++   N +  E+++ +I       Q ++ +     
Sbjct: 8   AIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADVTKRADVE 67

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITY-PKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
            +V A    A+        + +L+NN GIT+  K M   EVDE+E+  +  VN++     
Sbjct: 68  AMVEA----ALS---KFGRLDILVNNAGITHRNKPML--EVDEEEFDRVFAVNVKSIYLS 118

Query: 185 TKAVLTGMMRRKKGAIVNIGSGAAI 209
            +A++  M  +  G I+NI S A +
Sbjct: 119 AQALVPHMEEQGGGVIINIASTAGL 143

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 71.7 bits (176), Expect = 3e-15
 Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 17/150 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA  GIG+A A   A+ G  +++  R+    E+++  I A                
Sbjct: 8   AIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG----------RAFA 57

Query: 126 DVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
                G+ +A+E  +D +      + VL+NN G  +         DE +W  ++RVN+ G
Sbjct: 58  RQGDVGSAEAVEALVDFVAARWGRLDVLVNNAG--FGCGGTVVTTDEADWDAVMRVNVGG 115

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
                K  +  M R+  G+IVN  S  A+ 
Sbjct: 116 VFLWAKYAIPIMQRQGGGSIVNTASQLALA 145

Length = 252

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 70.9 bits (174), Expect = 5e-15
 Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 24/150 (16%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           L+TGAT G G+    +  Q G  +I   R   +L+++ +E+        + I + D    
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGD-----NLYIAQLDVR-- 56

Query: 127 VVSAGNIKAIEMAIDGL-----EVGVLINNVGITY---PKAMFFHEVDEKEWMDIVRVNL 178
                N  AIE  +  L      + VL+NN G+     P     H+   ++W  ++  N 
Sbjct: 57  -----NRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPA----HKASVEDWETMIDTNN 107

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
           +G   +T+AVL GM+ R  G I+NIGS A 
Sbjct: 108 KGLVYMTRAVLPGMVERNHGHIINIGSTAG 137

Length = 248

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 70.9 bits (174), Expect = 6e-15
 Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 20/159 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITG T  +G A A  LAQ G  +  + RN  K +K++ EI A      I +     + 
Sbjct: 8   AVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITA-LGGRAIAL-----AA 61

Query: 126 DVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMF------------FHEVDEKEWM 171
           DV+   +++     I      V +LIN  G  +P A              F ++DE+ W 
Sbjct: 62  DVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWE 121

Query: 172 DIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            +  +NL G+   ++     M+ +K G+I+NI S  A  
Sbjct: 122 FVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFS 160

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 70.4 bits (173), Expect = 8e-15
 Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 20/154 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL---------VSRNHNKLEKISNEIQAENPNTQI 116
            L+TGA  G+G+A+A   A+ G  +++           ++ +  +K+ +EI+A       
Sbjct: 8   VLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGKA-- 65

Query: 117 NIVEYDFSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVR 175
            +  YD    V     I  ++ AID    V +L+NN GI   ++  F ++ E++W  ++R
Sbjct: 66  -VANYD---SVEDGEKI--VKTAIDAFGRVDILVNNAGILRDRS--FAKMSEEDWDLVMR 117

Query: 176 VNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
           V+L+G+ +VT+A    M ++K G I+N  S A +
Sbjct: 118 VHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGL 151

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 69.9 bits (171), Expect = 9e-15
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 12/144 (8%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAE-NPNTQINIVEYDFS- 124
           L+TGA+DGIG+  A   A++G  +IL+ RN  KL ++++ I  E     Q  I++     
Sbjct: 8   LVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLTCT 67

Query: 125 ---CDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
              C  + A  I      +DG     +++N G+         E + + W D+ +VN+  T
Sbjct: 68  SENCQQL-AQRIAVNYPRLDG-----VLHNAGLLGDV-CPLSEQNPQVWQDVXQVNVNAT 120

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
             +T+A+L  +++   G++V   S
Sbjct: 121 FMLTQALLPLLLKSDAGSLVFTSS 144

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 70.2 bits (172), Expect = 9e-15
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 64  SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDF 123
             AL+TGA  GIG+A A +    G  ++ +  +   L   ++ +                
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVA------- 55

Query: 124 SCDVVSAGNIKA--IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
            CD+  A ++ A     A +   V VL+ N G    +A   H+     W     +NLE  
Sbjct: 56  -CDLTDAASLAAALANAAAERGPVDVLVANAGAA--RAASLHDTTPASWRADNALNLEAA 112

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
               +AVL GM++R +GA+VNIGS
Sbjct: 113 YLCVEAVLEGMLKRSRGAVVNIGS 136

Length = 257

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 70.3 bits (173), Expect = 1e-14
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 25/161 (15%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITG    +G A A +LA+ G  + ++ RN  K E +  EI+A      + +       
Sbjct: 13  AVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAG-GEALAV-----KA 66

Query: 126 DVVSAGNIKAIEMAIDGLE----VGVLINNVGITYPKAMF-------------FHEVDEK 168
           DV+   +++     I  LE      +LIN  G  +PKA               F ++DE+
Sbjct: 67  DVLDKESLEQARQQI--LEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEE 124

Query: 169 EWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
            +  +  +NL GT   T+     M+ RK G I+NI S  A 
Sbjct: 125 GFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF 165

Length = 278

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 69.4 bits (170), Expect = 2e-14
 Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 16/149 (10%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G   L+TGA+ GIG+A A  LAQ G  ++  +RN   L++++ E   E        +  D
Sbjct: 9   GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCE-------PLRLD 61

Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
              D  +     A   A DG     L+N  GI   ++    ++  + +  ++ VN  G  
Sbjct: 62  VGDD-AAIRAALAAAGAFDG-----LVNCAGIASLESAL--DMTAEGFDRVMAVNARGAA 113

Query: 183 RVTKAVLTGMMR-RKKGAIVNIGSGAAIV 210
            V + V   M+   + G+IVN+ S AA+V
Sbjct: 114 LVARHVARAMIAAGRGGSIVNVSSQAALV 142

Length = 245

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 69.4 bits (170), Expect = 2e-14
 Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 13/148 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA  GIG+A+A  LA+ G ++++   N    E+++ +I A+             + 
Sbjct: 9   AIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTA--------IAV 60

Query: 126 DVVSAGNIKAIEMAIDGLE----VGVLINNVGI-TYPKAMFFHEVDEKEWMDIVRVNLEG 180
            V  +    A  MA   +     +  L+NN  I    K      V    +   + VNL+G
Sbjct: 61  QVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDG 120

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
               T+AV   M +R  GAIVN  S AA
Sbjct: 121 ALVCTRAVYKHMAKRGGGAIVNQSSTAA 148

Length = 250

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 69.1 bits (170), Expect = 3e-14
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 22/145 (15%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN-PNTQINIVEYDFSC 125
           L+TGA DGIG+  A   A+HG  +IL+ R   KLE + +EI+A   P   I         
Sbjct: 16  LVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAI------IPL 69

Query: 126 DVVSAGNIKAIEMA---------IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRV 176
           D+++A      ++A         +DG     +++N G+           D + W D+++V
Sbjct: 70  DLLTATPQNYQQLADTIEEQFGRLDG-----VLHNAGLLGELGPMEQ-QDPEVWQDVMQV 123

Query: 177 NLEGTTRVTKAVLTGMMRRKKGAIV 201
           N+  T  +T+A+L  +++    ++V
Sbjct: 124 NVNATFMLTQALLPLLLKSPAASLV 148

Length = 247

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 68.8 bits (168), Expect = 3e-14
 Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 13/150 (8%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA+ GIG+  A  L   G  + L      KLE ++ E+       ++ I    
Sbjct: 6   GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKI---- 56

Query: 123 FSCDVVSAGNIKAI-EMAIDGLE-VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           F  ++     +KA+ + A   LE V +L+NN GIT    +F    DE +W  ++ VNL  
Sbjct: 57  FPANLSDRDEVKALGQKAEADLEGVDILVNNAGIT-KDGLFVRMSDE-DWDSVLEVNLTA 114

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           T R+T+ +   MMRR+ G I+NI S   + 
Sbjct: 115 TFRLTRELTHPMMRRRYGRIINITSVVGVT 144

Length = 245

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 69.0 bits (169), Expect = 3e-14
 Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI-QAENPNTQINIVEYDFS 124
           A+ITG++ GIG   A   A+ G  L L  R+  +LE+      QA     +I +V  D +
Sbjct: 6   AIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVADLT 65

Query: 125 CDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
            +    G  + I   +     + +L+NN GI         + D +E+  ++ +NL     
Sbjct: 66  EE---EGQDRIISTTLAKFGRLDILVNNAGILAKGG--GEDQDIEEYDKVMNLNLRAVIY 120

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAI 209
           +TK  +  ++ + KG IVN+ S A  
Sbjct: 121 LTKLAVPHLI-KTKGEIVNVSSVAGG 145

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 70.3 bits (173), Expect = 3e-14
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 18/151 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIGKA A +LA  G  ++L   +    E  + E+   +    +       +C
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGV-------AC 477

Query: 126 DVVSAGNIK-AIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV     ++ A E A   L  G   ++++N GI         E  +++W     VN  G 
Sbjct: 478 DVTDEAAVQAAFEEAA--LAFGGVDIVVSNAGIAISGP--IEETSDEDWRRSFDVNATGH 533

Query: 182 TRVTKAVLTGMMRRKK--GAIVNIGSGAAIV 210
             V +     +M+ +   G+IV I S  A+ 
Sbjct: 534 FLVAREA-VRIMKAQGLGGSIVFIASKNAVN 563

Length = 681

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 68.9 bits (169), Expect = 3e-14
 Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 15/157 (9%)

Query: 57  KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQI 116
                 G  A++TG   GIG A A   A  G  + L+ R+    E ++            
Sbjct: 9   LAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS----EDVAEVAAQLLGGNAK 64

Query: 117 NIVEYDFSCDVVSAGNI-KAIEMAIDGL-EVGVLINNVGITY-PKAMFFHEVDEKEWMDI 173
            +V     CDV  + ++  A+   I     + +L+N+ G+     A    +V E++W   
Sbjct: 65  GLV-----CDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAE---DVSEEDWDKT 116

Query: 174 VRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           + +NL+G+  + +AV   M+    G IVN+ S A +V
Sbjct: 117 IDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVV 153

Length = 255

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 68.4 bits (168), Expect = 5e-14
 Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 10/142 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIG   A  LA+ G  +++   N       +  +Q               + 
Sbjct: 7   ALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGK-----AIG-VAM 60

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV     I A I+ A++    V +L+NN GI +   +   +   ++W  ++ + L+G   
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPI--EDFPTEKWKKMIAIMLDGAFL 118

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
            TKA L  M  +  G I+N+ S
Sbjct: 119 TTKAALPIMKAQGGGRIINMAS 140

Length = 258

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 68.2 bits (167), Expect = 5e-14
 Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 6/149 (4%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEY 121
           G  AL+TG+T GIG   A  LA  G N++L    +  ++E +   + A++    +     
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYH-GA 60

Query: 122 DFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           D S        +   +    G++  +L+NN GI +   +   +   ++W  I+ +NL   
Sbjct: 61  DLSKPAAIEDMVAYAQRQFGGVD--ILVNNAGIQHVAPI--EDFPTEKWDAIIALNLSAV 116

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              T+  L  M ++  G I+NI S   +V
Sbjct: 117 FHTTRLALPHMKKQGWGRIINIASVHGLV 145

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 68.2 bits (167), Expect = 7e-14
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 22/161 (13%)

Query: 53  LRQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENP 112
            RQP +L   G   L+TGA+ GIG+A A Q A+ G  ++ V+R  + L+ +++ I     
Sbjct: 32  PRQPVDLT--GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGG 89

Query: 113 NTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVG---VLINNVG--ITYPKAMFFHEVDE 167
           +           CD+     + A+   ++   +G   +LINN G  I  P A     +D 
Sbjct: 90  DAMA------VPCDLSDLDAVDALVADVEK-RIGGVDILINNAGRSIRRPLA---ESLD- 138

Query: 168 KEWMDIVR---VNLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
             W D+ R   +N     R+ + +  GM+ R  G I+N+ +
Sbjct: 139 -RWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVAT 178

Length = 293

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 67.8 bits (166), Expect = 8e-14
 Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 28/160 (17%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISN------------EIQAE 110
           G  A +TGA+ GIG+A A +LA+ G  +++ ++  ++ +  S             EI+A 
Sbjct: 3   GKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAA 62

Query: 111 NPNTQINIVEYDFSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDE- 167
                + IV      DV     ++A +E  +D    + +L+NN G     A++   V++ 
Sbjct: 63  G-GQALPIV-----VDVRDEDQVRALVEATVDQFGRLDILVNNAG-----AIWLSLVEDT 111

Query: 168 --KEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
             K +  + RVNL GT  +++A L  M++  +G I+NI  
Sbjct: 112 PAKRFDLMQRVNLRGTYLLSQAALPHMVKAGQGHILNISP 151

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 18/149 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +ITGA+ G+G+A A   A+ G  ++L++R    LE ++ EI+A      + +V      
Sbjct: 11  VVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAG-GEALAVV-----A 64

Query: 126 DVVSAGNIKAI-EMAIDGLEVG---VLINNVGITYPKAMF--FHEVDEKEWMDIVRVNLE 179
           DV  A  ++A  + A +  E+G     +NN  +T    +F  F +V  +E+  +  V   
Sbjct: 65  DVADAEAVQAAADRAEE--ELGPIDTWVNNAMVT----VFGPFEDVTPEEFRRVTEVTYL 118

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
           G    T A L  M  R +GAI+ +GS  A
Sbjct: 119 GVVHGTLAALRHMRPRDRGAIIQVGSALA 147

Length = 334

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 66.2 bits (162), Expect = 3e-13
 Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 16/149 (10%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  ALITG + GIG A A  L   G  + + +R+  +LE+ + E+   N    +  +   
Sbjct: 6   GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAEL---NNKGNVLGLA-- 60

Query: 123 FSCDVVSAGN----IKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
              DV    +    + AI  A  GL+  VLI N G+ +   +   E+  +EW  ++  NL
Sbjct: 61  --ADVRDEADVQRAVDAIVAAFGGLD--VLIANAGVGHFAPV--EELTPEEWRLVIDTNL 114

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGA 207
            G     KA +   ++R  G I+NI S A
Sbjct: 115 TGAFYTIKAAVPA-LKRGGGYIINISSLA 142

Length = 237

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 65.6 bits (160), Expect = 3e-13
 Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 17/146 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA+ GIG+A A  L   G  + + +R+  +L         E             + 
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAA---AAQELEGV------LGLAG 53

Query: 126 DVVSAGNIK----AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV    +++    A+E A  GL+   L+NN G+   K +   E+  +EW  ++  NL G 
Sbjct: 54  DVRDEADVRRAVDAMEEAFGGLD--ALVNNAGVGVMKPV--EELTPEEWRLVLDTNLTGA 109

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGA 207
                     ++RR  G IVN+GS A
Sbjct: 110 FYCIHKAAPALLRRGGGTIVNVGSLA 135

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 66.1 bits (162), Expect = 3e-13
 Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 11/148 (7%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TG + G+G   A  L + G  ++L +R   +LE+ +  ++A      + I    
Sbjct: 12  GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEA------LGIDALW 65

Query: 123 FSCDVVSAGNIKAI-EMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
            + DV    +I+ + E  ++    V +L+NN G T+      H V+   W  ++ +N+ G
Sbjct: 66  IAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVE--AWDKVMNLNVRG 123

Query: 181 TTRVTKAVLTGMM-RRKKGAIVNIGSGA 207
              +++AV    M  R  G I+N+ S A
Sbjct: 124 LFLLSQAVAKRSMIPRGYGRIINVASVA 151

Length = 259

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 6e-13
 Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 20/143 (13%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TGAT GIG A + +LA  G  +I ++R                 +   +     F+C
Sbjct: 6   VLVTGATKGIGLALSLRLANLGHQVIGIAR-----------------SAIDDFPGELFAC 48

Query: 126 DVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
           D+       A    I+ +  V  ++NNVGI  P+ +   ++D     D+  +N+    +V
Sbjct: 49  DLADIEQTAATLAQINEIHPVDAIVNNVGIALPQPL--GKIDLAALQDVYDLNVRAAVQV 106

Query: 185 TKAVLTGMMRRKKGAIVNIGSGA 207
           T+A L GM  R++G IVNI S A
Sbjct: 107 TQAFLEGMKLREQGRIVNICSRA 129

Length = 234

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 9e-13
 Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 13/148 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVS----RNHNKLEKISNEIQAENPNTQINIVEY 121
            LITG + G+G+A A +LA  G ++I++     R   + + ++  I+A     +   + +
Sbjct: 9   VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAG--GKALGLAF 66

Query: 122 DFSCDVVSA-GNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           D   D  +    + A       L++  L+NN GI    A  F E+  +EW D++ VNL+G
Sbjct: 67  DVR-DFAATRAALDAGVEEFGRLDI--LVNNAGIATDAA--FAELSIEEWDDVIDVNLDG 121

Query: 181 TTRVTKAVLTGMMR-RKKGAIVNIGSGA 207
              VT+A L  M+R R+ G IVNI S A
Sbjct: 122 FFNVTQAALPPMIRARRGGRIVNIASVA 149

Length = 249

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 64.9 bits (159), Expect = 9e-13
 Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 28/147 (19%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA+ GIG+A A +LA+ G  +   SRN               P   + ++E     
Sbjct: 7   ALVTGASSGIGRATAEKLARAGYRVFGTSRN----------PARAAPIPGVELLE----L 52

Query: 126 DVVSAGNIKA-----IEMA--IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
           DV    +++A     I  A  ID     VL+NN G+    A    E    +   +   N+
Sbjct: 53  DVTDDASVQAAVDEVIARAGRID-----VLVNNAGVGLAGAA--EESSIAQAQALFDTNV 105

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGS 205
            G  R+T+AVL  M  +  G I+NI S
Sbjct: 106 FGILRMTRAVLPHMRAQGSGRIINISS 132

Length = 270

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 63.9 bits (156), Expect = 1e-12
 Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 9/145 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQ-INIVEYDF 123
            LITGA+ GIG     QL   G N ++ + R+       + E+ A   +   ++I+E D 
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRD----PSAATELAALGASHSRLHILELDV 56

Query: 124 SCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           + ++  +   +A+   +    + VLINN GI         EVD ++ +++ +VN+ G   
Sbjct: 57  TDEIAES--AEAVAERLGDAGLDVLINNAGI-LHSYGPASEVDSEDLLEVFQVNVLGPLL 113

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAA 208
           +T+A L  +++  +  I+NI S   
Sbjct: 114 LTQAFLPLLLKGARAKIINISSRVG 138

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 64.0 bits (156), Expect = 2e-12
 Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 21/151 (13%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNE--IQAENPNTQINIVE 120
           G  ALIT A  GIG+A A   A+ G N+I    N  KL+++     I             
Sbjct: 2   GKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELERGPGITTR---------- 51

Query: 121 YDFSCDVVSAGNIKAIEMAIDGLE-VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
                 V+   + + +         + VL N  G  +  ++   + ++ +W   + +N+ 
Sbjct: 52  ------VLDVTDKEQVAALAKEEGRIDVLFNCAGFVHHGSIL--DCEDDDWDFAMNLNVR 103

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
               + KAVL  M+ RK G+I+N+ S A+ +
Sbjct: 104 SMYLMIKAVLPKMLARKDGSIINMSSVASSI 134

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 64.1 bits (156), Expect = 2e-12
 Identities = 50/144 (34%), Positives = 71/144 (49%), Gaps = 9/144 (6%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPN-TQINIVEY 121
           G  ALITGA  GIG+  A   A+HG NLIL+  +  ++EK+++E+       T +     
Sbjct: 6   GKTALITGALQGIGEGIARVFARHGANLILLDIS-PEIEKLADELCGRGHRCTAVVADVR 64

Query: 122 DFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           D +    +    K  E  ID     +L+NN G+      F    DE     I  +N++G 
Sbjct: 65  DPASVAAAIKRAKEKEGRID-----ILVNNAGVCR-LGSFLDMSDEDRDFHI-DINIKGV 117

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
             VTKAVL  M+ RK G IV + S
Sbjct: 118 WNVTKAVLPEMIARKDGRIVMMSS 141

Length = 263

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 27/148 (18%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           LITG + G G+A A      G  ++   R+         + +A +P+  +  +      D
Sbjct: 8   LITGVSSGFGRALAQAALAAGHRVVGTVRSEAARA----DFEALHPDRALARL-----LD 58

Query: 127 VVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVR----VN 177
           V       AI+  +   E     + VL+NN G  +  A+   E    E    +R    VN
Sbjct: 59  VTDFD---AIDAVVADAEATFGPIDVLVNNAGYGHEGAI--EESPLAE----MRRQFEVN 109

Query: 178 LEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
           + G   +TKAVL GM  R++G IVNI S
Sbjct: 110 VFGAVAMTKAVLPGMRARRRGHIVNITS 137

Length = 277

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 64.0 bits (156), Expect = 2e-12
 Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 20/158 (12%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA+ G+G  FA  LAQ G  ++L SR   +L+++  EI+AE     +      
Sbjct: 9   GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHV------ 62

Query: 123 FSCDVVSAGNIKAIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
            S DV    +IKA  +A    E G   +L+NN G++  + +   +V   ++  +   N  
Sbjct: 63  VSLDVTDYQSIKA-AVAHAETEAGTIDILVNNSGVSTTQKLV--DVTPADFDFVFDTNTR 119

Query: 180 GTTRVTKAVLTGMMRRKKGA--------IVNIGSGAAI 209
           G   V + V   M+ R KGA        I+NI S A +
Sbjct: 120 GAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGL 157

Length = 258

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 64.9 bits (158), Expect = 2e-12
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 18/151 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TGA  GIG+A   + A+ G  +++  RN  +  +     +A++     + +  D S 
Sbjct: 8   VLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARE-----RADSLGPDHHALAMDVSD 62

Query: 126 DVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           +         I    + L      + VL+NN G+T P      +   +E+  +  +NL G
Sbjct: 63  E-------AQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTG 115

Query: 181 TTRVTKAVLTGMMRRKKG-AIVNIGSGAAIV 210
              V +  L  M+ +  G AIVN+ SGA +V
Sbjct: 116 AYLVAREALRLMIEQGHGAAIVNVASGAGLV 146

Length = 520

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 63.6 bits (155), Expect = 2e-12
 Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 17/145 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TGA  GIG+A A  L Q G  +I +      L +  + ++                 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRL-------------TPL 47

Query: 126 DVVSAGNIKAI--EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV  A  ++ +   +  +   +  L+N  G+  P A     +  ++W     VN+ G   
Sbjct: 48  DVADAAAVREVCSRLLAEHGPIDALVNCAGVLRPGA--TDPLSTEDWEQTFAVNVTGVFN 105

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAA 208
           + +AV   M  R+ GAIV + S AA
Sbjct: 106 LLQAVAPHMKDRRTGAIVTVASNAA 130

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 63.1 bits (154), Expect = 3e-12
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 18/150 (12%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           +ITG   G+G+A A  LAQ G  L L+  N  KLE+   E  A     +       ++ +
Sbjct: 9   VITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRG------YAAN 62

Query: 127 VVSAGNIKAI--EMAIDGLEVGVLINNVGITYPKAMFF----HEVDEK----EWMDIVRV 176
           V    +++A   ++A D  ++  LINN GI     +       +V  K    ++  ++ V
Sbjct: 63  VTDEEDVEATFAQIAEDFGQLNGLINNAGILR-DGLLVKAKDGKVTSKMSLEQFQSVIDV 121

Query: 177 NLEGTTRVTKAVLTGMMR-RKKGAIVNIGS 205
           NL G     +     M+    KG I+NI S
Sbjct: 122 NLTGVFLCGREAAAKMIESGSKGVIINISS 151

Length = 253

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 63.3 bits (154), Expect = 4e-12
 Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 8/146 (5%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G   ++TGA  GIG+  A +LA  G  ++LV R+    E +  EI A       ++   D
Sbjct: 4   GKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHE-VLAEILAAG--DAAHVHTAD 60

Query: 123 FSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
                  AG    +  A++    V VLINNVG T   A  +   +E++    +R +L  T
Sbjct: 61  LE---TYAGAQGVVRAAVERFGRVDVLINNVGGTI-WAKPYEHYEEEQIEAEIRRSLFPT 116

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGA 207
               +AVL  M+ R++G IVN+ S A
Sbjct: 117 LWCCRAVLPHMLERQQGVIVNVSSIA 142

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 62.9 bits (153), Expect = 4e-12
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 25/144 (17%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRN---HNKLEKISNEIQAENPNTQINIVEYD 122
           A++TG + GIGKA  ++L + G N+I        +N ++    ++   N    I  ++Y 
Sbjct: 9   AIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDYF--KVDVSNKEQVIKGIDYV 66

Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGI-TYPKAMFFHEVDEKEWMDIVRVNLEGT 181
            S      G I             +L+NN GI +Y      H V+E EW  I+ VN+ G 
Sbjct: 67  IS----KYGRID------------ILVNNAGIESYGA---IHAVEEDEWDRIINVNVNGI 107

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
             ++K  +  M+++ KG I+NI S
Sbjct: 108 FLMSKYTIPYMLKQDKGVIINIAS 131

Length = 258

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 63.2 bits (154), Expect = 4e-12
 Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 12/148 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TG   GIG+A A   A+ G  + +   +   L        A  P  ++         
Sbjct: 14  VLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAAL----AATAARLPGAKVTATV----A 65

Query: 126 DVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV     ++   + A++    + VL+NN GI  P      E+  ++W   + VNL G   
Sbjct: 66  DVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGI-DEITPEQWEQTLAVNLNGQFY 124

Query: 184 VTKAVLTGMMRRKKG-AIVNIGSGAAIV 210
             +A +  +     G  I+ + S A  +
Sbjct: 125 FARAAVPLLKASGHGGVIIALSSVAGRL 152

Length = 264

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 62.8 bits (153), Expect = 4e-12
 Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 9/145 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TG   G+G A A  L   G  ++L      + +  + E+              D + 
Sbjct: 8   AIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAEL-----GDAARFFHLDVTD 62

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           +      +     A   L+V  L+NN GI     +       +EW  ++ +NL G    T
Sbjct: 63  EDGWTAVVDTAREAFGRLDV--LVNNAGILTGGTV--ETTTLEEWRRLLDINLTGVFLGT 118

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAIV 210
           +AV+  M     G+I+N+ S   +V
Sbjct: 119 RAVIPPMKEAGGGSIINMSSIEGLV 143

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 62.9 bits (153), Expect = 5e-12
 Identities = 45/146 (30%), Positives = 63/146 (43%), Gaps = 9/146 (6%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           LITG   G+G A A +LA+ G  L LV  N   LE     +    P+ ++ +++ D S +
Sbjct: 7   LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66

Query: 127 V-VSAGNIKAIEM--AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
             V A     +E    IDG       NN GI   K     +    E+  +V +NL G   
Sbjct: 67  AQVEAYVDATVEQFGRIDG-----FFNNAGIE-GKQNLTEDFGADEFDKVVSINLRGVFY 120

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAI 209
             + VL  M  +  G IVN  S   I
Sbjct: 121 GLEKVLKVMREQGSGMIVNTASVGGI 146

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 62.3 bits (152), Expect = 6e-12
 Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 8/144 (5%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITGA+ GIG+A A + A+ G N+ L +R  ++L+++  E+   NPN  + +   D + 
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELL--NPNPSVEVEILDVTD 58

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYP-KAMFFHEVDEKEWMDIVRVNLEGTTRV 184
           +  +   I  +E  + GL++ ++   VG       + F    E      +  NL G   +
Sbjct: 59  EERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRE-----TIDTNLLGAAAI 113

Query: 185 TKAVLTGMMRRKKGAIVNIGSGAA 208
            +A L     + +G +V I S AA
Sbjct: 114 LEAALPQFRAKGRGHLVLISSVAA 137

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 62.4 bits (152), Expect = 6e-12
 Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 10/150 (6%)

Query: 59  LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINI 118
           L   G   LITGA+ GIG A A   A  G +L LV+R+ + LE ++ +++A +    + +
Sbjct: 3   LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG-VDVAV 61

Query: 119 VEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
                + D+ S    +  ++A +  ++ +L+NN G          +VD+  W     + +
Sbjct: 62  ----HALDLSSPEARE--QLAAEAGDIDILVNNAGAI--PGGGLDDVDDAAWRAGWELKV 113

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVN-IGSGA 207
            G   +T+     M  R  G IVN IG+  
Sbjct: 114 FGYIDLTRLAYPRMKARGSGVIVNVIGAAG 143

Length = 259

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 62.0 bits (151), Expect = 8e-12
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 17/151 (11%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEY 121
               L+TGA  GIGKAF   L  HG   +  + R+          + A+  + ++  +  
Sbjct: 3   DKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAA----HLVAKYGD-KVVPLR- 56

Query: 122 DFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDE--KEWMDIVRVNLE 179
               DV    +IKA        +V V+INN G+  P  +      E  K+ MD   VN+ 
Sbjct: 57  ---LDVTDPESIKAAAAQAK--DVDVVINNAGVLKPATLLEEGALEALKQEMD---VNVF 108

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           G  R+ +A    +     GAIVN+ S A++ 
Sbjct: 109 GLLRLAQAFAPVLKANGGGAIVNLNSVASLK 139

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 61.9 bits (151), Expect = 9e-12
 Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 19/149 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TGA+ GIG+A A +LA+ G ++++  + +    E++  EI+A     +   V+ D S
Sbjct: 6   ALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGG--KAIAVQADVS 63

Query: 125 CDVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
                  +   +    D  E     V +L+NN G+   K +   E  E+E+  +  VN +
Sbjct: 64  -------DPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPI--AETSEEEFDRMFTVNTK 114

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
           G   V +     +  R  G I+NI S   
Sbjct: 115 GAFFVLQEAAKRL--RDGGRIINISSSLT 141

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 62.1 bits (151), Expect = 1e-11
 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 11/152 (7%)

Query: 62  YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEY 121
            G  AL+TG   GIG+A A   A+ G  +++  R+    E+    I+             
Sbjct: 6   SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALF----- 60

Query: 122 DFSCDVVSAGNIKAI---EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
             +CDV     +KA+    +A  G  +    NN GI   +     E  E E+  I+ VN+
Sbjct: 61  -VACDVTRDAEVKALVEQTIAAYG-RLDYAFNNAGIEIEQGRLA-EGSEAEFDAIMGVNV 117

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +G     K  +  M+ +  GAIVN  S A + 
Sbjct: 118 KGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG 149

Length = 253

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 61.8 bits (150), Expect = 1e-11
 Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 11/146 (7%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++TGA  GIGK  A +LA+ G  + +   N +    +++EI               
Sbjct: 7   GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKA------IG 60

Query: 123 FSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
            + DV +   + A I+   +    V +L++N GI              +W  +  ++++G
Sbjct: 61  VAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNP--IENYSFADWKKMQAIHVDG 118

Query: 181 TTRVTKAVLTGMMR-RKKGAIVNIGS 205
               TKA L  M +  + G ++ +GS
Sbjct: 119 AFLTTKAALKHMYKDDRGGVVIYMGS 144

Length = 262

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 61.6 bits (150), Expect = 1e-11
 Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 9/148 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK-LEKISNEIQAENPNTQINIVEYDFS 124
           A ITGA  G+G+A A ++A+ G  + L   N    L+  + EI A +       V +   
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEG----VAFAAV 57

Query: 125 CDVVSAGN-IKAIEMAIDGLE-VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            DV         +  A D +  + VL+NN G+    A+   +++  EW  ++ +N+E   
Sbjct: 58  QDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAI--EQIELDEWRRVMAINVESIF 115

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              K  L  +   +  +IVNI S AA  
Sbjct: 116 LGCKHALPYLRASQPASIVNISSVAAFK 143

Length = 251

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 19/156 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TG   GIG   A  LA  G +L +    +  +L     E++A         V + F 
Sbjct: 5   ALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVE-----VIF-FP 58

Query: 125 CDVVS----AGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
            DV         + A + A   ++   L+NN G+         ++  + +  ++ +NL G
Sbjct: 59  ADVADLSAHEAMLDAAQAAWGRID--CLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRG 116

Query: 181 TTRVTKAVLTGMMRRKK------GAIVNIGSGAAIV 210
              +T+AV   M+ + +       +IV + S  AI+
Sbjct: 117 PFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM 152

Length = 256

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 61.3 bits (149), Expect = 2e-11
 Identities = 33/155 (21%), Positives = 66/155 (42%), Gaps = 19/155 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           A++TGA+ GIG+A A +LA  G ++ +    + ++  ++  E+ A             F 
Sbjct: 4   AIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIY------FQ 57

Query: 125 CDVVS-AGN---IKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
            D+   + +   +         L+   L+NN GI         ++ E  +  ++ +NL G
Sbjct: 58  ADIGELSDHEALLDQAWEDFGRLD--CLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRG 115

Query: 181 TTRVTKAVLTGMMRRKK------GAIVNIGSGAAI 209
              +T+AV   M+ +         +I+ + S  A 
Sbjct: 116 PFFLTQAVARRMVEQPDRFDGPHRSIIFVTSINAY 150

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 15/145 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TG + GIG A A  LA+ G ++ ++  +  + E+ + E+  +       +    + C
Sbjct: 11  AIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKY-----GVKTKAYKC 65

Query: 126 DVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           DV    + +++E     ++     + +LI N GIT  K     +   ++W  ++ VNL G
Sbjct: 66  DV---SSQESVEKTFKQIQKDFGKIDILIANAGITVHKP--ALDYTYEQWNKVIDVNLNG 120

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGS 205
                +A      ++ KG+++   S
Sbjct: 121 VFNCAQAAAKIFKKQGKGSLIITAS 145

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 61.3 bits (149), Expect = 2e-11
 Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 11/151 (7%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TG T GIG A   +LA  G  +   +RN  +L++   E + +    +       
Sbjct: 6   GKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVE------G 59

Query: 123 FSCDVVSAGNIKAIEMAID---GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
             CDV S    + +   +    G ++ +L+NN G    K    +   E+++  I+  N E
Sbjct: 60  SVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYT--EEDYSLIMSTNFE 117

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
               +++     +     G IV I S A ++
Sbjct: 118 AAYHLSRLAHPLLKASGNGNIVFISSVAGVI 148

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 16/147 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TGA  GIG+  A + A  G  ++LV R+   + +++ E++A              + 
Sbjct: 11  VVVTGAAQGIGRGVALRAAAEGARVVLVDRS-ELVHEVAAELRAAGGEAL------ALTA 63

Query: 126 DV-VSAGNIKAIEMAIDGL-EVGVLINNVGITY---PKAMFFHEVDEKEWMDIVRVNLEG 180
           D+   AG   A+  A++    + VLINNVG T    P   +  E  E E    +R +L  
Sbjct: 64  DLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAE----IRRSLFP 119

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGA 207
           T    +AVL  M+ +  GAIVN+ S A
Sbjct: 120 TLWCCRAVLPHMLAQGGGAIVNVSSIA 146

Length = 260

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 60.8 bits (148), Expect = 2e-11
 Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 14/148 (9%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           +ITGA  G+G+A A + A+ G  L L   N    E+    ++    +       +   CD
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDG------FYQRCD 57

Query: 127 VVSAGNIKAIEMAID----GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           V     + A+  A +    G++V  ++NN G+      FF E+  ++W   + +NL G  
Sbjct: 58  VRDYSQLTALAQACEEKWGGIDV--IVNNAGVA--SGGFFEELSLEDWDWQIAINLMGVV 113

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +  KA L    R+K G IVNI S A ++
Sbjct: 114 KGCKAFLPLFKRQKSGRIVNIASMAGLM 141

Length = 270

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 60.9 bits (148), Expect = 3e-11
 Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 12/147 (8%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEY 121
           G  AL+TGA+ GIGKA A +LA  G N+++  R+  +  E++  EI        +     
Sbjct: 3   GKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEI------KAVGGKAI 56

Query: 122 DFSCDVVSAGNIKAI-EMAIDGLE-VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
               DV    ++ A+ + AI     + +L+NN G+    +   HE+  ++W  ++ VNL 
Sbjct: 57  AVQADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDAS--SHEMTLEDWNKVIDVNLT 114

Query: 180 GTTRVTKAVLTGMMR-RKKGAIVNIGS 205
           G     +  +    + + KG I+N+ S
Sbjct: 115 GQFLCAREAIKRFRKSKIKGKIINMSS 141

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 60.7 bits (148), Expect = 3e-11
 Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 21/144 (14%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS- 124
           AL+TG T GIG A   +L + G  ++  +R+           + ++    +  V  D + 
Sbjct: 12  ALVTGGTKGIGAATVARLLEAGARVVTTARS-----------RPDDLPEGVEFVAADLTT 60

Query: 125 ---CDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
              C  V     +A+   + G+++  L++ +G +   A  F  + ++EW D + +NL   
Sbjct: 61  AEGCAAV----ARAVLERLGGVDI--LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAA 114

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
            R+ +A+L GM+ R  G I+++ S
Sbjct: 115 VRLDRALLPGMIARGSGVIIHVTS 138

Length = 260

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 60.2 bits (146), Expect = 4e-11
 Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 10/150 (6%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A+ITG   GIG+A A   A+HG  +++   + +  + ++ E+        I+ V   
Sbjct: 4   GKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDP----DISFVH-- 57

Query: 123 FSCDVVSAGNIK-AIEMAID-GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
             CDV    +++ A++ A+     + ++ NN G+         E   +E+  ++ VN+ G
Sbjct: 58  --CDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYG 115

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
               TK     M+  KKG+IV++ S A +V
Sbjct: 116 AFLGTKHAARVMIPAKKGSIVSVASVAGVV 145

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 7e-11
 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 13/140 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITGA+ GIG+A A   A+ G  +++ +R   +L+++  EI+AE             + 
Sbjct: 9   AIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVA------LAG 62

Query: 126 DVVSAGNIKA-IEMAID---GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV      KA + +A++   GL++    NN G          E+  + W + +  NL   
Sbjct: 63  DVRDEAYAKALVALAVERFGGLDIA--FNNAGTLGEMGP-VAEMSLEGWRETLATNLTSA 119

Query: 182 TRVTKAVLTGMMRRKKGAIV 201
               K  +  M+ R  G+++
Sbjct: 120 FLGAKHQIPAMLARGGGSLI 139

Length = 254

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 59.3 bits (144), Expect = 8e-11
 Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 23/153 (15%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD--- 122
           AL+TG + GIGKA A +LA+ G ++++   N+ K +  + E+ AE        +E     
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVI---NYRKSKDAAAEVAAE--------IEELGGK 49

Query: 123 ---FSCDVVSAGNIKAIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRV 176
                 DV    +++ +  A+     G   VL++N      +     E+    W   +  
Sbjct: 50  AVVVRADVSQPQDVEEMFAAVKE-RFGRLDVLVSNAAAGAFRP--LSELTPAHWDAKMNT 106

Query: 177 NLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
           NL+      +     M  R  G IV I S  +I
Sbjct: 107 NLKALVHCAQQAAKLMRERGGGRIVAISSLGSI 139

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 20/146 (13%)

Query: 66  ALITGATDGIGKAFAHQLA-QHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           ALITGA+ GIG A A +LA  H   L+L  R   +L++++ E+    P          F 
Sbjct: 6   ALITGASRGIGAAIARELAPTH--TLLLGGRPAERLDELAAELPGATP----------FP 53

Query: 125 CDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
            D+       AI  A++ L  + VL++N G+         E    EW   + VN+     
Sbjct: 54  VDLTDPE---AIAAAVEQLGRLDVLVHNAGVADLGP--VAESTVDEWRATLEVNVVAPAE 108

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAI 209
           +T+ +L   +R   G +V I SGA +
Sbjct: 109 LTRLLL-PALRAAHGHVVFINSGAGL 133

Length = 227

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 58.9 bits (142), Expect = 1e-10
 Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 13/147 (8%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK--LEKISNEIQAENPNTQINIVE 120
           G  A++TG   GIGKA    LAQ G   ++++ N +K   E + NE+  E  +       
Sbjct: 6   GKVAIVTGGAKGIGKAITVALAQEGAK-VVINYNSSKEAAENLVNELGKEGHDV------ 58

Query: 121 YDFSCDVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
           Y    DV    +    +E A++   +V +L+NN GIT  +   F +++ ++W  ++ VNL
Sbjct: 59  YAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRT--FKKLNREDWERVIDVNL 116

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGS 205
                 T AVL  +   ++G I++I S
Sbjct: 117 SSVFNTTSAVLPYITEAEEGRIISISS 143

Length = 247

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 58.9 bits (143), Expect = 1e-10
 Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 24/150 (16%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           ++TG + GIG A   +L  +G N++    +         + Q EN        ++    D
Sbjct: 13  IVTGGSSGIGLAIVKELLANGANVVNADIH-------GGDGQHEN-------YQF-VPTD 57

Query: 127 VVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMF-------FHEVDEKEWMDIVRVN 177
           V SA  +   +   I+    +  L+NN GI  P+ +         +E++E  +  +  +N
Sbjct: 58  VSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNIN 117

Query: 178 LEGTTRVTKAVLTGMMRRKKGAIVNIGSGA 207
            +G   +++AV   M+++  G IVN+ S A
Sbjct: 118 QKGVFLMSQAVARQMVKQHDGVIVNMSSEA 147

Length = 266

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 58.6 bits (142), Expect = 1e-10
 Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 16/152 (10%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TG   GIG A A +LA  G  +++   +    EK++    A+     + +    
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEA--AQGGPRALGVQ--- 55

Query: 123 FSCDVVSAGNIK-AIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
             CDV S   ++ A E A+  LE G   ++++N GI         E   ++W   + +NL
Sbjct: 56  --CDVTSEAQVQSAFEQAV--LEFGGLDIVVSNAGIATSSP--IAETSLEDWNRSMDINL 109

Query: 179 EGTTRVTKAVLTGMMRRKKGA-IVNIGSGAAI 209
            G   V++     M  +  G  IV   S  A+
Sbjct: 110 TGHFLVSREAFRIMKSQGIGGNIVFNASKNAV 141

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 58.2 bits (141), Expect = 2e-10
 Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 12/141 (8%)

Query: 68  ITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDV 127
           ITGA+ GIG+A A   A+ G  ++L +R+   L +++ E+       +   V      DV
Sbjct: 5   ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREV--RELGGEAIAV----VADV 58

Query: 128 VSAGNIKAI-EMAIDGL-EVGVLINNVGIT-YPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
             A  ++   + A++    +   +NN G+  + +     +V  +E+  +  VN  G    
Sbjct: 59  ADAAQVERAADTAVERFGRIDTWVNNAGVAVFGRFE---DVTPEEFRRVFDVNYLGHVYG 115

Query: 185 TKAVLTGMMRRKKGAIVNIGS 205
           T A L  + RR  GA++N+GS
Sbjct: 116 TLAALPHLRRRGGGALINVGS 136

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 58.1 bits (141), Expect = 2e-10
 Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 22/154 (14%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNT----QINIVEY 121
             +TGA  GIG+A A +LA  G  L L  R+ + L +   + +A          ++I +Y
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDY 62

Query: 122 DFSCDVVS-AGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDE---KEWMDIVRVN 177
           D    V + A +I A   ++D     V++N  GI+      +  VD    ++W  +V VN
Sbjct: 63  D---AVAAFAADIHAAHGSMD-----VVMNIAGIS-----AWGTVDRLTHEQWRRMVDVN 109

Query: 178 LEGTTRVTKAVLTGMMR-RKKGAIVNIGSGAAIV 210
           L G   V +  +  M+   + G +VN+ S A +V
Sbjct: 110 LMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV 143

Length = 272

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 57.9 bits (140), Expect = 3e-10
 Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 17/150 (11%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA  GIG+A    LA+ G  ++ VSR    L+ +  E     P          
Sbjct: 7   GKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGIEPV--------- 57

Query: 123 FSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
                V   +  A E A+  +  V +L+NN  +   +   F EV ++ +     VN+   
Sbjct: 58  ----CVDLSDWDATEEALGSVGPVDLLVNNAAVAILQP--FLEVTKEAFDRSFDVNVRAV 111

Query: 182 TRVTKAVLTGMMRRK-KGAIVNIGSGAAIV 210
             V++ V  GM+ R   G+IVN+ S A+  
Sbjct: 112 IHVSQIVARGMIARGVPGSIVNVSSQASQR 141

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 57.7 bits (140), Expect = 3e-10
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA+ GIG+A A  LAQ G ++I+ SR  +  + +++ I A     +       
Sbjct: 8   GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEA------ 61

Query: 123 FSCDVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFH--EVDEKEWMDIVRVNL 178
            +C +     I A+   I      + +L+NN     P   F H  + D   +   V VN+
Sbjct: 62  LACHIGEMEQIDALFAHIRERHGRLDILVNNAA-ANP--YFGHILDTDLGAFQKTVDVNI 118

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            G   ++      M  +  G+IVN+ S   + 
Sbjct: 119 RGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS 150

Length = 252

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 57.5 bits (139), Expect = 4e-10
 Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 13/159 (8%)

Query: 56  PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNT 114
           P+     G  A +TGA  GIG+  A  LAQ G ++ L   R  + L + +  I+A     
Sbjct: 1   PQLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRA 60

Query: 115 QINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVL---INNVGITYPKAMFFHEVDEKEWM 171
                    + DV S  +++A  +A    E+G L   +N  GI         E++E++W 
Sbjct: 61  IQ------IAADVTSKADLRA-AVARTEAELGALTLAVNAAGIANANPA--EEMEEEQWQ 111

Query: 172 DIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            ++ +NL G     +A    M+    G+IVNI S + I+
Sbjct: 112 TVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGII 150

Length = 254

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 57.3 bits (138), Expect = 4e-10
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 17/146 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           A +TG   GIG +   +L + G  ++     N  +  K   + +A         + +DF 
Sbjct: 6   AYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKA---------LGFDFI 56

Query: 125 CDVVSAGNIKAIEMAIDGL-----EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
               + G+  + + A D +     E+ VL+NN GIT  + + F ++  ++W  ++  NL 
Sbjct: 57  ASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGIT--RDVVFRKMTREDWTAVIDTNLT 114

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGS 205
               VTK V+ GM+ R  G I+NI S
Sbjct: 115 SLFNVTKQVIDGMVERGWGRIINISS 140

Length = 246

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 56.8 bits (138), Expect = 5e-10
 Identities = 40/150 (26%), Positives = 60/150 (40%), Gaps = 19/150 (12%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEY 121
           G   L+TGA  GIG+AF  QL   G   +  + R+   +  +   +       Q+     
Sbjct: 6   GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVP----LQL----- 56

Query: 122 DFSCDVVSAGNIK-AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
               DV    ++  A E A D   V +L+NN GI    +    E DE      +  N  G
Sbjct: 57  ----DVTDPASVAAAAEAASD---VTILVNNAGIFRTGS-LLLEGDEDALRAEMETNYFG 108

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              + +A    +     GAIVN+ S  + V
Sbjct: 109 PLAMARAFAPVLAANGGGAIVNVLSVLSWV 138

Length = 238

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 56.8 bits (137), Expect = 6e-10
 Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 9/147 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TG   GIGKA A  LA+ G ++++        E ++  IQ                C
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQA------IGLEC 55

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           +V S  +++A ++  +     + +L+NN G   PK  F   + E+++    ++NL    R
Sbjct: 56  NVTSEQDLEAVVKATVSQFGGITILVNNAGGGGPKP-FDMPMTEEDFEWAFKLNLFSAFR 114

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +++     M +   GAI+NI S ++  
Sbjct: 115 LSQLCAPHMQKAGGGAILNISSMSSEN 141

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 56.8 bits (137), Expect = 7e-10
 Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 13/147 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+T +TDGIG A A +LAQ G ++++ SR    +++    +Q E  +    +      C
Sbjct: 13  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTV------C 66

Query: 126 DVVSAGNI-KAIEMAID---GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
            V  A +  + +  A++   G+++ V    V   +   +   +  E+ W  I+ VN++ T
Sbjct: 67  HVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNIL---DSTEEVWDKILDVNVKAT 123

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAA 208
             +TKAV+  M +R  G++V + S AA
Sbjct: 124 ALMTKAVVPEMEKRGGGSVVIVSSVAA 150

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 57.0 bits (138), Expect = 7e-10
 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 10/147 (6%)

Query: 63  GSWALITGATD-GIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEY 121
           G   L+T A   GIG A A +  + G  +++   +  +L + ++E+ AE    ++     
Sbjct: 17  GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRV----E 72

Query: 122 DFSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
              CDV S   + A I+ A++ L  + VL+NN G+     +   ++ + EW  ++ V L 
Sbjct: 73  AVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVV--DMTDDEWSRVLDVTLT 130

Query: 180 GTTRVTKAVLTGMM-RRKKGAIVNIGS 205
           GT R T+A L  M  R   G IVN  S
Sbjct: 131 GTFRATRAALRYMRARGHGGVIVNNAS 157

Length = 262

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 56.8 bits (137), Expect = 7e-10
 Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 16/160 (10%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLIL--VSRNHNKLEKISNEIQAENPNTQINIVE 120
           G  A ITGA  G G+A A +LA  G ++I   +    +         + +   T   +VE
Sbjct: 3   GKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDET-ARLVE 61

Query: 121 YDFSCDVVSAGNIK---AIEMAI-DGLEV----GVLINNVGI-TYPKAMFFHEVDEKEWM 171
                 +    +++    +   + DG+E      V++ N G+ +Y ++    E+ E++W 
Sbjct: 62  ALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRS---WELSEEQWD 118

Query: 172 DIVRVNLEGTTRVTKAVLTGMMRRKK-GAIVNIGSGAAIV 210
            ++ +NL G  R  KAV+  M+ R   G+I+   S A + 
Sbjct: 119 TVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLK 158

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 56.1 bits (135), Expect = 9e-10
 Identities = 42/146 (28%), Positives = 77/146 (52%), Gaps = 8/146 (5%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           L+TGA+ GIG+A A++LA  G  + +      +  E + + IQA+  N    ++++D + 
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGN--ARLLQFDVA- 58

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           D V+   +   ++A  G   GV++ N GIT   A  F  + E++W  ++  NL+G   V 
Sbjct: 59  DRVACRTLLEADIAEHGAYYGVVL-NAGITRDAA--FPALSEEDWDIVIHTNLDGFYNVI 115

Query: 186 KAVLTGMMR-RKKGAIVNIGSGAAIV 210
                 M+R R+ G I+ + S + ++
Sbjct: 116 HPCTMPMIRARQGGRIITLASVSGVM 141

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 56.3 bits (136), Expect = 9e-10
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G   +ITGA  GIGK  A +LA+ G  +I+  R+  K E+ + EI+ +  N ++ +    
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRH-- 58

Query: 123 FSCDVVSAGNIKAI--EMAIDGLEVGVLINNVGI 154
              D+ S  +I+A   E   +   + VLINN G+
Sbjct: 59  --LDLASLKSIRAFAAEFLAEEDRLDVLINNAGV 90

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 12/146 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TGA  GIG   A +L   G  L LV     +L  ++ E+  ++              
Sbjct: 12  VVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDD-------RVLTVVA 64

Query: 126 DVVS-AGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV   A    A E A++    + V++ N GI    +    +VD   +  ++ VNL G   
Sbjct: 65  DVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGS--VAQVDPDAFRRVIDVNLLGVFH 122

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAI 209
             +A L  ++ R +G ++ + S AA 
Sbjct: 123 TVRATLPALIER-RGYVLQVSSLAAF 147

Length = 296

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 24/146 (16%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNE-IQAENPNTQINIVEYDFS 124
           AL+TGA+ GIGKA A +LA  G  +   +R  +K+E +++  +                S
Sbjct: 6   ALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHP-------------LS 52

Query: 125 CDVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
            DV    +IKA   A+D +      + VL+NN G  Y       +V   E      VNL 
Sbjct: 53  LDVTDEASIKA---AVDTIIAEEGRIDVLVNNAG--YGSYGAIEDVPIDEARRQFEVNLF 107

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGS 205
           G  R+T+ VL  M  ++ G I+NI S
Sbjct: 108 GAARLTQLVLPHMRAQRSGRIINISS 133

Length = 273

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 55.9 bits (135), Expect = 1e-09
 Identities = 33/147 (22%), Positives = 58/147 (39%), Gaps = 11/147 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A + GA DG+G A A + A  G ++ L +R   KLE +  +I  +               
Sbjct: 2   AAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGG-----SAKAVPT 56

Query: 126 DVVSAGNIKAIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           D      + A+   I+  E+G   VL+ N G          E   + +  +  +   G  
Sbjct: 57  DARDEDEVIALFDLIEE-EIGPLEVLVYNAGANVWFP--ILETTPRVFEKVWEMAAFGGF 113

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAI 209
              +     M+ R +G I+  G+ A++
Sbjct: 114 LAAREAAKRMLARGRGTIIFTGATASL 140

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++TGA+DG+G   A +LA  G  +IL  RN  K E     I+   P+ ++++   D
Sbjct: 14  GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALD 73

Query: 123 FSCDVVSAGNIKAI--EMAIDGLEVGVLINNVGITYP 157
            S    S  ++ A+  ++  +G  + +LINN G+  P
Sbjct: 74  LS----SLASVAALGEQLRAEGRPIHLLINNAGVMTP 106

Length = 313

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 55.7 bits (134), Expect = 2e-09
 Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 14/148 (9%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++TG   GIGK       + G  ++         E+ ++  +AE PN       + 
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFAD---IDEERGADFAEAEGPNL------FF 51

Query: 123 FSCDVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
              DV     +K +  A+      + VL+NN        +    +  +EW  I+ VNL G
Sbjct: 52  VHGDVADETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILS--SLLLEEWDRILSVNLTG 109

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
              +++      + + KG I+NI S  A
Sbjct: 110 PYELSR-YCRDELIKNKGRIINIASTRA 136

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 9/143 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++ G    +G    H LA+ G  + +   N  K   ++ EI AE          Y F  
Sbjct: 5   AVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMA----YGFGA 60

Query: 126 DVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D  S  ++ A+   +D +   V +L+ N GI   KA F  +    ++   ++VNL G   
Sbjct: 61  DATSEQSVLALSRGVDEIFGRVDLLVYNAGIA--KAAFITDFQLGDFDRSLQVNLVGYFL 118

Query: 184 VTKAVLTGMMRRK-KGAIVNIGS 205
             +     M+R   +G I+ I S
Sbjct: 119 CAREFSRLMIRDGIQGRIIQINS 141

Length = 259

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 55.5 bits (134), Expect = 2e-09
 Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 14/144 (9%)

Query: 67  LITGATDGIGKAFAHQLA---QHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDF 123
           LITG + GIG   A +LA        +    R+  K  ++     A    T +  ++ D 
Sbjct: 4   LITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGT-LETLQLD- 61

Query: 124 SCDVVSAGNIKAIEMAIDGLEVGVLINN--VGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
              V  + ++ A    +    V VL+ N  VG+  P       + E     +  VN+ GT
Sbjct: 62  ---VCDSKSVAAAVERVTERHVDVLVCNAGVGLLGPLEA----LSEDAMASVFDVNVFGT 114

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
            R+ +A L  M RR  G I+   S
Sbjct: 115 VRMLQAFLPDMKRRGSGRILVTSS 138

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 55.0 bits (133), Expect = 2e-09
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 7/141 (4%)

Query: 65  WALITGATDGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAENPNTQINIVEYDF 123
            AL+TGA   IG+A A  LA  G  +++       + +++ +E+ A   +    +V+ D 
Sbjct: 2   VALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAV--LVQADL 59

Query: 124 SCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           S     A  + A   A    +  VL+NN    YP  +   +  E  W ++  +NL+    
Sbjct: 60  SDFAACADLVAAAFRAFGRCD--VLVNNASAFYPTPLG--QGSEDAWAELFGINLKAPYL 115

Query: 184 VTKAVLTGMMRRKKGAIVNIG 204
           + +A    +   + G+I+NI 
Sbjct: 116 LIQAFARRLAGSRNGSIINII 136

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 6/141 (4%)

Query: 68  ITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDV 127
           ++G   G+G+  A + A+ G +++L +R   +L++++ EI           V  D + D 
Sbjct: 10  VSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRAL--AVPTDIT-DE 66

Query: 128 VSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKA 187
               N+ A+ +   G  V  L+NN     P      + D   W  ++ +N+ GT R+T+A
Sbjct: 67  DQCANLVALALERFG-RVDALVNN-AFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQA 124

Query: 188 VLTGMMRRKKGAIVNIGSGAA 208
                +    G+IV I S   
Sbjct: 125 FTPA-LAESGGSIVMINSMVL 144

Length = 258

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 55.2 bits (133), Expect = 3e-09
 Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 20/148 (13%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
             ITG   GIG+A A + A  G  L+++ R+    +K++  +  E+ + Q          
Sbjct: 272 VAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQA--------- 322

Query: 126 DVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDIVR---VNLEG 180
           D+     +++    I      + VL+NN GI       F    E+   D  R   VNL G
Sbjct: 323 DITDEAAVESAFAQIQARWGRLDVLVNNAGIAEV----FKPSLEQSAEDFTRVYDVNLSG 378

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
                +A    M   + G IVN+GS A+
Sbjct: 379 AFACARAAARLM--SQGGVIVNLGSIAS 404

Length = 520

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 31/156 (19%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TGA  GIG+  A   A+ G  ++    +    E+ +  I+A         V + +  
Sbjct: 318 VVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGA------VAHAYRV 371

Query: 126 DVVSAGNIKAIE-MAID-GLEVGV---LINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           DV    +  A+E  A     E GV   ++NN GI    A  F +   ++W  ++ VNL G
Sbjct: 372 DV---SDADAMEAFAEWVRAEHGVPDIVVNNAGIGM--AGGFLDTSAEDWDRVLDVNLWG 426

Query: 181 TTRVTKAVLTG------MM--RRKKGAIVNIGSGAA 208
                  V+ G       M  R   G IVN+ S AA
Sbjct: 427 -------VIHGCRLFGRQMVERGTGGHIVNVASAAA 455

Length = 582

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 4e-09
 Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 10/146 (6%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEY 121
           G   +ITG + G+G+A A +  +    +++  R +  +   ++ EI+      +   V+ 
Sbjct: 7   GKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIK--KAGGEAIAVKG 64

Query: 122 DFSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           D +   V +  +  I+ A+     + V+INN GI        HE+  ++W  ++  NL G
Sbjct: 65  DVT---VESDVVNLIQTAVKEFGTLDVMINNAGIENAVPS--HEMSLEDWNKVINTNLTG 119

Query: 181 TTRVTKAVLTGMMRR-KKGAIVNIGS 205
               ++  +   +    KG I+N+ S
Sbjct: 120 AFLGSREAIKYFVEHDIKGNIINMSS 145

Length = 261

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.6 bits (132), Expect = 4e-09
 Identities = 41/148 (27%), Positives = 56/148 (37%), Gaps = 28/148 (18%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEY--DFS 124
           LITGA  GIG A A      G  +  V +              + P+   N      D S
Sbjct: 9   LITGAASGIGLAQARAFLAQGAQVYGVDKQ-------------DKPDLSGNFHFLQLDLS 55

Query: 125 CDVVSAGNIKAIEMAIDGLEVGVLINNVGI--TYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            D+    +            V +L N  GI   Y       +   +EW  I   NL  T 
Sbjct: 56  DDLEPLFDWVP--------SVDILCNTAGILDDYKPL---LDTSLEEWQHIFDTNLTSTF 104

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            +T+A L  M+ RK G I+N+ S A+ V
Sbjct: 105 LLTRAYLPQMLERKSGIIINMCSIASFV 132

Length = 235

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 54.4 bits (131), Expect = 4e-09
 Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 11/142 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITGA+ GIG+A A  LAQ G  ++ V      + +  ++I++     +   V      
Sbjct: 9   AVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHV------ 61

Query: 126 DVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+     +K     I      V VL NN G+    A   HE     +  I+ V++ GT  
Sbjct: 62  DISDEQQVKDFASEIKEQFGRVDVLFNNAGVDN-AAGRIHEYPVDVFDKIMAVDMRGTFL 120

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
           +TK +L  MM  + G+I+N  S
Sbjct: 121 MTKMLLPLMM-EQGGSIINTSS 141

Length = 272

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 54.1 bits (130), Expect = 6e-09
 Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 19/158 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQ----HGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEY 121
            L+TGA+ G G+  A +LA+     G  L+L +RN   L ++  EI AE    ++  V  
Sbjct: 3   CLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSL 62

Query: 122 DFSCDVVSAGNIKAIEMAI--DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
           D   +      +KA+       GL+  +LINN G     +  F      +  D  +V   
Sbjct: 63  DLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGF-----VDLSDSTQVQNY 117

Query: 180 GTTRVTKAVLTG--MMRRKKGA------IVNIGSGAAI 209
               +T  +     +++  K +      +VNI S  AI
Sbjct: 118 WALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAI 155

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 53.8 bits (130), Expect = 6e-09
 Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 26/161 (16%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++TG   G+G A   +L   G  ++++   ++  E ++            +   + 
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVA---------KLGDNCRF- 51

Query: 123 FSCDVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYP------KAMFFHEVDEKEWMDIV 174
              DV S  ++K A+ +A      + +++N  GI         K    H ++   +  ++
Sbjct: 52  VPVDVTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLE--LFQRVI 109

Query: 175 RVNLEGTTRVTKAVLTGMMRR------KKGAIVNIGSGAAI 209
            VNL GT  V +     M +       ++G I+N  S AA 
Sbjct: 110 NVNLIGTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAF 150

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 54.1 bits (130), Expect = 7e-09
 Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 9/150 (6%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TG   GIG++      +HG  + +V    +  + + + +  E PN         
Sbjct: 18  GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGE-PNVCF------ 70

Query: 123 FSCDVVSAGNI-KAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           F CDV    ++ +A++  +D    + +++NN G+T P       V+  E+  +  VN++G
Sbjct: 71  FHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKG 130

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
                K     M+  KKG+IV++ S A+ +
Sbjct: 131 VFLGMKHAARIMIPLKKGSIVSLCSVASAI 160

Length = 280

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 20/155 (12%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A+ITGA  G G AFA   A  G+ L+L     + L++   E++A+     + +    
Sbjct: 6   GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEV-LGVR--- 61

Query: 123 FSCDVVSAGNIKAIEMAIDGLE----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
              DV  A  ++A  +A   LE    V +L NN G+     ++ + + + EW  ++ VNL
Sbjct: 62  --TDVSDAAQVEA--LADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEW--VLGVNL 115

Query: 179 EGTTRVTKAVLTGMMRRKK------GAIVNIGSGA 207
            G     +A    M+   +      G IVN  S A
Sbjct: 116 WGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMA 150

Length = 287

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 53.3 bits (128), Expect = 1e-08
 Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 8/146 (5%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A  T ++ GIG   A  LA+ G ++IL+SRN   L+K   +I++E+      IV   
Sbjct: 8   GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIV--- 64

Query: 123 FSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
              D+    +++     +  + E  +   + G   PK  +F E+  ++W   V++ L   
Sbjct: 65  --ADLTKREDLERTVKELKNIGEPDIFFFSTG--GPKPGYFMEMSMEDWEGAVKLLLYPA 120

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGA 207
             +T+A++  M R+  G I+   S A
Sbjct: 121 VYLTRALVPAMERKGFGRIIYSTSVA 146

Length = 263

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 53.3 bits (128), Expect = 1e-08
 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 12/150 (8%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++TGA  GIG A A +LA+ G  +++   +            A+    QI      
Sbjct: 3   GKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGA---------AQAVVAQIAGGALA 53

Query: 123 FSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
              DV     + A  E A++    + +L+NN G  +       + D   W   + +NL G
Sbjct: 54  LRVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAII-DTDLAVWDQTMAINLRG 112

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           T    +     M+ R  G+IVN+ S A   
Sbjct: 113 TFLCCRHAAPRMIARGGGSIVNLSSIAGQS 142

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 12/144 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TG + GIG A    L + G ++ +  R+  +L      ++ + P  ++        C
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARL----LAARC 66

Query: 126 DVVSAGNIKA----IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV+   ++ A    +E    G  V +L+NN G        F +  +  W D + +     
Sbjct: 67  DVLDEADVAAFAAAVEARFGG--VDMLVNNAGQGRVST--FADTTDDAWRDELELKYFSV 122

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
              T+A L  +      +IV + S
Sbjct: 123 INPTRAFLPLLRASAAASIVCVNS 146

Length = 265

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 52.2 bits (125), Expect = 2e-08
 Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 15/145 (10%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN-------PNTQINIV 119
           L+TGA+ G+G+  A   A  G  +ILV+R+  KLEK+ + I               ++  
Sbjct: 10  LVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAE 69

Query: 120 EYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
           E +F  +  +A   +A +  +DG     +++  G  Y  +    +    EW++  R+N  
Sbjct: 70  EKEF--EQFAATIAEATQGKLDG-----IVHCAGYFYALSPLDFQTVA-EWVNQYRINTV 121

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIG 204
               +T+A+   + +    +++ +G
Sbjct: 122 APMGLTRALFPLLKQSPDASVIFVG 146

Length = 239

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 52.5 bits (126), Expect = 2e-08
 Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 15/148 (10%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           L+TG   GIGK  A  L   G  +++V RN +KL   + EI+A      +     D + +
Sbjct: 11  LVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDE 70

Query: 127 VVSAGNIKAIEMAIDGLEVGVLINNVG------ITYPKAMFFHEVDEKEWMDIVRVNLEG 180
              A  + A       L  GV+    G      IT        ++D   W   V +N+ G
Sbjct: 71  DQVARAVDAATAWHGRLH-GVVHCAGGSETIGPIT--------QIDSDAWRRTVDLNVNG 121

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
           T  V K     ++R   G+ V I S AA
Sbjct: 122 TMYVLKHAARELVRGGGGSFVGISSIAA 149

Length = 276

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 52.4 bits (126), Expect = 2e-08
 Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 12/149 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK-LEKISNEIQAENPNTQINIVEYDFS 124
           A+ITGA  GIG+A A +LA  G N++L   N  +  +    EI     N           
Sbjct: 5   AIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNA------VAVG 58

Query: 125 CDVVSAGNI-KAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            DV    ++   I+ A++      V++NN GI          + E++   +  VN+ G  
Sbjct: 59  ADVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITP--LLTITEEDLKKVYAVNVFGVL 116

Query: 183 RVTKAVLTGMMRRK-KGAIVNIGSGAAIV 210
              +A      +    G I+N  S A + 
Sbjct: 117 FGIQAAARQFKKLGHGGKIINASSIAGVQ 145

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 51.9 bits (125), Expect = 3e-08
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 7/139 (5%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK-LEKISNEIQAENPNTQINIVEYDFS 124
           ALITG    IG A A  L   G  + +         + ++ E+ A  P +    ++ D  
Sbjct: 9   ALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAA-ALQADLL 67

Query: 125 CDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
                   + A   A   L+   L+NN    YP  +    + E +W D+   NL+    +
Sbjct: 68  DPDALPELVAACVAAFGRLD--ALVNNASSFYPTPL--GSITEAQWDDLFASNLKAPFFL 123

Query: 185 TKAVLTGMMRRKKGAIVNI 203
           ++A     +R+++GAIVNI
Sbjct: 124 SQA-AAPQLRKQRGAIVNI 141

Length = 249

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 51.7 bits (124), Expect = 5e-08
 Identities = 32/149 (21%), Positives = 69/149 (46%), Gaps = 17/149 (11%)

Query: 62  YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEY 121
            G  A++TG   G+G+ +A  LA+ G ++I ++ +    ++    I  E    ++  V+ 
Sbjct: 14  DGKVAIVTGGNTGLGQGYAVALAKAGADII-ITTHGTNWDETRRLI--EKEGRKVTFVQV 70

Query: 122 DFSCDVVSAGNIKAIEMAIDGL-----EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRV 176
           D +         ++ E  +        ++ +L+NN G      +   E  +++W  ++ +
Sbjct: 71  DLT-------KPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLL--EYKDEDWNAVMDI 121

Query: 177 NLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
           NL     +++AV   M ++  G I+NI S
Sbjct: 122 NLNSVYHLSQAVAKVMAKQGSGKIINIAS 150

Length = 258

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 51.0 bits (122), Expect = 6e-08
 Identities = 38/146 (26%), Positives = 58/146 (39%), Gaps = 8/146 (5%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G    ITG   G+G+A A  LA  G  + L+ R    L +    +    P   + I   D
Sbjct: 7   GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGV----PADALRIGGID 62

Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
                 +   +  +      L+   L+N  G      +   + D   W  +  VN++ T 
Sbjct: 63  LVDPQAARRAVDEVNRQFGRLDA--LVNIAGAFVWGTI--ADGDADTWDRMYGVNVKTTL 118

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAA 208
             +KA L  +     G IVNIG+GAA
Sbjct: 119 NASKAALPALTASGGGRIVNIGAGAA 144

Length = 239

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 51.2 bits (123), Expect = 6e-08
 Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 10/143 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNL-ILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           A++T +  GIGKA A  LAQ G ++ I    +    ++ + E+++     +  I + D S
Sbjct: 5   AIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAE--IRQLDLS 62

Query: 125 CDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
            D+      +A++  I  L  + VL+NN G    KA F  ++D  EW  I  V+++G   
Sbjct: 63  -DLPEGA--QALDKLIQRLGRIDVLVNNAG-AMTKAPFL-DMDFDEWRKIFTVDVDGAFL 117

Query: 184 VTKAVLTGMMRRKKGA-IVNIGS 205
            ++     M+++ +G  I+NI S
Sbjct: 118 CSQIAARHMVKQGQGGRIINITS 140

Length = 256

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 50.9 bits (122), Expect = 7e-08
 Identities = 35/142 (24%), Positives = 72/142 (50%), Gaps = 9/142 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA  G+G A A   A+ G ++++ +R  ++L++++ +I+A     + ++V  D + 
Sbjct: 13  AVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAH 70

Query: 126 DVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
              +AG       A++    + +++NNVG T P  +       K+  D    N+     +
Sbjct: 71  PEATAG---LAGQAVEAFGRLDIVVNNVGGTMPNPLL--STSTKDLADAFTFNVATAHAL 125

Query: 185 TKAVLTGMMRRK-KGAIVNIGS 205
           T A +  M+     G+++NI S
Sbjct: 126 TVAAVPLMLEHSGGGSVINISS 147

Length = 263

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 8e-08
 Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 27/158 (17%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           +ITG + G+GKA A + A+ G N+++  R   KLE+   EI+      Q+  V+ D    
Sbjct: 5   IITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQ--FPGQVLTVQMDVRNP 62

Query: 127 VVSAGNIKAIEMA---IDGLEVGVLINNVGITYPKAMFF----HEVDEKEWMDIVRVNLE 179
                 ++ I+     ID      LINN       A  F     ++    W  ++ + L 
Sbjct: 63  EDVQKMVEQIDEKFGRIDA-----LINNA------AGNFICPAEDLSVNGWNSVIDIVLN 111

Query: 180 GTTRVTKAVLTGMMRRK-KGAIVNI------GSGAAIV 210
           GT   ++AV    + +  KG I+N+       +G  ++
Sbjct: 112 GTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVI 149

Length = 252

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 50.9 bits (122), Expect = 8e-08
 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 13/149 (8%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A+ITG   GIG A A +LA  G  +++   +    +  ++E+           V   
Sbjct: 7   GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGL-------FVP-- 57

Query: 123 FSCDVVSAGNIKAI-EMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
              DV     + A+ + A +    V +  NN GI+ P+           W  +  VNL  
Sbjct: 58  --TDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTS 115

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
                KA L  M+R+ KG+I+N  S  A+
Sbjct: 116 VYLCCKAALPHMVRQGKGSIINTASFVAV 144

Length = 255

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 50.9 bits (122), Expect = 9e-08
 Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 17/148 (11%)

Query: 68  ITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDV 127
           ITGA+ GIG+A A   A+ G  L+L +R+   L+ ++ E +A     ++ +V      DV
Sbjct: 12  ITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVV----PTDV 65

Query: 128 VSAGNIKAIEMAIDGLEVG----VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
             A  +KA  +A      G    V +NNVG+       F E   +    +++ NL G  R
Sbjct: 66  TDADQVKA--LATQAASFGGRIDVWVNNVGVGAVGR--FEETPIEAHEQVIQTNLIGYMR 121

Query: 184 VTKAVLTGMMRRKKGAIVN---IGSGAA 208
              A L    ++  G  +N   +G  AA
Sbjct: 122 DAHAALPIFKKQGHGIFINMISLGGFAA 149

Length = 330

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 50.7 bits (121), Expect = 1e-07
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 16/149 (10%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           LITGA  GIGKA A  +A+ G  + +V RN  + E+   EI+ E+ N  I +   D S  
Sbjct: 5   LITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDMS-- 62

Query: 127 VVSAGNIKAI-----EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
                + K +     E   +G ++ VLINN G    K     E+ E         N  GT
Sbjct: 63  -----DPKQVWEFVEEFKEEGKKLHVLINNAGCMVNK----RELTEDGLEKNFATNTLGT 113

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             +T  ++  + + +   ++ + SG  +V
Sbjct: 114 YILTTHLIPVLEKEEDPRVITVSSGGMLV 142

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 50.5 bits (121), Expect = 1e-07
 Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 16/147 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
            L+TGA+ G+G A A   A+ G  +++   R+    E ++ E        Q         
Sbjct: 3   VLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQ--------- 53

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYP-KAMFFHEVDEKEWMDI---VRVNL 178
            DV     ++A IE A +    V  ++NN  I +P         D  +W D    +   +
Sbjct: 54  ADVRDRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAV 113

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGS 205
           +G   + +AVL     R  G ++NIG+
Sbjct: 114 KGALNLLQAVLPDFKERGSGRVINIGT 140

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 12/144 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIG+A A +    G  +++      +    + EI           V  D + 
Sbjct: 9   ALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGP-----AAIAVSLDVTR 63

Query: 126 -DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
            D +    + A      G++  +L NN  + +  A    ++    +  +  VN++G   +
Sbjct: 64  QDSIDRI-VAAAVERFGGID--ILFNNAAL-FDMAPIL-DISRDSYDRLFAVNVKGLFFL 118

Query: 185 TKAVLTGMM-RRKKGAIVNIGSGA 207
            +AV   M+ + + G I+N+ S A
Sbjct: 119 MQAVARHMVEQGRGGKIINMASQA 142

Length = 257

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 50.2 bits (120), Expect = 1e-07
 Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 11/155 (7%)

Query: 56  PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQ 115
             NL+  G  A+ITGA  GIGK  A   A  G ++++   N +    + +EIQ       
Sbjct: 4   SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA- 62

Query: 116 INIVEYDFSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDI 173
                +   CD+ S   + A  + A+  L +V +L+NN G   PK  F   + +      
Sbjct: 63  -----FACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKP-FDMPMADFRRA-- 114

Query: 174 VRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
             +N+     +++ V   M +   G I+ I S AA
Sbjct: 115 YELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA 149

Length = 255

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEY 121
           G  AL+TG T G+G A A   A+ G   L++  RN  K E  + E++A     +   V+ 
Sbjct: 6   GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQA 63

Query: 122 DFSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           D S DV     +  +  A +    +  L+N  G+T  +     +   + +     VN+  
Sbjct: 64  DLS-DVEDCRRV--VAAADEAFGRLDALVNAAGLT-DRGTIL-DTSPELFDRHFAVNVRA 118

Query: 181 TTRVTKAVLTGMMRRK-KGAIVNIGSGAA 208
              + +  +  M RRK +G IVNIGS +A
Sbjct: 119 PFFLMQEAIKLMRRRKAEGTIVNIGSMSA 147

Length = 260

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 49.1 bits (117), Expect = 2e-07
 Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 19/123 (15%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           ALI GAT GIG+A A  LA  G  L+L  R+   L  ++ E+ A                
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALARPA----------- 49

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEK--EWMDIVRVNLEGTTR 183
           DV +   + A  +A +   + +L+   G    K +       K   W  I+  NL G   
Sbjct: 50  DVAAELEVWA--LAQELGPLDLLVYAAGAILGKPL----ARTKPAAWRRILDANLTGAAL 103

Query: 184 VTK 186
           V K
Sbjct: 104 VLK 106

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 49.4 bits (118), Expect = 2e-07
 Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
            +ITGA+ GIG A A   A+ G  + L   RN +  E +   I+ +     + +     +
Sbjct: 5   MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQG-GEALAV-----A 58

Query: 125 CDVVSAGNIKAIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
            DV    ++  +  A+D  E+G    L+NN GI   + M   ++D      I   N+ G+
Sbjct: 59  ADVADEADVLRLFEAVDR-ELGRLDALVNNAGILEAQ-MRLEQMDAARLTRIFATNVVGS 116

Query: 182 TRVTKAVLTGMMRR---KKGAIVNIGSGAA 208
               +  +  M  R   + GAIVN+ S AA
Sbjct: 117 FLCAREAVKRMSTRHGGRGGAIVNVSSMAA 146

Length = 248

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 49.4 bits (118), Expect = 3e-07
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 25/152 (16%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVE-- 120
           G  AL+TGA  G+G+  A  LA+ G +++   R             +E   TQ   VE  
Sbjct: 5   GKVALVTGANTGLGQGIAVGLAEAGADIVGAGR-------------SEPSETQ-QQVEAL 50

Query: 121 ----YDFSCDVVSAGNIKA-IEMAIDGLE-VGVLINNVGITYPKAMFFHEVDEKEWMDIV 174
                  + D+     IKA ++ A++    + +L+NN GI         E  EK+W D++
Sbjct: 51  GRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAE--EFSEKDWDDVM 108

Query: 175 RVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGS 205
            VNL+    +T+A     +++ + G I+NI S
Sbjct: 109 NVNLKSVFFLTQAAAKHFLKQGRGGKIINIAS 140

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 15/149 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TG++ GIGKA A +LA+ G ++ +  +R+    E+ + EI+A               
Sbjct: 7   ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALA------VK 60

Query: 125 CDVVSAGNIKAIEMAIDGL--EVGVLINNV--GITYPKAMFFHEVDEKEWMDIVRVNLEG 180
            +V     IK +   ID     + V +NN   G+  P AM   E++E  W   + +N + 
Sbjct: 61  ANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRP-AM---ELEESHWDWTMNINAKA 116

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
                +     M +   G I+++ S  +I
Sbjct: 117 LLFCAQEAAKLMEKVGGGKIISLSSLGSI 145

Length = 250

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 8/98 (8%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++TGA  G+G   A  LA  G +++L  RN +K +  +  I A  P   + + E D
Sbjct: 16  GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELD 75

Query: 123 F-SCDVV--SAGNIKAIEMAIDGLEVGVLINNVGITYP 157
             S   V  +A  ++A    ID     +LINN G+ Y 
Sbjct: 76  LTSLASVRAAADALRAAYPRID-----LLINNAGVMYT 108

Length = 306

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.9 bits (117), Expect = 3e-07
 Identities = 31/148 (20%), Positives = 65/148 (43%), Gaps = 15/148 (10%)

Query: 65  WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
             L+TG + G+G A A   A+ G  +++   N+++ E  +  +  E  +  I +      
Sbjct: 7   TVLVTGGSRGLGAAIARAFAREGARVVV---NYHQSEDAAEALADELGDRAIAL-----Q 58

Query: 125 CDVVSAGNIKA-IEMAID--GLEVGVLINNVGITY---PKAM-FFHEVDEKEWMDIVRVN 177
            DV     ++A    A +  G  +  ++NN    +     A     ++  +++   +  +
Sbjct: 59  ADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGS 118

Query: 178 LEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
           ++G     +A L GM  +  G I+NIG+
Sbjct: 119 VKGALNTIQAALPGMREQGFGRIINIGT 146

Length = 253

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 18/144 (12%)

Query: 68  ITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDV 127
           ITG   GIG A A  LA  G  + +   +    ++ + E+          +V      DV
Sbjct: 10  ITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL---------GLVVG-GPLDV 59

Query: 128 VSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMD--IVRVNLEGTTR 183
               +  A ++     L  + VL+NN G+  P   F   +DE + +   I+ VN+ G   
Sbjct: 60  TDPASFAAFLDAVEADLGPIDVLVNNAGVM-PVGPF---LDEPDAVTRRILDVNVYGVIL 115

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGA 207
            +K     M+ R +G +VN+ S A
Sbjct: 116 GSKLAAPRMVPRGRGHVVNVASLA 139

Length = 273

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 48.6 bits (116), Expect = 4e-07
 Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 10/143 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++ G    +G+   H LA+ G ++ +   N    EK+++EI     N +     Y F  
Sbjct: 5   AVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEI-----NAEYGEKAYGFGA 59

Query: 126 DVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D  +  ++ A+   +D +   V +L+ + GI   K+    + +  ++   ++VNL G   
Sbjct: 60  DATNEQSVIALSKGVDEIFKRVDLLVYSAGIA--KSAKITDFELGDFDRSLQVNLVGYFL 117

Query: 184 VTKAVLTGMMRRK-KGAIVNIGS 205
             +     M+R   +G I+ I S
Sbjct: 118 CAREFSKLMIRDGIQGRIIQINS 140

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 48.7 bits (116), Expect = 5e-07
 Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 25/155 (16%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TG + GIG+A A  LAQ G  + +   +N +  +++ N I             +   
Sbjct: 4   ALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKA------FVLQ 57

Query: 125 CDVVSAGNIKAIEMAID--GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            D+     + A+  AID     +  L+NN GI + +          E +   R+N   +T
Sbjct: 58  ADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTV-------ENLTAERINRVLST 110

Query: 183 RVT------KAVLTGMMRR---KKGAIVNIGSGAA 208
            VT      +  +  M  +     GAIVN+ S A+
Sbjct: 111 NVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAAS 145

Length = 247

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 48.5 bits (116), Expect = 5e-07
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 14/148 (9%)

Query: 65  WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           W  ITGA+ G G+A+     + G  ++  +R+   L     ++  +  +  + +     +
Sbjct: 6   W-FITGASRGFGRAWTEAALERGDRVVATARDTATL----ADLAEKYGDRLLPL-----A 55

Query: 125 CDVVS-AGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            DV   A    A+E A++    + +++NN G  Y       EV E E    +  N  G  
Sbjct: 56  LDVTDRAAVFAAVETAVEHFGRLDIVVNNAG--YGLFGMIEEVTESEARAQIDTNFFGAL 113

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            VT+AVL  +  ++ G I+ I S   I 
Sbjct: 114 WVTQAVLPYLREQRSGHIIQISSIGGIS 141

Length = 275

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 48.5 bits (116), Expect = 5e-07
 Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 20/148 (13%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           LITGA  G G+  A +LA+ G N+I   +   ++  +  E  A      + + + D +  
Sbjct: 6   LITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAE--AARRGLALRVEKLDLTDA 63

Query: 127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVR----VNLEGTT 182
           +  A   +A E  +D     VL+NN GI    A+   ++     +++VR     N+ G  
Sbjct: 64  IDRA---QAAEWDVD-----VLLNNAGIGEAGAVV--DIP----VELVRELFETNVFGPL 109

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            +T+  +  M+ R KG +V   S A ++
Sbjct: 110 ELTQGFVRKMVARGKGKVVFTSSMAGLI 137

Length = 257

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 48.2 bits (115), Expect = 7e-07
 Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 11/148 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TG   GIGK  A +LA+ G  + +   N    ++ + EI           V Y    
Sbjct: 3   ALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKA----VAY--KL 56

Query: 126 DVVSAGNI-KAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV     +  AI+ A +      V++NN G+         E+ E+E   +  VN++G   
Sbjct: 57  DVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITP--ILEITEEELKKVYNVNVKGVLF 114

Query: 184 VTKAVLTGMMRRK-KGAIVNIGSGAAIV 210
             +A      ++   G I+N  S A   
Sbjct: 115 GIQAAARQFKKQGHGGKIINAASIAGHE 142

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 8e-07
 Identities = 34/148 (22%), Positives = 56/148 (37%), Gaps = 21/148 (14%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++TG    IG A A  L   G  + +V  + +    ++  +       +   +  D
Sbjct: 6   GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATD 60

Query: 123 FSCDVVSAGNIKAIEMAIDGL-----EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVN 177
            + D        AIE A+  +      V +L+N    TY            +W+  + VN
Sbjct: 61  ITDDA-------AIERAVATVVARFGRVDILVNL-ACTYLDDGL--ASSRADWLAALDVN 110

Query: 178 LEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
           L     + +A     + R  GAIVN  S
Sbjct: 111 LVSAAMLAQAA-HPHLARGGGAIVNFTS 137

Length = 261

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 47.8 bits (114), Expect = 9e-07
 Identities = 45/155 (29%), Positives = 63/155 (40%), Gaps = 13/155 (8%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEY 121
           G  AL+TGA+ GIG+  A QL + G  + +  R    +L   + EI+A     +   V  
Sbjct: 3   GKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEAR--GGKCIPVRC 60

Query: 122 DFSCDVVSAGNIKAIEMAIDGLEVGVLINNV-----GITYPKAMFFHEVDEKEWMDIVRV 176
           D S D       + +     G  + +L+NN       I    A  F E     W DI  V
Sbjct: 61  DHSDDDEVEALFERVAREQQG-RLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNV 119

Query: 177 NLEGT--TRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
            L       V  A L  M++  KG IV I S   +
Sbjct: 120 GLRAHYACSVYAAPL--MVKAGKGLIVIISSTGGL 152

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 47.5 bits (113), Expect = 9e-07
 Identities = 31/146 (21%), Positives = 49/146 (33%), Gaps = 36/146 (24%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           +ITGA  GIG A A  L   G  +I                        I++ E D   D
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVI-----------------------GIDLREADVIAD 39

Query: 127 VVSAGNIKAIEMAIDGLEVGV---LINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           + +     A    +     GV   L+N  G+                  +++VN  G   
Sbjct: 40  LSTPEGRAAAIADVLARCSGVLDGLVNCAGVGGTTVA----------GLVLKVNYFGLRA 89

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAI 209
           + +A+L  + +    A V + S A  
Sbjct: 90  LMEALLPRLRKGHGPAAVVVSSIAGA 115

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 47.7 bits (114), Expect = 9e-07
 Identities = 46/155 (29%), Positives = 61/155 (39%), Gaps = 33/155 (21%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPN----TQINIVEYD 122
           LITG   G G   A +L   G   +L      K    + E++    +     Q+      
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGF-TVLAGCL-TKNGPGAKELRRVCSDRLRTLQL------ 55

Query: 123 FSCDVVSAGNIKAI------EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVR- 175
              DV     IK         +   GL    L+NN GI     + F   +E   MD  R 
Sbjct: 56  ---DVTKPEQIKRAAQWVKEHVGEKGL--WGLVNNAGI-----LGFGGDEELLPMDDYRK 105

Query: 176 ---VNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA 207
              VNL GT  VTKA L  ++RR KG +VN+ S  
Sbjct: 106 CMEVNLFGTVEVTKAFLP-LLRRAKGRVVNVSSMG 139

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 19/56 (33%), Positives = 32/56 (57%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           LITGA+ G+G   A + A  G +L L +R  ++LE++  E+ A  P  ++ +   D
Sbjct: 6   LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALD 61

Length = 248

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 47.9 bits (115), Expect = 1e-06
 Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 23/151 (15%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL--VSRNHNKLEKISNEIQAENPNTQINIVEYDF 123
           AL+TGA  GIG A A  LA+ G +++   V      L  ++N +                
Sbjct: 213 ALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTA-----------L 261

Query: 124 SCDVVSAGNIKAIEMAID--GLEVGVLINNVGITYPKA---MFFHEVDEKEWMDIVRVNL 178
           + D+ +      I   +      + ++++N GIT  K    M     DE  W  ++ VNL
Sbjct: 262 ALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANM-----DEARWDSVLAVNL 316

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
               R+T+A+L        G IV + S + I
Sbjct: 317 LAPLRITEALLAAGALGDGGRIVGVSSISGI 347

Length = 450

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 22/151 (14%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAENPNTQINIVEYDFS 124
           A++TG + G+G A A QL Q G+ ++ V+R+ H  L   + E  AE        VE D S
Sbjct: 4   AIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAE--------VELDLS 55

Query: 125 CDVVSAGNIKAIEMA---IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG- 180
            D  +A    A ++    +DG    +LINN G   P        D       V +N+   
Sbjct: 56  -DAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATL-DAAAIARAVGLNVAAP 113

Query: 181 ---TTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
              T  + +A      RR    I++I SGAA
Sbjct: 114 LMLTAALAQAASDAAERR----ILHISSGAA 140

Length = 243

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 47.1 bits (112), Expect = 1e-06
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 21/150 (14%)

Query: 68  ITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDV 127
           ITGA  GIG+  A   A++G  + L   + + L  ++ E+ AEN                
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAG-----------A 53

Query: 128 VSAGNIKAIEMAIDGL--EVG----VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           +   +  A   A+       G     L NN G+   +   F +V       +V +N++G 
Sbjct: 54  LDVTDRAAWAAALADFAAATGGRLDALFNNAGVG--RGGPFEDVPLAAHDRMVDINVKGV 111

Query: 182 TRVTKAVLTGMMRRKKGA-IVNIGSGAAIV 210
                A L   ++   GA ++N  S +AI 
Sbjct: 112 LNGAYAALP-YLKATPGARVINTASSSAIY 140

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 15/147 (10%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNT-QINIVEYDFSC 125
            ITGA  GIG+A A   A  G  +     N   L  ++ E+ A N  T  +++ +   + 
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRA-AW 63

Query: 126 DVVSAGNIKAIE--MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D        A+    A  G  + VL NN GI       F ++  +    ++ +N++G   
Sbjct: 64  D-------AALADFAAATGGRLDVLFNNAGILRGGP--FEDIPLEAHDRVIDINVKGVLN 114

Query: 184 VTKAVLTGMMRRKKGA-IVNIGSGAAI 209
              A L   ++   GA ++N  S +AI
Sbjct: 115 GAHAALP-YLKATPGARVINTSSASAI 140

Length = 260

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 47.0 bits (111), Expect = 2e-06
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 15/148 (10%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  ALITGA+ GIGK  A    + G  + + +R+ + LEK+++EI               
Sbjct: 9   GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKV------VP 62

Query: 123 FSCDVVS----AGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
             CDV         +  +   + G+++ V   N GI     M   ++  +E+  +   N+
Sbjct: 63  VCCDVSQHQQVTSMLDQVTAELGGIDIAVC--NAGIITVTPML--DMPLEEFQRLQNTNV 118

Query: 179 EGTTRVTKAVLTGMMRR-KKGAIVNIGS 205
            G     +A    M+++ + G I+N  S
Sbjct: 119 TGVFLTAQAAAKAMVKQGQGGVIINTAS 146

Length = 253

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.9 bits (109), Expect = 4e-06
 Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 27/162 (16%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++TGA  G+G+A A  LA+ G  ++        +  +++ + A +   +I      
Sbjct: 12  GKVAVVTGAAAGLGRAEALGLARLGATVV--------VNDVASALDASDVLDEIRAAG-- 61

Query: 123 FSCDVVSAGNI-------KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVR 175
            +  V  AG+I       + +  A+    + +++NN GIT  + M F+  DE EW  ++ 
Sbjct: 62  -AKAVAVAGDISQRATADELVATAVGLGGLDIVVNNAGITRDR-MLFNMSDE-EWDAVIA 118

Query: 176 VNLEGTTRVTKAVLTGMMRRKK-------GAIVNIGSGAAIV 210
           V+L G   +T+        + K       G IVN  S A +V
Sbjct: 119 VHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV 160

Length = 306

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 20/149 (13%)

Query: 68  ITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC-- 125
           ITGA+ GIG+A A + A+ G  L LV+R  + L+       A  P           S   
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQ----AFAARLPK------AARVSVYA 56

Query: 126 -DVVSAGNIKAIE---MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWM-DIVRVNLEG 180
            DV  A  + A     +A  GL   V+I N GI+        E ++     +++  N  G
Sbjct: 57  ADVRDADALAAAAADFIAAHGL-PDVVIANAGIS--VGTLTEEREDLAVFREVMDTNYFG 113

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
                +  +  M   ++G +V I S A +
Sbjct: 114 MVATFQPFIAPMRAARRGTLVGIASVAGV 142

Length = 257

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 45.6 bits (108), Expect = 5e-06
 Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 17/155 (10%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G   L+TG + GIG+  A    + G  +I+ +R        + E+ A      I I    
Sbjct: 6   GKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSA--YGECIAI---- 59

Query: 123 FSCDVVSAGNIKAIEMAIDGLE--VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
              D+ S   I+A+   +      + VL+NN G T+          E  W  ++ +N++ 
Sbjct: 60  -PADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAP--LEAFPESGWDKVMDINVKS 116

Query: 181 TTRVTKAVLTGMMRRKKGA-----IVNIGSGAAIV 210
              +T+A+L  ++R    A     ++NIGS A IV
Sbjct: 117 VFFLTQALLP-LLRAAATAENPARVINIGSIAGIV 150

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 7e-06
 Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 29/159 (18%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G   ++ G T GI    A   A+ G N+ + SR+  K++    ++Q   P          
Sbjct: 9   GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPE------GLG 62

Query: 123 FSCDVVSAGNIKAIEMAIDGL-----EVGVLINNVGITYP------KAMFFHEVDEKEWM 171
            S DV    +  A+E A   +      + VL++     +P       A  F  V     +
Sbjct: 63  VSADV---RDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTV-----V 114

Query: 172 DIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           DI   +L GT  V KA    ++RR   +I+ I +  A V
Sbjct: 115 DI---DLLGTFNVLKAAY-PLLRRPGASIIQISAPQAFV 149

Length = 264

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 45.2 bits (107), Expect = 9e-06
 Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 5/158 (3%)

Query: 54  RQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPN 113
           R PK        A +TG   GIG+  A +LA  G +++L   N    E ++ EI  +   
Sbjct: 405 RMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGA 464

Query: 114 TQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDI 173
            +   ++ D + +         + +A  G++  +++NN GI       F E   +EW   
Sbjct: 465 GRAVALKMDVTDEQAVKAAFADVALAYGGVD--IVVNNAGIATSSP--FEETTLQEWQLN 520

Query: 174 VRVNLEGTTRVTKAVLTGMMRRKKGA-IVNIGSGAAIV 210
           + +   G   V +     M  +  G  IV I S  A+ 
Sbjct: 521 LDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY 558

Length = 676

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 13/140 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITG + GIG+A A      G  +   +R    +E ++    A         V+ D + 
Sbjct: 4   VLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA---AA-----GFTAVQLDVND 55

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
               A   + +E    GL+V  LINN G      +    V+          N+     VT
Sbjct: 56  GAALARLAEELEAEHGGLDV--LINNAGYGAMGPLLDGGVEAMRRQ--FETNVFAVVGVT 111

Query: 186 KAVLTGMMRRKKGAIVNIGS 205
           +A+   ++RR +G +VNIGS
Sbjct: 112 RALFP-LLRRSRGLVVNIGS 130

Length = 274

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 44.4 bits (105), Expect = 1e-05
 Identities = 32/146 (21%), Positives = 66/146 (45%), Gaps = 9/146 (6%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           ++TG + GIG+       ++G  ++  +R     + + +E+    P +   +      CD
Sbjct: 13  IVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFV-----PCD 67

Query: 127 VVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
           V    +IK  I + ++    +  L+NN G  +P      E   +E+ D++ +NL      
Sbjct: 68  VTKEEDIKTLISVTVERFGRIDCLVNNAGW-HPPHQTTDETSAQEFRDLLNLNLISYFLA 126

Query: 185 TKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +K  L   +R+ +G I+N+ S    +
Sbjct: 127 SKYALP-HLRKSQGNIINLSSLVGSI 151

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 40/160 (25%), Positives = 62/160 (38%), Gaps = 39/160 (24%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G   L+TG T GIG   A      G  +++  R            +  +          +
Sbjct: 6   GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGR---------RAPETVDGRP------AE 50

Query: 123 F-SCDVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMF------FHEVDEKEW 170
           F + DV     + A+   +D +      + VL+NN G + P A+       FHE      
Sbjct: 51  FHAADVRDPDQVAAL---VDAIVERHGRLDVLVNNAGGS-PYALAAEASPRFHE------ 100

Query: 171 MDIVRVNLEGTTRVTKAVLTGMMRRKK-GAIVNIGSGAAI 209
             IV +NL     V +A    M ++   G+IVNIGS +  
Sbjct: 101 -KIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR 139

Length = 252

>gnl|CDD|236326 PRK08655, PRK08655, prephenate dehydrogenase; Provisional

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
            I G T G+GK FA  L + G  +I+  R+  K ++++ E+  E  N  I+  +     D
Sbjct: 4   SIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAK---DAD 60

Query: 127 VV 128
           +V
Sbjct: 61  IV 62

Length = 437

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 15/148 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV--SRNHNKLEKISNEIQAENPNTQI---NIVE 120
           ALITG   GIG+A A   A+ G ++ +       +  E+    I+ E     +   ++ +
Sbjct: 29  ALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLIPGDLGD 88

Query: 121 YDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
             F  D+V     + ++     L+  +L+NN    +P+     ++  ++     R N+  
Sbjct: 89  ESFCRDLVK----EVVK-EFGKLD--ILVNNAAYQHPQES-IEDITTEQLEKTFRTNIFS 140

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
              +TKA L  +  +K  +I+N  S  A
Sbjct: 141 MFYLTKAALPHL--KKGSSIINTTSVTA 166

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 6/143 (4%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TG+  G+G   A  LA  G ++++  RN   LE     ++A     +   + +D
Sbjct: 11  GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAE--ALAFD 68

Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            + +   A     I+     L+  +L+NNVG    + +   E+D+     ++  +L    
Sbjct: 69  IADEEAVAAAFARIDAEHGRLD--ILVNNVGARDRRPL--AELDDAAIRALLETDLVAPI 124

Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
            +++     M R+  G I+ I S
Sbjct: 125 LLSRLAAQRMKRQGYGRIIAITS 147

Length = 256

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 13/145 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKL-EKISNEIQAENPNTQINIVEYDFS 124
           A++TGA+ GIG A A +LA  G  + +         +++  EI+A               
Sbjct: 8   AIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAI------AVQ 61

Query: 125 CDVVSAGNI-KAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            DV  A  + +  + A      + VL+NN G+     +   + D +++   +  NL G  
Sbjct: 62  ADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTI--ADFDLEDFDRTIATNLRGAF 119

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGA 207
            V +     +   + G I+N+ +  
Sbjct: 120 VVLREAARHL--GQGGRIINLSTSV 142

Length = 245

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 24/154 (15%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK-LEKISNEIQAENPNTQINIVEYDFS 124
            +ITG + G+G+A A+QL + G ++I +SR  NK L K+     AE  N+ +     D  
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL-----AEQYNSNLTFHSLDLQ 58

Query: 125 CDVVSAGN-IKAIEMAIDGLEVG--VLINNVGITYP-KAMFFHEVDEKEWMDIVRVNLEG 180
            DV         I  +I    V    LINN G+  P K +   + + +E +  V +NL  
Sbjct: 59  -DVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPI--EKAESEELITNVHLNL-- 113

Query: 181 TTRVTKAVLTGM-MRRKKG-----AIVNIGSGAA 208
              +   +LT   M+  K       ++NI SGAA
Sbjct: 114 ---LAPMILTSTFMKHTKDWKVDKRVINISSGAA 144

Length = 251

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 26/153 (16%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAENPNTQINIVEY 121
           G  ALITG   GIG+A A   A+ G ++ +V  + H    +    ++ E           
Sbjct: 46  GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVK-------- 97

Query: 122 DFSCDVVSAGNIK-------AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDI 173
              C ++  G++        A+E  +  L  + +L+NN    YP+     ++  ++    
Sbjct: 98  ---C-LLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQS-LEDITAEQLDKT 152

Query: 174 VRVNLEGTTRVTKAVLTGMMRRKKG-AIVNIGS 205
            + N+     +TKA L  +   K+G AI+N GS
Sbjct: 153 FKTNIYSYFHMTKAALPHL---KQGSAIINTGS 182

Length = 290

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 19/154 (12%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEY 121
           G  AL+TGA+ GIG+A A +LA  G L  I       + E+   EIQ+   +       +
Sbjct: 4   GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSA------F 57

Query: 122 DFSCDVVSAGNIKAIEMAIDG--------LEVGVLINNVGITYPKAMFFHEVDEKEWMDI 173
               ++ S   ++A+  ++D          +  +LINN GI  P A F  E  E+ +  +
Sbjct: 58  SIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG-PGA-FIEETTEQFFDRM 115

Query: 174 VRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA 207
           V VN +    + +  L+ +  R    I+NI S A
Sbjct: 116 VSVNAKAPFFIIQQALSRL--RDNSRIINISSAA 147

Length = 252

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 42.5 bits (101), Expect = 3e-05
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)

Query: 67 LITGATDGIGKAFAHQLAQHG-LNLILVSRN 96
          LITG   G+G+A A  LA+ G   L+L+SR+
Sbjct: 4  LITGGLGGLGRALARWLAERGARRLVLLSRS 34

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 41.7 bits (99), Expect = 6e-05
 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 67  LITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQA-ENPNTQINIVEYDFS 124
           L+TG   G+G   A  LA+ G  +L+L+SR+     +    +   E    ++ +V    +
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVV----A 59

Query: 125 CDVVSAGNIKAIEMAIDGLE 144
           CDV    +  A+   +  + 
Sbjct: 60  CDV---SDRDAVRALLAEIR 76

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 42.5 bits (100), Expect = 6e-05
 Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 10/142 (7%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           L+T ++ GIG   A +L + G  +++ SRN   LEK   E++      +   V      D
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELK------EYGEVYA-VKAD 56

Query: 127 VVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
           +    ++K  ++ A + L  +  L+ N G    +    HE    +W++   ++L     +
Sbjct: 57  LSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYL 116

Query: 185 TKAVLTGMMRRK-KGAIVNIGS 205
           T  ++   + +K KG +V + S
Sbjct: 117 TTLLIQAWLEKKMKGVLVYLSS 138

Length = 259

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 41.9 bits (98), Expect = 7e-05
 Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 21/159 (13%)

Query: 57  KNLKSYGSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQ 115
           KNL   G  AL+TGA+ GIG+A A +LA  G L  I   RN    ++   EI++      
Sbjct: 2   KNLD--GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKA- 58

Query: 116 INIVEYDFSCDVVSAGNIKA--------IEMAIDGLEVGVLINNVGITYPKAMFFHEVDE 167
                +    D+ S   +K         +++ +   E+ +L+NN GI     +      E
Sbjct: 59  -----FLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTI--ENTTE 111

Query: 168 KEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG 206
           + + +I+ VN++    + +  L   + R +G ++NI S 
Sbjct: 112 EIFDEIMAVNIKAPFFLIQQTLP--LLRAEGRVINISSA 148

Length = 254

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 41.8 bits (99), Expect = 8e-05
 Identities = 16/43 (37%), Positives = 28/43 (65%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQA 109
           LI GAT  I +A A + A  G  L L +R+  +LE+++++++A
Sbjct: 5   LIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRA 47

Length = 243

>gnl|CDD|133446 cd01078, NAD_bind_H4MPT_DH, NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 14/49 (28%), Positives = 28/49 (57%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN 111
           G  A++ G T  +G+  A  LA+ G  ++LV R+  + +K ++ ++A  
Sbjct: 28  GKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF 76

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 194

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 15/146 (10%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           LITGA   IG A    + + G  +I    +   L ++   +  E  + ++++VE     D
Sbjct: 8   LITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE----LD 63

Query: 127 VVSAGNIKAIEMAIDGL-EVGVLINN-VGITYPK-----AMFFHEVDEKEWMDIVRVNLE 179
           +      +++E  +    E    I+  V   YP+       FF +V   ++ + + ++L 
Sbjct: 64  ITDQ---ESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFF-DVSLDDFNENLSLHLG 119

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGS 205
            +   ++       ++  G +VNI S
Sbjct: 120 SSFLFSQQFAKYFKKQGGGNLVNISS 145

Length = 256

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 40.9 bits (97), Expect = 2e-04
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 67  LITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQINI 118
           L+TG    IG     Q+ +     +IL SR+  KL +I  E++ E  + ++  
Sbjct: 2   LVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIRQELRQEYNDPKLRF 54

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 27/163 (16%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLIL---------VSRNHNKLEKISNEIQAENPN 113
           G   ++TGA  GIG+A A   A  G  +++          +   +  + + +EI A    
Sbjct: 6   GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGE 65

Query: 114 TQINIVEYDFSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMD 172
               +   D   D   A N+  ++ A++    + VL+NN GI   +      + E+EW  
Sbjct: 66  A---VANGDDIADWDGAANL--VDAAVETFGGLDVLVNNAGILRDR--MIANMSEEEWDA 118

Query: 173 IVRVNLEG---TTRVTKAVLTGMMRRKKG-----AIVNIGSGA 207
           ++ V+L+G   T R   A        K G      I+N  SGA
Sbjct: 119 VIAVHLKGHFATLRHAAAYWRA--ESKAGRAVDARIINTSSGA 159

Length = 286

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 40.7 bits (95), Expect = 2e-04
 Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 23/151 (15%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVE-- 120
           G  A+ITG   G+G+  A  LA+ G +++ V               AE P TQ  +    
Sbjct: 8   GKVAIITGCNTGLGQGMAIGLAKAGADIVGVG-------------VAEAPETQAQVEALG 54

Query: 121 ---YDFSCDVVSAGNIKAI-EMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVR 175
              +  + D++   +I +I   A++ +  + +LINN GI   + +   E   K+W D++ 
Sbjct: 55  RKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLL--EFGNKDWDDVIN 112

Query: 176 VNLEGTTRVTKAVLTGMMRRKKGA-IVNIGS 205
           +N +    +++AV    +++  G  I+NI S
Sbjct: 113 INQKTVFFLSQAVAKQFVKQGNGGKIINIAS 143

Length = 251

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 40.7 bits (95), Expect = 2e-04
 Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 30/156 (19%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  ALITG+  GIG+AFA    + G  + +   N       + EI    P          
Sbjct: 3   GKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIG---PAA------CA 53

Query: 123 FSCDVVSAGNI-KAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVR----- 175
            S DV    +I + +   +D    + +L+NN       A+F    D    +DI R     
Sbjct: 54  ISLDVTDQASIDRCVAALVDRWGSIDILVNNA------ALF----DLAPIVDITRESYDR 103

Query: 176 ---VNLEGTTRVTKAVLTGMMRRKKGA-IVNIGSGA 207
              +N+ GT  + +AV   M+ + +G  I+N+ S A
Sbjct: 104 LFAINVSGTLFMMQAVARAMIAQGRGGKIINMASQA 139

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 12/155 (7%)

Query: 56  PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQ 115
             N    G  AL+TGA  GIG   A  L   G  ++L   +  +  K++ +   EN    
Sbjct: 3   EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVA-KALGENA--- 58

Query: 116 INIVEYDFSCDVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDI 173
                +  + DV     + A    + G    +  L+ N  I  P       +    W  +
Sbjct: 59  -----WFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRV 113

Query: 174 VRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
           + VNL G   + K      +R   GAIVN+ S  A
Sbjct: 114 LAVNLTGPMLLAKHC-APYLRAHNGAIVNLASTRA 147

Length = 255

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 8/85 (9%)

Query: 67  LITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           L+TG    IG     Q+ +     +IL SR+  KL  I  E++ + P  ++      +  
Sbjct: 254 LVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRF----YIG 309

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLIN 150
           DV    +   +E A++G +V ++ +
Sbjct: 310 DV---RDRDRVERAMEGHKVDIVFH 331

Length = 588

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 23/124 (18%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
             + GAT  IG+   ++LA+ G  +I+  R     E  +  +       Q+  VE+D   
Sbjct: 3   VTVFGATGFIGRYVVNRLAKRGSQVIVPYRC----EAYARRLLVMGDLGQVLFVEFDLR- 57

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
                 + ++I  A++G    V+IN VG  Y    F  E           V++EG  R+ 
Sbjct: 58  ------DDESIRKALEG--SDVVINLVGRLYETKNFSFE----------DVHVEGPERLA 99

Query: 186 KAVL 189
           KA  
Sbjct: 100 KAAK 103

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQA 109
           AL+TG++ GIG   A  LA  G ++++  R    +  K+  EI+A
Sbjct: 9   ALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA 53

Length = 248

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIG A A +L + G  + +V  N    +  ++++  +         +     
Sbjct: 5   ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD 64

Query: 126 DVVSAGNIKAIEMAIDGL-EVGVLINNVGI 154
            V       A+   +D   ++ V++NN G+
Sbjct: 65  QVF-----AAVRQVVDTFGDLNVVVNNAGV 89

Length = 256

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 39.1 bits (91), Expect = 8e-04
 Identities = 19/62 (30%), Positives = 29/62 (46%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G   +ITGA  GIG   A   A HG ++IL  RN ++     + I  E    ++  +  D
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 123 FS 124
            +
Sbjct: 61  LA 62

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 15/153 (9%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A+ITG   GIG A   + A+ G  ++L   +   L +  N ++AE  +       + 
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDV------HG 59

Query: 123 FSCDV--VSAGNIKAIEMAIDGLEVGVLINNVGITY--PKAMFFHEVDEKEWMDIVRVNL 178
             CDV         A E       V V+ +N GI    P     H+    +W  ++ V+L
Sbjct: 60  VMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHD----DWRWVIDVDL 115

Query: 179 EGTTRVTKAVLTGMMRRKKGA-IVNIGSGAAIV 210
            G+    +A L  ++ +  G  +V   S A +V
Sbjct: 116 WGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV 148

Length = 275

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 13/108 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQ-----HGLNLILVSRNHNKLEKISNEIQAENPNT--QINI 118
            L+TGA  G+G A   +L         L LIL  RN  + E     + A +P+     + 
Sbjct: 4   VLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFDY 63

Query: 119 VEYDFSCDVVS----AGNIKAIEMAIDGLEVGVLI-NNVGITYPKAMF 161
           V  D S ++VS    A  +K     +D L +   I  N GI +  A+ 
Sbjct: 64  VLVDLS-NMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIK 110

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%)

Query: 51  TFLRQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN 96
                P  L       LITG   G+G   A  LA  G  +L+L+SR 
Sbjct: 141 ELAAAPGGLDG---TYLITGGLGGLGLLVARWLAARGARHLVLLSRR 184

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 9/146 (6%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNL-ILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           LITGA+ GIG+A A   A  G ++ I  +R+    E+ ++ +       +  +V  D + 
Sbjct: 6   LITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAV--RAAGGRACVVAGDVAN 63

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           +        A++ A   L+   L+NN GI  P +M   ++D      +   N+ G     
Sbjct: 64  EADVIAMFDAVQSAFGRLD--ALVNNAGIVAP-SMPLADMDAARLRRMFDTNVLGAYLCA 120

Query: 186 KAVLTGMMRRK---KGAIVNIGSGAA 208
           +     +   +    GAIVN+ S A+
Sbjct: 121 REAARRLSTDRGGRGGAIVNVSSIAS 146

Length = 248

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 15/146 (10%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           ++TG   GIG A + +LA+ G   ++  R+    E    E++A  P  +   V+ D + D
Sbjct: 11  IVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAE-ELRALQP--RAEFVQVDLTDD 67

Query: 127 VVSAGNIKAIEMA---IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
                 ++        IDG     L+NN G+     +   E   + ++  +  NL     
Sbjct: 68  AQCRDAVEQTVAKFGRIDG-----LVNNAGVNDGVGL---EAGREAFVASLERNLIHYYV 119

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAI 209
           +    L   ++  +GAIVNI S  A+
Sbjct: 120 MAHYCLP-HLKASRGAIVNISSKTAL 144

Length = 258

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +ITGA+ G+G   A  LA+ G ++I+  RN  K E  + E+    P     I+  D   
Sbjct: 9   VIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI--PPDSYTIIHIDLGD 66

Query: 126 -DVVSAG--NIKAIEMAIDGL 143
            D V     + +A+   +D L
Sbjct: 67  LDSVRRFVDDFRALGKPLDAL 87

Length = 322

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)

Query: 67  LITGATDGIGKAFAHQLAQH-GLNLILVSR 95
           L+TG   GIG+A A  LA+  G  L+L+ R
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGR 238

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 19/146 (13%)

Query: 68  ITGATDGIGKAFAHQLAQHGLNLILVSRN---HNKLE----KISNEIQAENPNTQINIVE 120
           ITGA+ GIGKA A + A+ G N+++ ++    H KL       + EI+A        IV+
Sbjct: 8   ITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGKALPCIVD 67

Query: 121 YDFSCDVVSAGNIKAIEM--AIDGLEVGVLINNV-GITYPKAMFFHEVDEKEWMDIVRVN 177
                D V A   KA+E    ID     +L+NN   I+    +   +   K +  ++ VN
Sbjct: 68  IRDE-DQVRAAVEKAVEKFGGID-----ILVNNASAISLTGTL---DTPMKRYDLMMGVN 118

Query: 178 LEGTTRVTKAVLTGMMRRKKGAIVNI 203
             GT   +KA L  + + K   I+N+
Sbjct: 119 TRGTYLCSKACLPYLKKSKNPHILNL 144

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRN---HNKLE 101
           G    ITGA+ GIG A A + A+ G N+++ ++    H KL 
Sbjct: 6   GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLP 47

Length = 273

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 21/152 (13%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TG+  GIG+A A +LA+ G  +++   N  K  +  NE           + E     
Sbjct: 9   VVVTGSGRGIGRAIAVRLAKEGSLVVV---NAKKRAEEMNETLKM-------VKENGGEG 58

Query: 126 DVVSA------GNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
             V A      G     +  ID      +L+NN G+       F  VD+K     +  + 
Sbjct: 59  IGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGL--FSPFLNVDDKLIDKHISTDF 116

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +     ++ +   M  R+ GAIVNI S A I 
Sbjct: 117 KSVIYCSQELAKEM--REGGAIVNIASVAGIR 146

Length = 252

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 37.2 bits (86), Expect = 0.003
 Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 43/161 (26%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++TG   G+G+  A  LA+ G +++                        INIVE  
Sbjct: 10  GKVAVVTGCDTGLGQGMALGLAEAGCDIV-----------------------GINIVEPT 46

Query: 123 FSCDVVSAG-----NIKAIEMAIDGL------------EVGVLINNVGITYPKAMFFHEV 165
            + + V+A      ++ A    IDG+             + +L+NN G+   +     E 
Sbjct: 47  ETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAI--EF 104

Query: 166 DEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGA-IVNIGS 205
            EK+W D++ +N++    +++A     + +  G  I+NI S
Sbjct: 105 SEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIAS 145

Length = 253

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 36.9 bits (86), Expect = 0.004
 Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 15/83 (18%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           L+TGAT  +G A    L     +++ + RN  K +             ++   +YD   D
Sbjct: 2   LVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKA------FAADGVEVRQGDYD---D 52

Query: 127 VVSAGNIKAIEMAIDGLEVGVLI 149
             +         A +G++  +LI
Sbjct: 53  PETLER------AFEGVDRLLLI 69

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 37.2 bits (87), Expect = 0.004
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 67  LITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQIN 117
           L+TG    IG     Q+ + G   LI+  R+ NKL ++  E+++  P+ ++ 
Sbjct: 6   LVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKLHELVRELRSRFPHDKLR 57

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	210
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.96
PRK08339	263	short chain dehydrogenase; Provisional	99.96
KOG1208	314	consensus Dehydrogenases with different specificit	99.96
KOG0725	270	consensus Reductases with broad range of substrate	99.96
PRK07062	265	short chain dehydrogenase; Provisional	99.96
PRK06139	330	short chain dehydrogenase; Provisional	99.95
PRK05876	275	short chain dehydrogenase; Provisional	99.95
PRK05854	313	short chain dehydrogenase; Provisional	99.95
PRK07063	260	short chain dehydrogenase; Provisional	99.95
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.95
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.95
PRK08862	227	short chain dehydrogenase; Provisional	99.95
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.95
PRK07478	254	short chain dehydrogenase; Provisional	99.95
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.95
PRK05867	253	short chain dehydrogenase; Provisional	99.95
PRK08303	305	short chain dehydrogenase; Provisional	99.95
PRK06114	254	short chain dehydrogenase; Provisional	99.95
PRK07791	286	short chain dehydrogenase; Provisional	99.95
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.94
PRK05872	296	short chain dehydrogenase; Provisional	99.94
PRK07109	334	short chain dehydrogenase; Provisional	99.94
PRK08589	272	short chain dehydrogenase; Validated	99.94
PRK09242	257	tropinone reductase; Provisional	99.94
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.94
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.94
PRK07825	273	short chain dehydrogenase; Provisional	99.94
PLN02253	280	xanthoxin dehydrogenase	99.94
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.94
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.94
PRK05866	293	short chain dehydrogenase; Provisional	99.94
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.94
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.94
PRK06194	287	hypothetical protein; Provisional	99.94
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.94
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.94
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.94
PRK05599	246	hypothetical protein; Provisional	99.93
PRK07677	252	short chain dehydrogenase; Provisional	99.93
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.93
PRK06197	306	short chain dehydrogenase; Provisional	99.93
PRK06398	258	aldose dehydrogenase; Validated	99.93
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.93
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK08265	261	short chain dehydrogenase; Provisional	99.93
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.93
PRK05717	255	oxidoreductase; Validated	99.93
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.93
PRK09186	256	flagellin modification protein A; Provisional	99.93
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.93
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.93
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.93
PLN00015	308	protochlorophyllide reductase	99.93
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.93
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK08251	248	short chain dehydrogenase; Provisional	99.93
PRK06125	259	short chain dehydrogenase; Provisional	99.93
PRK07035	252	short chain dehydrogenase; Provisional	99.93
PRK07024	257	short chain dehydrogenase; Provisional	99.93
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.93
PRK12747	252	short chain dehydrogenase; Provisional	99.93
PRK08278	273	short chain dehydrogenase; Provisional	99.93
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK05993	277	short chain dehydrogenase; Provisional	99.93
PRK05855	582	short chain dehydrogenase; Validated	99.93
PRK07831	262	short chain dehydrogenase; Provisional	99.93
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.93
PRK06172	253	short chain dehydrogenase; Provisional	99.93
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.93
PRK06484	520	short chain dehydrogenase; Validated	99.93
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK05650	270	short chain dehydrogenase; Provisional	99.92
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.92
PRK08643	256	acetoin reductase; Validated	99.92
PRK06182	273	short chain dehydrogenase; Validated	99.92
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.92
PRK07814	263	short chain dehydrogenase; Provisional	99.92
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.92
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.92
PRK06196	315	oxidoreductase; Provisional	99.92
PRK07576	264	short chain dehydrogenase; Provisional	99.92
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.92
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK07904	253	short chain dehydrogenase; Provisional	99.92
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.92
PRK06128	300	oxidoreductase; Provisional	99.92
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.92
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.92
PRK06180	277	short chain dehydrogenase; Provisional	99.92
PRK06484	520	short chain dehydrogenase; Validated	99.92
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK06523	260	short chain dehydrogenase; Provisional	99.92
PRK06179	270	short chain dehydrogenase; Provisional	99.92
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.92
PRK06138	252	short chain dehydrogenase; Provisional	99.92
PRK07890	258	short chain dehydrogenase; Provisional	99.92
PRK07774	250	short chain dehydrogenase; Provisional	99.92
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.92
PRK07985	294	oxidoreductase; Provisional	99.92
PRK08263	275	short chain dehydrogenase; Provisional	99.92
PRK09072	263	short chain dehydrogenase; Provisional	99.91
PRK08267	260	short chain dehydrogenase; Provisional	99.91
PRK06914	280	short chain dehydrogenase; Provisional	99.91
PRK07454	241	short chain dehydrogenase; Provisional	99.91
PRK07067	257	sorbitol dehydrogenase; Provisional	99.91
PRK12743	256	oxidoreductase; Provisional	99.91
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.91
PRK07832	272	short chain dehydrogenase; Provisional	99.91
PRK12939	250	short chain dehydrogenase; Provisional	99.91
PRK07856	252	short chain dehydrogenase; Provisional	99.91
PRK08226	263	short chain dehydrogenase; Provisional	99.91
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.91
PRK06057	255	short chain dehydrogenase; Provisional	99.91
PRK06949	258	short chain dehydrogenase; Provisional	99.91
PRK06841	255	short chain dehydrogenase; Provisional	99.91
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK06483	236	dihydromonapterin reductase; Provisional	99.91
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK08628	258	short chain dehydrogenase; Provisional	99.91
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.91
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.91
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.91
PRK07069	251	short chain dehydrogenase; Validated	99.91
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.91
PRK07775	274	short chain dehydrogenase; Provisional	99.91
PRK06482	276	short chain dehydrogenase; Provisional	99.91
PRK09134	258	short chain dehydrogenase; Provisional	99.91
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.91
PRK05875	276	short chain dehydrogenase; Provisional	99.9
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.9
PRK08703	239	short chain dehydrogenase; Provisional	99.9
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.9
PRK06500	249	short chain dehydrogenase; Provisional	99.9
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.9
PRK07201	657	short chain dehydrogenase; Provisional	99.9
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.9
PRK10538	248	malonic semialdehyde reductase; Provisional	99.9
PRK05693	274	short chain dehydrogenase; Provisional	99.9
PRK07102	243	short chain dehydrogenase; Provisional	99.9
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.9
PRK06123	248	short chain dehydrogenase; Provisional	99.9
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.89
PRK06198	260	short chain dehydrogenase; Provisional	99.89
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.89
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.89
PRK06701	290	short chain dehydrogenase; Provisional	99.89
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.89
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.89
COG1028	251	FabG Dehydrogenases with different specificities (	99.89
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK09291	257	short chain dehydrogenase; Provisional	99.89
PRK12937	245	short chain dehydrogenase; Provisional	99.89
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.89
PRK06940	275	short chain dehydrogenase; Provisional	99.89
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.89
PRK07326	237	short chain dehydrogenase; Provisional	99.89
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.89
PRK12746	254	short chain dehydrogenase; Provisional	99.89
PRK12744	257	short chain dehydrogenase; Provisional	99.88
PRK06181	263	short chain dehydrogenase; Provisional	99.88
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK07074	257	short chain dehydrogenase; Provisional	99.88
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.88
PRK12827	249	short chain dehydrogenase; Provisional	99.88
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.88
PRK06101	240	short chain dehydrogenase; Provisional	99.88
PRK05884	223	short chain dehydrogenase; Provisional	99.88
PRK12828	239	short chain dehydrogenase; Provisional	99.87
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.87
PRK06720	169	hypothetical protein; Provisional	99.87
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK12367	245	short chain dehydrogenase; Provisional	99.87
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK06924	251	short chain dehydrogenase; Provisional	99.87
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.87
PRK08324	681	short chain dehydrogenase; Validated	99.86
PRK12742	237	oxidoreductase; Provisional	99.86
PRK07023	243	short chain dehydrogenase; Provisional	99.86
PRK12829	264	short chain dehydrogenase; Provisional	99.86
PRK08264	238	short chain dehydrogenase; Validated	99.86
PRK07577	234	short chain dehydrogenase; Provisional	99.85
PRK08017	256	oxidoreductase; Provisional	99.85
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.85
PRK07060	245	short chain dehydrogenase; Provisional	99.85
PRK08177	225	short chain dehydrogenase; Provisional	99.85
PRK09135	249	pteridine reductase; Provisional	99.85
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.85
PRK06953	222	short chain dehydrogenase; Provisional	99.85
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.84
PRK07041	230	short chain dehydrogenase; Provisional	99.84
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.84
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.83
PRK07578	199	short chain dehydrogenase; Provisional	99.83
PRK07806	248	short chain dehydrogenase; Provisional	99.83
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.79
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.79
PRK08219	227	short chain dehydrogenase; Provisional	99.78
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.73
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.73
PLN03209	576	translocon at the inner envelope of chloroplast su	99.7
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.66
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.65
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.65
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.65
PLN02653	340	GDP-mannose 4,6-dehydratase	99.62
PLN02583	297	cinnamoyl-CoA reductase	99.6
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.59
PLN02240	352	UDP-glucose 4-epimerase	99.58
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.58
PLN02572	442	UDP-sulfoquinovose synthase	99.55
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.54
PLN02650	351	dihydroflavonol-4-reductase	99.53
PLN02214	342	cinnamoyl-CoA reductase	99.53
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.53
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.53
PLN00198	338	anthocyanidin reductase; Provisional	99.53
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.52
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.5
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.46
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.45
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.44
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.44
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.43
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.43
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.43
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.41
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.4
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.39
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.38
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.31
PLN02686	367	cinnamoyl-CoA reductase	99.29
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.27
PLN02427	386	UDP-apiose/xylose synthase	99.26
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.25
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.25
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.25
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.2
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.18
PLN02260	668	probable rhamnose biosynthetic enzyme	99.17
PLN02206	442	UDP-glucuronate decarboxylase	99.16
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.16
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.15
CHL00194	317	ycf39 Ycf39; Provisional	99.15
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.12
PRK05865	854	hypothetical protein; Provisional	99.12
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.1
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.09
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.09
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.09
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.08
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.08
PRK08309	177	short chain dehydrogenase; Provisional	99.03
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.03
PRK07201	657	short chain dehydrogenase; Provisional	99.02
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.96
PLN02996	491	fatty acyl-CoA reductase	98.94
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.88
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.88
PLN02503	605	fatty acyl-CoA reductase 2	98.87
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.87
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.87
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	98.85
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.82
PRK12320	699	hypothetical protein; Provisional	98.8
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	98.8
PLN02778	298	3,5-epimerase/4-reductase	98.79
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.78
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.73
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.71
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.66
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.62
PLN00016	378	RNA-binding protein; Provisional	98.56
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.47
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.45
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.44
PLN02260	668	probable rhamnose biosynthetic enzyme	98.41
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.37
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.35
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.21
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.2
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.18
PRK14982	340	acyl-ACP reductase; Provisional	98.12
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.1
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.07
PRK09620	229	hypothetical protein; Provisional	98.05
PTZ00325	321	malate dehydrogenase; Provisional	98.04
PLN00106	323	malate dehydrogenase	97.99
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.99
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.94
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.94
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.89
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.89
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	97.88
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.88
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.86
COG2910	211	Putative NADH-flavin reductase [General function p	97.79
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.78
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	97.74
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.73
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.72
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.68
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.66
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.65
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.59
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.58
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.56
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.55
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.54
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.53
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.52
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.52
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.49
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.49
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.42
PRK05086	312	malate dehydrogenase; Provisional	97.41
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.41
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.41
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.41
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.4
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.38
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.37
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	97.35
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.33
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.32
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.32
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.31
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.31
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.3
PRK14968	188	putative methyltransferase; Provisional	97.28
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.28
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.27
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.27
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	97.26
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.24
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.23
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.22
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.19
PRK06849	389	hypothetical protein; Provisional	97.16
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.13
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.12
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	97.11
PRK08223	287	hypothetical protein; Validated	97.11
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	97.1
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.07
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.06
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.04
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.03
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.03
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.03
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.03
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	97.02
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.0
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	97.0
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.97
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	96.93
COG3268	382	Uncharacterized conserved protein [Function unknow	96.93
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.92
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.92
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.91
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.86
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.84
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.81
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.79
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.77
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.77
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.75
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.73
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.73
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.71
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.7
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.7
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	96.69
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.68
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	96.65
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.64
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	96.63
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	96.63
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.62
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.62
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.61
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.61
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	96.6
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.59
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	96.58
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.57
PTZ00354	334	alcohol dehydrogenase; Provisional	96.56
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.56
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	96.56
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	96.55
PRK07411	390	hypothetical protein; Validated	96.55
PTZ00117	319	malate dehydrogenase; Provisional	96.54
PLN00203	519	glutamyl-tRNA reductase	96.54
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	96.53
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.49
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	96.49
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.48
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.46
PRK08328	231	hypothetical protein; Provisional	96.46
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.44
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.44
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	96.44
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.41
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.4
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	96.39
PLN02740	381	Alcohol dehydrogenase-like	96.38
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.36
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.36
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	96.32
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.31
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	96.3
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.29
PRK12480	330	D-lactate dehydrogenase; Provisional	96.28
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	96.27
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.26
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	96.26
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.25
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.24
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	96.24
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	96.22
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.22
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.22
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.22
PRK04148	134	hypothetical protein; Provisional	96.21
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	96.21
PRK05442	326	malate dehydrogenase; Provisional	96.19
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.16
PRK07877	722	hypothetical protein; Provisional	96.13
PRK13243	333	glyoxylate reductase; Reviewed	96.12
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.11
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.1
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.1
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.09
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.08
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	96.08
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	96.07
PLN02928	347	oxidoreductase family protein	96.07
PRK14851	679	hypothetical protein; Provisional	96.05
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	96.04
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.03
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.0
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.0
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	95.97
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.95
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	95.95
PRK14967	223	putative methyltransferase; Provisional	95.95
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.94
PRK06223	307	malate dehydrogenase; Reviewed	95.92
PRK09496	453	trkA potassium transporter peripheral membrane com	95.91
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	95.88
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.88
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.86
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.86
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.85
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.85
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.85
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.82
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.82
PLN02827	378	Alcohol dehydrogenase-like	95.82
PRK10669	558	putative cation:proton antiport protein; Provision	95.82
PRK09496	453	trkA potassium transporter peripheral membrane com	95.8
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.79
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.77
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	95.74
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.71
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.71
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	95.7
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	95.67
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	95.65
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	95.64
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	95.64
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.61
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	95.61
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	95.6
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.59
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.59
PLN02602	350	lactate dehydrogenase	95.58
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.56
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.52
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.5
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.49
PRK08655	437	prephenate dehydrogenase; Provisional	95.49
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	95.48
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	95.43
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.43

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.8e-35  Score=234.52  Aligned_cols=149  Identities=27%  Similarity=0.331  Sum_probs=138.2

Q ss_pred             CCCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHH
Q 045749           55 QPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        55 ~~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      +.+..+.+|++|+||||++|+|+++|.+|+++|++++++|.|.+..++..+++++.   ++++.+.||++++++..+..+
T Consensus        30 ~~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~---g~~~~y~cdis~~eei~~~a~  106 (300)
T KOG1201|consen   30 PKPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI---GEAKAYTCDISDREEIYRLAK  106 (300)
T ss_pred             ccchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc---CceeEEEecCCCHHHHHHHHH
Confidence            34556788999999999999999999999999999999999999999999999875   288999999999999998889


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccccC
Q 045749          135 AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV  210 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~~  210 (210)
                      +++++++  ++|+||||||+...++  +.+.++|++++++++|+.|+++++|+|+|.|.++++||||+++|++|++
T Consensus       107 ~Vk~e~G--~V~ILVNNAGI~~~~~--ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~  178 (300)
T KOG1201|consen  107 KVKKEVG--DVDILVNNAGIVTGKK--LLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLF  178 (300)
T ss_pred             HHHHhcC--CceEEEeccccccCCC--ccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhccc
Confidence            9999998  7999999999998766  7789999999999999999999999999999999999999999999974

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.4e-36  Score=239.64  Aligned_cols=149  Identities=32%  Similarity=0.450  Sum_probs=137.0

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ..++.||+|+|||||||||+++|++|+++|++++++.|..++++++.+++++..+..++.++++|++++++.+..++.+.
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            44577999999999999999999999999999999999999999999999988755579999999999999999998888


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccccC
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV  210 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~~  210 (210)
                      ++++  ++|+||||||+...  ....+.+.++++++|++|++|+++++|+++|+|++++.||||++||++|..
T Consensus        87 ~~fg--~vDvLVNNAG~~~~--~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~  155 (282)
T KOG1205|consen   87 RHFG--RVDVLVNNAGISLV--GFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM  155 (282)
T ss_pred             HhcC--CCCEEEecCccccc--cccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc
Confidence            8888  69999999999884  346788999999999999999999999999999999999999999999863

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=3.9e-35  Score=226.97  Aligned_cols=141  Identities=34%  Similarity=0.552  Sum_probs=130.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ..+|+++|||||||||.++|++|++.|++|++++|++++++++++++.+    .++.+...|++|..+.+..++.+.+++
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~~   79 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEEF   79 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence            4579999999999999999999999999999999999999999988853    578889999999988888889999888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||.....+  +.+.+.|+|++++++|++|.++.+++++|.|.+++.|+|||+||++|.
T Consensus        80 g--~iDiLvNNAGl~~g~~--~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~  144 (246)
T COG4221          80 G--RIDILVNNAGLALGDP--LDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR  144 (246)
T ss_pred             C--cccEEEecCCCCcCCh--hhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc
Confidence            8  6999999999987644  889999999999999999999999999999999999999999999985

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=3e-34  Score=227.51  Aligned_cols=145  Identities=37%  Similarity=0.548  Sum_probs=130.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .++++++|||||+|||+++|++|+++|++|++++|++++++++.+++++.+ +.++.++++|++++.+.....+++.+..
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            458999999999999999999999999999999999999999999999876 7889999999999955555444444433


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccccC
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV  210 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~~  210 (210)
                      .  +||+||||||.+..++  +.+.+.++.++++++|+.+...++++++|.|.+++.|+|||++|.+|+.
T Consensus        83 ~--~IdvLVNNAG~g~~g~--f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~  148 (265)
T COG0300          83 G--PIDVLVNNAGFGTFGP--FLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLI  148 (265)
T ss_pred             C--cccEEEECCCcCCccc--hhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcC
Confidence            3  7999999999998765  8899999999999999999999999999999999999999999999864

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=1.2e-32  Score=227.72  Aligned_cols=180  Identities=58%  Similarity=0.928  Sum_probs=153.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHH
Q 045749           28 PVSALGFIILLKHSMSLLKCIYITFLRQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      .+..+|.+++++..+..+...+..+.++.++++.+|++++||||++|||+++|++|+++|++|++++|++++++++.+++
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l   97 (320)
T PLN02780         18 VLFVLGSLSILKFFFTILNWVYVYFLRPAKNLKKYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSI   97 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
Confidence            56677888888888888888887777776666667999999999999999999999999999999999999999999998


Q ss_pred             HhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHH
Q 045749          108 QAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKA  187 (210)
Q Consensus       108 ~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  187 (210)
                      ++.+++.++..+.+|++++  ..+.++++.+.+++.++|++|||||...+...++.+.+.+++++++++|+.|++.+++.
T Consensus        98 ~~~~~~~~~~~~~~Dl~~~--~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  175 (320)
T PLN02780         98 QSKYSKTQIKTVVVDFSGD--IDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQA  175 (320)
T ss_pred             HHHCCCcEEEEEEEECCCC--cHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHH
Confidence            8766566788889999853  34556777777776678899999998754323467889999999999999999999999


Q ss_pred             HHHHhHhCCCCEEEEecccccc
Q 045749          188 VLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       188 ~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|.|++++.|+||++||.+|.
T Consensus       176 ~lp~m~~~~~g~IV~iSS~a~~  197 (320)
T PLN02780        176 VLPGMLKRKKGAIINIGSGAAI  197 (320)
T ss_pred             HHHHHHhcCCcEEEEEechhhc
Confidence            9999999989999999998874

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=9.7e-33  Score=219.72  Aligned_cols=151  Identities=41%  Similarity=0.678  Sum_probs=138.2

Q ss_pred             CCCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHH
Q 045749           55 QPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        55 ~~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      +....+..|+|++||||+.|||++.|++||++|.+|++++|++++|+.+++|+++.++ .++.++.+|++++..   ..+
T Consensus        41 ~~~~~~~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~---~ye  116 (312)
T KOG1014|consen   41 PKDLKEKLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDE---VYE  116 (312)
T ss_pred             ecchHHhcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCch---hHH
Confidence            3344446689999999999999999999999999999999999999999999999885 999999999998843   567


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          135 AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++.+.+.+.+|.+||||+|+....|..+.+.+.+.+++.+++|..++..+++.++|.|.++++|.|||+||.+|+
T Consensus       117 ~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~  191 (312)
T KOG1014|consen  117 KLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL  191 (312)
T ss_pred             HHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc
Confidence            888888888899999999999876777889999899999999999999999999999999999999999999986

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=8.1e-29  Score=186.06  Aligned_cols=143  Identities=28%  Similarity=0.378  Sum_probs=125.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +..|-+++||||++|||+++|++|.+.|-+|++++|++++++++.++      ...+....||+.|.++.++.++.+.++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~------~p~~~t~v~Dv~d~~~~~~lvewLkk~   75 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE------NPEIHTEVCDVADRDSRRELVEWLKKE   75 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc------CcchheeeecccchhhHHHHHHHHHhh
Confidence            45689999999999999999999999999999999999999887765      456777889999999999999999998


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccccC
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV  210 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~~  210 (210)
                      ++  .++++|||||+.......-.+...++.++.+++|+.+|+++++.++|++++++.+.|||+||..|++
T Consensus        76 ~P--~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv  144 (245)
T COG3967          76 YP--NLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV  144 (245)
T ss_pred             CC--chheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC
Confidence            88  6999999999987643222345677788999999999999999999999999999999999998864

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.6e-28  Score=195.87  Aligned_cols=145  Identities=27%  Similarity=0.418  Sum_probs=125.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.. +.++.++.+|++++.+.++.++++. 
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~-   81 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK-   81 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH-
Confidence            34679999999999999999999999999999999999999888888876543 4567889999999977777776664 


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||.....  ++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||.++.
T Consensus        82 ~~g--~iD~lv~nag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~  148 (263)
T PRK08339         82 NIG--EPDIFFFSTGGPKPG--YFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIK  148 (263)
T ss_pred             hhC--CCcEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcccc
Confidence            344  699999999986543  3778999999999999999999999999999998888999999998764

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=1.1e-28  Score=201.79  Aligned_cols=145  Identities=28%  Similarity=0.349  Sum_probs=130.9

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ..+..|++++||||++|||+++|++|+++|++|++.+|+.++.+++.+++.+..+..++.++++|+++..++....+.+.
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            44567999999999999999999999999999999999999999999999887778899999999999988888777777


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +...  ++|++|||||+..+..    ..+.|.++.+|.+|++|++.+++.++|.|+++..+|||++||..+
T Consensus       110 ~~~~--~ldvLInNAGV~~~~~----~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~  174 (314)
T KOG1208|consen  110 KKEG--PLDVLINNAGVMAPPF----SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG  174 (314)
T ss_pred             hcCC--CccEEEeCcccccCCc----ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence            6655  7999999999987643    668889999999999999999999999999888899999999764

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.96  E-value=1.1e-27  Score=193.10  Aligned_cols=149  Identities=26%  Similarity=0.353  Sum_probs=129.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .++.||+++||||++|||+++|++|++.|++|++++|+++++++..+++..... +.++..+.+|+++++..++.++...
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            457799999999999999999999999999999999999999999888876532 4678999999999988888888877


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhh-HHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE-GTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~-g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +++.+ ++|+||||||...... +..+.++|+|+++|++|+. +.+.+.+.+.|++.+++.|+|+++||.++.
T Consensus        84 ~~~~G-kidiLvnnag~~~~~~-~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~  154 (270)
T KOG0725|consen   84 EKFFG-KIDILVNNAGALGLTG-SILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGV  154 (270)
T ss_pred             HHhCC-CCCEEEEcCCcCCCCC-ChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccc
Confidence            77432 7999999999987643 5789999999999999999 577777777787777788999999999875

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.5e-27  Score=192.07  Aligned_cols=146  Identities=22%  Similarity=0.332  Sum_probs=130.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+++.++..+++|++++++..+.++++.+.
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            45699999999999999999999999999999999999999988888877666668889999999998888877777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||.++.
T Consensus        85 ~g--~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  150 (265)
T PRK07062         85 FG--GVDMLVNNAGQGRVST--FADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLAL  150 (265)
T ss_pred             cC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEecccccc
Confidence            76  6999999999865433  778899999999999999999999999999998888999999998774

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.1e-27  Score=196.13  Aligned_cols=143  Identities=25%  Similarity=0.345  Sum_probs=127.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++.++.+|++++++.++.++++.+.+
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            45899999999999999999999999999999999999999988888764  5577888999999877777777776665


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.+++++++++|+.|++++++.++|+|++++.|+||++||.++.
T Consensus        83 g--~iD~lVnnAG~~~~~~--~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~  147 (330)
T PRK06139         83 G--RIDVWVNNVGVGAVGR--FEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGF  147 (330)
T ss_pred             C--CCCEEEECCCcCCCCC--cccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhc
Confidence            5  6999999999876544  778999999999999999999999999999999888999999998764

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.3e-27  Score=191.44  Aligned_cols=143  Identities=24%  Similarity=0.323  Sum_probs=126.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.||+++||||++|||+++|++|+++|++|++++|+++++++..++++..  +.++.++.+|++++.+..+.++++.+.+
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999999988888887654  4567888999999988888777777776


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.++|++++++|+.|++++++.++|.|.+++ +|+||++||.+++
T Consensus        82 g--~id~li~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~  147 (275)
T PRK05876         82 G--HVDVVFSNAGIVVGGP--IVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL  147 (275)
T ss_pred             C--CCCEEEECCCcCCCCC--cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhc
Confidence            6  6999999999876544  77899999999999999999999999999998776 6899999998875

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.2e-27  Score=195.81  Aligned_cols=145  Identities=25%  Similarity=0.297  Sum_probs=126.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .+++||+++||||++|||+++|++|+++|++|++++|++++.++..+++.+..++.++.++.+|+++..+.++.++++.+
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999999999999988887766666788999999999888887777776


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ..+  ++|+||||||.... +  ..+.+.++++.++++|+.|++.+++.++|.|+++ .|+||++||.++.
T Consensus        90 ~~~--~iD~li~nAG~~~~-~--~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~  154 (313)
T PRK05854         90 EGR--PIHLLINNAGVMTP-P--ERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAAR  154 (313)
T ss_pred             hCC--CccEEEECCccccC-C--ccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhc
Confidence            665  79999999998653 2  3356889999999999999999999999998765 6899999998753

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.2e-27  Score=188.96  Aligned_cols=145  Identities=31%  Similarity=0.445  Sum_probs=127.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+...+.++.++++|++++.+..+.++++.+.+
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999999999998888888764345678889999999988888788887777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  ..+.+.++|++++++|+.++++++++++|+|++++.|+||++||.++.
T Consensus        85 g--~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  149 (260)
T PRK07063         85 G--PLDVLVNNAGINVFAD--PLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAF  149 (260)
T ss_pred             C--CCcEEEECCCcCCCCC--hhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhc
Confidence            6  6999999999865433  557889999999999999999999999999998888999999998764

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.95  E-value=6.5e-27  Score=186.61  Aligned_cols=145  Identities=23%  Similarity=0.274  Sum_probs=126.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ....+|.|+|||+.||+|+.+|++|.++|++|.+.+.+++..+.+..+.+    ..+...++.|+++++++++..+.+.+
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~  100 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKK  100 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHH
Confidence            34668999999999999999999999999999999988888777666654    45677889999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+++..+..||||||+... .++.+..+.+++++++++|++|++.+++.++|.+++ .+|||||+||+.|-
T Consensus       101 ~l~~~gLwglVNNAGi~~~-~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~-arGRvVnvsS~~GR  169 (322)
T KOG1610|consen  101 HLGEDGLWGLVNNAGISGF-LGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRR-ARGRVVNVSSVLGR  169 (322)
T ss_pred             hcccccceeEEeccccccc-cCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHh-ccCeEEEecccccC
Confidence            9988789999999997654 244778899999999999999999999999996654 46999999999885

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.95  E-value=1.8e-27  Score=177.44  Aligned_cols=143  Identities=23%  Similarity=0.369  Sum_probs=124.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++.|.++||||++|||+++++.|+++|++|++.+++....++....+..   ..+...+.||+++..+.+..+++..+.+
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g---~~~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG---YGDHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC---CCccceeeeccCcHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999999888887777643   2466788999999988888788888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhH--hCCCCEEEEeccccccC
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMM--RRKKGAIVNIGSGAAIV  210 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~--~~~~g~iv~isS~ag~~  210 (210)
                      +  ++++||||||+.....  +..++.|+|++.+++|+.|.|+++|++.+.|.  ++++++|||+||+.|.+
T Consensus        89 g--~psvlVncAGItrD~~--Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGki  156 (256)
T KOG1200|consen   89 G--TPSVLVNCAGITRDGL--LLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKI  156 (256)
T ss_pred             C--CCcEEEEcCccccccc--eeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccc
Confidence            8  7999999999987654  77899999999999999999999999999844  33445999999998863

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.6e-26  Score=182.56  Aligned_cols=145  Identities=21%  Similarity=0.223  Sum_probs=124.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.+...+.+|++++++.++.++++.+.
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence            356999999999999999999999999999999999999999988888765  345777889999887777777777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag  208 (210)
                      ++. ++|++|||||.... +.++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ +|+||++||..+
T Consensus        80 ~g~-~iD~li~nag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~  147 (227)
T PRK08862         80 FNR-APDVLVNNWTSSPL-PSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD  147 (227)
T ss_pred             hCC-CCCEEEECCccCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC
Confidence            763 59999999986433 23477889999999999999999999999999998764 699999999765

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.95  E-value=1e-26  Score=186.14  Aligned_cols=142  Identities=23%  Similarity=0.384  Sum_probs=119.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|++.  ++..+++++.  +.++.++.+|++++.+.++.++++.+.
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVEV   80 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence            456999999999999999999999999999999998643  3333444433  457888999999998888877877777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.++|++++++|+.+++.++++++|+|++++ +|+||++||.++.
T Consensus        81 ~g--~iD~lv~~ag~~~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~  147 (251)
T PRK12481         81 MG--HIDILINNAGIIRRQD--LLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSF  147 (251)
T ss_pred             cC--CCCEEEECCCcCCCCC--cccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhc
Confidence            76  6999999999876543  67889999999999999999999999999998765 5899999998764

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.3e-26  Score=185.43  Aligned_cols=145  Identities=21%  Similarity=0.304  Sum_probs=126.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++.++.+|++++++.++.++++.+.
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVER   80 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            356899999999999999999999999999999999999998888887664  456788899999998888878888777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||..... .++.+.+.++|++++++|+.+++++++.++|.|++++.|+||++||.++.
T Consensus        81 ~~--~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~  147 (254)
T PRK07478         81 FG--GLDIAFNNAGTLGEM-GPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGH  147 (254)
T ss_pred             cC--CCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhh
Confidence            76  699999999986431 23668899999999999999999999999999999888999999998764

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.95  E-value=9.7e-27  Score=190.53  Aligned_cols=146  Identities=14%  Similarity=0.190  Sum_probs=115.2

Q ss_pred             cccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhC-------CCc----eeEEEEEec--
Q 045749           59 LKSYGSWALITGA--TDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN-------PNT----QINIVEYDF--  123 (210)
Q Consensus        59 ~~~~gk~vlITGa--ssGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~-------~~~----~~~~~~~D~--  123 (210)
                      .+++||+++||||  ++|||+++|+.|+++|++|++ +|+.++++++.+++++..       +..    ....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4477999999999  899999999999999999999 889888888887775310       111    146778898  


Q ss_pred             ccCc------------------cchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHH
Q 045749          124 SCDV------------------VSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT  185 (210)
Q Consensus       124 ~~~~------------------~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  185 (210)
                      ++.+                  +.++.++++.+.++  ++|+||||||.......++.+.+.|+|+++|++|+.|+++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G--~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~  161 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFG--SIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLL  161 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcC--CCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            4333                  34455556666665  699999999864321234788999999999999999999999


Q ss_pred             HHHHHHhHhCCCCEEEEecccccc
Q 045749          186 KAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       186 ~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      |.++|.|+++  |+|||+||.++.
T Consensus       162 ~~~~p~m~~~--G~II~isS~a~~  183 (303)
T PLN02730        162 QHFGPIMNPG--GASISLTYIASE  183 (303)
T ss_pred             HHHHHHHhcC--CEEEEEechhhc
Confidence            9999999654  999999998764

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.7e-26  Score=184.73  Aligned_cols=143  Identities=24%  Similarity=0.361  Sum_probs=125.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++||+++||||++|||++++++|+++|++|++++|+++++++..++++..  +.++..+.+|++++.+..+.++++.+.+
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            56999999999999999999999999999999999999988888887664  3567888999999988888888888777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.++|++++++|+.++++++++++|.|.+++ .|+||++||.++.
T Consensus        85 g--~id~lv~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  150 (253)
T PRK05867         85 G--GIDIAVCNAGIITVTP--MLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGH  150 (253)
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhc
Confidence            6  6999999999875543  67889999999999999999999999999998765 5799999998763

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.1e-26  Score=189.33  Aligned_cols=145  Identities=21%  Similarity=0.298  Sum_probs=121.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh----------hHHHHHHHHHHhhCCCceeEEEEEecccCccc
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH----------NKLEKISNEIQAENPNTQINIVEYDFSCDVVS  129 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~----------~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~  129 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+.          ++++++.++++..  +.++.++++|++++.+.
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v   82 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPEQV   82 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHHHH
Confidence            35699999999999999999999999999999999984          4566666666543  44577889999999888


Q ss_pred             hhhHHHHHHHhcCCCccEEEEcC-CCCC--CCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          130 AGNIKAIEMAIDGLEVGVLINNV-GITY--PKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       130 ~~~~~~~~~~~~~~~id~lvnnA-g~~~--~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      ++.++++.+.++  ++|++|||| |...  ....++.+.+.++|++++++|+.++++++++++|+|.+++.|+||++||.
T Consensus        83 ~~~~~~~~~~~g--~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~  160 (305)
T PRK08303         83 RALVERIDREQG--RLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDG  160 (305)
T ss_pred             HHHHHHHHHHcC--CccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCc
Confidence            888888887776  699999999 7531  11123667889999999999999999999999999988878999999997


Q ss_pred             cc
Q 045749          207 AA  208 (210)
Q Consensus       207 ag  208 (210)
                      ++
T Consensus       161 ~~  162 (305)
T PRK08303        161 TA  162 (305)
T ss_pred             cc
Confidence            54

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.5e-26  Score=183.99  Aligned_cols=147  Identities=25%  Similarity=0.395  Sum_probs=126.1

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh-HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN-KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~-~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      +.++++||+++||||++|||+++|++|+++|++|++++|+.+ .+++..++++..  +.++..+.+|++++.+..+.+++
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~   79 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVAR   79 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHH
Confidence            345577999999999999999999999999999999999764 456666777654  44677889999999888887777


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.+.++  ++|++|||||.....+  +.+.+.++|++++++|+.|++.++++++|.|++++.|+||++||.++.
T Consensus        80 ~~~~~g--~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  149 (254)
T PRK06114         80 TEAELG--ALTLAVNAAGIANANP--AEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGI  149 (254)
T ss_pred             HHHHcC--CCCEEEECCCCCCCCC--hHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhc
Confidence            777776  6999999999876533  678899999999999999999999999999998888999999998764

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.3e-26  Score=187.46  Aligned_cols=143  Identities=24%  Similarity=0.330  Sum_probs=123.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh---------hHHHHHHHHHHhhCCCceeEEEEEecccCccchh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH---------NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAG  131 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~---------~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~  131 (210)
                      ++||+++||||++|||+++|++|+++|++|++++|+.         +++++..++++..  +.++..+.+|++++++..+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~   81 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAAN   81 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHHH
Confidence            4589999999999999999999999999999999876         6777777777654  4567788999999988888


Q ss_pred             hHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC------CCEEEEecc
Q 045749          132 NIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK------KGAIVNIGS  205 (210)
Q Consensus       132 ~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~------~g~iv~isS  205 (210)
                      .++++.+.++  ++|++|||||.....  ++.+.+.++|++++++|+.|+++++|+++|+|+++.      .|+||++||
T Consensus        82 ~~~~~~~~~g--~id~lv~nAG~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS  157 (286)
T PRK07791         82 LVDAAVETFG--GLDVLVNNAGILRDR--MIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSS  157 (286)
T ss_pred             HHHHHHHhcC--CCCEEEECCCCCCCC--CcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCc
Confidence            8888877776  699999999987553  377899999999999999999999999999997642      379999999


Q ss_pred             cccc
Q 045749          206 GAAI  209 (210)
Q Consensus       206 ~ag~  209 (210)
                      .++.
T Consensus       158 ~~~~  161 (286)
T PRK07791        158 GAGL  161 (286)
T ss_pred             hhhC
Confidence            8764

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=2.6e-26  Score=186.13  Aligned_cols=142  Identities=15%  Similarity=0.214  Sum_probs=115.4

Q ss_pred             cCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++||+++||||+  +|||+++|++|+++|++|++++|+++ .++..+++.+.. +.. .++++|+++.++.++.++++.+
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~-~~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQEL-GSD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhc-CCc-eEEEecCCCHHHHHHHHHHHHH
Confidence            458999999997  89999999999999999999999853 233334443332 223 5788999999888888888887


Q ss_pred             HhcCCCccEEEEcCCCCCCC--cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPK--AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||...+.  ..++.+.+.++|++++++|+.|++++++.++|.|.+  +|+||++||.++.
T Consensus        80 ~~g--~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~  148 (274)
T PRK08415         80 DLG--KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGV  148 (274)
T ss_pred             HcC--CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCc
Confidence            776  699999999985421  134678899999999999999999999999999964  4899999998764

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.4e-26  Score=187.33  Aligned_cols=143  Identities=24%  Similarity=0.377  Sum_probs=124.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .++.||+++||||++|||+++|++|+++|++|++++|++++++++.+++..   +..+..+.+|++++++.++.++++.+
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVE   81 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            346699999999999999999999999999999999999988887777642   44567778999999888887788777


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||.....+  +.+.+.++|++++++|+.|++++++.++|+|.++ .|+||++||.++.
T Consensus        82 ~~g--~id~vI~nAG~~~~~~--~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~  147 (296)
T PRK05872         82 RFG--GIDVVVANAGIASGGS--VAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAF  147 (296)
T ss_pred             HcC--CCCEEEECCCcCCCcC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhc
Confidence            776  6999999999876543  7789999999999999999999999999999775 4899999998764

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.6e-26  Score=190.17  Aligned_cols=143  Identities=27%  Similarity=0.382  Sum_probs=127.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++..+.+|++++++.++.++.+.+.+
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            45899999999999999999999999999999999999999888888764  4578889999999988887777777777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.+++++++++|+.|++++++.++|+|++++.|+||++||.++.
T Consensus        84 g--~iD~lInnAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~  148 (334)
T PRK07109         84 G--PIDTWVNNAMVTVFGP--FEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAY  148 (334)
T ss_pred             C--CCCEEEECCCcCCCCc--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhc
Confidence            6  6999999999865543  678899999999999999999999999999999888999999998764

>PRK08589 short chain dehydrogenase; Validated

Probab=99.94  E-value=5.4e-26  Score=183.95  Aligned_cols=142  Identities=28%  Similarity=0.341  Sum_probs=123.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.||+++||||++|||+++|++|+++|++|++++|+ +++++..+++++.  +.++..+.+|++++.+..+.++++.+.+
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            458999999999999999999999999999999999 7788877777654  4568889999999988888888888777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||..... .++.+.+.++|++++++|+.|++++++.++|+|++++ |+||++||.++.
T Consensus        81 g--~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~  145 (272)
T PRK08589         81 G--RVDVLFNNAGVDNAA-GRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQ  145 (272)
T ss_pred             C--CcCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhc
Confidence            7  699999999986431 2366789999999999999999999999999998775 999999998764

>PRK09242 tropinone reductase; Provisional

Probab=99.94  E-value=1.1e-25  Score=180.37  Aligned_cols=147  Identities=29%  Similarity=0.408  Sum_probs=130.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++.||+++||||++|||++++++|+++|++|++++|+.+++++..+++....++.++..+.+|++++.+.++.++++.+
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED   84 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            34669999999999999999999999999999999999999988888887765567888999999999888887888877


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||.....+  ..+.+.++|++.+++|+.|++.++++++|+|.+++.|+||++||.++.
T Consensus        85 ~~g--~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~  151 (257)
T PRK09242         85 HWD--GLHILVNNAGGNIRKA--AIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGL  151 (257)
T ss_pred             HcC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccC
Confidence            776  6999999999865433  668899999999999999999999999999998888999999998764

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=6.2e-26  Score=183.63  Aligned_cols=142  Identities=14%  Similarity=0.207  Sum_probs=115.8

Q ss_pred             cCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGATD--GIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGass--GiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++||+++||||++  |||+++|++|+++|++|++++|+++..++ .+++.+.. +. ...+++|+++..+.++.++++.+
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~-g~-~~~~~~Dv~d~~~v~~~~~~~~~   81 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESL-GS-DFVLPCDVEDIASVDAVFEALEK   81 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhc-CC-ceEEeCCCCCHHHHHHHHHHHHH
Confidence            4689999999996  99999999999999999999998654333 33443322 22 24688999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCc--ccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKA--MFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||.....+  .++.+.+.++|++++++|+.++++++|+++|+|.+  +|+||++||.++.
T Consensus        82 ~~g--~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~  150 (271)
T PRK06505         82 KWG--KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGST  150 (271)
T ss_pred             HhC--CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCcc
Confidence            777  6999999999864321  24678899999999999999999999999999963  4899999998764

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.94  E-value=9.4e-26  Score=169.36  Aligned_cols=136  Identities=35%  Similarity=0.487  Sum_probs=121.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC--hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL-NLILVSRN--HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~--~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      |+++||||++|||++++++|+++|+ +|++++|+  .+..+++.++++..  +.++.++++|++++++.++.++.+.+..
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence            7899999999999999999999966 68889999  77788888888855  5889999999999988888888888777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.|+|+++|++|+.+++++.|.++|    ++.|+||++||.+|.
T Consensus        79 ~--~ld~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~  139 (167)
T PF00106_consen   79 G--PLDILINNAGIFSDGS--LDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGV  139 (167)
T ss_dssp             S--SESEEEEECSCTTSBS--GGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGT
T ss_pred             c--cccccccccccccccc--cccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhc
Confidence            6  6999999999987544  78889999999999999999999999999    457999999999875

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.2e-25  Score=181.68  Aligned_cols=140  Identities=25%  Similarity=0.285  Sum_probs=122.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+++++||||++|||++++++|+++|++|++++|+++++++..+++.      ++.++.+|++++++..+.++.+.+.
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~   75 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEAD   75 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHHH
Confidence            3458999999999999999999999999999999999988877665542      4667889999987777777777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.+++++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        76 ~~--~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  141 (273)
T PRK07825         76 LG--PIDVLVNNAGVMPVGP--FLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGK  141 (273)
T ss_pred             cC--CCCEEEECCCcCCCCc--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCcccc
Confidence            65  6999999999876543  678899999999999999999999999999999999999999998764

>PLN02253 xanthoxin dehydrogenase

Probab=99.94  E-value=1.7e-25  Score=181.45  Aligned_cols=145  Identities=21%  Similarity=0.344  Sum_probs=124.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|+++..++..+++..   +.++.++++|++++.+.++.++.+.+.
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~~   91 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTVDK   91 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            45699999999999999999999999999999999998877766665522   356888999999998888877888777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||........+.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||.++.
T Consensus        92 ~g--~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~  159 (280)
T PLN02253         92 FG--TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASA  159 (280)
T ss_pred             hC--CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhc
Confidence            76  699999999986543234678899999999999999999999999999988888999999998764

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=1.4e-25  Score=180.30  Aligned_cols=144  Identities=13%  Similarity=0.108  Sum_probs=115.8

Q ss_pred             cccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           59 LKSYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        59 ~~~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+++..+ ..+++.+..  ....++++|++++.+.++.++++
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~   82 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEEL--DAPIFLPLDVREPGQLEAVFARI   82 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhh--ccceEEecCcCCHHHHHHHHHHH
Confidence            44679999999998  59999999999999999999999864322 223333322  12457889999998888888888


Q ss_pred             HHHhcCCCccEEEEcCCCCCCC--cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPK--AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+.++  ++|++|||||.....  ..++.+.+.++|+++|++|+.|++++++.++|+|++  +|+||++||.++.
T Consensus        83 ~~~~g--~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~  153 (258)
T PRK07533         83 AEEWG--RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAE  153 (258)
T ss_pred             HHHcC--CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccc
Confidence            88776  699999999986431  133678899999999999999999999999999953  5899999998763

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=7.4e-26  Score=181.28  Aligned_cols=140  Identities=12%  Similarity=0.153  Sum_probs=116.5

Q ss_pred             cCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +.||+++||||+  +|||+++|++|+++|++|++++|++ +.++..+++.    ..+...+++|++++++.++.++++.+
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFATIKE   79 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHHHH
Confidence            468999999999  8999999999999999999999984 4444434432    23577889999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCC--cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPK--AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||...+.  ..++.+.+.|+|++.+++|+.+++++++.++|+|.+  +|+||++||.++.
T Consensus        80 ~~g--~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~  148 (252)
T PRK06079         80 RVG--KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSE  148 (252)
T ss_pred             HhC--CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCcc
Confidence            776  699999999986531  134678899999999999999999999999999853  4899999998763

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.94  E-value=4.5e-25  Score=180.53  Aligned_cols=146  Identities=25%  Similarity=0.387  Sum_probs=124.2

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ...++.+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++++|++++.+..+.++.+
T Consensus        34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~  111 (293)
T PRK05866         34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADV  111 (293)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            345567899999999999999999999999999999999999988888887654  446778899999987777777777


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCC--CHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEV--DEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~--~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .+.++  ++|++|||||.....+  +.+.  +.+++++++++|+.|++.++++++|+|++++.|+||++||.++
T Consensus       112 ~~~~g--~id~li~~AG~~~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  181 (293)
T PRK05866        112 EKRIG--GVDILINNAGRSIRRP--LAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGV  181 (293)
T ss_pred             HHHcC--CCCEEEECCCCCCCcc--hhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhh
Confidence            77766  6999999999876543  3332  4578999999999999999999999999988899999999754

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.94  E-value=8.8e-26  Score=181.47  Aligned_cols=144  Identities=17%  Similarity=0.189  Sum_probs=117.7

Q ss_pred             ccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChh--HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           60 KSYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHN--KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        60 ~~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~--~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      ++.||+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++.+..  ....++++|++++++.++.+++
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~   80 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL--NPSLFLPCDVQDDAQIEETFET   80 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc--CcceEeecCcCCHHHHHHHHHH
Confidence            3569999999986  89999999999999999999876543  3455555665432  3466788999999888888888


Q ss_pred             HHHHhcCCCccEEEEcCCCCCC--CcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYP--KAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.+.++  ++|++|||||....  ...++.+.+.++|++++++|+.|+++++|.++|.|.+  +|+||++||.++.
T Consensus        81 ~~~~~g--~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~  152 (258)
T PRK07370         81 IKQKWG--KLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGV  152 (258)
T ss_pred             HHHHcC--CCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccc
Confidence            888776  69999999997642  1134678899999999999999999999999999964  4899999998764

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.94  E-value=1.6e-25  Score=184.86  Aligned_cols=143  Identities=18%  Similarity=0.237  Sum_probs=120.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++|+++||||++|||+++|++|+++| ++|++++|++++++++.+++..  ++..+..+.+|+++..+.++.++++.+..
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM--PKDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999 9999999999988887777643  24567788999999987887777776655


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC--CCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK--KGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~--~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||+..+. ....+.+.++|++++++|+.|++++++.++|+|++++  .|+||++||.++.
T Consensus        80 ~--~iD~lI~nAG~~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~  147 (314)
T TIGR01289        80 R--PLDALVCNAAVYFPT-AKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGN  147 (314)
T ss_pred             C--CCCEEEECCCccccC-ccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccc
Confidence            4  699999999975432 1234678999999999999999999999999998764  5899999998763

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06194 hypothetical protein; Provisional

Probab=99.94  E-value=2.2e-25  Score=181.39  Aligned_cols=143  Identities=29%  Similarity=0.341  Sum_probs=124.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|+++..+.++.++.+.+.+
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999988888887777654  4578889999999877777777777766


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCC------CEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK------GAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~------g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.++|++++++|+.|+++++++++|.|+++..      |+||++||.++.
T Consensus        82 g--~id~vi~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  152 (287)
T PRK06194         82 G--AVHLLFNNAGVGAGGL--VWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL  152 (287)
T ss_pred             C--CCCEEEECCCCCCCCC--cccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc
Confidence            6  6999999999976543  667899999999999999999999999999988764      799999998764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=2.2e-25  Score=179.35  Aligned_cols=142  Identities=17%  Similarity=0.192  Sum_probs=116.0

Q ss_pred             cCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGATD--GIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGass--GiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++||+++||||++  |||+++|++|+++|++|++.+|++ +.++..+++.+.. +.. ..+++|++++.+.++.++++.+
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~-g~~-~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI-GCN-FVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc-CCc-eEEEccCCCHHHHHHHHHHHHH
Confidence            4589999999997  999999999999999999999884 4444555565432 222 4578999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCC--cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPK--AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||.....  ..++.+.+.++|++++++|+.+++.++++++|+|.+  +|+||++||.++.
T Consensus        83 ~~g--~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~  151 (260)
T PRK06603         83 KWG--SFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAE  151 (260)
T ss_pred             HcC--CccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccc
Confidence            776  699999999975421  123678899999999999999999999999999853  5899999998763

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.94  E-value=2.6e-25  Score=177.95  Aligned_cols=143  Identities=31%  Similarity=0.452  Sum_probs=125.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++||||++|||+++|++|+++|++|++++|+++++++..++++..  +.++..+.+|++++++..+.++.+.+.
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            356999999999999999999999999999999999999888888887654  456778889999987777777777766


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++  ++|++|||||.....+  +.+.+.++|++++++|+.+++.+++.++|.|.+++.|+||++||..+
T Consensus        84 ~~--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  148 (254)
T PRK08085         84 IG--PIDVLINNAGIQRRHP--FTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQS  148 (254)
T ss_pred             cC--CCCEEEECCCcCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchh
Confidence            66  6999999999865433  67889999999999999999999999999998888899999999865

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.94  E-value=2e-25  Score=179.42  Aligned_cols=147  Identities=20%  Similarity=0.272  Sum_probs=123.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++||+++||||++|||+++|++|+++|++|++++| +++++++..++++... +.++.++++|++++++.++.++++.+
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            356999999999999999999999999999998865 5667777777775532 45788999999999888888888877


Q ss_pred             HhcCCCccEEEEcCCCCCC----CcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYP----KAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||....    ...++.+.+.+++++++++|+.+++.+++.++|.|++++.|+||++||.++.
T Consensus        84 ~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  156 (260)
T PRK08416         84 DFD--RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNL  156 (260)
T ss_pred             hcC--CccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccc
Confidence            776  69999999987532    1123667889999999999999999999999999988888999999998764

>PRK05599 hypothetical protein; Provisional

Probab=99.93  E-value=3e-25  Score=177.15  Aligned_cols=140  Identities=19%  Similarity=0.268  Sum_probs=120.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      ++++||||++|||+++|++|+ +|++|++++|++++++++.+++++.+ ...+.++++|++++++.++.++++.+.++  
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--   76 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAG--   76 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcC--
Confidence            479999999999999999999 59999999999999999988887653 33577889999999888888888877766  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      ++|++|||||.....+  ..+.+.+++++++++|+.+++++++.++|.|.+++ +|+||++||.+|.
T Consensus        77 ~id~lv~nag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~  141 (246)
T PRK05599         77 EISLAVVAFGILGDQE--RAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGW  141 (246)
T ss_pred             CCCEEEEecCcCCCch--hhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccc
Confidence            6999999999865432  45677788899999999999999999999998764 6999999999875

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.1e-25  Score=176.71  Aligned_cols=141  Identities=26%  Similarity=0.376  Sum_probs=122.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      ||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++++.+.++.++++.+.++ 
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   77 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFG-   77 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhC-
Confidence            589999999999999999999999999999999998888877777654  35688899999998888887777777776 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                       ++|++|||||.....  ++.+.+.++|++++++|+.|+++++++++|+|.+++ +|+||++||.++.
T Consensus        78 -~id~lI~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~  142 (252)
T PRK07677         78 -RIDALINNAAGNFIC--PAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAW  142 (252)
T ss_pred             -CccEEEECCCCCCCC--CcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhc
Confidence             699999999975432  367889999999999999999999999999987653 6899999998764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=2.3e-25  Score=179.30  Aligned_cols=143  Identities=20%  Similarity=0.222  Sum_probs=115.2

Q ss_pred             cCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGA--TDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGa--ssGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++||+++||||  ++|||+++|++|+++|++|++++|++ +.++..+++....+  ....+++|++++++.++.++++.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELD--SELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccC--CceEEECCCCCHHHHHHHHHHHHH
Confidence            46899999997  67999999999999999999998864 34444455544322  245788999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCc---ccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKA---MFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||+.....   ..+.+.+.++|++++++|+.++++++|+++|.|+++ +|+||++||.++.
T Consensus        81 ~~g--~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~  151 (261)
T PRK08690         81 HWD--GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAV  151 (261)
T ss_pred             HhC--CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccc
Confidence            776  6999999999864321   113567889999999999999999999999988655 4899999998764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.93  E-value=4.9e-25  Score=177.54  Aligned_cols=146  Identities=25%  Similarity=0.348  Sum_probs=128.3

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+++.+|+++||||++|||+++|++|+++|++|++.+|+++++++..+++...  +.++..+++|++++++.++.++++.
T Consensus         5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (265)
T PRK07097          5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIE   82 (265)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999999999888877777654  4568889999999988888888877


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|++|||||.....+  +.+.+.++|++++++|+.|++.+++.++|+|++++.|+||++||.++.
T Consensus        83 ~~~~--~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  150 (265)
T PRK07097         83 KEVG--VIDILVNNAGIIKRIP--MLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSE  150 (265)
T ss_pred             HhCC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcccc
Confidence            7776  6999999999876543  678899999999999999999999999999998888999999998653

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.3e-25  Score=184.58  Aligned_cols=143  Identities=24%  Similarity=0.377  Sum_probs=123.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++....++.++.++.+|+++..+.++.++++.+.
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            46799999999999999999999999999999999999888887777766544567888999999997777777777766


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++  ++|++|||||...+.    .+.+.++++..+++|+.|++.+++.++|.|++++.++||++||.++
T Consensus        93 ~~--~iD~li~nAg~~~~~----~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~  155 (306)
T PRK06197         93 YP--RIDLLINNAGVMYTP----KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGH  155 (306)
T ss_pred             CC--CCCEEEECCccccCC----CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHH
Confidence            65  699999999986542    2467788999999999999999999999998887899999999864

>PRK06398 aldose dehydrogenase; Validated

Probab=99.93  E-value=2.1e-25  Score=179.18  Aligned_cols=133  Identities=28%  Similarity=0.436  Sum_probs=116.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++++             ..++..+++|++++.+.++.++++.+.
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~   69 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVISK   69 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999998643             125678899999998888877888777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....  ++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        70 ~~--~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  135 (258)
T PRK06398         70 YG--RIDILVNNAGIESYG--AIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSF  135 (258)
T ss_pred             cC--CCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhc
Confidence            76  699999999986543  3778899999999999999999999999999998888999999998764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.93  E-value=5.1e-25  Score=178.56  Aligned_cols=147  Identities=31%  Similarity=0.379  Sum_probs=126.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .++++|+++||||++|||++++++|+++|++|++++|+++++++..+++.+.  +.++..+++|++++.+..+.++++.+
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQILE   83 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3567999999999999999999999999999999999998888887777653  45688899999998777777777777


Q ss_pred             HhcCCCccEEEEcCCCCCCCc-------------ccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecc
Q 045749          139 AIDGLEVGVLINNVGITYPKA-------------MFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS  205 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~-------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS  205 (210)
                      .++  ++|++|||||...+..             .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||
T Consensus        84 ~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS  161 (278)
T PRK08277         84 DFG--PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISS  161 (278)
T ss_pred             HcC--CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            766  6999999999754321             2356788999999999999999999999999999888899999999


Q ss_pred             cccc
Q 045749          206 GAAI  209 (210)
Q Consensus       206 ~ag~  209 (210)
                      .++.
T Consensus       162 ~~~~  165 (278)
T PRK08277        162 MNAF  165 (278)
T ss_pred             chhc
Confidence            8764

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=3.1e-25  Score=178.25  Aligned_cols=142  Identities=13%  Similarity=0.180  Sum_probs=116.1

Q ss_pred             ccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCh---hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHH
Q 045749           60 KSYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNH---NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        60 ~~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~---~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      ++.||+++||||+  +|||+++|++|+++|++|++++|+.   ++++++.+++    ++.++..+++|++++.+.++.++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~   79 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL----EGQESLLLPCDVTSDEEITACFE   79 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc----CCCceEEEecCCCCHHHHHHHHH
Confidence            4569999999997  8999999999999999999998763   3344433332    23567788999999988888888


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCC--cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          135 AIEMAIDGLEVGVLINNVGITYPK--AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++.+.++  ++|++|||||.....  ..++.+.+.++|++.+++|+.+++++++.++|+|.+  +|+||++||.++.
T Consensus        80 ~~~~~~g--~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~  152 (257)
T PRK08594         80 TIKEEVG--VIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGE  152 (257)
T ss_pred             HHHHhCC--CccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCc
Confidence            8877776  699999999976421  123668899999999999999999999999999854  5899999998874

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.93  E-value=5.7e-25  Score=176.92  Aligned_cols=138  Identities=21%  Similarity=0.311  Sum_probs=119.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++|+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++++|++++.+..+.++.+.+.+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVARF   78 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999999999999999988777766554     3467888999999988888778887777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||......   .+.+.++|++.+++|+.+++++++.++|.|+ ++.|+||++||.++.
T Consensus        79 g--~id~lv~~ag~~~~~~---~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~  141 (261)
T PRK08265         79 G--RVDILVNLACTYLDDG---LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAK  141 (261)
T ss_pred             C--CCCEEEECCCCCCCCc---CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhc
Confidence            6  6999999999764422   2568899999999999999999999999997 667999999998764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.93  E-value=5e-25  Score=176.75  Aligned_cols=143  Identities=22%  Similarity=0.433  Sum_probs=123.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+ ++.++..+++.+.  +.++.++++|++++.+..+.++++.+.
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   88 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEALEE   88 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4569999999999999999999999999999999998 5566666666543  456788999999988887777888777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||.++.
T Consensus        89 ~g--~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  154 (258)
T PRK06935         89 FG--KIDILVNNAGTIRRAP--LLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSF  154 (258)
T ss_pred             cC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhc
Confidence            76  6999999999865433  668889999999999999999999999999999888999999998764

>PRK05717 oxidoreductase; Validated

Probab=99.93  E-value=6.5e-25  Score=175.82  Aligned_cols=145  Identities=23%  Similarity=0.356  Sum_probs=121.8

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ++.++.||+++||||++|||+++|++|+++|++|++++|++++.++..+++     +.++.++++|++++.+..+.++++
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~   78 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAEV   78 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHH
Confidence            345677999999999999999999999999999999999987766554433     345778899999987777777777


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+.++  ++|++|||||.......++.+.+.++|++++++|+.|++.+++++.|+|.++ .|+||++||.++.
T Consensus        79 ~~~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~  148 (255)
T PRK05717         79 LGQFG--RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRAR  148 (255)
T ss_pred             HHHhC--CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhc
Confidence            77776  6999999999875433346788999999999999999999999999998765 4899999998764

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.93  E-value=9.8e-25  Score=175.11  Aligned_cols=143  Identities=31%  Similarity=0.385  Sum_probs=120.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++++|+++||||++|||+++|++|+++|++|++++|++ ..++..+++...  +.++.++.+|++++.+..+.++++.+.
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVEA   81 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999985 344555566543  456788999999987777777777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++  ++|++|||||.... ..++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||.++
T Consensus        82 ~~--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  147 (260)
T PRK12823         82 FG--RIDVLINNVGGTIW-AKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIAT  147 (260)
T ss_pred             cC--CCeEEEECCccccC-CCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccc
Confidence            66  69999999996432 23367889999999999999999999999999999888899999999865

>PRK09186 flagellin modification protein A; Provisional

Probab=99.93  E-value=7.2e-25  Score=175.31  Aligned_cols=146  Identities=17%  Similarity=0.207  Sum_probs=124.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+|+++||||++|||+++|++|+++|++|++++|+++++++..+++....++..+.++.+|++++.+..+.++++.+.++
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            48999999999999999999999999999999999999888888886544344566778999998777777777777665


Q ss_pred             CCCccEEEEcCCCCCCC-cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPK-AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                        ++|++|||||..... ...+.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||.++.
T Consensus        83 --~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  149 (256)
T PRK09186         83 --KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGV  149 (256)
T ss_pred             --CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhh
Confidence              699999999864321 123668899999999999999999999999999998888999999998763

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.93  E-value=8.6e-25  Score=175.03  Aligned_cols=143  Identities=28%  Similarity=0.463  Sum_probs=125.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++.+|+++++++..+++++.  +.++..+++|++++.+.++.++.+.+.
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEAE   84 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            356999999999999999999999999999999999998888877777654  456788999999988777777777776


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++  ++|++|||||.....+  +.+.+.++|++++++|+.+++++++.+.|.|.+++.|+||++||..+
T Consensus        85 ~~--~~d~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  149 (255)
T PRK07523         85 IG--PIDILVNNAGMQFRTP--LEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQS  149 (255)
T ss_pred             cC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchh
Confidence            66  6999999999876543  77889999999999999999999999999999888899999999865

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.93  E-value=1.5e-25  Score=170.96  Aligned_cols=137  Identities=28%  Similarity=0.465  Sum_probs=121.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||.+++|||.+|||++++++|+.+|..+.+++-+.|..+ ...++++..|..++.++++|+++..+.++.++++.+.
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~-a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPE-AIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHH-HHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            456999999999999999999999999999888887777744 4567788888999999999999988888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC---CCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK---KGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~---~g~iv~isS~ag~  209 (210)
                      ++  .+|++|||||+.          ++.+|++++++|+.|.++.+...+|+|.+++   +|-|||+||++|+
T Consensus        81 fg--~iDIlINgAGi~----------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL  141 (261)
T KOG4169|consen   81 FG--TIDILINGAGIL----------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL  141 (261)
T ss_pred             hC--ceEEEEcccccc----------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc
Confidence            88  699999999975          3567999999999999999999999998875   5689999999986

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.93  E-value=9.4e-25  Score=174.83  Aligned_cols=143  Identities=20%  Similarity=0.319  Sum_probs=119.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++++||+++||||++|||+++|++|+++|++|++++++..  ++..+++...  +.++..+++|++++++.++.++++.+
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAVA   81 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3567999999999999999999999999999999887643  3344455443  45678889999998888888888877


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||.....+  +.+.+.++|++++++|+.+++.++++++|.|++++ .|+||++||.++.
T Consensus        82 ~~~--~~D~li~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  149 (253)
T PRK08993         82 EFG--HIDILVNNAGLIRRED--AIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSF  149 (253)
T ss_pred             HhC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhc
Confidence            776  6999999999865543  67889999999999999999999999999998875 5899999998764

>PLN00015 protochlorophyllide reductase

Probab=99.93  E-value=5.1e-25  Score=181.34  Aligned_cols=137  Identities=18%  Similarity=0.265  Sum_probs=116.1

Q ss_pred             EEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCc
Q 045749           67 LITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEV  145 (210)
Q Consensus        67 lITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~i  145 (210)
                      +||||++|||+++|++|+++| ++|++++|+++++++..+++...  +.++.++++|+++..+.++.++.+.+..+  ++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~--~i   76 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGR--PL   76 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCC--CC
Confidence            599999999999999999999 99999999998888777776432  45678889999999777777777765544  69


Q ss_pred             cEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC--CCEEEEeccccc
Q 045749          146 GVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK--KGAIVNIGSGAA  208 (210)
Q Consensus       146 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~--~g~iv~isS~ag  208 (210)
                      |+||||||+.... .+..+.+.++|+++|++|+.|++.+++.++|.|++++  .|+||++||.++
T Consensus        77 D~lInnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~  140 (308)
T PLN00015         77 DVLVCNAAVYLPT-AKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITG  140 (308)
T ss_pred             CEEEECCCcCCCC-CCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecccc
Confidence            9999999985432 2245788999999999999999999999999998876  689999999876

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.93  E-value=9.4e-25  Score=175.35  Aligned_cols=140  Identities=22%  Similarity=0.339  Sum_probs=120.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||++|||+++|++|+++|++|++++|+++++++..+++++.   .++..+++|++++++.++.++++.+.++  +
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~~~g--~   76 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWELLG--G   76 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHHhcC--C
Confidence            6899999999999999999999999999999999988888888653   3577889999998878877777777766  6


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh-CCCCEEEEecccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR-RKKGAIVNIGSGAAI  209 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~-~~~g~iv~isS~ag~  209 (210)
                      +|++|||||.....+..+.+.+.++|.+.+++|+.+++++++.++|.|.+ +++|+||++||.++.
T Consensus        77 id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~  142 (259)
T PRK08340         77 IDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVK  142 (259)
T ss_pred             CCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccC
Confidence            99999999986433334668889999999999999999999999999874 567999999998764

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=1.3e-24  Score=178.89  Aligned_cols=146  Identities=24%  Similarity=0.355  Sum_probs=123.2

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~-~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      ...+++||+++||||++|||+++|++|+++|++|++.+++ .+..++..++++..  +.++..+.+|+++.++..+.+++
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~   83 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVAT   83 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHH
Confidence            4456789999999999999999999999999999999985 45667777777654  55788899999998777777777


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-------CCEEEEeccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-------KGAIVNIGSGAA  208 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-------~g~iv~isS~ag  208 (210)
                      +.+ ++  ++|++|||||......  +.+.+.++|++++++|+.|++++++++.|+|+++.       .|+||++||.++
T Consensus        84 ~~~-~g--~iD~li~nAG~~~~~~--~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  158 (306)
T PRK07792         84 AVG-LG--GLDIVVNNAGITRDRM--LFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAG  158 (306)
T ss_pred             HHH-hC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccc
Confidence            766 65  7999999999876543  67889999999999999999999999999997542       379999999876


Q ss_pred             c
Q 045749          209 I  209 (210)
Q Consensus       209 ~  209 (210)
                      .
T Consensus       159 ~  159 (306)
T PRK07792        159 L  159 (306)
T ss_pred             c
Confidence            4

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2e-24  Score=172.03  Aligned_cols=143  Identities=21%  Similarity=0.267  Sum_probs=126.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +|+++||||++|||++++++|+++|++|++++|+++++++..+++....++.++.++++|++++++..+.++++.+.++ 
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG-   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            6899999999999999999999999999999999999888888887766677889999999998777777777777766 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|++|||||+....+  +.+.+.+.+++++++|+.+++++++.++|.|++++.++||++||.++.
T Consensus        81 -~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  144 (248)
T PRK08251         81 -GLDRVIVNAGIGKGAR--LGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAV  144 (248)
T ss_pred             -CCCEEEECCCcCCCCC--cCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccc
Confidence             6999999999876543  567788999999999999999999999999988888999999998764

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.9e-24  Score=172.40  Aligned_cols=141  Identities=27%  Similarity=0.419  Sum_probs=119.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++.... +.++..+.+|++++.+    ++++.+.
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~----~~~~~~~   78 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEA----REQLAAE   78 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHH----HHHHHHH
Confidence            4568999999999999999999999999999999999998888888776543 4567788899987744    3344444


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+  ++|++|||||.....  ++.+.+.++|++++++|+.++++++++++|.|.+++.|+||++||..+.
T Consensus        79 ~g--~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~  144 (259)
T PRK06125         79 AG--DIDILVNNAGAIPGG--GLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE  144 (259)
T ss_pred             hC--CCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc
Confidence            54  699999999986543  3778999999999999999999999999999998888999999998763

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.2e-24  Score=172.27  Aligned_cols=146  Identities=24%  Similarity=0.288  Sum_probs=125.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++.+|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.  +.+...+++|++++.+.++.++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIRE   81 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3466899999999999999999999999999999999998888888887654  34677889999998777777777777


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||.... ..++.+.+.+++++.+++|+.+++.++++++|+|++++.|+|+++||..+.
T Consensus        82 ~~~--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  149 (252)
T PRK07035         82 RHG--RLDILVNNAAANPY-FGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGV  149 (252)
T ss_pred             HcC--CCCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhc
Confidence            776  69999999996532 123567899999999999999999999999999988888999999998763

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.93  E-value=9.6e-25  Score=175.09  Aligned_cols=141  Identities=23%  Similarity=0.310  Sum_probs=119.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +++++||||++|||++++++|+++|++|++++|+.+++++..+++...  . ++.++.+|++++++..+.++++.+..+ 
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g-   77 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAHG-   77 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhCC-
Confidence            578999999999999999999999999999999998887766655432  2 788899999998777777777777666 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|++|||||...... ...+.+.+++++++++|+.|++++++.++|.|++++.|+||++||.+++
T Consensus        78 -~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~  142 (257)
T PRK07024         78 -LPDVVIANAGISVGTL-TEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGV  142 (257)
T ss_pred             -CCCEEEECCCcCCCcc-ccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhc
Confidence             6899999999865322 2233688999999999999999999999999998888999999998764

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=1.6e-24  Score=173.79  Aligned_cols=144  Identities=20%  Similarity=0.351  Sum_probs=120.5

Q ss_pred             ccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecC-----------hhHHHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           60 KSYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRN-----------HNKLEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        60 ~~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~-----------~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+           .++.++..+++++.  +.++.++++|++++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~   80 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQN   80 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCCH
Confidence            3569999999998  599999999999999999997642           23344445555543  56788899999999


Q ss_pred             ccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      ++..+.++.+.+.++  ++|++|||||.....+  +.+.+.++|++++++|+.|++++++.++|.|.+++.|+||++||.
T Consensus        81 ~~i~~~~~~~~~~~g--~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~  156 (256)
T PRK12859         81 DAPKELLNKVTEQLG--YPHILVNNAAYSTNND--FSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSG  156 (256)
T ss_pred             HHHHHHHHHHHHHcC--CCcEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEccc
Confidence            888888888877776  6999999999865533  678999999999999999999999999999988888999999998


Q ss_pred             ccc
Q 045749          207 AAI  209 (210)
Q Consensus       207 ag~  209 (210)
                      ++.
T Consensus       157 ~~~  159 (256)
T PRK12859        157 QFQ  159 (256)
T ss_pred             ccC
Confidence            864

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.5e-24  Score=173.42  Aligned_cols=142  Identities=25%  Similarity=0.339  Sum_probs=116.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~-r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++|+++||||++|||+++|++|+++|++|++.+ |+++++++..+++...  +.+...+.+|+++..+....++++.+..
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNEL   80 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHHh
Confidence            489999999999999999999999999999875 6667777777777654  4456788899998877776666665543


Q ss_pred             ----cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 ----DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ----~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                          +..++|++|||||.....  ++.+.+.++|++++++|+.|+++++++++|.|++  .|+||++||.++.
T Consensus        81 ~~~~g~~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~  149 (252)
T PRK12747         81 QNRTGSTKFDILINNAGIGPGA--FIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATR  149 (252)
T ss_pred             hhhcCCCCCCEEEECCCcCCCC--CcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccc
Confidence                212699999999986433  3678899999999999999999999999999865  3899999999874

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.8e-24  Score=175.17  Aligned_cols=143  Identities=20%  Similarity=0.273  Sum_probs=121.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH-------HHHHHHHHHhhCCCceeEEEEEecccCccchhh
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK-------LEKISNEIQAENPNTQINIVEYDFSCDVVSAGN  132 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~-------l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~  132 (210)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.       +++..++++..  +.++.++++|++++++..+.
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~   80 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAAA   80 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHH
Confidence            3568999999999999999999999999999999998643       44555556543  45688899999999888887


Q ss_pred             HHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          133 IKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       133 ~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++++.+.++  ++|++|||||.....+  ..+.+.++|++++++|+.|++.++++++|+|++++.|+|+++||.++
T Consensus        81 ~~~~~~~~g--~id~li~~ag~~~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  152 (273)
T PRK08278         81 VAKAVERFG--GIDICVNNASAINLTG--TEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLN  152 (273)
T ss_pred             HHHHHHHhC--CCCEEEECCCCcCCCC--cccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchh
Confidence            777777776  6999999999876544  66889999999999999999999999999999888899999999764

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=8.5e-25  Score=177.08  Aligned_cols=142  Identities=15%  Similarity=0.182  Sum_probs=113.9

Q ss_pred             cCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +.||+++||||+  +|||+++|++|+++|++|++++|++. .++..+++.+.. + ....+++|++++.+.++.++++.+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~-~-~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAEL-G-AFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhc-C-CceEEecCCCCHHHHHHHHHHHHH
Confidence            458999999997  89999999999999999999988742 233333443332 1 245688999999888888888877


Q ss_pred             HhcCCCccEEEEcCCCCCCC--cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPK--AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||+....  ..++.+.+.++|++++++|+.|++++++.++|+|.+  +|+||++||.++.
T Consensus        85 ~~g--~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~  153 (272)
T PRK08159         85 KWG--KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAE  153 (272)
T ss_pred             hcC--CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccc
Confidence            776  699999999986431  134678899999999999999999999999998853  4899999998653

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1e-24  Score=176.86  Aligned_cols=137  Identities=21%  Similarity=0.295  Sum_probs=116.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+|+++||||++|||+++|++|+++|++|++++|++++++++.    +    ..+.++.+|++++.+.++.++.+.+..+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----A----EGLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----H----CCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3789999999999999999999999999999999988765443    2    1356788999988777666666655553


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      + ++|++|||||.....+  +.+.+.+++++++++|+.|++.+++.++|.|.+++.|+||++||.+|.
T Consensus        75 g-~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~  139 (277)
T PRK05993         75 G-RLDALFNNGAYGQPGA--VEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGL  139 (277)
T ss_pred             C-CccEEEECCCcCCCCC--cccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhc
Confidence            3 7999999999876644  678899999999999999999999999999999888999999998774

>PRK05855 short chain dehydrogenase; Validated

Probab=99.93  E-value=1.3e-24  Score=192.24  Aligned_cols=144  Identities=24%  Similarity=0.334  Sum_probs=127.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ...+++++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++.+|++++.+..+.++++.+.
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~  389 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVRAE  389 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            355899999999999999999999999999999999999998888888665  447888999999998887777777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      .+  ++|++|||||.....+  +.+.+.+++++++++|+.|+++++++++|.|++++ +|+||++||.+++
T Consensus       390 ~g--~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  456 (582)
T PRK05855        390 HG--VPDIVVNNAGIGMAGG--FLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAY  456 (582)
T ss_pred             cC--CCcEEEECCccCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence            66  6999999999976544  67889999999999999999999999999998876 4899999999875

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.8e-24  Score=172.82  Aligned_cols=146  Identities=27%  Similarity=0.374  Sum_probs=125.4

Q ss_pred             ccCCcEEEEEcCC-ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGAT-DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGas-sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ...+|+++||||+ +|||++++++|+++|++|++++|+.+++++..+++++..+..++..+++|++++++.++.++++.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            3568999999998 599999999999999999999999998888888887644445688889999988777777777766


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||.....  .+.+.+.++|++++++|+.+++.+++.++|.|++++ .|+||++||.++.
T Consensus        94 ~~g--~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~  161 (262)
T PRK07831         94 RLG--RLDVLVNNAGLGGQT--PVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGW  161 (262)
T ss_pred             HcC--CCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc
Confidence            665  699999999986543  377889999999999999999999999999998876 7999999998764

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.93  E-value=1.7e-24  Score=179.18  Aligned_cols=143  Identities=19%  Similarity=0.216  Sum_probs=118.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ..+|+++||||++|||++++++|+++|++|++++|+++++++..+++...  +.++.++.+|+++..+.++.++++.+..
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            35899999999999999999999999999999999999888887777532  4567888999998877777666654443


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCC--CEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK--GAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~--g~iv~isS~ag  208 (210)
                      +  ++|++|||||+.... ....+.+.++++.++++|+.|++++++.++|.|++++.  ++||++||.+.
T Consensus        82 ~--~iD~li~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~  148 (322)
T PRK07453         82 K--PLDALVCNAAVYMPL-LKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTA  148 (322)
T ss_pred             C--CccEEEECCcccCCC-CCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEccccc
Confidence            3  699999999986432 11336688999999999999999999999999988764  69999999754

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.4e-24  Score=172.24  Aligned_cols=144  Identities=27%  Similarity=0.317  Sum_probs=125.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+|+++||||++|||++++++|+++|++|++++|+++++++..+++.+.  +.++..+.+|++++.+..+.++++.+.+
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999999999999999999888887777654  4568889999999887777777777777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||..... .++.+.+.+++++++++|+.+++.++++++|+|.+++.|++|++||.++.
T Consensus        83 g--~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~  148 (253)
T PRK06172         83 G--RLDYAFNNAGIEIEQ-GRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGL  148 (253)
T ss_pred             C--CCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhc
Confidence            6  699999999986442 23567899999999999999999999999999988888999999998764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.93  E-value=2.5e-24  Score=172.38  Aligned_cols=146  Identities=23%  Similarity=0.361  Sum_probs=127.4

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      +.++.||+++||||++|||++++++|+++|++|++++|+++++++..+++++.  +.++..+.+|++++.+..+.++++.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARID   83 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHH
Confidence            44567999999999999999999999999999999999998888888777654  4467889999999877777777777


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|++|||||.....+  +.+.+.++|++.+++|+.+++.+++.++|.|.+++.|++|++||.++.
T Consensus        84 ~~~~--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~  151 (256)
T PRK06124         84 AEHG--RLDILVNNVGARDRRP--LAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQ  151 (256)
T ss_pred             HhcC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhc
Confidence            7666  6999999999865533  678899999999999999999999999999988888999999998763

>PRK06484 short chain dehydrogenase; Validated

Probab=99.93  E-value=1.8e-24  Score=189.73  Aligned_cols=142  Identities=25%  Similarity=0.432  Sum_probs=122.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.+...+++|++++.+.++.++.+.+.+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHREF   77 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999999999999999998887766555     3456788999999988888888888777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCC-EEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKG-AIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g-~iv~isS~ag~  209 (210)
                      +  ++|+||||||...+...++.+.+.++|++++++|+.+++.++++++|+|++++.| +||++||.++.
T Consensus        78 g--~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~  145 (520)
T PRK06484         78 G--RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGL  145 (520)
T ss_pred             C--CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccC
Confidence            7  6999999999853322346688999999999999999999999999999887665 99999998774

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=1.6e-24  Score=174.37  Aligned_cols=142  Identities=16%  Similarity=0.171  Sum_probs=111.2

Q ss_pred             cCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGA--TDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGa--ssGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +.+|+++||||  ++|||+++|++|+++|++|++++|.... ++..+++.+..+.  ...+++|++++++.++.++.+.+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFGS--DLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHHHHHHhcCC--cceeeccCCCHHHHHHHHHHHHH
Confidence            45899999996  6899999999999999999998765221 2222333332222  24678999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCc---ccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKA---MFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||.....+   ..+.+.+.++|++.|++|+.|+++++|+++|+|.  ++|+||++||.++.
T Consensus        81 ~~g--~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~  150 (260)
T PRK06997         81 HWD--GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAE  150 (260)
T ss_pred             HhC--CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeccccc
Confidence            876  7999999999864321   1134678899999999999999999999999983  35899999998763

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=1.3e-24  Score=175.11  Aligned_cols=142  Identities=15%  Similarity=0.181  Sum_probs=114.3

Q ss_pred             cCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGATD--GIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGass--GiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++||+++||||++  |||+++|++|+++|++|++++|+ +++++..+++....  .....+.+|++++.+.++.++++.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHh
Confidence            4589999999986  99999999999999999999998 44555556665543  2356788999999888888888777


Q ss_pred             HhcCCCccEEEEcCCCCCCCc---ccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKA---MFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||+.....   ..+.+.+.++|++++++|+.|++.+++.+.|.| ++ +|+||++||.++.
T Consensus        81 ~~g--~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~-~g~Iv~iss~~~~  150 (262)
T PRK07984         81 VWP--KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML-NP-GSALLTLSYLGAE  150 (262)
T ss_pred             hcC--CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHh-cC-CcEEEEEecCCCC
Confidence            766  6999999999754311   114567899999999999999999999999855 33 4899999998763

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.5e-24  Score=173.83  Aligned_cols=140  Identities=28%  Similarity=0.349  Sum_probs=122.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      ++++||||+||||++++++|+++|++|++++|+.+++++..++++..  +.++.++.+|++++.+..+.++.+.+.++  
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~--   76 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWG--   76 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence            47999999999999999999999999999999999988888888665  45678889999988776776666766665  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|++|||||......  +.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||.++.
T Consensus        77 ~id~lI~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~  140 (270)
T PRK05650         77 GIDVIVNNAGVASGGF--FEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGL  140 (270)
T ss_pred             CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhc
Confidence            6999999999876544  678899999999999999999999999999988888999999998764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.92  E-value=4.1e-24  Score=171.42  Aligned_cols=143  Identities=20%  Similarity=0.287  Sum_probs=124.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +|+++||||++|||++++++|+++|++|++++|+.+++++..+++....+..++.++.+|++++.+....++++.+.++ 
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG-   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC-
Confidence            6899999999999999999999999999999999988888877776654335688999999998777777777777766 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                       ++|++|||||.....+  +.+.+.++|++.+++|+.|++++.++++|.|++++ .|+||++||.++.
T Consensus        81 -~id~vv~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~  145 (259)
T PRK12384         81 -RVDLLVYNAGIAKAAF--ITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGK  145 (259)
T ss_pred             -CCCEEEECCCcCCCCC--cccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccc
Confidence             6999999999876543  67889999999999999999999999999998876 6899999997653

>PRK08643 acetoin reductase; Validated

Probab=99.92  E-value=4.5e-24  Score=170.90  Aligned_cols=141  Identities=21%  Similarity=0.360  Sum_probs=123.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++++++..+.++++.+.++ 
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-   78 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFG-   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence            789999999999999999999999999999999998888888777654  45678899999999888887888877776 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                       ++|++|||||.....+  +.+.+.+++++++++|+.+++++++.++|.|++++ .|+||++||.++.
T Consensus        79 -~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  143 (256)
T PRK08643         79 -DLNVVVNNAGVAPTTP--IETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGV  143 (256)
T ss_pred             -CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccc
Confidence             6999999999865433  67889999999999999999999999999998765 5899999998764

>PRK06182 short chain dehydrogenase; Validated

Probab=99.92  E-value=2.7e-24  Score=173.97  Aligned_cols=136  Identities=30%  Similarity=0.398  Sum_probs=117.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ++|+++||||++|||++++++|+++|++|++++|+++++++..    .    ..+.++.+|++++++..+.++++.+..+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S----LGVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h----CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999999999987765432    1    1367788999998777777777776665


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                        ++|++|||||.....+  +.+.+.+++++++++|+.|++.+++.++|.|++++.|+||++||.++.
T Consensus        74 --~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~  137 (273)
T PRK06182         74 --RIDVLVNNAGYGSYGA--IEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGK  137 (273)
T ss_pred             --CCCEEEECCCcCCCCc--hhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhc
Confidence              6999999999876544  678899999999999999999999999999998888999999998763

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.92  E-value=4.8e-24  Score=170.79  Aligned_cols=145  Identities=26%  Similarity=0.334  Sum_probs=125.0

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+++.+|+++||||++|||++++++|+++|++|++++|+++..++..++++..  +.++.++.+|++++++..+.++.+.
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   83 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAL   83 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999999998888887777654  4567888999999987777777777


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|++|||||...+.+  + +.+.++|++.+++|+.|+++++++++|+|.+++.|+||++||.++.
T Consensus        84 ~~~~--~~d~li~~ag~~~~~~--~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  150 (255)
T PRK06113         84 SKLG--KVDILVNNAGGGGPKP--F-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE  150 (255)
T ss_pred             HHcC--CCCEEEECCCCCCCCC--C-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEeccccc
Confidence            7766  6999999999865432  3 6789999999999999999999999999988777899999998764

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5e-24  Score=171.55  Aligned_cols=144  Identities=24%  Similarity=0.406  Sum_probs=124.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++.+|++++.+..+.++++.+.
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999998888887777653  456788899999987777777777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh-CCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR-RKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~-~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.+++++++++|+.+++.+++++.|+|.+ ++.|+||++||.+|.
T Consensus        85 ~~--~id~vi~~Ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~  151 (263)
T PRK07814         85 FG--RLDIVVNNVGGTMPNP--LLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGR  151 (263)
T ss_pred             cC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccccc
Confidence            76  6999999999865533  668899999999999999999999999999987 567999999998874

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.92  E-value=3.4e-24  Score=170.71  Aligned_cols=142  Identities=25%  Similarity=0.388  Sum_probs=118.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++.  ++..+++.+.  +.++..+++|++++++....++++.+.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVEE   77 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            356999999999999999999999999999999999753  3444444433  456788999999987777777777766


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      .+  ++|++|||||.....+  +.+.+.++|++++++|+.+++.++++++|.|++++ .|+||++||.+++
T Consensus        78 ~~--~~d~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  144 (248)
T TIGR01832        78 FG--HIDILVNNAGIIRRAD--AEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSF  144 (248)
T ss_pred             cC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhc
Confidence            65  6999999999876533  66788999999999999999999999999998776 6899999998653

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.92  E-value=2e-24  Score=173.69  Aligned_cols=140  Identities=19%  Similarity=0.316  Sum_probs=114.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++|+++||||++|||+++|++|+++|++|++++|++++++++.++    . +.++..+++|++++.+..+.++++.+.+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----H-GDAVVGVEGDVRSLDDHKEAVARCVAAF   77 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----c-CCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999998777665432    1 3467788999999887888788887777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCH----HHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDE----KEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~----~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||..... .++.+.+.    ++|++++++|+.|+++++++++|.|.+++ |+||+++|.++.
T Consensus        78 g--~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~  146 (262)
T TIGR03325        78 G--KIDCLIPNAGIWDYS-TALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGF  146 (262)
T ss_pred             C--CCCEEEECCCCCccC-CccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEecccee
Confidence            6  699999999975321 11333333    57999999999999999999999997764 899999998764

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06196 oxidoreductase; Provisional

Probab=99.92  E-value=1.9e-24  Score=178.41  Aligned_cols=137  Identities=18%  Similarity=0.232  Sum_probs=116.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++.      .+.++++|+++..+.++.++++.+.
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~~   96 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLDS   96 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHhc
Confidence            4568999999999999999999999999999999999888877666653      2667889999887777767776665


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .+  ++|++|||||.....    .+.+.++|+..+++|+.|++++++.++|.|.+++.++||++||.++
T Consensus        97 ~~--~iD~li~nAg~~~~~----~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~  159 (315)
T PRK06196         97 GR--RIDILINNAGVMACP----ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGH  159 (315)
T ss_pred             CC--CCCEEEECCCCCCCC----CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHh
Confidence            55  699999999976431    2456788999999999999999999999998887799999999754

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.5e-24  Score=171.50  Aligned_cols=143  Identities=21%  Similarity=0.287  Sum_probs=121.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.+..++.+|++++.+..+.++++.+.
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999998888777777654  345678899999887777777777666


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....  ++.+.+.++|++++++|+.|+++++++++|.|.++ +|+||++||.++.
T Consensus        84 ~~--~iD~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~  148 (264)
T PRK07576         84 FG--PIDVLVSGAAGNFPA--PAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAF  148 (264)
T ss_pred             cC--CCCEEEECCCCCCCC--ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhc
Confidence            65  699999999976543  36788999999999999999999999999998765 4899999998763

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.92  E-value=3.2e-24  Score=172.57  Aligned_cols=140  Identities=21%  Similarity=0.332  Sum_probs=116.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++|+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+++|++++.+.++.++++.+.+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVDAF   78 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence            45899999999999999999999999999999999988877665544     3356788999999887777777777776


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHH----HHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKE----WMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~----~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||..... .++.+.+.++    |++++++|+.+++.+++.++|.|+++ +|+||++||.++.
T Consensus        79 g--~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~  147 (263)
T PRK06200         79 G--KLDCFVGNAGIWDYN-TSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSF  147 (263)
T ss_pred             C--CCCEEEECCCCcccC-CCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhc
Confidence            6  699999999975421 1244556554    89999999999999999999998765 4899999998764

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=4.2e-24  Score=171.11  Aligned_cols=139  Identities=31%  Similarity=0.470  Sum_probs=115.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++++.++.   .+++...    .+.++.+|++++.+.++.++++.+.
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~~   76 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK----GVFTIKCDVGNRDQVKKSKEVVEKE   76 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC----CCeEEEecCCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999887764432   2233321    3677899999998888877887777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....  ++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        77 ~~--~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~  142 (255)
T PRK06463         77 FG--RVDVLVNNAGIMYLM--PFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGI  142 (255)
T ss_pred             cC--CCCEEEECCCcCCCC--ChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhC
Confidence            76  699999999986543  3668899999999999999999999999999988888999999998763

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=6.8e-24  Score=169.10  Aligned_cols=141  Identities=23%  Similarity=0.312  Sum_probs=122.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEE-EecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~-~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+++++||||++|||++++++|+++|++|++ .+|+.++.++..++++..  +.++.++.+|++++.+..+.++++.+.+
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEEF   80 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999876 588888888877777654  4578888999999877777777777776


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +  ++|++|||||.....+  +.+.+.+++++.+++|+.+++.++++++|+|++++.|+||++||..+
T Consensus        81 ~--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  144 (250)
T PRK08063         81 G--RLDVFVNNAASGVLRP--AMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGS  144 (250)
T ss_pred             C--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhh
Confidence            5  6999999999875544  67889999999999999999999999999999888899999999765

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.5e-24  Score=170.59  Aligned_cols=142  Identities=16%  Similarity=0.183  Sum_probs=116.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhH-HHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNK-LEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~-l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++|+++||||++|||+++|++|+++| ++|++++|++++ +++..++++..+ ..++.++++|++++.+..+.++++.+ 
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~-   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA-   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh-
Confidence            47899999999999999999999995 899999999886 888888887643 34788999999988766666666654 


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+  ++|++|||+|.......  ...+.++..+++++|+.+++.+++.++|.|++++.|+||++||.+|.
T Consensus        85 ~g--~id~li~~ag~~~~~~~--~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~  150 (253)
T PRK07904         85 GG--DVDVAIVAFGLLGDAEE--LWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGE  150 (253)
T ss_pred             cC--CCCEEEEeeecCCchhh--cccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhc
Confidence            23  79999999998644221  12245566689999999999999999999999988999999998763

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.92  E-value=6.9e-24  Score=170.09  Aligned_cols=145  Identities=28%  Similarity=0.347  Sum_probs=118.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHH----cCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           65 WALITGATDGIGKAFAHQLAQ----HGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~----~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++||||++|||+++|++|++    +|++|++++|++++++++.++++...++.++.++.+|+++..+.++.++.+.+..
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999999999988888764445678889999999877777777777665


Q ss_pred             cCC--CccEEEEcCCCCCCCcccccC-CCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC--CCEEEEecccccc
Q 045749          141 DGL--EVGVLINNVGITYPKAMFFHE-VDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK--KGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~--~id~lvnnAg~~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~--~g~iv~isS~ag~  209 (210)
                      +..  +.|++|||||..........+ .+.++|++++++|+.|++++++.++|.|++++  .|+||++||.++.
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~  155 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAI  155 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhC
Confidence            432  347999999975432111223 35789999999999999999999999998753  4799999998764

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06128 oxidoreductase; Provisional

Probab=99.92  E-value=6e-24  Score=174.36  Aligned_cols=142  Identities=21%  Similarity=0.259  Sum_probs=118.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh--HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN--KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~--~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +.||+++||||++|||+++|++|+++|++|++++++.+  ..++..++++..  +.+..++.+|+++..+.++.++++.+
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  130 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAVK  130 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999887643  445555566553  45678899999999888888888877


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||..... ..+.+.+.++|++++++|+.|+++++++++|.|.+  .|+||++||.+++
T Consensus       131 ~~g--~iD~lV~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~  196 (300)
T PRK06128        131 ELG--GLDILVNIAGKQTAV-KDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSY  196 (300)
T ss_pred             HhC--CCCEEEECCcccCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCcccc
Confidence            776  699999999976432 23678899999999999999999999999998853  4799999998764

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=1.3e-24  Score=164.45  Aligned_cols=138  Identities=23%  Similarity=0.296  Sum_probs=114.8

Q ss_pred             CCcEEEEEcCC-ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGAT-DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGas-sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ..|.++|||+| +|||.++|++|+++|+.|+.++|+.+...++..+       ..+.....|++++++......++.+. 
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~-------~gl~~~kLDV~~~~~V~~v~~evr~~-   77 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ-------FGLKPYKLDVSKPEEVVTVSGEVRAN-   77 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh-------hCCeeEEeccCChHHHHHHHHHHhhC-
Confidence            35789999875 7999999999999999999999998887765432       24778889999997666654555543 


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccccC
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV  210 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~~  210 (210)
                      ..+++|.|+||||.....|  ..|.+.++.+++|++|++|+++++|++. +|+-+.+|.|||++|.++++
T Consensus        78 ~~Gkld~L~NNAG~~C~~P--a~d~~i~ave~~f~vNvfG~irM~~a~~-h~likaKGtIVnvgSl~~~v  144 (289)
T KOG1209|consen   78 PDGKLDLLYNNAGQSCTFP--ALDATIAAVEQCFKVNVFGHIRMCRALS-HFLIKAKGTIVNVGSLAGVV  144 (289)
T ss_pred             CCCceEEEEcCCCCCcccc--cccCCHHHHHhhhccceeeeehHHHHHH-HHHHHccceEEEecceeEEe
Confidence            3348999999999987765  7799999999999999999999999999 45566679999999998863

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.92  E-value=1.2e-23  Score=168.97  Aligned_cols=143  Identities=22%  Similarity=0.381  Sum_probs=121.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~-~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++|+++||||++|||+++|++|+++|++|++++|+. +..++..+++...  +.++..+.+|++++.+..+.++.+.+.
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence            5699999999999999999999999999999988854 4566666677554  456788899999987777777777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      .+  ++|++|||||.....+  +.+.+.++|++.+++|+.+++.+++.++|+|.+++ .|+||++||..+.
T Consensus        83 ~g--~id~lv~~ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~  149 (261)
T PRK08936         83 FG--TLDVMINNAGIENAVP--SHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ  149 (261)
T ss_pred             cC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc
Confidence            66  6999999999865543  66889999999999999999999999999998765 6899999998653

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.4e-24  Score=171.82  Aligned_cols=139  Identities=27%  Similarity=0.286  Sum_probs=118.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+|+++||||+||||++++++|+++|++|++++|+++++++..+.    . +.++..+.+|++++++..+.++.+.+.++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----H-PDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----c-CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            368999999999999999999999999999999998776554332    1 34677889999999777777777777666


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                        ++|++|||||.....+  ..+.+.++|++++++|+.|++++++.++|+|++++.|+||++||.++.
T Consensus        78 --~~d~vv~~ag~~~~~~--~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~  141 (277)
T PRK06180         78 --PIDVLVNNAGYGHEGA--IEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGL  141 (277)
T ss_pred             --CCCEEEECCCccCCcc--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEeccccc
Confidence              6999999999875543  678899999999999999999999999999998888999999998764

>PRK06484 short chain dehydrogenase; Validated

Probab=99.92  E-value=5.6e-24  Score=186.57  Aligned_cols=139  Identities=26%  Similarity=0.369  Sum_probs=119.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ..||+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.+...+.+|++++++.++.++++.+.+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~  341 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQARW  341 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999998887766554     3456678999999988888888887777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||..... .++.+.+.++|++++++|+.|++++++.++|+|  ++.|+||++||.++.
T Consensus       342 g--~id~li~nAg~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~  405 (520)
T PRK06484        342 G--RLDVLVNNAGIAEVF-KPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASL  405 (520)
T ss_pred             C--CCCEEEECCCCcCCC-CChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhc
Confidence            6  699999999986431 236688999999999999999999999999999  446899999999875

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=3.7e-24  Score=171.85  Aligned_cols=138  Identities=19%  Similarity=0.249  Sum_probs=112.1

Q ss_pred             cCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCh--hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           61 SYGSWALITGA--TDGIGKAFAHQLAQHGLNLILVSRNH--NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        61 ~~gk~vlITGa--ssGiG~~~a~~l~~~G~~Vi~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      +.+|+++||||  ++|||+++|++|+++|++|++++|+.  +.+++..+++     +.+..++++|++++++.++.++++
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~i~~~~~~~   79 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL-----PEPAPVLELDVTNEEHLASLADRV   79 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc-----CCCCcEEeCCCCCHHHHHHHHHHH
Confidence            45899999999  89999999999999999999999864  3344443333     225678899999998888888887


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCc--ccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKA--MFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      .+.++  ++|++|||||+.....  .++.+.+.++|++++++|+.+++++++.++|+|++  +|+||++||.+
T Consensus        80 ~~~~g--~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~  148 (256)
T PRK07889         80 REHVD--GLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA  148 (256)
T ss_pred             HHHcC--CCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc
Confidence            77776  6999999999864311  23667889999999999999999999999999963  48999998653

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.4e-24  Score=170.78  Aligned_cols=137  Identities=26%  Similarity=0.396  Sum_probs=116.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||++++++|+++|++|++++|++++.         .  ..++.++++|++++++.++.++++.+.
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------L--PEGVEFVAADLTTAEGCAAVARAVLER   74 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------c--CCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            46699999999999999999999999999999999986531         1  345778899999987777777777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||........+.+.+.++|++.+++|+.|++++++.++|+|++++.|+||++||.++.
T Consensus        75 ~~--~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~  142 (260)
T PRK06523         75 LG--GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRR  142 (260)
T ss_pred             cC--CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEeccccc
Confidence            66  699999999975432234667899999999999999999999999999998888999999998764

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.2e-24  Score=171.89  Aligned_cols=133  Identities=29%  Similarity=0.410  Sum_probs=116.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +++++||||+||||++++++|+++|++|++++|++++.+.          ..++.++++|++++.+.++.++.+.+.++ 
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g-   72 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAG-   72 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCC-
Confidence            6799999999999999999999999999999998765432          23567889999999888887777777766 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|++|||||.....+  +.+.+.+++++++++|+.|++.+++.++|.|++++.|+||++||.+++
T Consensus        73 -~~d~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~  136 (270)
T PRK06179         73 -RIDVLVNNAGVGLAGA--AEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGF  136 (270)
T ss_pred             -CCCEEEECCCCCCCcC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCcccc
Confidence             6999999999876544  678899999999999999999999999999999989999999998764

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=9.8e-24  Score=168.22  Aligned_cols=142  Identities=23%  Similarity=0.316  Sum_probs=123.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      +.++|||||+|||+++|.++.++|++|.+++|+.+++++++++++-......+.+..+|+.|.++....++++.+..+  
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~--  111 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEG--  111 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccC--
Confidence            689999999999999999999999999999999999999999987654344477888888777555555555554444  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      ++|.++||||...++.  +.+.+.++++..|++|++|+++.+++.+|.|+++. .|+|+.+||.+|.
T Consensus       112 ~~d~l~~cAG~~v~g~--f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~  176 (331)
T KOG1210|consen  112 PIDNLFCCAGVAVPGL--FEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM  176 (331)
T ss_pred             CcceEEEecCcccccc--cccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh
Confidence            7999999999988755  89999999999999999999999999999999887 6899999999875

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.2e-23  Score=167.74  Aligned_cols=142  Identities=26%  Similarity=0.388  Sum_probs=124.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++.   .+.++..+++|++++.+..+.++++.+.+
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999999888877776665   25668899999999988888777777777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.+++++++++|+.+++.+++.++|.|++++.++|+++||..+.
T Consensus        80 ~--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~  144 (252)
T PRK06138         80 G--RLDVLVNNAGFGCGGT--VVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLAL  144 (252)
T ss_pred             C--CCCEEEECCCCCCCCC--cccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhc
Confidence            6  6999999999865533  567889999999999999999999999999998888999999998653

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.2e-23  Score=168.45  Aligned_cols=143  Identities=22%  Similarity=0.328  Sum_probs=122.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++...  +.++..+.+|++++++.+..++.+.+.+
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALERF   80 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999999999999999998888887777654  4567889999999877777777777777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||..... .++.+.+.++|++++++|+.|++.+++++.|.|.+++ |+||++||.++.
T Consensus        81 g--~~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~  145 (258)
T PRK07890         81 G--RVDALVNNAFRVPSM-KPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLR  145 (258)
T ss_pred             C--CccEEEECCccCCCC-CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhc
Confidence            6  699999999975442 2366788999999999999999999999999987664 899999998753

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.4e-23  Score=167.28  Aligned_cols=145  Identities=30%  Similarity=0.361  Sum_probs=122.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++|+++||||++|||++++++|+++|++|++++|+++..++..+++.+.  ..+...+.+|+++..+.++.++++.+..
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999999999999999988877777776543  3456788899999877777777777777


Q ss_pred             cCCCccEEEEcCCCCCC-CcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYP-KAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.... ...++.+.+.+++++.+++|+.++++++++++|.|.+++.|+||++||.+++
T Consensus        82 ~--~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  149 (250)
T PRK07774         82 G--GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAW  149 (250)
T ss_pred             C--CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEeccccc
Confidence            6  69999999998642 1223567789999999999999999999999999988888999999998753

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.92  E-value=1.1e-23  Score=167.63  Aligned_cols=142  Identities=25%  Similarity=0.387  Sum_probs=119.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~-~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+|+++||||++|||+++|++|+++|++|++. +++.++.++..++++..  +.++..+.+|+++..+..+.++++.+..
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAEV   79 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            48999999999999999999999999998885 45555555555665543  4567788999999987777777777777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....  ++.+.+.++|++++++|+.+++.++++++|.|.+++.|+||++||.++.
T Consensus        80 ~--~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  144 (246)
T PRK12938         80 G--EIDVLVNNAGITRDV--VFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ  144 (246)
T ss_pred             C--CCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhcc
Confidence            6  699999999986543  3678899999999999999999999999999988888999999998753

>PRK07985 oxidoreductase; Provisional

Probab=99.92  E-value=1.2e-23  Score=172.20  Aligned_cols=142  Identities=15%  Similarity=0.183  Sum_probs=117.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh--hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH--NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++|+++||||++|||+++|++|+++|++|++.+|+.  +..+++.+.+.+.  +.++.++.+|++++++..+.++++.+
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~  124 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEAHK  124 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999988753  3455555555443  45677889999998878877777777


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||..... .++.+.+.++|++++++|+.|+++++++++|+|.+  .|+||++||.+++
T Consensus       125 ~~g--~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~  190 (294)
T PRK07985        125 ALG--GLDIMALVAGKQVAI-PDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAY  190 (294)
T ss_pred             HhC--CCCEEEECCCCCcCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhc
Confidence            776  699999999975321 23668899999999999999999999999999854  4899999998764

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.3e-23  Score=170.17  Aligned_cols=139  Identities=22%  Similarity=0.324  Sum_probs=119.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+|+++||||++|||++++++|+++|++|++++|+.+++++..++.     ...+..+++|++++.+..+.++.+.+.++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3789999999999999999999999999999999988776654432     33577889999998777777777777666


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                        ++|++|||||.....+  +.+.+.++|++++++|+.+++.+++.++|.|++++.++||++||.++.
T Consensus        77 --~~d~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~  140 (275)
T PRK08263         77 --RLDIVVNNAGYGLFGM--IEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGI  140 (275)
T ss_pred             --CCCEEEECCCCccccc--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc
Confidence              6899999999876544  678899999999999999999999999999988888999999998764

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.8e-23  Score=168.17  Aligned_cols=141  Identities=27%  Similarity=0.402  Sum_probs=120.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++++++||||++|||++++++|+++|++|++++|+++++++..+++ +.  +.++.++.+|++++.+..+.++.+.+ .
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~--~~~~~~~~~D~~d~~~~~~~~~~~~~-~   78 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PY--PGRHRWVVADLTSEAGREAVLARARE-M   78 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hc--CCceEEEEccCCCHHHHHHHHHHHHh-c
Confidence            45899999999999999999999999999999999998888877776 22  45788899999988766666565554 3


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....  ++.+.+.+++++++++|+.|++++++.++|+|.+++.|+||++||.++.
T Consensus        79 ~--~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~  143 (263)
T PRK09072         79 G--GINVLINNAGVNHFA--LLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGS  143 (263)
T ss_pred             C--CCCEEEECCCCCCcc--ccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhC
Confidence            3  799999999986543  3678899999999999999999999999999988888999999998764

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.7e-23  Score=168.05  Aligned_cols=139  Identities=23%  Similarity=0.302  Sum_probs=118.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||++|||++++++|+++|++|++++|+.+++++..+++.    +.++.++++|++++.+..+.++.+.+...+ 
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~-   76 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGG-   76 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCC-
Confidence            689999999999999999999999999999999988777665543    456888999999887666666665554222 


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|++|||||......  +.+.+.+++++++++|+.+++.+++++.|+|++++.++||++||.++.
T Consensus        77 ~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  140 (260)
T PRK08267         77 RLDVLFNNAGILRGGP--FEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAI  140 (260)
T ss_pred             CCCEEEECCCCCCCCc--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhC
Confidence            7999999999876543  678899999999999999999999999999998888999999998764

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.2e-23  Score=169.01  Aligned_cols=143  Identities=27%  Similarity=0.353  Sum_probs=123.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ++|+++||||++|+|++++++|+++|++|++++|+.+++++..+++.....+.++.++.+|++++.+.+. ++++.+.++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            4789999999999999999999999999999999998888877766654334578889999999877766 667666665


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                        ++|++|||||...+..  ..+.+.+++++.+++|+.|++.+++.++|.|++++.++||++||.++.
T Consensus        81 --~id~vv~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~  144 (280)
T PRK06914         81 --RIDLLVNNAGYANGGF--VEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGR  144 (280)
T ss_pred             --CeeEEEECCcccccCc--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccc
Confidence              6999999999876543  667899999999999999999999999999988888999999998653

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2e-23  Score=165.67  Aligned_cols=142  Identities=34%  Similarity=0.465  Sum_probs=123.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+|+++||||++|+|++++++|+++|++|++++|++++.++..+++++.  +.++.++.+|++++++....++.+.+.++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3689999999999999999999999999999999998888777777653  45678889999998777777777777666


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                        ++|++|||||.....+  +.+.+.+++++++++|+.+++++++.++|.|.+++.|+||++||.++.
T Consensus        83 --~id~lv~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  146 (241)
T PRK07454         83 --CPDVLINNAGMAYTGP--LLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAAR  146 (241)
T ss_pred             --CCCEEEECCCccCCCc--hhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhC
Confidence              6999999999865433  667889999999999999999999999999988888999999998753

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.91  E-value=2.1e-23  Score=167.22  Aligned_cols=139  Identities=22%  Similarity=0.306  Sum_probs=119.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     ..++..+++|++++++..+.++.+.+.+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVERF   78 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            55899999999999999999999999999999999998877766554     2357788999999988888777777776


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag  208 (210)
                      +  ++|++|||||.....+  +.+.+.++|++++++|+.+++.++++++|.|.+++ +|+||++||..+
T Consensus        79 ~--~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~  143 (257)
T PRK07067         79 G--GIDILFNNAALFDMAP--ILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAG  143 (257)
T ss_pred             C--CCCEEEECCCcCCCCC--cccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHh
Confidence            6  6999999999875433  66889999999999999999999999999998764 489999999765

>PRK12743 oxidoreductase; Provisional

Probab=99.91  E-value=2.6e-23  Score=166.67  Aligned_cols=140  Identities=25%  Similarity=0.405  Sum_probs=120.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +|+++||||++|||+++|++|+++|++|+++++ +.+.+++..++++..  +.++..+.+|+++..+.++.++++.+.++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999988865 566677777777654  56788899999999888888888887777


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEeccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAA  208 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag  208 (210)
                        ++|++|||||.....+  +.+.+.++|++++++|+.++++++++++|+|.+++ .|+||++||..+
T Consensus        80 --~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~  143 (256)
T PRK12743         80 --RIDVLVNNAGAMTKAP--FLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHE  143 (256)
T ss_pred             --CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccc
Confidence              6999999999865533  66789999999999999999999999999997764 589999999865

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.91  E-value=2.3e-23  Score=167.10  Aligned_cols=142  Identities=24%  Similarity=0.402  Sum_probs=123.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++|+++||||++|||++++++|+++|++|++++|++++.++..+++++.  +.++.++++|++++.+..+.++.+.+..
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999998888888887654  4567889999999877777777776666


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHh-HhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGM-MRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m-~~~~~g~iv~isS~ag  208 (210)
                      +  ++|++|||||.....+  ..+.+.+++++.+++|+.+++.+++.++|.| .+++.|+||++||..+
T Consensus        83 ~--~~d~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~  147 (262)
T PRK13394         83 G--SVDILVSNAGIQIVNP--IENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHS  147 (262)
T ss_pred             C--CCCEEEECCccCCCCc--hhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhh
Confidence            5  6999999999875543  5677889999999999999999999999999 6777799999999765

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.9e-23  Score=167.84  Aligned_cols=141  Identities=28%  Similarity=0.385  Sum_probs=119.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||++|||++++++|+++|++|++++|+++.+++..+++.... .....++.+|++++.+.++.++++.+..+  
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--   77 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHAAHG--   77 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHHhcC--
Confidence            479999999999999999999999999999999988888877776542 33355678999998777777777766665  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      ++|++|||||.....+  +.+.+.+++++.+++|+.|++.+++.++|.|.+++ .|+||++||.++.
T Consensus        78 ~id~lv~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~  142 (272)
T PRK07832         78 SMDVVMNIAGISAWGT--VDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGL  142 (272)
T ss_pred             CCCEEEECCCCCCCCc--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccccc
Confidence            6999999999865433  67889999999999999999999999999997653 5899999998763

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.1e-23  Score=165.13  Aligned_cols=143  Identities=28%  Similarity=0.423  Sum_probs=124.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+|+++||||++|||+++|++|+++|++|++++|+++++++..++++..  +.++.++.+|++++++.++.++.+.+.+
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAAAL   82 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999999888887777654  4568889999998877777777777666


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.+++++.+++|+.+++.+++.+.|+|.+++.|++|++||.++.
T Consensus        83 ~--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  147 (250)
T PRK12939         83 G--GLDGLVNNAGITNSKS--ATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTAL  147 (250)
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhc
Confidence            5  6999999999876543  667899999999999999999999999999988888999999997653

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2e-23  Score=166.94  Aligned_cols=136  Identities=26%  Similarity=0.275  Sum_probs=115.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++||||++|||++++++|+++|++|++++|+.++        ..  .+..+.++++|++++.+.++.++.+.+.
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   72 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TV--DGRPAEFHAADVRDPDQVAALVDAIVER   72 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hh--cCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4569999999999999999999999999999999998754        11  1446778899999987777777777776


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.++|++.+++|+.+++.+++.+.|.|.++ +.|+||++||.++.
T Consensus        73 ~~--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~  139 (252)
T PRK07856         73 HG--RLDVLVNNAGGSPYAL--AAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR  139 (252)
T ss_pred             cC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccC
Confidence            66  6999999999865433  6678999999999999999999999999999875 45899999998764

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.8e-23  Score=166.93  Aligned_cols=141  Identities=33%  Similarity=0.462  Sum_probs=120.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+|+++||||++|||++++++|+++|++|++++|+++ .++..+++...  +.++.++.+|++++.+.++.++++.+.+
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999875 44444555443  4567888999999887777777777776


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +  ++|++|||||.....+  +.+.+.+++++.+++|+.+++.+++.++|+|.+++.++||++||.++
T Consensus        81 ~--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  144 (263)
T PRK08226         81 G--RIDILVNNAGVCRLGS--FLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTG  144 (263)
T ss_pred             C--CCCEEEECCCcCCCCC--cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh
Confidence            6  6999999999865533  67888999999999999999999999999998887899999999775

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.91  E-value=2.9e-23  Score=165.98  Aligned_cols=143  Identities=25%  Similarity=0.371  Sum_probs=125.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+|+++||||+++||++++++|+++|++|++++|++++.++..++++..  +.++..+.+|++++.+..+.++.+.+..
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999999888887777653  5678889999999977777777777766


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  ..+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||.++.
T Consensus        80 ~--~~d~vi~~a~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~  144 (258)
T PRK12429         80 G--GVDILVNNAGIQHVAP--IEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGL  144 (258)
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhc
Confidence            5  6999999999876543  667889999999999999999999999999999888999999998754

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2e-23  Score=167.18  Aligned_cols=139  Identities=27%  Similarity=0.326  Sum_probs=116.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++||+++||||++|||++++++|+++|++|++++|+++++++..+++.       ..++++|++++.+.++.++++.+..
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-------~~~~~~D~~~~~~~~~~~~~~~~~~   77 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-------GLFVPTDVTDEDAVNALFDTAAETY   77 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-------CcEEEeeCCCHHHHHHHHHHHHHHc
Confidence            458999999999999999999999999999999999877666554431       1467899998877777667766665


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +  ++|++|||||...+....+.+.+.+++++.+++|+.|++++++.++|+|++++.|+||++||.++
T Consensus        78 ~--~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~  143 (255)
T PRK06057         78 G--SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVA  143 (255)
T ss_pred             C--CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhh
Confidence            5  69999999998654323466788999999999999999999999999998888899999999765

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.7e-23  Score=165.01  Aligned_cols=146  Identities=29%  Similarity=0.450  Sum_probs=123.9

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ...+.+|+++||||++|||++++++|+++|++|++++|+++++++..+++...  ..++..+.+|++++++..+.++++.
T Consensus         4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (258)
T PRK06949          4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHAE   81 (258)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999999999888887777554  3467889999998877777777776


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC--------CCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK--------KGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~--------~g~iv~isS~ag~  209 (210)
                      +.++  ++|++|||||.....+  +.+.+.++|+.++++|+.+++.++++++|.|.++.        .|++|++||..+.
T Consensus        82 ~~~~--~~d~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  157 (258)
T PRK06949         82 TEAG--TIDILVNNSGVSTTQK--LVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGL  157 (258)
T ss_pred             HhcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccccc
Confidence            6665  6999999999865433  66778999999999999999999999999998764        4799999998764

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.6e-23  Score=165.50  Aligned_cols=142  Identities=25%  Similarity=0.426  Sum_probs=118.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++.+|+++||||++|||.++|++|+++|++|++++|+++.. +..+++.    +.+...+++|++++.+..+.++++.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~   85 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL----GGNAKGLVCDVSDSQSVEAAVAAVIS   85 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            456799999999999999999999999999999999987642 2223322    34566889999988777777777777


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||.....+  +.+.+.+++++++++|+.|++++++.+.|.|++++.|+||++||.++.
T Consensus        86 ~~~--~~d~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  152 (255)
T PRK06841         86 AFG--RIDILVNSAGVALLAP--AEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGV  152 (255)
T ss_pred             HhC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhc
Confidence            765  6999999999875433  667889999999999999999999999999998888999999998753

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=4.8e-23  Score=163.32  Aligned_cols=143  Identities=37%  Similarity=0.547  Sum_probs=123.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+++++||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++++.+..+.++++.+.+
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999998888877777543  4578888999999877777777776666


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.+++++.+++|+.+++++++.+.|.|.+++.+++|++||.++.
T Consensus        83 ~--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~  147 (239)
T PRK07666         83 G--SIDILINNAGISKFGK--FLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQ  147 (239)
T ss_pred             C--CccEEEEcCccccCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhc
Confidence            5  6999999999865433  567889999999999999999999999999998888999999998653

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.91  E-value=2.8e-23  Score=164.49  Aligned_cols=135  Identities=18%  Similarity=0.191  Sum_probs=112.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +|+++||||++|||+++|++|+++|++|++++|++++..   ++++..  +  ..++.+|++++++.++.++++.+.++ 
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~--~--~~~~~~D~~~~~~~~~~~~~~~~~~~-   73 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA--G--AQCIQADFSTNAGIMAFIDELKQHTD-   73 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc--C--CEEEEcCCCCHHHHHHHHHHHHhhCC-
Confidence            689999999999999999999999999999999876532   333322  2  56788999998888887777777665 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC--CCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK--KGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~--~g~iv~isS~ag  208 (210)
                       ++|++|||||......  ..+.+.++|++++++|+.+++.+++.++|.|.+++  .|+||++||.++
T Consensus        74 -~id~lv~~ag~~~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~  138 (236)
T PRK06483         74 -GLRAIIHNASDWLAEK--PGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVV  138 (236)
T ss_pred             -CccEEEECCccccCCC--cCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhh
Confidence             6999999999764432  45778999999999999999999999999998776  689999999865

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=8e-24  Score=173.20  Aligned_cols=146  Identities=13%  Similarity=0.179  Sum_probs=102.7

Q ss_pred             cccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHh--------hCCCc-----eeEEEEEec
Q 045749           59 LKSYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQA--------ENPNT-----QINIVEYDF  123 (210)
Q Consensus        59 ~~~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~--------~~~~~-----~~~~~~~D~  123 (210)
                      .++.||+++||||+  +|||+++|++|+++|++|++.++.+ .++...+....        ...+.     +...+..|+
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            35679999999996  9999999999999999999987652 11111111100        00001     111122333


Q ss_pred             ccCc------------------cchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHH
Q 045749          124 SCDV------------------VSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT  185 (210)
Q Consensus       124 ~~~~------------------~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  185 (210)
                      ++.+                  +.++.++++.+.++  ++|+||||||.......++.+.+.++|++++++|+.|+++++
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G--~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFG--HIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcC--CCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            3332                  23555566666666  699999999975422234779999999999999999999999


Q ss_pred             HHHHHHhHhCCCCEEEEecccccc
Q 045749          186 KAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       186 ~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      |+++|+|++  +|+||+++|.++.
T Consensus       161 ~a~~p~m~~--~G~ii~iss~~~~  182 (299)
T PRK06300        161 SHFGPIMNP--GGSTISLTYLASM  182 (299)
T ss_pred             HHHHHHhhc--CCeEEEEeehhhc
Confidence            999999964  4899999998764

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.8e-23  Score=166.47  Aligned_cols=142  Identities=22%  Similarity=0.327  Sum_probs=118.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++++||+++||||++|||+++|++|+++|++|++++|++++. +..++++..  +.++.++.+|++++++....++++.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTVA   79 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            467799999999999999999999999999999999998776 666666554  45678899999998777777777777


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||......  +.+.+ ++|++.+++|+.+++.+++.++|.|.++ .|+|+++||.++.
T Consensus        80 ~~~--~id~vi~~ag~~~~~~--~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~  144 (258)
T PRK08628         80 KFG--RIDGLVNNAGVNDGVG--LEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTAL  144 (258)
T ss_pred             hcC--CCCEEEECCcccCCCc--ccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhc
Confidence            665  6999999999754322  44444 9999999999999999999999988654 5899999998753

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=5e-23  Score=164.01  Aligned_cols=143  Identities=31%  Similarity=0.411  Sum_probs=122.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+++++||||++|||++++++|+++|++|++++|+.++.++..+++..   +.++.++.+|++++.+....++++.+.+
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4589999999999999999999999999999999999888777666644   4568889999999987777777776666


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||..... .++.+.+.+++++.+++|+.|++.+++.++|.|.+++.++||++||..+.
T Consensus        80 ~--~~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  145 (251)
T PRK07231         80 G--SVDILVNNAGTTHRN-GPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGL  145 (251)
T ss_pred             C--CCCEEEECCCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc
Confidence            5  699999999975432 33667899999999999999999999999999988888999999998753

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=5.4e-23  Score=164.98  Aligned_cols=142  Identities=24%  Similarity=0.374  Sum_probs=122.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++|+++||||++|||.++|++|+++|++|++++|+.++++...+++...  +.+..++++|++++++.++.++++.+..
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999999998888877777653  4567789999999877777777777766


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHH-hHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTG-MMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~-m~~~~~g~iv~isS~ag  208 (210)
                      +  ++|++|||||.....+  ..+.+.++|++++++|+.+++++.+++.|+ |.+++.+++|++||.++
T Consensus        88 ~--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~  152 (259)
T PRK08213         88 G--HVDILVNNAGATWGAP--AEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAG  152 (259)
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhh
Confidence            5  6999999999865433  567789999999999999999999999998 77777789999999764

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.91  E-value=5.3e-23  Score=163.88  Aligned_cols=142  Identities=30%  Similarity=0.455  Sum_probs=123.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.  +.++.++++|++++++.++.++.+.+.++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQALG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4889999999999999999999999999999999998888877777654  45688899999998777777777776665


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                        ++|++|||||.....+  +.+.+.+++++.+++|+.+++++++.++|.|.+++.+++|++||.+++
T Consensus        80 --~~d~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~  143 (250)
T TIGR03206        80 --PVDVLVNNAGWDKFGP--FTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAAR  143 (250)
T ss_pred             --CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhc
Confidence              6999999999864433  667889999999999999999999999999988888999999998764

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.91  E-value=6.2e-23  Score=163.38  Aligned_cols=143  Identities=28%  Similarity=0.429  Sum_probs=121.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.+|+++||||++|||.++|++|+++|++|++..+ +++..++..+++++.  +.++.++++|++++.+..+.++++.+.
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999999999987654 556666666666543  456888999999998888777777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....  .+.+.+.+++++.+++|+.+++.+++.++|.|.+++.+++|++||.++.
T Consensus        82 ~~--~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  147 (247)
T PRK12935         82 FG--KVDILVNNAGITRDR--TFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQ  147 (247)
T ss_pred             cC--CCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhc
Confidence            66  699999999987553  3667888999999999999999999999999988888999999998764

>PRK07069 short chain dehydrogenase; Validated

Probab=99.91  E-value=6.6e-23  Score=163.42  Aligned_cols=140  Identities=27%  Similarity=0.378  Sum_probs=120.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC-hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~-~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      ++||||++|||+++++.|+++|++|++++|+ ++++++..+++....+......+++|++++++..+.++++.+.++  +
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~   79 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG--G   79 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC--C
Confidence            7999999999999999999999999999998 677777777776543334556688999999888887778777776  6


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +|++|||||.....+  +.+.+.+++++++++|+.+++.+++.++|.|++++.|+||++||.++.
T Consensus        80 id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~  142 (251)
T PRK07069         80 LSVLVNNAGVGSFGA--IEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAF  142 (251)
T ss_pred             ccEEEECCCcCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhc
Confidence            999999999876543  668899999999999999999999999999998888999999998764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=6e-23  Score=164.50  Aligned_cols=144  Identities=22%  Similarity=0.328  Sum_probs=118.2

Q ss_pred             ccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecC-----------hhHHHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           60 KSYGSWALITGATD--GIGKAFAHQLAQHGLNLILVSRN-----------HNKLEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        60 ~~~gk~vlITGass--GiG~~~a~~l~~~G~~Vi~~~r~-----------~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      ++++|+++||||++  |||.++|++|+++|++|++++|+           ..+.....+++...  +.++.++++|++++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   79 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQP   79 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCCH
Confidence            35689999999994  99999999999999999999987           22222244444432  45688899999998


Q ss_pred             ccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      .+....++++.+.++  ++|++|||||.....+  +.+.+.+++++.+++|+.|++.+.++++|.|.+++.|+||++||.
T Consensus        80 ~~~~~~~~~~~~~~g--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~  155 (256)
T PRK12748         80 YAPNRVFYAVSERLG--DPSILINNAAYSTHTR--LEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSG  155 (256)
T ss_pred             HHHHHHHHHHHHhCC--CCCEEEECCCcCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCc
Confidence            777777777777766  6999999999865433  667899999999999999999999999999988778999999998


Q ss_pred             ccc
Q 045749          207 AAI  209 (210)
Q Consensus       207 ag~  209 (210)
                      ++.
T Consensus       156 ~~~  158 (256)
T PRK12748        156 QSL  158 (256)
T ss_pred             ccc
Confidence            653

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8.1e-23  Score=165.54  Aligned_cols=144  Identities=30%  Similarity=0.473  Sum_probs=121.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +..+|+++||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++..+.+|+++..+..+.++++.+.
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            355789999999999999999999999999999999988877776666544  346778889999887777766776666


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||......  ..+.+.+++++.+++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        85 ~~--~id~vi~~Ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~  150 (274)
T PRK07775         85 LG--EIEVLVSGAGDTYFGK--LHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVAL  150 (274)
T ss_pred             cC--CCCEEEECCCcCCCcc--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhc
Confidence            65  6999999999865433  567789999999999999999999999999988888999999998653

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.4e-23  Score=166.09  Aligned_cols=138  Identities=20%  Similarity=0.334  Sum_probs=117.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .|+++||||++|||++++++|+++|++|++++|+++.+++..++.     ..++.++++|++++.+..+.++++.+..+ 
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   75 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVVDRAFAALG-   75 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHHHHHHHHcC-
Confidence            478999999999999999999999999999999987766554432     23578889999998777777777666665 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|++|||||.....+  ..+.+.+++++.+++|+.|++++++.++|+|++++.++||++||.++.
T Consensus        76 -~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  139 (276)
T PRK06482         76 -RIDVVVSNAGYGLFGA--AEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ  139 (276)
T ss_pred             -CCCEEEECCCCCCCcc--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc
Confidence             6899999999876543  567789999999999999999999999999988888999999998763

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.1e-22  Score=163.23  Aligned_cols=142  Identities=20%  Similarity=0.299  Sum_probs=119.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ..+|+++||||++|||++++++|+++|++|+++++ +.+.++++.+++...  +.++..+.+|+++..+..+.++++.+.
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~   84 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARASAA   84 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999988766 456666676666554  456788999999987777777777666


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .+  ++|++|||||.....+  +.+.+.+++++++++|+.|++++++.+.|.|.+++.|+||+++|..+
T Consensus        85 ~~--~iD~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~  149 (258)
T PRK09134         85 LG--PITLLVNNASLFEYDS--AASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRV  149 (258)
T ss_pred             cC--CCCEEEECCcCCCCCc--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhh
Confidence            65  6999999999865533  66889999999999999999999999999998877899999998654

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.91  E-value=2.9e-23  Score=167.14  Aligned_cols=137  Identities=24%  Similarity=0.370  Sum_probs=115.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++||||++|||++++++|+++|++|++++|++++.+           ..++..+++|++++.+.++.++.+.+.
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIEK   74 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            456999999999999999999999999999999999875432           235678889999998777777777777


Q ss_pred             hcCCCccEEEEcCCCCCCCc-------ccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKA-------MFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~-------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||......       ....+.+.++|++++++|+.+++++++++.|+|++++.|+||++||.++.
T Consensus        75 ~g--~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  149 (266)
T PRK06171         75 FG--RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGL  149 (266)
T ss_pred             cC--CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcccccc
Confidence            76  6999999999754321       11346789999999999999999999999999998888999999998764

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.90  E-value=9.1e-23  Score=165.10  Aligned_cols=146  Identities=25%  Similarity=0.303  Sum_probs=123.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++||||++|||++++++|+++|++|++++|++++.++..+++.......++.++++|++++++..+.++++.+.
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999998888877777665432356788899999987777767777666


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++  ++|++|||||.... ..++.+.+.+++++++++|+.+++.+++.+++.|.+++.|+|+++||.++
T Consensus        84 ~~--~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~  149 (276)
T PRK05875         84 HG--RLHGVVHCAGGSET-IGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAA  149 (276)
T ss_pred             cC--CCCEEEECCCcccC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhh
Confidence            65  68999999997543 12356788999999999999999999999999998888899999999865

>TIGR02415 23BDH acetoin reductases

Probab=99.90  E-value=7.6e-23  Score=163.41  Aligned_cols=140  Identities=24%  Similarity=0.329  Sum_probs=121.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||++|||++++++|+++|++|++++|+++++++..+++...  +.++..+.+|++++++..+.++.+.+.++  
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~--   76 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFG--   76 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcC--
Confidence            68999999999999999999999999999999988888877777654  45688899999999877777777777776  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      ++|++|||||.....+  +.+.+.++|++++++|+.+++++++.+++.|++++ +|++|++||.++.
T Consensus        77 ~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  141 (254)
T TIGR02415        77 GFDVMVNNAGVAPITP--ILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGH  141 (254)
T ss_pred             CCCEEEECCCcCCCCC--cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhc
Confidence            6999999999865433  67889999999999999999999999999998875 4899999997653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.1e-22  Score=161.30  Aligned_cols=146  Identities=21%  Similarity=0.337  Sum_probs=119.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccC--ccchhhHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD--VVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~  138 (210)
                      +++|+++||||++|||++++++|+++|++|++++|+++++++..+++.+.. +.....+++|+++.  .+..+..+++.+
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC-CCCcceEEeeecccchHHHHHHHHHHHH
Confidence            458999999999999999999999999999999999998888888876542 34567788998753  234444556666


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+++ ++|++|||||..... .++.+.+.++|++.+++|+.|++.+++.++|.|.+.+.|+++++||..+.
T Consensus        83 ~~~~-~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~  151 (239)
T PRK08703         83 ATQG-KLDGIVHCAGYFYAL-SPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE  151 (239)
T ss_pred             HhCC-CCCEEEEeccccccC-CCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc
Confidence            5522 699999999975431 23678899999999999999999999999999988888999999998664

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.90  E-value=1.1e-22  Score=161.57  Aligned_cols=140  Identities=31%  Similarity=0.468  Sum_probs=119.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++|+++||||++|||++++++|+++|+.|++.+|+.+++++..+++     +.++.++.+|+++.++.++.++++.+.+
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEADL   78 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999988877655443     3457788899998877777777777766


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.++|++++++|+.+++++++++.|.|.+++.+++|++||.++.
T Consensus        79 ~--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  143 (245)
T PRK12936         79 E--GVDILVNNAGITKDGL--FVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGV  143 (245)
T ss_pred             C--CCCEEEECCCCCCCCc--cccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhC
Confidence            6  6999999999875533  567788999999999999999999999998888778999999998653

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.1e-22  Score=161.96  Aligned_cols=138  Identities=24%  Similarity=0.278  Sum_probs=115.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++|+++||||++|||++++++|+++|++|++++|+++++++..+++     +.++.++++|+++..+..+.++.+.+..
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEAF   78 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999999999999999987776655444     3467788999998876666666777666


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.+++++++++|+.|++.++++++|+|.+  .+++|+++|.++.
T Consensus        79 ~--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~  141 (249)
T PRK06500         79 G--RLDAVFINAGVAKFAP--LEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAH  141 (249)
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhc
Confidence            5  6999999999865433  667899999999999999999999999998853  4789999887653

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.90  E-value=4.7e-24  Score=156.67  Aligned_cols=137  Identities=31%  Similarity=0.407  Sum_probs=114.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .++.|+.+++||+.-|||++++++|++.|++|+.++|+++.++.+.++.     ...+..+..|+++.       +.+.+
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-----p~~I~Pi~~Dls~w-------ea~~~   70 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-----PSLIIPIVGDLSAW-------EALFK   70 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-----CcceeeeEecccHH-------HHHHH
Confidence            4567999999999999999999999999999999999999998887764     34477888888764       33333


Q ss_pred             HhcC-CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecccccc
Q 045749          139 AIDG-LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~-~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS~ag~  209 (210)
                      .+.. +++|.||||||+....+  +.+.+.++|++.|++|+.+++..+|.....+..| .+|.|||+||.++.
T Consensus        71 ~l~~v~pidgLVNNAgvA~~~p--f~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~  141 (245)
T KOG1207|consen   71 LLVPVFPIDGLVNNAGVATNHP--FGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI  141 (245)
T ss_pred             hhcccCchhhhhccchhhhcch--HHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc
Confidence            3332 37999999999987766  8999999999999999999999999977665544 57999999998763

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1e-22  Score=183.15  Aligned_cols=144  Identities=28%  Similarity=0.396  Sum_probs=123.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||++++++|+++|++|++++|+++++++..+++...  +.++.++.+|+++.++.++.++++.+.
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~  445 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILAE  445 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            456899999999999999999999999999999999999998888888664  456888999999998888777777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCC--CHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEV--DEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~--~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||......  +.+.  +.+++++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus       446 ~g--~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  513 (657)
T PRK07201        446 HG--HVDYLVNNAGRSIRRS--VENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQ  513 (657)
T ss_pred             cC--CCCEEEECCCCCCCCC--hhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhc
Confidence            76  6999999999864432  2222  35889999999999999999999999998888999999998764

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.90  E-value=1.3e-22  Score=182.41  Aligned_cols=149  Identities=24%  Similarity=0.357  Sum_probs=127.2

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      +...+.+|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++....+......+++|++++.+..+.++++
T Consensus       408 ~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i  487 (676)
T TIGR02632       408 KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADV  487 (676)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHH
Confidence            34456799999999999999999999999999999999999888888777765443456778899999988777777777


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      .+.++  ++|++|||||.....+  +.+.+.++|+..+++|+.+++.+++.++|.|++++ .|+||++||.++.
T Consensus       488 ~~~~g--~iDilV~nAG~~~~~~--~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~  557 (676)
T TIGR02632       488 ALAYG--GVDIVVNNAGIATSSP--FEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAV  557 (676)
T ss_pred             HHhcC--CCcEEEECCCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhc
Confidence            77776  6999999999865433  66888999999999999999999999999998775 5799999998654

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.90  E-value=2.1e-22  Score=160.70  Aligned_cols=138  Identities=28%  Similarity=0.507  Sum_probs=116.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      ++++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|++++.+.++.++++.+.++  
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~--   73 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWR--   73 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcC--
Confidence            36899999999999999999999999999999988877665543     34577889999998777777777766665  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|++|||||.... ..+..+.+.++|++++++|+.|++.+++.++|+|.+++.++||++||.++.
T Consensus        74 ~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  138 (248)
T PRK10538         74 NIDVLVNNAGLALG-LEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS  138 (248)
T ss_pred             CCCEEEECCCccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC
Confidence            69999999997532 123567899999999999999999999999999998888999999998653

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.4e-22  Score=163.90  Aligned_cols=133  Identities=26%  Similarity=0.358  Sum_probs=111.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||++|||++++++|+++|++|++++|+++++++..    .    .....+.+|++++.+.++.++.+.+..+  
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--   71 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----A----AGFTAVQLDVNDGAALARLAEELEAEHG--   71 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H----CCCeEEEeeCCCHHHHHHHHHHHHHhcC--
Confidence            68999999999999999999999999999999987665432    2    1356788999988777776677666655  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|++|||||.....+  +.+.+.+++++.+++|+.|++.+++.++|.|.++ .|+||++||.+|.
T Consensus        72 ~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~  134 (274)
T PRK05693         72 GLDVLINNAGYGAMGP--LLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGV  134 (274)
T ss_pred             CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCcccc
Confidence            6999999999865543  6678999999999999999999999999998654 5899999998774

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.3e-22  Score=158.98  Aligned_cols=138  Identities=25%  Similarity=0.320  Sum_probs=115.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||++|||++++++|+++|++|++++|++++.++..+++... ++.++.++++|++++.+.++.++++    .. 
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~----~~-   75 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASHAAFLDSL----PA-   75 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHHHHHHHHH----hh-
Confidence            68999999999999999999999999999999998888777777554 3567889999999875444433332    22 


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|++|||||......  ..+.+.+++++.+++|+.+++++++++.|+|.+++.|++|++||.++.
T Consensus        76 ~~d~vv~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  139 (243)
T PRK07102         76 LPDIVLIAVGTLGDQA--ACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGD  139 (243)
T ss_pred             cCCEEEECCcCCCCcc--cccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEeccccc
Confidence            4799999999765533  567889999999999999999999999999998888999999998764

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=3.5e-22  Score=159.17  Aligned_cols=146  Identities=27%  Similarity=0.373  Sum_probs=119.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecc--cCccchhhHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS--CDVVSAGNIKAIE  137 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~  137 (210)
                      .+.+|+++||||++|||.+++++|+++|++|++++|+.+++++..+++++.. ..+..++.+|++  ++.+..+.++.+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHHH
Confidence            4569999999999999999999999999999999999988888877776543 345667777875  3334444455565


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|++|||||..... .++.+.+.++|++.+++|+.|++++++.++|.|.+++.++||++||.++.
T Consensus        88 ~~~~--~id~vi~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~  156 (247)
T PRK08945         88 EQFG--RLDGVLHNAGLLGEL-GPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR  156 (247)
T ss_pred             HHhC--CCCEEEECCcccCCC-CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhc
Confidence            5555  699999999976442 23567789999999999999999999999999999888999999998653

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.1e-22  Score=159.31  Aligned_cols=142  Identities=27%  Similarity=0.358  Sum_probs=117.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~-r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +|+++||||++|||.+++++|+++|++|++.+ |++++.++..++++..  +.+...+++|++++.+..+.++++.+.++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999998887 4555666666666543  44677889999998887877777777776


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC---CCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK---KGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~---~g~iv~isS~ag~  209 (210)
                        ++|++|||||..... ..+.+.+.++|++++++|+.+++.+++.++|.|.++.   +|+||++||.++.
T Consensus        80 --~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~  147 (248)
T PRK06123         80 --RLDALVNNAGILEAQ-MRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR  147 (248)
T ss_pred             --CCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhc
Confidence              699999999986542 2356789999999999999999999999999997653   5789999998753

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.89  E-value=4.1e-22  Score=157.89  Aligned_cols=140  Identities=30%  Similarity=0.445  Sum_probs=118.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      |+++||||++|||++++++|+++|++|++++| ++++.++..+++...  +.++.++.+|++++.+..+.++.+.+..+ 
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   77 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELG-   77 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcC-
Confidence            68999999999999999999999999999988 666666655555433  45688899999998777777777776665 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|++|||||.....+  +.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||.++.
T Consensus        78 -~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~  141 (242)
T TIGR01829        78 -PIDVLVNNAGITRDAT--FKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQ  141 (242)
T ss_pred             -CCcEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc
Confidence             6999999999875533  668899999999999999999999999999998888999999998653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.4e-22  Score=159.61  Aligned_cols=143  Identities=29%  Similarity=0.372  Sum_probs=122.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.+|+++||||++|||++++++|+++|++ |++++|+.++.++..+++.+.  +.++.++.+|++++++..+.++.+.+.
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999999999 999999988877777777543  557788899999987777777777776


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.++|++++++|+.|++.+++.++|.|.+++ .|++|++||.+++
T Consensus        82 ~g--~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~  148 (260)
T PRK06198         82 FG--RLDALVNAAGLTDRGT--ILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAH  148 (260)
T ss_pred             hC--CCCEEEECCCcCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccc
Confidence            66  6999999999875433  66789999999999999999999999999997764 5899999998763

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=4.4e-22  Score=159.18  Aligned_cols=143  Identities=24%  Similarity=0.339  Sum_probs=118.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~-~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|+++||||++|||.++|++|+++|++|++++|+. +..++..++++..  +.++.++.+|++++.+..+.++.+.+.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999999999864 4455555555443  45688899999998777777777777776


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCC------CEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK------GAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~------g~iv~isS~ag~  209 (210)
                        ++|++|||||.......++.+.+.+++++.+++|+.+++++++.++|.|.+++.      ++||++||.++.
T Consensus        80 --~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  151 (256)
T PRK12745         80 --RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI  151 (256)
T ss_pred             --CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc
Confidence              699999999986543334677889999999999999999999999999987653      579999998763

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=5.1e-22  Score=158.46  Aligned_cols=142  Identities=17%  Similarity=0.284  Sum_probs=114.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++|+++||||++|||+++|++|+++|++|++.++ ++++.++..+++     +.++.++++|++++.+..+.++++.+.
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-----GDRAIALQADVTDREQVQAMFATATEH   77 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999999999988765 455544443332     246778899999887777777777766


Q ss_pred             hcCCCccEEEEcCCCCCC----CcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYP----KAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .+. ++|++|||||....    ....+.+.+.++|++++++|+.+++++++.++|+|.+++.|+||++||..+
T Consensus        78 ~g~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  149 (253)
T PRK08642         78 FGK-PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLF  149 (253)
T ss_pred             hCC-CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccc
Confidence            653 49999999987421    112366889999999999999999999999999998887899999999754

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.89  E-value=5e-22  Score=158.15  Aligned_cols=143  Identities=29%  Similarity=0.398  Sum_probs=124.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+|+++||||++++|++++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++++.+..+.++.+.+.+
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            35889999999999999999999999999999999988888777777654  3457888999998877777777777776


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.+++++.+++|+.+++.+.+.++|.|.+++.+++|++||..+.
T Consensus        82 ~--~~d~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~  146 (251)
T PRK12826         82 G--RLDILVANAGIFPLTP--FAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGP  146 (251)
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhh
Confidence            6  6999999999876543  667889999999999999999999999999988888999999998764

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.4e-22  Score=162.09  Aligned_cols=143  Identities=23%  Similarity=0.381  Sum_probs=118.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh-HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN-KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~-~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++++|+++||||++|||.++|++|+++|++|++++|+.+ .+++..++++..  +.++.++.+|++++++..+.++++.+
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            466899999999999999999999999999999999864 345555555432  45678899999998877777777777


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||..... ..+.+.+.++|++++++|+.+++.++++++|.|.+  .|+||++||.+++
T Consensus       121 ~~~--~iD~lI~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~  186 (290)
T PRK06701        121 ELG--RLDILVNNAAFQYPQ-QSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGY  186 (290)
T ss_pred             HcC--CCCEEEECCcccCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEeccccc
Confidence            766  699999999976432 23668899999999999999999999999998843  4899999998764

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.89  E-value=6.5e-22  Score=157.57  Aligned_cols=142  Identities=25%  Similarity=0.346  Sum_probs=117.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~-r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|+++||||++|||.++|++|+++|++|+++. |+++++++..++++..  +.++..+++|++++.+..+.++++.+.++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999998764 6777777777777553  45688899999998777777777766665


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC---CCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK---KGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~---~g~iv~isS~ag~  209 (210)
                        ++|++|||||..... ..+.+.+.+++++++++|+.+++.+++.++|.|..++   .|+||++||.++.
T Consensus        80 --~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~  147 (248)
T PRK06947         80 --RLDALVNNAGIVAPS-MPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASR  147 (248)
T ss_pred             --CCCEEEECCccCCCC-CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc
Confidence              699999999986542 2356788999999999999999999999999987654   5789999998764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.89  E-value=5.4e-22  Score=157.49  Aligned_cols=140  Identities=30%  Similarity=0.442  Sum_probs=115.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh-HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN-KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~-~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      |+++||||++|||.++|++|+++|++|++++|+.+ ..++..++...  .+.++.++.+|++++.+..+.++.+.+.++ 
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~-   79 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEG-   79 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            68999999999999999999999999999999854 22222222221  245688899999998777777777777666 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|++|||||.....+  +.+.+.++|++++++|+.+++++++.++|.|.+++.++||++||..+.
T Consensus        80 -~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~  143 (245)
T PRK12824         80 -PVDILVNNAGITRDSV--FKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGL  143 (245)
T ss_pred             -CCCEEEECCCCCCCCc--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhc
Confidence             6999999999875533  668899999999999999999999999999988888999999998763

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.89  E-value=5.4e-22  Score=158.33  Aligned_cols=140  Identities=32%  Similarity=0.492  Sum_probs=114.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH--HHHHHHHHHhhCCC-ceeEEEEEeccc-CccchhhHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK--LEKISNEIQAENPN-TQINIVEYDFSC-DVVSAGNIKAI  136 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~--l~~~~~~l~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~~  136 (210)
                      ..+|+++||||++|||+++|++|+++|++|+++.|+.+.  .++..+...  ..+ ....+..+|+++ ..+.+..++.+
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~~~   80 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVAAA   80 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence            458999999999999999999999999999888887654  344433333  112 367788899998 77777777788


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .+.++  ++|++|||||..... .++.+.+.++|++++++|+.|++.+++.+.|.|+++   +||++||.++
T Consensus        81 ~~~~g--~id~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~  146 (251)
T COG1028          81 EEEFG--RIDILVNNAGIAGPD-APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAG  146 (251)
T ss_pred             HHHcC--CCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchh
Confidence            77766  599999999997652 137788999999999999999999999888888733   9999999976

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=6.7e-22  Score=157.04  Aligned_cols=142  Identities=30%  Similarity=0.485  Sum_probs=122.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~-~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.+|+++||||++|||.+++++|+++|++|+++ +|++++.++..+++...  +.++.++.+|++++.+..+.++.+.+.
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            558899999999999999999999999999999 99988887777776653  456888999999987777777777666


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++  ++|++|||||.....  ...+.+.+++++.+++|+.+++.+++.++|.+.+++.+++|++||..+
T Consensus        81 ~~--~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~  145 (247)
T PRK05565         81 FG--KIDILVNNAGISNFG--LVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWG  145 (247)
T ss_pred             hC--CCCEEEECCCcCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhh
Confidence            65  699999999987443  366789999999999999999999999999999888899999999765

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-21  Score=156.88  Aligned_cols=135  Identities=25%  Similarity=0.339  Sum_probs=112.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +|+++||||++|||++++++|+++|++|++++|++++.++..+.....  +.++.++.+|++++.+    +++   ....
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~----~~~---~~~~   72 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAID----RAQ---AAEW   72 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHH----HHH---HhcC
Confidence            678999999999999999999999999999999988777766655544  3457788899887732    222   2222


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|++|||||.....+  ..+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||.+|.
T Consensus        73 -~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~  136 (257)
T PRK09291         73 -DVDVLLNNAGIGEAGA--VVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGL  136 (257)
T ss_pred             -CCCEEEECCCcCCCcC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhc
Confidence             6999999999876543  678899999999999999999999999999988888999999998764

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.9e-22  Score=156.98  Aligned_cols=140  Identities=24%  Similarity=0.341  Sum_probs=117.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~-~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .++|+++||||++|||+++|++|+++|++|+++.|+. +..++..+++...  +.++.++.+|+++..+.++.++++.+.
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4589999999999999999999999999998887754 4456666666553  457888999999988777777777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++  ++|++|||||.....  ++.+.+.++|++++++|+.+++.++++++|.|.+  .|+||++||.++
T Consensus        81 ~~--~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~  143 (245)
T PRK12937         81 FG--RIDVLVNNAGVMPLG--TIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVI  143 (245)
T ss_pred             cC--CCCEEEECCCCCCCC--ChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccc
Confidence            76  699999999986543  3667889999999999999999999999998853  489999999765

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.89  E-value=4.1e-22  Score=152.14  Aligned_cols=143  Identities=24%  Similarity=0.425  Sum_probs=115.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHH-cCCeEEE-EecChhHHHHHHHHHHhh-CCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQ-HGLNLIL-VSRNHNKLEKISNEIQAE-NPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~-~G~~Vi~-~~r~~~~l~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .|.++||||.+|||+.++++|.+ .|-.+++ +.|+.++.   .+++... ..+.++++++.|+++|++..+.++++++.
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~i   79 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKI   79 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence            45699999999999999999986 4666554 56667764   2223222 12678999999999999999999999998


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-----------CCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-----------KGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-----------~g~iv~isS~ag  208 (210)
                      .+...+|+|+||||+..+.. ...+.+.+.|.+.+++|..|++.++|+++|++++..           ++.|||+||.+|
T Consensus        80 Vg~~GlnlLinNaGi~~~y~-~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~  158 (249)
T KOG1611|consen   80 VGSDGLNLLINNAGIALSYN-TVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAG  158 (249)
T ss_pred             cccCCceEEEeccceeeecc-cccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccc
Confidence            87778999999999987643 245667899999999999999999999999887643           247999999876


Q ss_pred             c
Q 045749          209 I  209 (210)
Q Consensus       209 ~  209 (210)
                      .
T Consensus       159 s  159 (249)
T KOG1611|consen  159 S  159 (249)
T ss_pred             c
Confidence            3

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.2e-22  Score=160.56  Aligned_cols=129  Identities=22%  Similarity=0.295  Sum_probs=107.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +|+++|||| +|||+++|++|+ +|++|++++|+++++++..++++..  +.++.++++|++++++..+.++.+ +.++ 
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g-   75 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLG-   75 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcC-
Confidence            689999998 699999999996 8999999999998888877777653  457788999999987777766665 3344 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|++|||||...         +.++|++++++|+.|++++++.++|.|.++  |++|++||.++.
T Consensus        76 -~id~li~nAG~~~---------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~  130 (275)
T PRK06940         76 -PVTGLVHTAGVSP---------SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGH  130 (275)
T ss_pred             -CCCEEEECCCcCC---------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccc
Confidence             7999999999742         236789999999999999999999998643  788999998764

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.89  E-value=7.6e-22  Score=156.36  Aligned_cols=138  Identities=25%  Similarity=0.414  Sum_probs=114.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC-hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~-~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      ++||||++|||+++|++|+++|++|++++|+ ++++++..+++++.  +.++.++++|++++.+..+.++++.+..+  +
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--~   76 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHG--A   76 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcC--C
Confidence            5899999999999999999999999998865 45666776777654  45688899999998777777776666665  6


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHH-HHhHhCCCCEEEEecccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVL-TGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l-~~m~~~~~g~iv~isS~ag~  209 (210)
                      +|++|||||.....+  +.+.+.++|++++++|+.|++++++.++ |.+.+++.|+||++||.++.
T Consensus        77 i~~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~  140 (239)
T TIGR01831        77 YYGVVLNAGITRDAA--FPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGV  140 (239)
T ss_pred             CCEEEECCCCCCCCc--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhc
Confidence            999999999875543  6678999999999999999999999886 55555677999999998764

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.89  E-value=9.4e-22  Score=155.55  Aligned_cols=140  Identities=29%  Similarity=0.426  Sum_probs=118.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ..+++++||||+++||++++++|+++|++|++++|+++++++..+++...   .++..+++|+++..+..+.++.+.+.+
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAF   80 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45799999999999999999999999999999999998888777777542   467788999988876666666666665


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +  ++|++|||||.....+  +.+.+.+++++++++|+.+++++++++++.| +++.|+||++||.++
T Consensus        81 ~--~~d~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~  143 (237)
T PRK07326         81 G--GLDVLIANAGVGHFAP--VEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAG  143 (237)
T ss_pred             C--CCCEEEECCCCCCCCc--hhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhh
Confidence            5  6999999999765533  6678999999999999999999999999988 455689999999875

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.89  E-value=8.1e-22  Score=157.31  Aligned_cols=135  Identities=27%  Similarity=0.392  Sum_probs=116.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++++|+++||||++|||++++++|+++|++|++++|+.         +...  +.++..+++|++++++..+.++++.+
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAAVAQVCQRLLA   72 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            346689999999999999999999999999999999986         1111  44678889999999877777777777


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .++  ++|++|||||.....+  +.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..+
T Consensus        73 ~~~--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~  138 (252)
T PRK08220         73 ETG--PLDVLVNAAGILRMGA--TDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAA  138 (252)
T ss_pred             HcC--CCCEEEECCCcCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchh
Confidence            766  6999999999865533  67889999999999999999999999999999888899999999765

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-21  Score=156.69  Aligned_cols=143  Identities=24%  Similarity=0.372  Sum_probs=118.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~-~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++++++||||++|||.++|++|+++|++|++. .|+++++++..+++...  +.++.++++|++++++..+.++++.+.
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~   81 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKNE   81 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence            458999999999999999999999999998775 78887777776666543  456788899999998777777777776


Q ss_pred             hc----CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 ID----GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~----~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++    ..++|++|||||.....+  +.+.+.+.|++++++|+.|++++++.++|.|.+  .|++|++||..+.
T Consensus        82 ~~~~~~~~~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~  151 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIGTQGT--IENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVR  151 (254)
T ss_pred             hccccCCCCccEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhc
Confidence            62    126999999999865533  668899999999999999999999999998854  3799999998653

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.88  E-value=9.8e-22  Score=157.58  Aligned_cols=140  Identities=21%  Similarity=0.272  Sum_probs=111.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC----hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN----HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~----~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      ++.+|+++||||++|||+++|++|+++|++|++++++    .+..++..+++...  +.++..+++|++++++.++.++.
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHHH
Confidence            3568999999999999999999999999997776543    34455555555543  45678889999998777777777


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEe-cccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNI-GSGA  207 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~i-sS~a  207 (210)
                      +.+.++  ++|++|||||.....+  +.+.+.++|++++++|+.|++.++++++|+|.++  |+++++ ||.+
T Consensus        83 ~~~~~~--~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~iv~~~ss~~  149 (257)
T PRK12744         83 AKAAFG--RPDIAINTVGKVLKKP--IVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLL  149 (257)
T ss_pred             HHHhhC--CCCEEEECCcccCCCC--cccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCEEEEecchh
Confidence            777666  6999999999865533  6678999999999999999999999999988543  677765 5543

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.3e-21  Score=157.32  Aligned_cols=140  Identities=32%  Similarity=0.479  Sum_probs=119.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +++++||||++|||++++++|+++|++|++++|++++.++..+++...  +.++.++.+|++++.+..+.++.+.+.++ 
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-   77 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFG-   77 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcC-
Confidence            468999999999999999999999999999999988888777777654  45678889999998777777777766665 


Q ss_pred             CCccEEEEcCCCCCCCcccccCC-CHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEV-DEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|++|||||......  +.+. +.|++++.+++|+.+++.+++.+.|.|.++ .+++|++||..+.
T Consensus        78 -~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~  141 (263)
T PRK06181         78 -GIDILVNNAGITMWSR--FDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGL  141 (263)
T ss_pred             -CCCEEEECCCcccccc--hhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEeccccc
Confidence             6999999999876543  5667 899999999999999999999999988765 4899999998753

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=1.8e-21  Score=155.10  Aligned_cols=143  Identities=27%  Similarity=0.348  Sum_probs=118.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++|++++||||++|||.+++++|+++|++|++++|+++++++..+++++.  +.++..+++|++++.+.++.++.+.+..
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAEDF   80 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999998888887777654  4567888999998866666666666555


Q ss_pred             cCCCccEEEEcCCCCCCCc------ccc-cCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecccc
Q 045749          141 DGLEVGVLINNVGITYPKA------MFF-HEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGSGA  207 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~------~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS~a  207 (210)
                      +  ++|++|||||......      ..+ .+.+.++++.++++|+.|++.+++.++|.|.++ ..|+|+++||.+
T Consensus        81 ~--~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~  153 (253)
T PRK08217         81 G--QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA  153 (253)
T ss_pred             C--CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc
Confidence            5  6999999999754321      011 567889999999999999999999999999876 457899999864

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.6e-21  Score=156.17  Aligned_cols=138  Identities=28%  Similarity=0.434  Sum_probs=118.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +|+++||||++|||++++++|+++|++|++++|+.+++++..+++.    +.++..+.+|+++.++....++++.+.++ 
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   76 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAAERG-   76 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcC-
Confidence            6799999999999999999999999999999999888877766652    34678889999988777666677766665 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       ++|++|||||.....+  +.+.+.++|++.+++|+.+++.+.++++|.|.+++.++||++||.++
T Consensus        77 -~~d~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  139 (257)
T PRK07074         77 -PVDVLVANAGAARAAS--LHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNG  139 (257)
T ss_pred             -CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh
Confidence             6899999999876533  66788999999999999999999999999998888899999999754

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.88  E-value=2.6e-21  Score=153.37  Aligned_cols=142  Identities=32%  Similarity=0.523  Sum_probs=121.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+|+++||||++++|++++++|+++|++|++++|++++.++..++++..  +.++.++.+|++++.+..+.++.+.+.+
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            34789999999999999999999999999999999998888777777654  4568888899998877777666666666


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +  ++|++|||||.....+  ..+.+.+++++.++.|+.+++.+++.+.|+|.+.+.++||++||..+
T Consensus        81 ~--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~  144 (246)
T PRK05653         81 G--ALDILVNNAGITRDAL--LPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSG  144 (246)
T ss_pred             C--CCCEEEECCCcCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh
Confidence            5  6999999999866533  56788999999999999999999999999998887899999999765

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.88  E-value=1.5e-21  Score=157.44  Aligned_cols=141  Identities=22%  Similarity=0.243  Sum_probs=107.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH----HH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI----EM  138 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----~~  138 (210)
                      ++++||||++|||++++++|+++|++|++++| +++++++..+++.... +.+...+.+|++++.+..+.++++    .+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            58999999999999999999999999999765 5677777777775433 345667899999987664444443    33


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCH-----------HHHHHHhHhhhhHHHHHHHHHHHHhHhC------CCCEEE
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDE-----------KEWMDIVRVNLEGTTRVTKAVLTGMMRR------KKGAIV  201 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~-----------~~~~~~~~vN~~g~~~l~~~~l~~m~~~------~~g~iv  201 (210)
                      .++  ++|+||||||...+.+  +.+.+.           ++|++++++|+.+++.++++++|+|+++      +.++|+
T Consensus        81 ~~g--~iD~lv~nAG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv  156 (267)
T TIGR02685        81 AFG--RCDVLVNNASAFYPTP--LLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIV  156 (267)
T ss_pred             ccC--CceEEEECCccCCCCc--ccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEE
Confidence            334  6999999999865433  323232           3689999999999999999999998653      246899


Q ss_pred             Eecccccc
Q 045749          202 NIGSGAAI  209 (210)
Q Consensus       202 ~isS~ag~  209 (210)
                      +++|.++.
T Consensus       157 ~~~s~~~~  164 (267)
T TIGR02685       157 NLCDAMTD  164 (267)
T ss_pred             Eehhhhcc
Confidence            99997653

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.9e-21  Score=153.58  Aligned_cols=143  Identities=30%  Similarity=0.457  Sum_probs=117.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec----ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR----NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r----~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      +.+++++||||++|||+++|++|+++|++|++++|    +++..++..+++...  +.++.++.+|++++.+.++.++.+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            34789999999999999999999999999999765    344555555555443  457888999999987777777777


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHH-HHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVL-TGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l-~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+..+  ++|++|||||.....+  +.+.+.++|++.+++|+.+++.+++.+. |.|.+++.+++|++||.++.
T Consensus        82 ~~~~~--~~d~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~  151 (249)
T PRK12827         82 VEEFG--RLDILVNNAGIATDAA--FAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGV  151 (249)
T ss_pred             HHHhC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhc
Confidence            66665  6999999999876533  6678899999999999999999999999 66666677899999998764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.88  E-value=2.5e-21  Score=154.50  Aligned_cols=140  Identities=26%  Similarity=0.363  Sum_probs=119.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +|+++||||++++|++++++|+++|++|++++|+.+..++..+++...  +.++..+.+|+++..+..+.++.+.+..+ 
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   77 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFG-   77 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcC-
Confidence            478999999999999999999999999999999988888777776543  45688889999998777776677766665 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       ++|++|||||.....+  ..+.+.+++++++++|+.|++.+++.++|.|.+.+.+++|++||.++
T Consensus        78 -~~d~vi~~a~~~~~~~--~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~  140 (255)
T TIGR01963        78 -GLDILVNNAGIQHVAP--IEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHG  140 (255)
T ss_pred             -CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhh
Confidence             5999999999875533  55778899999999999999999999999998888899999999764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.6e-21  Score=152.93  Aligned_cols=131  Identities=24%  Similarity=0.267  Sum_probs=103.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      ++++||||++|||++++++|+++|++|++++|+++++++..++      ..++.++++|++++++.++    +.+.... 
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~----~~~~~~~-   70 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ------SANIFTLAFDVTDHPGTKA----ALSQLPF-   70 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh------cCCCeEEEeeCCCHHHHHH----HHHhccc-
Confidence            6899999999999999999999999999999998776654332      2356788999988744443    3333332 


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+|++|||||.....+  ..+.+.++|++++++|+.|++++++.++|+|.+  .+++|++||.++.
T Consensus        71 ~~d~~i~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~  132 (240)
T PRK06101         71 IPELWIFNAGDCEYMD--DGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASE  132 (240)
T ss_pred             CCCEEEEcCcccccCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhc
Confidence            4789999999753322  345789999999999999999999999998843  4789999998764

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.4e-21  Score=153.92  Aligned_cols=128  Identities=13%  Similarity=0.267  Sum_probs=99.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      .++||||++|||++++++|+++|++|++++|+++++++..+++       +...+++|++++.+.++.    .+...+ +
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~----~~~~~~-~   69 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEA----RGLFPH-H   69 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHH----HHHHhh-c
Confidence            4899999999999999999999999999999988877665443       245677888877544443    333322 5


Q ss_pred             ccEEEEcCCCCCC----CcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          145 VGVLINNVGITYP----KAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       145 id~lvnnAg~~~~----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +|++|||||....    ....+.+ +.++|++++++|+.++++++|+++|+|++  +|+||++||.+
T Consensus        70 id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~  133 (223)
T PRK05884         70 LDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN  133 (223)
T ss_pred             CcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC
Confidence            8999999985321    1112334 57899999999999999999999999954  48999999965

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.8e-21  Score=151.83  Aligned_cols=142  Identities=26%  Similarity=0.375  Sum_probs=119.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++||||+++||++++++|+++|++|++++|++++.++..+++...    ....+.+|+++..+.++.++++.+.
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~   79 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD----ALRIGGIDLVDPQAARRAVDEVNRQ   79 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc----CceEEEeecCCHHHHHHHHHHHHHH
Confidence            355899999999999999999999999999999999988777666655432    3456779999887777777777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.+++++.+++|+.+++.++++++|.|.+++.+++|++||..+.
T Consensus        80 ~~--~~d~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  145 (239)
T PRK12828         80 FG--RLDALVNIAGAFVWGT--IADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAAL  145 (239)
T ss_pred             hC--CcCEEEECCcccCcCC--hhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhc
Confidence            66  6999999999765432  557789999999999999999999999999988888999999998653

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.87  E-value=4.3e-21  Score=152.46  Aligned_cols=141  Identities=25%  Similarity=0.367  Sum_probs=117.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEE-EecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~-~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      |+++||||++|||++++++|+++|++|++ ..|++++.++..++++..  +.++..+++|++++.+.++.++.+.+..+ 
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~-   78 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDE-   78 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCC-
Confidence            58999999999999999999999999977 468877777777777654  45678889999998777777777766655 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC---CCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK---KGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~---~g~iv~isS~ag~  209 (210)
                       ++|++|||||..... ....+.+.++|+..+++|+.+++++++.+++.|.++.   +|++|++||.++.
T Consensus        79 -~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~  146 (247)
T PRK09730         79 -PLAALVNNAGILFTQ-CTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASR  146 (247)
T ss_pred             -CCCEEEECCCCCCCC-CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc
Confidence             699999999975332 2356789999999999999999999999999998763   5789999998764

>PRK06720 hypothetical protein; Provisional

Probab=99.87  E-value=6.6e-21  Score=143.70  Aligned_cols=143  Identities=20%  Similarity=0.250  Sum_probs=114.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++.+++..+++...  +.+..++.+|+++..+..+.++++.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~~   89 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITLN   89 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999999998888877777643  34567788999988777777777777


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-------CCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-------KGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-------~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||..... .++.+.++++ ++  .+|+.+++..++.+.+.|++++       .||+..+||.++.
T Consensus        90 ~~G--~iDilVnnAG~~~~~-~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         90 AFS--RIDMLFQNAGLYKID-SIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             HcC--CCCEEEECCCcCCCC-CcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            666  699999999987643 2344545555 44  6777888889999999987764       4889999987764

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=7.7e-21  Score=151.55  Aligned_cols=141  Identities=23%  Similarity=0.271  Sum_probs=116.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++++++||||++|||++++++|+++|++|++..| +.+..++..+.+++.  +.+...+.+|++++.+..+.++++.+.
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999999999988765 444555555555543  346778899999998777777777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.+++++.+++|+.+++.+++.+.|+|.+  .|++|++||.+++
T Consensus        82 ~~--~~d~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~  145 (252)
T PRK06077         82 YG--VADILVNNAGLGLFSP--FLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGI  145 (252)
T ss_pred             cC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhcc
Confidence            76  6999999999865543  667888999999999999999999999998855  3899999998764

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.8e-21  Score=153.46  Aligned_cols=130  Identities=18%  Similarity=0.178  Sum_probs=96.3

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      +.+++||+++||||++|||+++|++|+++|++|++++|++.+..+   +. ..  .. ...+.+|++++.       .+.
T Consensus         9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~--~~-~~~~~~D~~~~~-------~~~   74 (245)
T PRK12367          9 QSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DE--SP-NEWIKWECGKEE-------SLD   74 (245)
T ss_pred             HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-cc--CC-CeEEEeeCCCHH-------HHH
Confidence            345679999999999999999999999999999999998632111   11 11  11 256778887662       233


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC---CCCEEEEeccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR---KKGAIVNIGSGAA  208 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~---~~g~iv~isS~ag  208 (210)
                      +.++  ++|++|||||...     ..+.+.++|++++++|+.|+++++|.++|.|+++   +++.+++.||.++
T Consensus        75 ~~~~--~iDilVnnAG~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~  141 (245)
T PRK12367         75 KQLA--SLDVLILNHGINP-----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAE  141 (245)
T ss_pred             HhcC--CCCEEEECCccCC-----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccc
Confidence            4444  6999999999743     2356889999999999999999999999999774   2334544456554

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=3.1e-21  Score=152.49  Aligned_cols=129  Identities=29%  Similarity=0.380  Sum_probs=106.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++|+++||||++|||++++++|+++|++|++++|+....      .     ..++..+.+|++++      ++++.+.+
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~------~~~~~~~~   65 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L-----SGNFHFLQLDLSDD------LEPLFDWV   65 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CCcEEEEECChHHH------HHHHHHhh
Confidence            5689999999999999999999999999999999985431      0     23567788888765      45555555


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.... ..++.+.+.+++++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        66 ~--~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  131 (235)
T PRK06550         66 P--SVDILCNTAGILDD-YKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASF  131 (235)
T ss_pred             C--CCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc
Confidence            5  69999999997532 123567899999999999999999999999999988888999999998764

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.9e-21  Score=154.14  Aligned_cols=139  Identities=27%  Similarity=0.385  Sum_probs=110.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~-~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      |+++||||++|||+++|++|+++|++|++++|++ +.+++..    +.. +.++.++++|++++++.++.++++.+.++.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA----EQY-NSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH----hcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            6899999999999999999999999999999987 3333322    211 346778899999987777777776665543


Q ss_pred             CC--ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEeccccc
Q 045749          143 LE--VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~--id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS~ag  208 (210)
                      .+  .+++|||||...+. .++.+.+.++|++.+++|+.+++.+++.++|+|+++ ..|+||++||.++
T Consensus        77 ~~~~~~~~v~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  144 (251)
T PRK06924         77 DNVSSIHLINNAGMVAPI-KPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAA  144 (251)
T ss_pred             ccCCceEEEEcceecccC-cccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhh
Confidence            22  23899999986442 346788999999999999999999999999999875 3579999999765

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.87  E-value=9.5e-21  Score=150.28  Aligned_cols=142  Identities=32%  Similarity=0.462  Sum_probs=118.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh-HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN-KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~-~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.+|+++||||++|||++++++|+++|++|++..|+.+ ..++..++++..  +.++..+.+|++++.+..+.++++.+.
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKAE   80 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999988887654 355555555443  457888889999987777766777666


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++  ++|++|||||.....+  ..+.+.+++++.+++|+.+++.+.+.++|.+.+++.+++|++||.++
T Consensus        81 ~~--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~  145 (248)
T PRK05557         81 FG--GVDILVNNAGITRDNL--LMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVG  145 (248)
T ss_pred             cC--CCCEEEECCCcCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEccccc
Confidence            65  6899999999876533  55778999999999999999999999999998887889999999765

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.87  E-value=2e-21  Score=154.44  Aligned_cols=133  Identities=30%  Similarity=0.460  Sum_probs=115.9

Q ss_pred             cCC--ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh-cCCCcc
Q 045749           70 GAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI-DGLEVG  146 (210)
Q Consensus        70 Gas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~~id  146 (210)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.+..+ .+  ++++|++++.+.++.++++.+.+ +  ++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~~~~g--~iD   75 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVERFGG--RID   75 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHHHHCS--SES
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHhhcCC--CeE
Confidence            566  9999999999999999999999999998888888877654 33  59999999988888889999988 6  799


Q ss_pred             EEEEcCCCCCC--CcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          147 VLINNVGITYP--KAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       147 ~lvnnAg~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|||+|...+  ...++.+.+.++|++.+++|+.+++.++|++.|+|.++  |+||++||.++.
T Consensus        76 ~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~  138 (241)
T PF13561_consen   76 ILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQ  138 (241)
T ss_dssp             EEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGT
T ss_pred             EEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhc
Confidence            99999998765  23447788999999999999999999999999987665  899999998763

...

>PRK08324 short chain dehydrogenase; Validated

Probab=99.86  E-value=9e-21  Score=171.06  Aligned_cols=143  Identities=27%  Similarity=0.388  Sum_probs=123.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+.||+++||||++|||++++++|+++|++|++++|+.+++++..+++...   ..+..+.+|++++.+..+.++++.+.
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999998888777766542   46788899999887777767777666


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCC-CEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK-GAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~-g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.++|++.+++|+.|++.+++.+.|.|++++. |+||++||.++.
T Consensus       496 ~g--~iDvvI~~AG~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~  562 (681)
T PRK08324        496 FG--GVDIVVSNAGIAISGP--IEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAV  562 (681)
T ss_pred             cC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc
Confidence            66  6999999999876544  678899999999999999999999999999988774 899999998764

>PRK12742 oxidoreductase; Provisional

Probab=99.86  E-value=1.5e-20  Score=148.64  Aligned_cols=131  Identities=20%  Similarity=0.292  Sum_probs=101.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++|+++||||++|||+++|++|+++|++|+++++ ++++.++..++.       ....+.+|++++.+    +.+..+.
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-------~~~~~~~D~~~~~~----~~~~~~~   72 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-------GATAVQTDSADRDA----VIDVVRK   72 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-------CCeEEecCCCCHHH----HHHHHHH
Confidence            45899999999999999999999999999988876 445554443322       23456778776532    3333334


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .+  ++|++|||||.....+  ..+.+.++|++++++|+.|++.+++.++|+|.+  .|+||++||.++
T Consensus        73 ~~--~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~  135 (237)
T PRK12742         73 SG--ALDILVVNAGIAVFGD--ALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNG  135 (237)
T ss_pred             hC--CCcEEEECCCCCCCCC--cccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEecccc
Confidence            44  6999999999865433  567889999999999999999999999999853  489999999876

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.86  E-value=6.9e-21  Score=151.40  Aligned_cols=137  Identities=27%  Similarity=0.335  Sum_probs=110.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH-HHHHhcC-
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA-IEMAIDG-  142 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~~~-  142 (210)
                      +++||||++|||++++++|+++|++|++++|+.++.  .    ... .+.++.++++|+++.++.++.+++ +.+.++. 
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   75 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG   75 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence            689999999999999999999999999999986531  1    111 245688899999988766665554 4444432 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++|++|||||...+. .++.+.+.+++++.+++|+.|++.+++.++|.|.+++.|+||++||.++.
T Consensus        76 ~~~~~~v~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  141 (243)
T PRK07023         76 ASRVLLINNAGTVEPI-GPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAAR  141 (243)
T ss_pred             CCceEEEEcCcccCCC-CccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhc
Confidence            3699999999986542 23567899999999999999999999999999988888999999998754

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.4e-20  Score=149.72  Aligned_cols=141  Identities=22%  Similarity=0.337  Sum_probs=117.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++|+++||||++|||++++++|+++|++|++++|+++..++..++..    +.++..+.+|++++.+..+.++++.+.+
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVERF   84 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            458999999999999999999999999999999999877766554442    2256888999999877777777777766


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCC-CEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK-GAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~-g~iv~isS~ag  208 (210)
                      +  ++|++|||||..... ....+.+.+++++++++|+.+++.+++.+++.|.+.+. ++++++||.++
T Consensus        85 ~--~~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~  150 (264)
T PRK12829         85 G--GLDVLVNNAGIAGPT-GGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAG  150 (264)
T ss_pred             C--CCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccc
Confidence            6  699999999987332 23567889999999999999999999999998887766 78999998765

>PRK08264 short chain dehydrogenase; Validated

Probab=99.86  E-value=2.8e-20  Score=147.33  Aligned_cols=134  Identities=26%  Similarity=0.345  Sum_probs=110.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +..+++++||||++|||+++|++|+++|+ +|++++|+.+++++       .  +.++.++.+|++++++    ++++.+
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~--~~~~~~~~~D~~~~~~----~~~~~~   69 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------L--GPRVVPLQLDVTDPAS----VAAAAE   69 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------c--CCceEEEEecCCCHHH----HHHHHH
Confidence            35689999999999999999999999999 99999999876543       1  4567888899987743    344444


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ..+  ++|++|||||.... ...+.+.+.+++++.+++|+.+++.+++++.|.|++++.+++|++||..+.
T Consensus        70 ~~~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~  137 (238)
T PRK08264         70 AAS--DVTILVNNAGIFRT-GSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSW  137 (238)
T ss_pred             hcC--CCCEEEECCCcCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc
Confidence            444  69999999998332 123668899999999999999999999999999988888999999997653

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.7e-20  Score=148.05  Aligned_cols=128  Identities=32%  Similarity=0.446  Sum_probs=107.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+|+++||||++|||++++++|+++|++|++++|+.++      .    . .  ..++.+|++++.+.++.++++.+.. 
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~----~-~--~~~~~~D~~~~~~~~~~~~~~~~~~-   67 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------D----F-P--GELFACDLADIEQTAATLAQINEIH-   67 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------c----c-C--ceEEEeeCCCHHHHHHHHHHHHHhC-
Confidence            47899999999999999999999999999999998653      0    0 1  1467889998876666666665543 


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                        ++|++|||||.....+  +.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||.+
T Consensus        68 --~~d~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~  129 (234)
T PRK07577         68 --PVDAIVNNVGIALPQP--LGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA  129 (234)
T ss_pred             --CCcEEEECCCCCCCCC--hHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc
Confidence              5899999999876544  6678899999999999999999999999999988889999999975

>PRK08017 oxidoreductase; Provisional

Probab=99.85  E-value=2.6e-20  Score=148.95  Aligned_cols=136  Identities=20%  Similarity=0.273  Sum_probs=111.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .|+++||||++|||++++++|+++|++|++++|+.++++...    +.    .+..+.+|++++.+..+.++.+.+...+
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~----~~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL----GFTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC----CCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            368999999999999999999999999999999987765432    11    3567889998876655555555543322


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|.+|||||.....+  +.+.+.+++++.+++|+.|++++++.++|.|++++.++||++||.++.
T Consensus        74 -~~~~ii~~ag~~~~~~--~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~  137 (256)
T PRK08017         74 -RLYGLFNNAGFGVYGP--LSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGL  137 (256)
T ss_pred             -CCeEEEECCCCCCccc--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccc
Confidence             6899999999765433  668899999999999999999999999999998888999999998664

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=4.1e-20  Score=146.56  Aligned_cols=142  Identities=29%  Similarity=0.501  Sum_probs=116.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~-~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.|+++||||+++||++++++|+++|++|++..|+. +..++..+++...  +.++.++.+|+++..+..+.++++.+..
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999988866654 4445555555543  4567888999998876776666666655


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.+++++.+++|+.+++.+++.++|++.+++.+++|++||..+.
T Consensus        83 ~--~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~  147 (249)
T PRK12825         83 G--RIDILVNNAGIFEDKP--LADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGL  147 (249)
T ss_pred             C--CCCEEEECCccCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccC
Confidence            5  6999999999765533  567789999999999999999999999999988888999999998753

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=2.2e-20  Score=161.24  Aligned_cols=138  Identities=28%  Similarity=0.411  Sum_probs=112.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh--hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH--NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +.||+++||||++|||+++|++|+++|++|++++|..  +++++..+++       ....+.+|++++.+.++.++.+.+
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-------~~~~~~~Dv~~~~~~~~~~~~~~~  280 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-------GGTALALDITAPDAPARIAEHLAE  280 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-------CCeEEEEeCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999853  3333333222       224678899988777666666666


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||......  +.+.+.++|++++++|+.|++++.+.++|.+..++.|+||++||.++.
T Consensus       281 ~~g--~id~vi~~AG~~~~~~--~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~  347 (450)
T PRK08261        281 RHG--GLDIVVHNAGITRDKT--LANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGI  347 (450)
T ss_pred             hCC--CCCEEEECCCcCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhc
Confidence            655  6999999999876543  678899999999999999999999999997666677999999998764

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.85  E-value=4.9e-20  Score=156.01  Aligned_cols=126  Identities=21%  Similarity=0.320  Sum_probs=98.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++||+++||||++|||++++++|+++|++|++++|+++++++.   ....  ......+.+|+++++       .+.+.+
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~--~~~v~~v~~Dvsd~~-------~v~~~l  243 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGE--DLPVKTLHWQVGQEA-------ALAELL  243 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---Hhhc--CCCeEEEEeeCCCHH-------HHHHHh
Confidence            4689999999999999999999999999999999988765432   2221  234567788887662       334445


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCC----CEEEEecc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK----GAIVNIGS  205 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~----g~iv~isS  205 (210)
                      +  ++|++|||||....     .+.+.|++++++++|+.|+++++++++|.|++++.    +.+|++||
T Consensus       244 ~--~IDiLInnAGi~~~-----~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss  305 (406)
T PRK07424        244 E--KVDILIINHGINVH-----GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE  305 (406)
T ss_pred             C--CCCEEEECCCcCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc
Confidence            4  69999999997532     36788999999999999999999999999987642    45677765

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.85  E-value=6.6e-20  Score=145.59  Aligned_cols=136  Identities=29%  Similarity=0.428  Sum_probs=108.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++.+++++||||++|||+++++.|+++|++|++++|+++++++..++.       ....+.+|+++..    .++++.+
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~----~v~~~~~   73 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDA----AIRAALA   73 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHH----HHHHHHH
Confidence            3466899999999999999999999999999999999987766544332       2346778887663    3344444


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      ..+  ++|++|||||.....+  ..+.+.+++++.+++|+.+++.+++++++.+.+++ .|+||++||.+++
T Consensus        74 ~~~--~~d~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~  141 (245)
T PRK07060         74 AAG--AFDGLVNCAGIASLES--ALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAAL  141 (245)
T ss_pred             HhC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHc
Confidence            444  6999999999865433  55788999999999999999999999999987665 4899999998653

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.8e-20  Score=146.37  Aligned_cols=134  Identities=19%  Similarity=0.255  Sum_probs=105.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||++|||++++++|+++|++|++++|++++.++..    +   ..+..+..+|++++++.++    +.+.+.+.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~---~~~~~~~~~D~~d~~~~~~----~~~~~~~~   70 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ----A---LPGVHIEKLDMNDPASLDQ----LLQRLQGQ   70 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH----h---ccccceEEcCCCCHHHHHH----HHHHhhcC
Confidence            68999999999999999999999999999999987655432    1   1245667788887644444    43433333


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|++|||||.......++.+.+.+++++.+++|+.+++.+++.++|+|.+. .++++++||..|.
T Consensus        71 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~  135 (225)
T PRK08177         71 RFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGS  135 (225)
T ss_pred             CCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccc
Confidence            7999999999875433346688999999999999999999999999988643 5899999997764

>PRK09135 pteridine reductase; Provisional

Probab=99.85  E-value=5.6e-20  Score=146.12  Aligned_cols=141  Identities=24%  Similarity=0.337  Sum_probs=114.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~-~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+++++||||++|||++++++|+++|++|++++|+ ++..++..+++.... ...+.++.+|++++.+....++.+.+.+
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999986 445566555555432 3457788899999877777677776666


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +  ++|++|||||.....+  +.+.+.+++++++++|+.|++++.+++.|.+.++ .|++++++|..+
T Consensus        84 ~--~~d~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~  146 (249)
T PRK09135         84 G--RLDALVNNASSFYPTP--LGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHA  146 (249)
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhh
Confidence            5  6999999999865533  5567889999999999999999999999988665 488888887543

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.85  E-value=6.1e-20  Score=145.09  Aligned_cols=138  Identities=32%  Similarity=0.508  Sum_probs=115.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~-~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      ++|||++++||.+++++|+++|++|++++|+. +.+++..++++..  +.++..+.+|++++.+.++.++.+.+.++  +
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~   76 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELG--P   76 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhC--C
Confidence            58999999999999999999999999999875 4555555566543  45688899999988777776777766665  6


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +|++|||||.....+  +.+.+.+++++.+++|+.+++.+++.+.|.+.+++.++++++||.++.
T Consensus        77 id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~  139 (239)
T TIGR01830        77 IDILVNNAGITRDNL--LMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGL  139 (239)
T ss_pred             CCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCcccc
Confidence            999999999865433  557788999999999999999999999999988778899999998654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.85  E-value=9e-20  Score=143.21  Aligned_cols=133  Identities=20%  Similarity=0.326  Sum_probs=104.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||++|||++++++|+++|++|++++|+.++.++..    ..    ...++.+|+++....++    +.+...+.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~----~~~~~~~D~~~~~~v~~----~~~~~~~~   69 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL----GAEALALDVADPASVAG----LAWKLDGE   69 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc----cceEEEecCCCHHHHHH----HHHHhcCC
Confidence            57999999999999999999999999999999987665432    21    24578899988744433    33333333


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|++|||||..........+.+.++|++.+++|+.+++.++++++|+|.+ +.|+++++||.++.
T Consensus        70 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iv~isS~~~~  134 (222)
T PRK06953         70 ALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA-AGGVLAVLSSRMGS  134 (222)
T ss_pred             CCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc-cCCeEEEEcCcccc
Confidence            799999999986433333557789999999999999999999999998855 46899999998763

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.84  E-value=2.2e-21  Score=142.54  Aligned_cols=142  Identities=25%  Similarity=0.376  Sum_probs=120.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+|-+.+||||.||+|++.|++|+++|+.|++.|-...+.++..+++     +.++.+.++|++++.+..........++
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~kf   81 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKAKF   81 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence            35889999999999999999999999999999999998888888887     7789999999999987777777777788


Q ss_pred             cCCCccEEEEcCCCCCCCccc----ccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC------CCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMF----FHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK------KGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~------~g~iv~isS~ag~  209 (210)
                      +  ++|.+|||||+.......    -..-+.|++++++++|++|+|+.++.-.-.|-++.      +|.|||+.|++++
T Consensus        82 g--rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaaf  158 (260)
T KOG1199|consen   82 G--RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAF  158 (260)
T ss_pred             c--ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeee
Confidence            7  799999999986532111    12457899999999999999999999988885542      4789999999874

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.1e-19  Score=143.25  Aligned_cols=128  Identities=16%  Similarity=0.252  Sum_probs=103.9

Q ss_pred             EEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCcc
Q 045749           67 LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVG  146 (210)
Q Consensus        67 lITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~id  146 (210)
                      +||||++|||++++++|+++|++|++++|+++++++..+++++   +.++.++.+|++++.+.    +++.+..+  ++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~----~~~~~~~~--~id   71 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAV----DAFFAEAG--PFD   71 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHH----HHHHHhcC--CCC
Confidence            5999999999999999999999999999998887777666642   45677888999887443    34444444  699


Q ss_pred             EEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          147 VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       147 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|||||.....+  +.+.+.+++++++++|+.+++++++  .+.|  ++.|+||++||.+++
T Consensus        72 ~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~--~~~g~iv~~ss~~~~  128 (230)
T PRK07041         72 HVVITAADTPGGP--VRALPLAAAQAAMDSKFWGAYRVAR--AARI--APGGSLTFVSGFAAV  128 (230)
T ss_pred             EEEECCCCCCCCC--hhhCCHHHHHHHHHHHHHHHHHHHh--hhhh--cCCeEEEEECchhhc
Confidence            9999999876543  6678999999999999999999999  4444  346899999998764

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.84  E-value=8.6e-20  Score=144.29  Aligned_cols=129  Identities=19%  Similarity=0.264  Sum_probs=101.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           64 SWALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ++++||||++|||+++|++|+++|  ..|+..+|+...      +    ....++.++++|++++.+    ++++.+.++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~------~----~~~~~~~~~~~Dls~~~~----~~~~~~~~~   66 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP------D----FQHDNVQWHALDVTDEAE----IKQLSEQFT   66 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc------c----cccCceEEEEecCCCHHH----HHHHHHhcC
Confidence            469999999999999999999985  566666765432      1    113567888999988743    334555555


Q ss_pred             CCCccEEEEcCCCCCCC----cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          142 GLEVGVLINNVGITYPK----AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                        ++|++|||||.....    ...+.+.+.++|++.+++|+.+++.+++.++|.|++++.++++++||..|
T Consensus        67 --~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~  135 (235)
T PRK09009         67 --QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG  135 (235)
T ss_pred             --CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc
Confidence              699999999987532    12356788899999999999999999999999998877789999998654

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=2e-19  Score=142.35  Aligned_cols=137  Identities=20%  Similarity=0.227  Sum_probs=112.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++|+++||||++|||.+++++|+++|++|++++|+++++++..+++...   .++..+++|++++.+.++.++++.+.+
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY---GNIHYVVGDVSSTESARNVIEKAAKVL   79 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999998887766666442   357788999999877777677666655


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +  ++|.+|+|+|.....+  ..  +.+++++++++|+.+++++.+.++|.|.+  .|++|++||..+
T Consensus        80 ~--~id~ii~~ag~~~~~~--~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~  139 (238)
T PRK05786         80 N--AIDGLVVTVGGYVEDT--VE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSG  139 (238)
T ss_pred             C--CCCEEEEcCCCcCCCc--hH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchh
Confidence            5  6899999998754322  22  34889999999999999999999998743  489999999865

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.83  E-value=1e-19  Score=141.12  Aligned_cols=144  Identities=23%  Similarity=0.257  Sum_probs=124.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC-----CeEEEEecChhHHHHHHHHHHhhCC--CceeEEEEEecccCccchhhHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHG-----LNLILVSRNHNKLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G-----~~Vi~~~r~~~~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      .|+++|||++||+|.++|++|.+..     .++++++|+.++.|++...+++.+|  ..++.++.+|+++..+..+..++
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            5899999999999999999998754     3588999999999999999999988  57889999999999999999999


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCccc-------------------------ccCCCHHHHHHHhHhhhhHHHHHHHHHHH
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMF-------------------------FHEVDEKEWMDIVRVNLEGTTRVTKAVLT  190 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~-------------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~l~  190 (210)
                      +.+++.  ++|.++.|||.+......                         ....+.|+...+|+.|++|||++.+.+.|
T Consensus        83 i~~rf~--~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p  160 (341)
T KOG1478|consen   83 IKQRFQ--RLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP  160 (341)
T ss_pred             HHHHhh--hccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence            999988  699999999986432110                         12347788899999999999999999999


Q ss_pred             HhHhCCCCEEEEeccccc
Q 045749          191 GMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       191 ~m~~~~~g~iv~isS~ag  208 (210)
                      .+..++...+|.+||..+
T Consensus       161 ll~~~~~~~lvwtSS~~a  178 (341)
T KOG1478|consen  161 LLCHSDNPQLVWTSSRMA  178 (341)
T ss_pred             HhhcCCCCeEEEEeeccc
Confidence            998888779999999765

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.6e-19  Score=139.52  Aligned_cols=115  Identities=17%  Similarity=0.208  Sum_probs=95.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||++|||++++++|+++ ++|++++|+.+                   .+++|++++++    ++++.+..+  +
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~----~~~~~~~~~--~   55 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPAS----IRALFEKVG--K   55 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHH----HHHHHHhcC--C
Confidence            6899999999999999999999 99999999753                   24678887743    334444444  6


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +|++|||||.....+  +.+.+.++|++.+++|+.+++++++.++|+|.+  .|+|+++||.++.
T Consensus        56 id~lv~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~  116 (199)
T PRK07578         56 VDAVVSAAGKVHFAP--LAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSD  116 (199)
T ss_pred             CCEEEECCCCCCCCc--hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccC
Confidence            999999999865433  678899999999999999999999999999864  4899999998764

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.83  E-value=5.9e-20  Score=146.27  Aligned_cols=134  Identities=22%  Similarity=0.261  Sum_probs=106.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh-HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN-KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~-~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.+|+++||||++|||++++++|+++|++|++++|+.+ ..++..++++..  +.++..+.+|++++++....++++.+.
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTAREE   81 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            45899999999999999999999999999999999753 456666666553  456788899999887777666666666


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++  ++|++|||||.....     +.   +++..+++|+.|++++++.+.|+|.+  .|++|++||..+
T Consensus        82 ~~--~~d~vi~~ag~~~~~-----~~---~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~  138 (248)
T PRK07806         82 FG--GLDALVLNASGGMES-----GM---DEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQA  138 (248)
T ss_pred             CC--CCcEEEECCCCCCCC-----CC---CcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchh
Confidence            55  699999999864221     11   24568999999999999999998843  479999999643

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.79  E-value=1.5e-18  Score=130.29  Aligned_cols=136  Identities=20%  Similarity=0.289  Sum_probs=105.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHH---HHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKIS---NEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~---~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      |+++||||++|||++++++|+++|+ .|++++|+++..++..   +++++.  +.++..+.+|++++...++.++.+.+.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999997 5888888765543322   344332  457778889998876666655666555


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|.+|||||.....+  ..+.+.+++++++++|+.+++.+.+.+.    +.+.++++++||..+.
T Consensus        79 ~~--~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~ii~~ss~~~~  140 (180)
T smart00822       79 LG--PLRGVIHAAGVLDDGL--LANLTPERFAAVLAPKVDGAWNLHELTR----DLPLDFFVLFSSVAGV  140 (180)
T ss_pred             cC--CeeEEEEccccCCccc--cccCCHHHHHHhhchHhHHHHHHHHHhc----cCCcceEEEEccHHHh
Confidence            54  6999999999865433  5688999999999999999999999873    3456899999998653

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.79  E-value=2.1e-18  Score=170.43  Aligned_cols=137  Identities=17%  Similarity=0.248  Sum_probs=110.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCh--------------h----------------------------
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQH-GLNLILVSRNH--------------N----------------------------   98 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~--------------~----------------------------   98 (210)
                      .|++++||||++|||+++|++|+++ |++|++++|+.              .                            
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            4799999999999999999999998 69999999982              0                            


Q ss_pred             -----HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHH
Q 045749           99 -----KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDI  173 (210)
Q Consensus        99 -----~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~  173 (210)
                           +.++..+++++.  +.++.++.+|++|.....+.++++.+. +  ++|++|||||+...+.  +.+.+.++|+++
T Consensus      2076 ~~~~~ei~~~la~l~~~--G~~v~y~~~DVtD~~av~~av~~v~~~-g--~IDgVVhnAGv~~~~~--i~~~t~e~f~~v 2148 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAA--GASAEYASADVTNSVSVAATVQPLNKT-L--QITGIIHGAGVLADKH--IQDKTLEEFNAV 2148 (2582)
T ss_pred             cchhHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHh-C--CCcEEEECCccCCCCC--cccCCHHHHHHH
Confidence                 111112223222  457888999999998888777777655 3  6999999999876644  789999999999


Q ss_pred             hHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          174 VRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       174 ~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      |++|+.|++++.+++.+.+    .++||++||++|.
T Consensus      2149 ~~~nv~G~~~Ll~al~~~~----~~~IV~~SSvag~ 2180 (2582)
T TIGR02813      2149 YGTKVDGLLSLLAALNAEN----IKLLALFSSAAGF 2180 (2582)
T ss_pred             HHHHHHHHHHHHHHHHHhC----CCeEEEEechhhc
Confidence            9999999999999876643    3579999999885

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.78  E-value=8.5e-18  Score=131.88  Aligned_cols=131  Identities=29%  Similarity=0.437  Sum_probs=105.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .|+++||||+++||++++++|+++ ++|++++|+.++.++..++.      ..+.++.+|+++..    .++++.+..+ 
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~----~~~~~~~~~~-   70 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL------PGATPFPVDLTDPE----AIAAAVEQLG-   70 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh------ccceEEecCCCCHH----HHHHHHHhcC-
Confidence            578999999999999999999999 99999999987765543322      23567788888763    3334444443 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|++||+||.....+  ..+.+.+++++++++|+.+++.+++.+++.|+++ .+++|++||.++.
T Consensus        71 -~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~  133 (227)
T PRK08219         71 -RLDVLVHNAGVADLGP--VAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGL  133 (227)
T ss_pred             -CCCEEEECCCcCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhc
Confidence             6999999999865433  5678899999999999999999999999988776 4899999998764

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.73  E-value=6.5e-17  Score=133.91  Aligned_cols=129  Identities=16%  Similarity=0.198  Sum_probs=96.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .||+++||||+|+||++++++|+++|++|++++|+.++.++..+.........++.++.+|++++..       +.+.+.
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-------~~~~~~   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGS-------FELAID   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchH-------HHHHHc
Confidence            3789999999999999999999999999999999876654432222211112467788889987732       222233


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                        ++|++|||||....      +.+.+++.+.+++|+.|++++++++.+.+   +.++||++||.++
T Consensus        77 --~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~  132 (325)
T PLN02989         77 --GCETVFHTASPVAI------TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAA  132 (325)
T ss_pred             --CCCEEEEeCCCCCC------CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhh
Confidence              48999999996422      22445678899999999999999987743   3479999999865

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.73  E-value=4.8e-17  Score=124.14  Aligned_cols=136  Identities=19%  Similarity=0.319  Sum_probs=99.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCh---hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL-NLILVSRNH---NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~---~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++||||.+|||..+++.|+++|+ ++++++|+.   .+.++..+++++.  +.++.+.++|++++.+..+.++++.+..
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~~~   79 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQRF   79 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHhcc
Confidence            689999999999999999999986 699999993   2455667777775  6799999999998866666555555555


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccccC
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV  210 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~~  210 (210)
                      +  ++|.+||+||.....+  +.+.++++++.+++..+.|..++.+.+.+    .+...+|+.||+++++
T Consensus        80 ~--~i~gVih~ag~~~~~~--~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~  141 (181)
T PF08659_consen   80 G--PIDGVIHAAGVLADAP--IQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLL  141 (181)
T ss_dssp             S---EEEEEE-------B---GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHT
T ss_pred             C--Ccceeeeeeeeecccc--cccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhc
Confidence            3  7999999999976644  88999999999999999999999888543    5568899999998753

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.70  E-value=5.3e-16  Score=135.10  Aligned_cols=127  Identities=19%  Similarity=0.257  Sum_probs=98.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh-----C--CCceeEEEEEecccCccchhhH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAE-----N--PNTQINIVEYDFSCDVVSAGNI  133 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~-----~--~~~~~~~~~~D~~~~~~~~~~~  133 (210)
                      ..||+++||||+||||++++++|+++|++|++++|+.++++++.+++.+.     +  ...++.++.+|+++.+      
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~e------  151 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPD------  151 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHH------
Confidence            46899999999999999999999999999999999999888776665431     1  1235788889997652      


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          134 KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       134 ~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       .+.+.++  ++|++|||||....        ...++...+++|+.|..++++++.+    .+.++||++||.++
T Consensus       152 -sI~~aLg--giDiVVn~AG~~~~--------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga  211 (576)
T PLN03209        152 -QIGPALG--NASVVICCIGASEK--------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGT  211 (576)
T ss_pred             -HHHHHhc--CCCEEEEccccccc--------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchh
Confidence             3344555  58999999996421        1124678899999999999988643    46689999999865

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.66  E-value=4.3e-17  Score=124.85  Aligned_cols=143  Identities=17%  Similarity=0.160  Sum_probs=93.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+|++++||+|+|||..++..+..++-.....++++...+  .+.++..++ ........|.+++....+..+...+..+
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            4789999999999999988888776644333332222211  111111111 1112222333333222232333333333


Q ss_pred             CCCccEEEEcCCCCCCCccc-ccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMF-FHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                        +.|++|||||...+...- .+..+.++|++.++.|+++++.+.+.++|.++++. .|.+||+||.+++
T Consensus        82 --kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav  149 (253)
T KOG1204|consen   82 --KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV  149 (253)
T ss_pred             --ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh
Confidence              789999999998764322 23678899999999999999999999999998885 7999999998864

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.65  E-value=4.9e-15  Score=113.78  Aligned_cols=140  Identities=18%  Similarity=0.194  Sum_probs=118.0

Q ss_pred             ccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           60 KSYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        60 ~~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+.||+.+|+|=+  ++|+..+|+.+.++|+++..+..++ ++++..+++.+..  ....+++||++++++.++.++++.
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~--~s~~v~~cDV~~d~~i~~~f~~i~   79 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEEL--GSDLVLPCDVTNDESIDALFATIK   79 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhc--cCCeEEecCCCCHHHHHHHHHHHH
Confidence            4579999999954  7999999999999999999999887 6777777765542  335778999999999999999999


Q ss_pred             HHhcCCCccEEEEcCCCCCC--CcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          138 MAIDGLEVGVLINNVGITYP--KAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      ++++  ++|++||+-|....  -.+.+.|++.|.|...+++..++...+.|++.|.|.  ++|+|+.++=.
T Consensus        80 ~~~g--~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~--~ggSiltLtYl  146 (259)
T COG0623          80 KKWG--KLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMN--NGGSILTLTYL  146 (259)
T ss_pred             HhhC--cccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC--CCCcEEEEEec
Confidence            9999  69999999998752  223467899999999999999999999999999883  46889887643

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.65  E-value=2.9e-15  Score=125.35  Aligned_cols=127  Identities=15%  Similarity=0.129  Sum_probs=92.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +||+++||||+++||.+++++|+++|++|++++|+.....+..+.+..   ..++..+.+|+++..    .++++.+.  
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~----~~~~~~~~--   73 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDAA----KLRKAIAE--   73 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCHH----HHHHHHhh--
Confidence            478999999999999999999999999999999987654433333321   234666778887662    23333332  


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                       .++|++||+||....      +.+.+++...+++|+.++.++++++.+ +  ...+++|++||..
T Consensus        74 -~~~d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~ll~a~~~-~--~~~~~iv~~SS~~  129 (349)
T TIGR02622        74 -FKPEIVFHLAAQPLV------RKSYADPLETFETNVMGTVNLLEAIRA-I--GSVKAVVNVTSDK  129 (349)
T ss_pred             -cCCCEEEECCccccc------ccchhCHHHHHHHhHHHHHHHHHHHHh-c--CCCCEEEEEechh
Confidence             258999999995322      335566778999999999999998643 1  2246999999964

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.65  E-value=4.7e-15  Score=123.02  Aligned_cols=124  Identities=21%  Similarity=0.313  Sum_probs=91.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +||+++||||+++||++++++|+++|  ++|++.+|+..+.++..+++    +..++.++.+|+++..       .+.+.
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~-------~l~~~   71 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKE-------RLTRA   71 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHH-------HHHHH
Confidence            48999999999999999999999986  78999999876544333322    1346778889988762       23333


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +.  ++|++|||||.... +  ..+.++   ++.+++|+.|+.++++++.+    .+.++||++||..+
T Consensus        72 ~~--~iD~Vih~Ag~~~~-~--~~~~~~---~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~  128 (324)
T TIGR03589        72 LR--GVDYVVHAAALKQV-P--AAEYNP---FECIRTNINGAQNVIDAAID----NGVKRVVALSTDKA  128 (324)
T ss_pred             Hh--cCCEEEECcccCCC-c--hhhcCH---HHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCC
Confidence            33  48999999997532 1  223333   46899999999999999764    45579999998653

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.62  E-value=4.7e-15  Score=123.63  Aligned_cols=133  Identities=17%  Similarity=0.081  Sum_probs=91.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH-HHHHHHHh-h-CCCceeEEEEEecccCccchhhHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE-KISNEIQA-E-NPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~-~~~~~l~~-~-~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ..+|+++||||+++||.+++++|+++|++|++++|+.+... ...+++.. . ..+.++.++.+|+++...    ++++.
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~----~~~~~   79 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASS----LRRWL   79 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHH----HHHHH
Confidence            45899999999999999999999999999999998754311 11112211 0 113457788889887632    22332


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCC-CEEEEeccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK-GAIVNIGSG  206 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~-g~iv~isS~  206 (210)
                      +..   ++|++|||||.....      ...++.+..+++|+.|+.++++++.+.+.+++. -++|++||.
T Consensus        80 ~~~---~~d~Vih~A~~~~~~------~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~  140 (340)
T PLN02653         80 DDI---KPDEVYNLAAQSHVA------VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSS  140 (340)
T ss_pred             HHc---CCCEEEECCcccchh------hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccH
Confidence            222   489999999975432      123445678899999999999999887644311 278888875

>PLN02583 cinnamoyl-CoA reductase

Probab=99.60  E-value=2.5e-14  Score=117.30  Aligned_cols=126  Identities=14%  Similarity=0.102  Sum_probs=89.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh--HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN--KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~--~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+|+++||||+|+||++++++|+++|++|+++.|+.+  +.++...++...  +.++.++.+|+++..       .+.+.
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~-------~~~~~   75 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYH-------SILDA   75 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHH-------HHHHH
Confidence            4789999999999999999999999999999998633  222222332211  345777888988763       23333


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.  ..|.++|.++...       +.+ +++++++++|+.|+.++++++.+.+   +.++||++||.+++
T Consensus        76 l~--~~d~v~~~~~~~~-------~~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~  132 (297)
T PLN02583         76 LK--GCSGLFCCFDPPS-------DYP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAV  132 (297)
T ss_pred             Hc--CCCEEEEeCccCC-------ccc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHhe
Confidence            43  3678887665321       111 2467899999999999999987653   34799999998653

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.59  E-value=3e-14  Score=117.91  Aligned_cols=128  Identities=16%  Similarity=0.206  Sum_probs=90.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .||+++||||+|+||.+++++|+++|++|+++.|+.++.++..+.........++.++.+|++++..       +.+.+.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-------~~~~~~   76 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESS-------FEQAIE   76 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcch-------HHHHHh
Confidence            4789999999999999999999999999999999876554432222211112457788889987732       222233


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                        .+|++||+||.....     .  .+..++.+++|+.|+.++++++...   .+.++||++||.++
T Consensus        77 --~~d~vih~A~~~~~~-----~--~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~  131 (322)
T PLN02986         77 --GCDAVFHTASPVFFT-----V--KDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAA  131 (322)
T ss_pred             --CCCEEEEeCCCcCCC-----C--CCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhh
Confidence              388999999964221     1  1223568999999999999886431   23469999999864

>PLN02240 UDP-glucose 4-epimerase

Probab=99.58  E-value=3.8e-14  Score=118.50  Aligned_cols=131  Identities=15%  Similarity=0.160  Sum_probs=90.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhC--CCceeEEEEEecccCccchhhHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN--PNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ++++|+++||||++++|.+++++|+++|++|++++|......+..+++....  ...++..+.+|++++.    .++.+.
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----~l~~~~   77 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKE----ALEKVF   77 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHH----HHHHHH
Confidence            4568999999999999999999999999999999875432222222222211  1235677888887663    223332


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +.   .++|++||+||.....      .+.+++.+.+++|+.++.++.+++    .+.+.+++|++||..
T Consensus        78 ~~---~~~d~vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~  134 (352)
T PLN02240         78 AS---TRFDAVIHFAGLKAVG------ESVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSAT  134 (352)
T ss_pred             Hh---CCCCEEEEccccCCcc------ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHH
Confidence            22   2589999999965321      133456789999999999998864    445557999999963

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.58  E-value=6.4e-14  Score=117.42  Aligned_cols=132  Identities=17%  Similarity=0.162  Sum_probs=94.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ..+++++||||+|.||.+++++|+++|++|++++|+.++.+...+++..   ..++.++.+|++++.       .+.+.+
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~-------~~~~~~   77 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEG-------SFDEAV   77 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHH-------HHHHHH
Confidence            4578999999999999999999999999999999987665554443321   346778888887762       233333


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHH--HHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEW--MDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .  ++|++||+|+...... .....+++++  ..++++|+.|+.++++++.+..   +.+++|++||.+.
T Consensus        78 ~--~~d~Vih~A~~~~~~~-~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~v  141 (353)
T PLN02896         78 K--GCDGVFHVAASMEFDV-SSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSIST  141 (353)
T ss_pred             c--CCCEEEECCccccCCc-cccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhh
Confidence            3  4799999999764321 0112233333  4578889999999999876531   3468999999754

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.55  E-value=1.4e-13  Score=118.72  Aligned_cols=136  Identities=15%  Similarity=0.104  Sum_probs=92.4

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh---H----H---------HHHHHHHHhhCCCceeEEEEE
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN---K----L---------EKISNEIQAENPNTQINIVEY  121 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~---~----l---------~~~~~~l~~~~~~~~~~~~~~  121 (210)
                      .-+.++++++||||+|+||++++++|+++|++|++++|...   +    .         .+..+.+... .+.++.++.+
T Consensus        42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v~~  120 (442)
T PLN02572         42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-SGKEIELYVG  120 (442)
T ss_pred             CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-hCCcceEEEC
Confidence            34467899999999999999999999999999999875311   0    0         0011111111 1335778888


Q ss_pred             ecccCccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEE
Q 045749          122 DFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIV  201 (210)
Q Consensus       122 D~~~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv  201 (210)
                      |+++..    .++++.+.   .++|++||+|+.... +  ..+.++++++..+++|+.|+.++++++...   ..+.++|
T Consensus       121 Dl~d~~----~v~~~l~~---~~~D~ViHlAa~~~~-~--~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~---gv~~~~V  187 (442)
T PLN02572        121 DICDFE----FLSEAFKS---FEPDAVVHFGEQRSA-P--YSMIDRSRAVFTQHNNVIGTLNVLFAIKEF---APDCHLV  187 (442)
T ss_pred             CCCCHH----HHHHHHHh---CCCCEEEECCCcccC-h--hhhcChhhHHHHHHHHHHHHHHHHHHHHHh---CCCccEE
Confidence            988662    23333322   258999999976432 1  334556677888999999999999987542   1124899


Q ss_pred             Eecccc
Q 045749          202 NIGSGA  207 (210)
Q Consensus       202 ~isS~a  207 (210)
                      ++||.+
T Consensus       188 ~~SS~~  193 (442)
T PLN02572        188 KLGTMG  193 (442)
T ss_pred             EEecce
Confidence            999975

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.54  E-value=1.5e-13  Score=113.49  Aligned_cols=127  Identities=17%  Similarity=0.207  Sum_probs=89.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh-CCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAE-NPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++|+++||||+|.||++++++|+++|++|++++|+.+...+.. .+... ....++.++..|+.++..       +.+.+
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~-------~~~~~   74 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDGAKERLHLFKANLLEEGS-------FDSVV   74 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccCCCCceEEEeccccCcch-------HHHHH
Confidence            3689999999999999999999999999999999865433222 22111 112467788899987732       22223


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .  ++|++||+|+.....     ..++  .++.+++|+.|+.++++++...   .+..++|++||.++
T Consensus        75 ~--~~d~Vih~A~~~~~~-----~~~~--~~~~~~~nv~gt~~ll~a~~~~---~~~~~~v~~SS~~~  130 (322)
T PLN02662         75 D--GCEGVFHTASPFYHD-----VTDP--QAELIDPAVKGTLNVLRSCAKV---PSVKRVVVTSSMAA  130 (322)
T ss_pred             c--CCCEEEEeCCcccCC-----CCCh--HHHHHHHHHHHHHHHHHHHHhC---CCCCEEEEccCHHH
Confidence            3  478999999864321     1112  2468999999999999987542   14469999999753

>PLN02650 dihydroflavonol-4-reductase

Probab=99.53  E-value=1.9e-13  Score=114.50  Aligned_cols=127  Identities=15%  Similarity=0.162  Sum_probs=90.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +.|+++||||+|.||.+++++|+++|++|++++|+.+..++............++.++..|+++.....       +.+.
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~-------~~~~   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFD-------DAIR   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHH-------HHHh
Confidence            367899999999999999999999999999999987665544332211111235778888988773222       2222


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                        .+|.+||+|+....     ..  .+..++.+++|+.|+.++++++.+..   ..++||++||..
T Consensus        77 --~~d~ViH~A~~~~~-----~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~  130 (351)
T PLN02650         77 --GCTGVFHVATPMDF-----ES--KDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAG  130 (351)
T ss_pred             --CCCEEEEeCCCCCC-----CC--CCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchh
Confidence              37899999985421     11  12235689999999999999976531   136899999974

>PLN02214 cinnamoyl-CoA reductase

Probab=99.53  E-value=2.2e-13  Score=113.87  Aligned_cols=122  Identities=19%  Similarity=0.176  Sum_probs=89.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH-HHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI-SNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~-~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .++|+++||||+|.||.+++++|+++|++|++++|+.++.... .+++..  ...++.++.+|+++..       .+.+.
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~-------~~~~~   78 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYE-------ALKAA   78 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChH-------HHHHH
Confidence            4578999999999999999999999999999999986643221 122221  1235777888887762       22223


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +.  .+|++||+|+...           +++++.+++|+.|+.++.+++.+    .+.+++|++||.++
T Consensus        79 ~~--~~d~Vih~A~~~~-----------~~~~~~~~~nv~gt~~ll~aa~~----~~v~r~V~~SS~~a  130 (342)
T PLN02214         79 ID--GCDGVFHTASPVT-----------DDPEQMVEPAVNGAKFVINAAAE----AKVKRVVITSSIGA  130 (342)
T ss_pred             Hh--cCCEEEEecCCCC-----------CCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEecccee
Confidence            33  4889999998531           12457899999999999998654    34569999999754

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.53  E-value=3e-13  Score=116.21  Aligned_cols=130  Identities=22%  Similarity=0.342  Sum_probs=106.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.||+++||||+|.||.++++++++.+.+ +++.+|++.++.....++++.++..+..++-+|+.|.       +.+...
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~-------~~~~~~  320 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDR-------DRVERA  320 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccH-------HHHHHH
Confidence            47999999999999999999999999865 8899999999999999999988878888988888776       344445


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +.+.++|+++|.|+.-+.   |..+..++   +.+.+|++|+.++.+++..    .+-.++|++|+=-
T Consensus       321 ~~~~kvd~VfHAAA~KHV---Pl~E~nP~---Eai~tNV~GT~nv~~aa~~----~~V~~~V~iSTDK  378 (588)
T COG1086         321 MEGHKVDIVFHAAALKHV---PLVEYNPE---EAIKTNVLGTENVAEAAIK----NGVKKFVLISTDK  378 (588)
T ss_pred             HhcCCCceEEEhhhhccC---cchhcCHH---HHHHHhhHhHHHHHHHHHH----hCCCEEEEEecCc
Confidence            555579999999987554   24444444   5899999999999999754    4567899998743

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.53  E-value=1.3e-13  Score=115.10  Aligned_cols=129  Identities=21%  Similarity=0.161  Sum_probs=87.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH-----HHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK-----LEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~-----l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      |+++||||+|+||.+++++|+++|++|++++|+.+.     ++...++... ..+..+.++.+|+++...    +.++  
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~----l~~~--   73 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHN-VNKARMKLHYGDLTDSSN----LRRI--   73 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhcccc-ccccceeEEEeccCCHHH----HHHH--
Confidence            589999999999999999999999999999997542     2221111110 012357788899987622    2233  


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                       +.+.++|++||+|+......      +.+.-+..+++|+.|+.++++++.+.-.+ +..++|++||.+
T Consensus        74 -~~~~~~d~ViH~Aa~~~~~~------~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~  134 (343)
T TIGR01472        74 -IDEIKPTEIYNLAAQSHVKV------SFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSE  134 (343)
T ss_pred             -HHhCCCCEEEECCcccccch------hhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHH
Confidence             22224899999999754321      22223567889999999999998763111 124799999964

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.53  E-value=2.8e-13  Score=112.80  Aligned_cols=127  Identities=18%  Similarity=0.206  Sum_probs=89.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ++++++||||+|.||.+++++|+++|++|++++|+.+....... +.......++.++.+|++++.       .+.+.+.
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~-------~~~~~~~   79 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDEE-------SFEAPIA   79 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCChH-------HHHHHHh
Confidence            47899999999999999999999999999988888654332221 111110125677888988762       2223333


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                        ++|++||+|+....     .  ..+..+..+++|+.|+.++++++.+.   .+.+++|++||.+.
T Consensus        80 --~~d~vih~A~~~~~-----~--~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~  134 (338)
T PLN00198         80 --GCDLVFHVATPVNF-----A--SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAA  134 (338)
T ss_pred             --cCCEEEEeCCCCcc-----C--CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeeccee
Confidence              47999999985311     1  12234567899999999999997552   23579999999764

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.52  E-value=2e-13  Score=114.38  Aligned_cols=129  Identities=11%  Similarity=0.099  Sum_probs=87.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEE-EEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLI-LVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi-~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      |+++||||+++||.+++++|.++|+.++ +.+|.+.. .+. ..+....+..++.++.+|+++..+    ++++.+.   
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~d~~~----~~~~~~~---   72 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVAQSERFAFEKVDICDRAE----LARVFTE---   72 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcccCCceEEEECCCcChHH----HHHHHhh---
Confidence            4799999999999999999999998855 45554321 111 111111113456777888887632    3333222   


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhH---h--CCCCEEEEecccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMM---R--RKKGAIVNIGSGA  207 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~---~--~~~g~iv~isS~a  207 (210)
                      .++|++||+||....      +.+.++++..+++|+.|+.++++++.+.|.   +  .+..++|++||.+
T Consensus        73 ~~~D~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~  136 (355)
T PRK10217         73 HQPDCVMHLAAESHV------DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE  136 (355)
T ss_pred             cCCCEEEECCcccCc------chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh
Confidence            258999999986432      224466788999999999999999987532   1  1235899999954

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.50  E-value=6e-13  Score=110.65  Aligned_cols=125  Identities=18%  Similarity=0.224  Sum_probs=85.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+++||++++++|+++|++|++++|...........+.+. ++.+..++.+|+++..    .++++.+   ..+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~----~~~~~~~---~~~   73 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEA----LLTEILH---DHA   73 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh-cCCCceEEEccCCCHH----HHHHHHh---cCC
Confidence            5899999999999999999999999999887543322222223222 1334566778887662    2233322   225


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +|++||+||......      ..+.....+++|+.++.++.+++    ++.+.+++|++||.+
T Consensus        74 ~d~vvh~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~  126 (338)
T PRK10675         74 IDTVIHFAGLKAVGE------SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSAT  126 (338)
T ss_pred             CCEEEECCccccccc------hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHH
Confidence            899999998753321      12334567899999999988764    455667899999964

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.46  E-value=4.4e-13  Score=108.16  Aligned_cols=124  Identities=23%  Similarity=0.388  Sum_probs=84.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEE----EEEecccCccchhhHHHHHHHh
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINI----VEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~----~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      |+||||+|.||.++++++++.+. ++++.||++.++-+...+++...++.++.+    +.+|+.|.       +.+.+.+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~-------~~l~~~~   73 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDK-------ERLNRIF   73 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHH-------HHHHHHT
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCH-------HHHHHHH
Confidence            69999999999999999999985 699999999999999999876655544433    23344443       3444444


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      ...++|+++|.|+.-+..   +.+..+   .+.+++|+.|+-++.+++..    .+-.++|++|+=
T Consensus        74 ~~~~pdiVfHaAA~KhVp---l~E~~p---~eav~tNv~GT~nv~~aa~~----~~v~~~v~ISTD  129 (293)
T PF02719_consen   74 EEYKPDIVFHAAALKHVP---LMEDNP---FEAVKTNVLGTQNVAEAAIE----HGVERFVFISTD  129 (293)
T ss_dssp             T--T-SEEEE------HH---HHCCCH---HHHHHHHCHHHHHHHHHHHH----TT-SEEEEEEEC
T ss_pred             hhcCCCEEEEChhcCCCC---hHHhCH---HHHHHHHHHHHHHHHHHHHH----cCCCEEEEcccc
Confidence            444699999999875542   344444   45899999999999999865    356789999974

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.45  E-value=3.5e-12  Score=106.44  Aligned_cols=93  Identities=16%  Similarity=0.172  Sum_probs=72.5

Q ss_pred             cccCCcEEEEEcCCChHHHH--HHHHHHHcCCeEEEEecChhHH------------HHHHHHHHhhCCCceeEEEEEecc
Q 045749           59 LKSYGSWALITGATDGIGKA--FAHQLAQHGLNLILVSRNHNKL------------EKISNEIQAENPNTQINIVEYDFS  124 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~--~a~~l~~~G~~Vi~~~r~~~~l------------~~~~~~l~~~~~~~~~~~~~~D~~  124 (210)
                      ....||++||||+++|+|.+  +|+.| +.|++|+++++..++.            +...+++++.  +.....+.+|++
T Consensus        37 ~~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~--G~~a~~i~~DVs  113 (398)
T PRK13656         37 IANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA--GLYAKSINGDAF  113 (398)
T ss_pred             cCCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc--CCceEEEEcCCC
Confidence            33457999999999999999  89999 9999998888643222            1233344332  445677899999


Q ss_pred             cCccchhhHHHHHHHhcCCCccEEEEcCCCCC
Q 045749          125 CDVVSAGNIKAIEMAIDGLEVGVLINNVGITY  156 (210)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~  156 (210)
                      ++++..+.++.+.+.++  ++|+||||+|...
T Consensus       114 s~E~v~~lie~I~e~~G--~IDiLVnSaA~~~  143 (398)
T PRK13656        114 SDEIKQKVIELIKQDLG--QVDLVVYSLASPR  143 (398)
T ss_pred             CHHHHHHHHHHHHHhcC--CCCEEEECCccCC
Confidence            99888888889988887  6999999999873

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.44  E-value=3.2e-12  Score=102.24  Aligned_cols=120  Identities=18%  Similarity=0.184  Sum_probs=86.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .++++++||||+|+||++++++|+++|++|++..|+.++.++...    .  +..+.++.+|+++..      +.+.+.+
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~--~~~~~~~~~Dl~d~~------~~l~~~~   82 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----Q--DPSLQIVRADVTEGS------DKLVEAI   82 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----c--CCceEEEEeeCCCCH------HHHHHHh
Confidence            457899999999999999999999999999999999876543211    1  235778889988631      2333334


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      .. ++|++|+|+|......    .  .    ..+++|+.++.++++++    .+++.++||++||.+
T Consensus        83 ~~-~~d~vi~~~g~~~~~~----~--~----~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~  134 (251)
T PLN00141         83 GD-DSDAVICATGFRRSFD----P--F----APWKVDNFGTVNLVEAC----RKAGVTRFILVSSIL  134 (251)
T ss_pred             hc-CCCEEEECCCCCcCCC----C--C----CceeeehHHHHHHHHHH----HHcCCCEEEEEcccc
Confidence            21 5899999998642210    1  1    12578888988888885    456678999999975

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.44  E-value=2.2e-12  Score=108.01  Aligned_cols=131  Identities=13%  Similarity=0.104  Sum_probs=90.4

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhC---CCceeEEEEEecccCccchhhHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN---PNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~---~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      ++.+++|+++||||+|-||..++++|.++|++|++++|..........+.....   ...++.++.+|+.+.    +   
T Consensus        10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~----~---   82 (348)
T PRK15181         10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKF----T---   82 (348)
T ss_pred             cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCH----H---
Confidence            455668899999999999999999999999999999986543222222221111   113567788888765    2   


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          135 AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      .+.+.+.  ++|++||.|+......      +.++....+++|+.|+.++.+++.    +.+..++|++||.+
T Consensus        83 ~l~~~~~--~~d~ViHlAa~~~~~~------~~~~~~~~~~~Nv~gt~nll~~~~----~~~~~~~v~~SS~~  143 (348)
T PRK15181         83 DCQKACK--NVDYVLHQAALGSVPR------SLKDPIATNSANIDGFLNMLTAAR----DAHVSSFTYAASSS  143 (348)
T ss_pred             HHHHHhh--CCCEEEECccccCchh------hhhCHHHHHHHHHHHHHHHHHHHH----HcCCCeEEEeechH
Confidence            2333333  4789999999653311      222334579999999999998863    34556899999874

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.43  E-value=3.3e-12  Score=104.13  Aligned_cols=128  Identities=18%  Similarity=0.202  Sum_probs=96.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh-CCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAE-NPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .++.|+||||+|-||..++++|+++||+|..+.|++++-++. +.+++. +...+...+..|+.++.       .+.+.+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~-~~L~~l~~a~~~l~l~~aDL~d~~-------sf~~ai   76 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT-EHLRKLEGAKERLKLFKADLLDEG-------SFDKAI   76 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH-HHHHhcccCcccceEEeccccccc-------hHHHHH
Confidence            478999999999999999999999999999999998874432 223222 11445889999999883       444455


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .  ..|+++|.|......     ..+  .-.+.++.++.|+.++.+++...   ..-.|||++||.+++
T Consensus        77 ~--gcdgVfH~Asp~~~~-----~~~--~e~~li~pav~Gt~nVL~ac~~~---~sVkrvV~TSS~aAv  133 (327)
T KOG1502|consen   77 D--GCDGVFHTASPVDFD-----LED--PEKELIDPAVKGTKNVLEACKKT---KSVKRVVYTSSTAAV  133 (327)
T ss_pred             h--CCCEEEEeCccCCCC-----CCC--cHHhhhhHHHHHHHHHHHHHhcc---CCcceEEEeccHHHh
Confidence            5  388999999865432     112  22368999999999999997542   235799999999886

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.43  E-value=2.4e-13  Score=108.15  Aligned_cols=101  Identities=27%  Similarity=0.285  Sum_probs=76.4

Q ss_pred             HHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCccEEEEcCCCCCCC
Q 045749           79 FAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPK  158 (210)
Q Consensus        79 ~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~  158 (210)
                      +|++|+++|++|++++|++++.+.             ..++++|+++..+.++    +.+...+ ++|++|||||.... 
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~-------------~~~~~~Dl~~~~~v~~----~~~~~~~-~iD~li~nAG~~~~-   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL-------------DGFIQADLGDPASIDA----AVAALPG-RIDALFNIAGVPGT-   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh-------------hHhhcccCCCHHHHHH----HHHHhcC-CCeEEEECCCCCCC-
Confidence            478999999999999999765421             1235678877644443    3333322 69999999997421 


Q ss_pred             cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          159 AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       159 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                               +++++++++|+.+++.+++.++|+|.+  .|+||++||.+++
T Consensus        62 ---------~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~  101 (241)
T PRK12428         62 ---------APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGA  101 (241)
T ss_pred             ---------CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhh
Confidence                     247899999999999999999998853  4899999998764

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.43  E-value=2.2e-12  Score=107.94  Aligned_cols=126  Identities=13%  Similarity=0.097  Sum_probs=85.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCh--hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLN-LILVSRNH--NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +++||||+|+||.+++++|+++|.+ |+.+++..  ...+.    +....++.++.++.+|+++..+    ++++.+.  
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~----~~~~~~~--   71 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLES----LADVSDSERYVFEHADICDRAE----LDRIFAQ--   71 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHH----HHhcccCCceEEEEecCCCHHH----HHHHHHh--
Confidence            5899999999999999999999987 55555532  12221    1111123456778889987632    2333222  


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-----CCCEEEEecccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-----KKGAIVNIGSGA  207 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-----~~g~iv~isS~a  207 (210)
                       .++|++||+||......      +.++.++.+++|+.|+.++++++.++|.+.     +..++|++||.+
T Consensus        72 -~~~d~vih~A~~~~~~~------~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~  135 (352)
T PRK10084         72 -HQPDAVMHLAAESHVDR------SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE  135 (352)
T ss_pred             -cCCCEEEECCcccCCcc------hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh
Confidence             25899999999653211      223346689999999999999998766421     234899999964

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.41  E-value=2.5e-12  Score=105.93  Aligned_cols=123  Identities=17%  Similarity=0.186  Sum_probs=84.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+++||++++++|.++|++|++.+|......+...+..+   ...+..+.+|++++.+    ++++.+.   .+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~----~~~~~~~---~~   70 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER---ITRVTFVEGDLRDREL----LDRLFEE---HK   70 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc---ccceEEEECCCCCHHH----HHHHHHh---CC
Confidence            378999999999999999999999999887654332222222221   1146677788876632    3333222   26


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +|++|||||.....+      +.++..+.++.|+.++..+++++    .+.+.+++|++||.+
T Consensus        71 ~d~vv~~ag~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~ss~~  123 (328)
T TIGR01179        71 IDAVIHFAGLIAVGE------SVQDPLKYYRNNVVNTLNLLEAM----QQTGVKKFIFSSSAA  123 (328)
T ss_pred             CcEEEECccccCcch------hhcCchhhhhhhHHHHHHHHHHH----HhcCCCEEEEecchh
Confidence            999999999753321      23344567899999999998874    344557999999864

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.40  E-value=4.3e-12  Score=104.15  Aligned_cols=124  Identities=13%  Similarity=0.130  Sum_probs=84.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhH-HHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           65 WALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNK-LEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~-l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +++||||+|+||.+++++|+++|  .+|++.+|.... -.+..+.+.   ...++.++.+|++++.+    +.++.+.  
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~----~~~~~~~--   71 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDREL----VSRLFTE--   71 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHH----HHHHHhh--
Confidence            38999999999999999999987  688888764211 111111221   12356778889887632    2233222  


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                       .++|++||+|+....      +.+.++.+..+++|+.++.++++++.+.+   .+.++|++||.+
T Consensus        72 -~~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~  127 (317)
T TIGR01181        72 -HQPDAVVHFAAESHV------DRSISGPAAFIETNVVGTYTLLEAVRKYW---HEFRFHHISTDE  127 (317)
T ss_pred             -cCCCEEEEcccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHhcC---CCceEEEeeccc
Confidence             258999999986532      22445567789999999999998875532   234799999853

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.39  E-value=8.4e-12  Score=106.09  Aligned_cols=126  Identities=17%  Similarity=0.161  Sum_probs=86.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH--HHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK--ISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~--~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ..+++++||||+|+||++++++|+++|++|++++|+.++.+.  ..++....  ...+.++.+|++++++..    ++.+
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~----~~~~  131 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLR----KVLF  131 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHH----HHHH
Confidence            347899999999999999999999999999999998765432  11222222  235678889998874333    3333


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ..+. ++|++|||+|.....       ..    ..+++|+.++.++.+++    ++.+.+++|++||.+.
T Consensus       132 ~~~~-~~D~Vi~~aa~~~~~-------~~----~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~v  185 (390)
T PLN02657        132 SEGD-PVDVVVSCLASRTGG-------VK----DSWKIDYQATKNSLDAG----REVGAKHFVLLSAICV  185 (390)
T ss_pred             HhCC-CCcEEEECCccCCCC-------Cc----cchhhHHHHHHHHHHHH----HHcCCCEEEEEeeccc
Confidence            2221 589999999853211       11    23567888877777764    4556679999999753

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.38  E-value=3.6e-12  Score=105.21  Aligned_cols=115  Identities=22%  Similarity=0.244  Sum_probs=85.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+|+||..++++|+++|++|++++|++++....    .    ...+..+.+|+++..       .+.+.+.  +
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~----~~~~~~~~~D~~~~~-------~l~~~~~--~   64 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E----GLDVEIVEGDLRDPA-------SLRKAVA--G   64 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c----cCCceEEEeeCCCHH-------HHHHHHh--C
Confidence            689999999999999999999999999999987653221    1    235677888887762       2333333  4


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +|++||+|+....        ..++.++.+++|+.++.++.+++.    +.+.+++|++||.+.
T Consensus        65 ~d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~  116 (328)
T TIGR03466        65 CRALFHVAADYRL--------WAPDPEEMYAANVEGTRNLLRAAL----EAGVERVVYTSSVAT  116 (328)
T ss_pred             CCEEEEeceeccc--------CCCCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEechhh
Confidence            7899999975321        112345789999999999988864    345579999999754

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.31  E-value=2.3e-11  Score=97.43  Aligned_cols=119  Identities=16%  Similarity=0.163  Sum_probs=89.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      .+|||||++-||...+.+|.+.|++|++.|.-...-.+..+..       ...+++.|+.|.    +.++++.++   .+
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~----~~L~~vf~~---~~   67 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDR----ALLTAVFEE---NK   67 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccH----HHHHHHHHh---cC
Confidence            6899999999999999999999999999998654433332221       156778888766    333444333   36


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +|.++|-||....+.      +.++-.+.++.|+.|+..|.++    |++.+-.++||-||.+
T Consensus        68 idaViHFAa~~~VgE------Sv~~Pl~Yy~NNv~gTl~Ll~a----m~~~gv~~~vFSStAa  120 (329)
T COG1087          68 IDAVVHFAASISVGE------SVQNPLKYYDNNVVGTLNLIEA----MLQTGVKKFIFSSTAA  120 (329)
T ss_pred             CCEEEECccccccch------hhhCHHHHHhhchHhHHHHHHH----HHHhCCCEEEEecchh
Confidence            999999999765432      5566678999999999999888    6666777899888765

>PLN02686 cinnamoyl-CoA reductase

Probab=99.29  E-value=6.3e-11  Score=99.97  Aligned_cols=129  Identities=16%  Similarity=0.188  Sum_probs=86.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhC----CCceeEEEEEecccCccchhhHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN----PNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~----~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      ...+|+++||||+++||.+++++|+++|++|+++.|+.+..+++ +++....    ....+.++..|+++..       .
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~-------~  121 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPE-------S  121 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHH-------H
Confidence            35689999999999999999999999999999988887665544 2332110    0124677888887762       2


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +.+.+.  .+|.++|.|+...+..  ...    ..+...++|+.++.++.+++...   .+-.++|++||.+
T Consensus       122 l~~~i~--~~d~V~hlA~~~~~~~--~~~----~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~  182 (367)
T PLN02686        122 LHEAFD--GCAGVFHTSAFVDPAG--LSG----YTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLL  182 (367)
T ss_pred             HHHHHH--hccEEEecCeeecccc--ccc----ccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHH
Confidence            222233  3678889888654321  101    11234678888888888885421   1346899999964

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.27  E-value=4.8e-11  Score=97.11  Aligned_cols=118  Identities=19%  Similarity=0.273  Sum_probs=86.5

Q ss_pred             EEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           67 LITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        67 lITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      |||||+|-+|.+++++|.++|  ++|.+.++++.....  .....   .....++.+|+++.       +.+.+.+.  .
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~---~~~~~~~~~Di~d~-------~~l~~a~~--g   66 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK---SGVKEYIQGDITDP-------ESLEEALE--G   66 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc---ccceeEEEeccccH-------HHHHHHhc--C
Confidence            699999999999999999999  789988887654221  11111   12223888999887       34444555  4


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .|+++|.|+.....       .....++++++|+.|+-++.+++.    +.+-.++|++||.+++
T Consensus        67 ~d~V~H~Aa~~~~~-------~~~~~~~~~~vNV~GT~nvl~aa~----~~~VkrlVytSS~~vv  120 (280)
T PF01073_consen   67 VDVVFHTAAPVPPW-------GDYPPEEYYKVNVDGTRNVLEAAR----KAGVKRLVYTSSISVV  120 (280)
T ss_pred             CceEEEeCcccccc-------CcccHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcCccee
Confidence            78999999875431       123446799999999999999875    3466799999998764

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02427 UDP-apiose/xylose synthase

Probab=99.26  E-value=8e-11  Score=99.91  Aligned_cols=124  Identities=15%  Similarity=0.190  Sum_probs=83.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .++++||||+|-||..++++|.++ |++|++++|+.++.+.......... ..++.++.+|+.+..       .+.+.+.
T Consensus        14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~-~~~~~~~~~Dl~d~~-------~l~~~~~   85 (386)
T PLN02427         14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPW-SGRIQFHRINIKHDS-------RLEGLIK   85 (386)
T ss_pred             CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccC-CCCeEEEEcCCCChH-------HHHHHhh
Confidence            568999999999999999999998 5899999988655433221100000 235788888887662       2333333


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                        .+|++||+|+...+..  . ..++   .+.+..|+.++.++.+++.    +.+ .++|++||..
T Consensus        86 --~~d~ViHlAa~~~~~~--~-~~~~---~~~~~~n~~gt~~ll~aa~----~~~-~r~v~~SS~~  138 (386)
T PLN02427         86 --MADLTINLAAICTPAD--Y-NTRP---LDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCE  138 (386)
T ss_pred             --cCCEEEEcccccChhh--h-hhCh---HHHHHHHHHHHHHHHHHHH----hcC-CEEEEEeeee
Confidence              3789999999754311  1 1122   2345679999998888763    233 6899999964

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.25  E-value=1.5e-11  Score=97.04  Aligned_cols=102  Identities=14%  Similarity=0.142  Sum_probs=73.3

Q ss_pred             cEEEEEcC-CChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGA-TDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGa-ssGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .+=.||.. |||||+++|++|+++|++|+++++...        +...  .    ...+|+++..+..+.++.+.+.++ 
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~--~----~~~~Dv~d~~s~~~l~~~v~~~~g-   79 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPE--P----HPNLSIREIETTKDLLITLKELVQ-   79 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cccc--c----CCcceeecHHHHHHHHHHHHHHcC-
Confidence            34456655 678999999999999999999986311        1110  1    134688777677776777777766 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHH
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTK  186 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  186 (210)
                       ++|++|||||+....+  +.+.+.++|++++..   +.+++++
T Consensus        80 -~iDiLVnnAgv~d~~~--~~~~s~e~~~~~~~~---~~~~~~~  117 (227)
T TIGR02114        80 -EHDILIHSMAVSDYTP--VYMTDLEQVQASDNL---NEFLSKQ  117 (227)
T ss_pred             -CCCEEEECCEeccccc--hhhCCHHHHhhhcch---hhhhccc
Confidence             6899999999876544  778899999988554   5566554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.25  E-value=8.5e-11  Score=94.99  Aligned_cols=128  Identities=16%  Similarity=0.206  Sum_probs=95.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhC-CCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN-PNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ++.|+||||++-||.+.+.+|.++|+.|+++|.-.....+..+.++... ....+.+...|+.|.    +.++++.+.  
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~----~~L~kvF~~--   75 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDA----EALEKLFSE--   75 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCH----HHHHHHHhh--
Confidence            6789999999999999999999999999999875443333333333332 146788999998776    334444444  


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                       .++|.++|-|+....++      +.+...+..+.|+.|++.+...    |++.+...+|+.||+.
T Consensus        76 -~~fd~V~Hfa~~~~vge------S~~~p~~Y~~nNi~gtlnlLe~----~~~~~~~~~V~sssat  130 (343)
T KOG1371|consen   76 -VKFDAVMHFAALAAVGE------SMENPLSYYHNNIAGTLNLLEV----MKAHNVKALVFSSSAT  130 (343)
T ss_pred             -cCCceEEeehhhhccch------hhhCchhheehhhhhHHHHHHH----HHHcCCceEEEeccee
Confidence             35999999999765543      3344477899999999998887    6666778899999875

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.25  E-value=2.4e-10  Score=95.50  Aligned_cols=128  Identities=16%  Similarity=0.233  Sum_probs=85.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhH---HHHHHHHHHhhCC-----C-ceeEEEEEecccCccchhhH
Q 045749           65 WALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNK---LEKISNEIQAENP-----N-TQINIVEYDFSCDVVSAGNI  133 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~---l~~~~~~l~~~~~-----~-~~~~~~~~D~~~~~~~~~~~  133 (210)
                      +++||||+|+||++++++|+++|  ++|+++.|+.+.   .+++.+.+.....     . .++..+.+|++++..-.. .
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~-~   79 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLS-D   79 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcC-H
Confidence            47999999999999999999999  779999997652   2233333322110     1 467888899887632111 0


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          134 KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       134 ~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +...+...  .+|++||||+.....         ..++..+++|+.|+..+.+.+..    .+..+++++||.+.
T Consensus        80 ~~~~~~~~--~~d~vih~a~~~~~~---------~~~~~~~~~nv~g~~~ll~~a~~----~~~~~~v~iSS~~v  139 (367)
T TIGR01746        80 AEWERLAE--NVDTIVHNGALVNWV---------YPYSELRAANVLGTREVLRLAAS----GRAKPLHYVSTISV  139 (367)
T ss_pred             HHHHHHHh--hCCEEEeCCcEeccC---------CcHHHHhhhhhHHHHHHHHHHhh----CCCceEEEEccccc
Confidence            11222222  589999999865321         12456788999999998887643    34456999999864

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.20  E-value=2.6e-10  Score=95.33  Aligned_cols=118  Identities=14%  Similarity=0.259  Sum_probs=82.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      ++++||||+|-||..++++|.++ |++|+.++|+.++...    +   .+...+.++..|+.++   .+   .+.+... 
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~---~~~~~~~~~~~Dl~~~---~~---~~~~~~~-   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----L---VNHPRMHFFEGDITIN---KE---WIEYHVK-   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----h---ccCCCeEEEeCCCCCC---HH---HHHHHHc-
Confidence            46999999999999999999986 6999999987643321    1   1133577788888743   12   2223333 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                       ++|++||+|+...+..      ..++-+..+++|+.++.++.+++.    +.+ .++|++||..
T Consensus        68 -~~d~ViH~aa~~~~~~------~~~~p~~~~~~n~~~~~~ll~aa~----~~~-~~~v~~SS~~  120 (347)
T PRK11908         68 -KCDVILPLVAIATPAT------YVKQPLRVFELDFEANLPIVRSAV----KYG-KHLVFPSTSE  120 (347)
T ss_pred             -CCCEEEECcccCChHH------hhcCcHHHHHHHHHHHHHHHHHHH----hcC-CeEEEEecce
Confidence             4899999998754321      112234678999999998888754    334 5899999974

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.18  E-value=2e-10  Score=93.38  Aligned_cols=101  Identities=20%  Similarity=0.313  Sum_probs=73.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCc
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEV  145 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~i  145 (210)
                      ++||||++.||.+++++|.++|++|++++|+                       ..|+.+.    +   .+.+.+.+.++
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~----~---~~~~~~~~~~~   51 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDP----E---ALERLLRAIRP   51 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCH----H---HHHHHHHhCCC
Confidence            7999999999999999999999999999885                       1355443    2   23333333358


Q ss_pred             cEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          146 GVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       146 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      |++||+||......      ..+..+..+++|+.++..+.+++..    .+ .++|++||.+
T Consensus        52 d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~Ss~~  102 (287)
T TIGR01214        52 DAVVNTAAYTDVDG------AESDPEKAFAVNALAPQNLARAAAR----HG-ARLVHISTDY  102 (287)
T ss_pred             CEEEECCccccccc------cccCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEeeee
Confidence            99999999653211      1233456889999999999988643    33 4899999864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.17  E-value=4.5e-10  Score=101.72  Aligned_cols=125  Identities=13%  Similarity=0.187  Sum_probs=84.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCh--hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQH--GLNLILVSRNH--NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~--G~~Vi~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+|+++||||+|.||.+++++|.++  |++|+..+|..  ++...    +.......++.++.+|+++..    .++.+.
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~----l~~~~~~~~v~~~~~Dl~d~~----~~~~~~   76 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKN----LNPSKSSPNFKFVKGDIASAD----LVNYLL   76 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhh----hhhcccCCCeEEEECCCCChH----HHHHHH
Confidence            4789999999999999999999988  67899888753  22221    111111345778888888762    222222


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGA  207 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~a  207 (210)
                      ..   .++|++||+|+.....      .+.++..+.+++|+.|+.++.+++.    +.+ ..++|++||..
T Consensus        77 ~~---~~~D~ViHlAa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~vkr~I~~SS~~  134 (668)
T PLN02260         77 IT---EGIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDE  134 (668)
T ss_pred             hh---cCCCEEEECCCccCch------hhhhCHHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEcchH
Confidence            11   2589999999975431      1222334678999999999888753    333 46899999964

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.16  E-value=3.6e-10  Score=97.55  Aligned_cols=119  Identities=13%  Similarity=0.162  Sum_probs=81.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .++++++||||+|-||..++++|.++|++|++++|......+   .........++..+..|+.++        .    .
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~---~~~~~~~~~~~~~i~~D~~~~--------~----l  181 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE---NVMHHFSNPNFELIRHDVVEP--------I----L  181 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhhhhccCCceEEEECCccCh--------h----h
Confidence            457899999999999999999999999999999875432211   111111133455666665433        1    1


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      .  .+|++||.|+...+..      ..++..+.+++|+.|+.++.+++..    .+ .++|++||..
T Consensus       182 ~--~~D~ViHlAa~~~~~~------~~~~p~~~~~~Nv~gt~nLleaa~~----~g-~r~V~~SS~~  235 (442)
T PLN02206        182 L--EVDQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSE  235 (442)
T ss_pred             c--CCCEEEEeeeecchhh------hhcCHHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECChH
Confidence            1  4899999998654321      1112346899999999999988643    34 4899999975

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.16  E-value=2.6e-10  Score=89.77  Aligned_cols=118  Identities=22%  Similarity=0.288  Sum_probs=85.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCc
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEV  145 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~i  145 (210)
                      |+||||+|-+|.+++++|.++|..|+...|+.........+       .++.+..+|+.+.    +.++++.+..   ++
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~----~~~~~~~~~~---~~   66 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDK----EQLEKLLEKA---NI   66 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSH----HHHHHHHHHH---TE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccc----cccccccccc---Cc
Confidence            68999999999999999999999988888876543222111       1677888888855    3344444433   58


Q ss_pred             cEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          146 GVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       146 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      |.++|+|+....      ..+.++....++.|+.+...+.+.+.    +.+..++|++||..
T Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~i~~sS~~  118 (236)
T PF01370_consen   67 DVVIHLAAFSSN------PESFEDPEEIIEANVQGTRNLLEAAR----EAGVKRFIFLSSAS  118 (236)
T ss_dssp             SEEEEEBSSSSH------HHHHHSHHHHHHHHHHHHHHHHHHHH----HHTTSEEEEEEEGG
T ss_pred             eEEEEeeccccc------cccccccccccccccccccccccccc----cccccccccccccc
Confidence            999999986531      11235566788999988888887754    34557999999964

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.15  E-value=5.2e-10  Score=101.16  Aligned_cols=121  Identities=16%  Similarity=0.238  Sum_probs=85.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ..+++|+||||+|-||.+++++|.++ |++|+.++|+......    .   .+..++.++.+|++++.   .   .+.+.
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~---~~~~~~~~~~gDl~d~~---~---~l~~~  379 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----F---LGHPRFHFVEGDISIHS---E---WIEYH  379 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----h---cCCCceEEEeccccCcH---H---HHHHH
Confidence            35789999999999999999999985 7999999997643221    1   11235777888888752   1   12223


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +.  ++|++||.|+...+..      ..++.+..+++|+.++.++.+++..    .+ .++|++||.+
T Consensus       380 l~--~~D~ViHlAa~~~~~~------~~~~~~~~~~~Nv~~t~~ll~a~~~----~~-~~~V~~SS~~  434 (660)
T PRK08125        380 IK--KCDVVLPLVAIATPIE------YTRNPLRVFELDFEENLKIIRYCVK----YN-KRIIFPSTSE  434 (660)
T ss_pred             hc--CCCEEEECccccCchh------hccCHHHHHHhhHHHHHHHHHHHHh----cC-CeEEEEcchh
Confidence            33  4899999999765421      1122345789999999999988653    33 5899999964

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.15  E-value=9e-10  Score=91.10  Aligned_cols=111  Identities=17%  Similarity=0.209  Sum_probs=79.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+|.+|++++++|.++|++|.+.+|+.++...    +.    ...+.++.+|+.++       +.+.+.+.  .
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~----~~~v~~v~~Dl~d~-------~~l~~al~--g   64 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LK----EWGAELVYGDLSLP-------ETLPPSFK--G   64 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hh----hcCCEEEECCCCCH-------HHHHHHHC--C
Confidence            58999999999999999999999999999998754322    21    12467788888776       23444444  4


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +|++||+++....        +   .....++|+.++.++.+++    ++.+-.++|++||..
T Consensus        65 ~d~Vi~~~~~~~~--------~---~~~~~~~~~~~~~~l~~aa----~~~gvkr~I~~Ss~~  112 (317)
T CHL00194         65 VTAIIDASTSRPS--------D---LYNAKQIDWDGKLALIEAA----KAAKIKRFIFFSILN  112 (317)
T ss_pred             CCEEEECCCCCCC--------C---ccchhhhhHHHHHHHHHHH----HHcCCCEEEEecccc
Confidence            7899998763211        1   1235667888887777764    445556999999853

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.12  E-value=1.5e-09  Score=82.39  Aligned_cols=101  Identities=21%  Similarity=0.329  Sum_probs=79.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCc
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEV  145 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~i  145 (210)
                      |+|+||+|.+|+.++++|.++|++|++..|++++.++          ..++.++.+|+.+.       +.+.+.+.  +.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~-------~~~~~al~--~~   61 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDP-------DSVKAALK--GA   61 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCH-------HHHHHHHT--TS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhh-------hhhhhhhh--hc
Confidence            6899999999999999999999999999999987765          34677888888655       44555555  48


Q ss_pred             cEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          146 GVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       146 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      |.+|+++|....          +             ...++.++..+++.+..++|.+||...
T Consensus        62 d~vi~~~~~~~~----------~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~  101 (183)
T PF13460_consen   62 DAVIHAAGPPPK----------D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGV  101 (183)
T ss_dssp             SEEEECCHSTTT----------H-------------HHHHHHHHHHHHHTTSSEEEEEEETTG
T ss_pred             chhhhhhhhhcc----------c-------------ccccccccccccccccccceeeecccc
Confidence            899999964311          1             445566677777788889999998753

...

>PRK05865 hypothetical protein; Provisional

Probab=99.12  E-value=9.5e-10  Score=100.75  Aligned_cols=103  Identities=23%  Similarity=0.340  Sum_probs=76.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||++.||.+++++|+++|++|++++|+....      .     ...+.++.+|+++..       .+.+.+.  +
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~-------~l~~al~--~   61 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDAT-------AVESAMT--G   61 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHH-------HHHHHHh--C
Confidence            589999999999999999999999999999975321      1     124667788887762       2333333  4


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      +|++||+|+....               .+++|+.++.++.++    +.+.+.+++|++||.
T Consensus        62 vD~VVHlAa~~~~---------------~~~vNv~GT~nLLeA----a~~~gvkr~V~iSS~  104 (854)
T PRK05865         62 ADVVAHCAWVRGR---------------NDHINIDGTANVLKA----MAETGTGRIVFTSSG  104 (854)
T ss_pred             CCEEEECCCcccc---------------hHHHHHHHHHHHHHH----HHHcCCCeEEEECCc
Confidence            8999999975311               367899998777655    555666799999996

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.10  E-value=5.3e-10  Score=91.85  Aligned_cols=114  Identities=12%  Similarity=0.204  Sum_probs=75.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH-hcCC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA-IDGL  143 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~  143 (210)
                      ++||||+|.||.+++++|.++|+ .|++++|..... .. .++.     .  ..+..|+++    .+..+.+.+. +.  
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~-----~--~~~~~d~~~----~~~~~~~~~~~~~--   65 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNLA-----D--LVIADYIDK----EDFLDRLEKGAFG--   65 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhhh-----h--eeeeccCcc----hhHHHHHHhhccC--
Confidence            58999999999999999999998 688888764321 11 1111     1  122333333    3434444432 22  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      ++|++||+|+....        +.++.+..+++|+.++.++.+++..    .+ .++|++||.+
T Consensus        66 ~~D~vvh~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~v~~SS~~  116 (314)
T TIGR02197        66 KIEAIFHQGACSDT--------TETDGEYMMENNYQYSKRLLDWCAE----KG-IPFIYASSAA  116 (314)
T ss_pred             CCCEEEECccccCc--------cccchHHHHHHHHHHHHHHHHHHHH----hC-CcEEEEccHH
Confidence            69999999996421        2234567899999999999988643    33 4799999964

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.09  E-value=1.3e-09  Score=93.85  Aligned_cols=120  Identities=12%  Similarity=0.152  Sum_probs=81.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.+.++++||||+|-||..++++|.++|++|++++|......+....+   .....+..+..|+.++.            
T Consensus       117 ~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~------------  181 (436)
T PLN02166        117 GRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL---FGNPRFELIRHDVVEPI------------  181 (436)
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh---ccCCceEEEECcccccc------------
Confidence            345678999999999999999999999999999998643211111111   11234555555554320            


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      ..  ++|++||.|+...+..  . +.+   -...+++|+.|+.++.+++..    .+ .++|++||.+
T Consensus       182 ~~--~~D~ViHlAa~~~~~~--~-~~~---p~~~~~~Nv~gT~nLleaa~~----~g-~r~V~~SS~~  236 (436)
T PLN02166        182 LL--EVDQIYHLACPASPVH--Y-KYN---PVKTIKTNVMGTLNMLGLAKR----VG-ARFLLTSTSE  236 (436)
T ss_pred             cc--CCCEEEECceeccchh--h-ccC---HHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECcHH
Confidence            11  4899999998654321  1 112   346899999999999988653    23 4899999874

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.09  E-value=1.2e-09  Score=89.52  Aligned_cols=117  Identities=17%  Similarity=0.226  Sum_probs=82.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      .++||||+|-||..++++|.++|++|..++|...+.....         .....+.+|+++.    +   ...+.....+
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~----~---~~~~~~~~~~   65 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDR----D---LVDELAKGVP   65 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccch----H---HHHHHHhcCC
Confidence            3899999999999999999999999999999876543221         2345556666655    2   2222222212


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                       |.+||+|+......    .... +....+++|+.++.++.+++..    .+..++|+.||.+
T Consensus        66 -d~vih~aa~~~~~~----~~~~-~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~  118 (314)
T COG0451          66 -DAVIHLAAQSSVPD----SNAS-DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVS  118 (314)
T ss_pred             -CEEEEccccCchhh----hhhh-CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCc
Confidence             89999999765422    1111 4556899999999999998654    5667899977654

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.09  E-value=8.1e-10  Score=90.78  Aligned_cols=117  Identities=19%  Similarity=0.200  Sum_probs=71.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCc
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEV  145 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~i  145 (210)
                      ++||||+|.||++++++|+++|++++++.|+....... ..+           ..+|+.+....++..+.+.+.....++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~~-----------~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VNL-----------VDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hhh-----------hhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            79999999999999999999999766655543321110 011           113443332122222222111111258


Q ss_pred             cEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          146 GVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       146 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      |++||+||.....     +.+.   +..++.|+.++.++.+++.    +.+ .++|++||.+
T Consensus        70 d~Vih~A~~~~~~-----~~~~---~~~~~~n~~~t~~ll~~~~----~~~-~~~i~~SS~~  118 (308)
T PRK11150         70 EAIFHEGACSSTT-----EWDG---KYMMDNNYQYSKELLHYCL----ERE-IPFLYASSAA  118 (308)
T ss_pred             cEEEECceecCCc-----CCCh---HHHHHHHHHHHHHHHHHHH----HcC-CcEEEEcchH
Confidence            9999999854321     1122   3478999999999888864    334 3799999975

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.08  E-value=1.7e-09  Score=91.41  Aligned_cols=121  Identities=16%  Similarity=0.015  Sum_probs=80.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      -.+++++||||+|-||.+++++|.++|++|+.++|......      ...  ......+..|+.+.       ..+.+..
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~--~~~~~~~~~Dl~d~-------~~~~~~~   83 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SED--MFCHEFHLVDLRVM-------ENCLKVT   83 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccc--cccceEEECCCCCH-------HHHHHHH
Confidence            35789999999999999999999999999999998643211      000  11234556677644       2223223


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      .  ++|++||.|+......  ..+   ++.+..++.|+.++.++.+++.    +.+..++|++||..
T Consensus        84 ~--~~D~Vih~Aa~~~~~~--~~~---~~~~~~~~~N~~~t~nll~aa~----~~~vk~~V~~SS~~  139 (370)
T PLN02695         84 K--GVDHVFNLAADMGGMG--FIQ---SNHSVIMYNNTMISFNMLEAAR----INGVKRFFYASSAC  139 (370)
T ss_pred             h--CCCEEEEcccccCCcc--ccc---cCchhhHHHHHHHHHHHHHHHH----HhCCCEEEEeCchh
Confidence            3  4799999998643211  111   1223457789999999888753    34556999999964

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.08  E-value=9e-10  Score=90.41  Aligned_cols=105  Identities=21%  Similarity=0.161  Sum_probs=73.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+|-||.+++++|.++| +|+.++|...                   .+..|+++.    +.++++.+.   .+
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~----~~~~~~~~~---~~   54 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNP----EGVAETVRK---IR   54 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCH----HHHHHHHHh---cC
Confidence            59999999999999999999999 8888887521                   112466554    223333222   25


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +|++||+|+......      ..++-+..+++|+.++.++.+++..    .+ .++|++||..
T Consensus        55 ~D~Vih~Aa~~~~~~------~~~~~~~~~~~N~~~~~~l~~aa~~----~g-~~~v~~Ss~~  106 (299)
T PRK09987         55 PDVIVNAAAHTAVDK------AESEPEFAQLLNATSVEAIAKAANE----VG-AWVVHYSTDY  106 (299)
T ss_pred             CCEEEECCccCCcch------hhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEccce
Confidence            899999999754321      2223345778999999999988643    33 4799999853

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.03  E-value=2.4e-09  Score=81.31  Aligned_cols=85  Identities=21%  Similarity=0.273  Sum_probs=68.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+ |+|.+++++|+++|++|++.+|++++.++....+..   ..++.++.+|++++.+..+.++...+..+  +
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g--~   75 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNG--P   75 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcC--C
Confidence            58999998 888899999999999999999998877766554532   34678888999999888887777766665  6


Q ss_pred             ccEEEEcCCCC
Q 045749          145 VGVLINNVGIT  155 (210)
Q Consensus       145 id~lvnnAg~~  155 (210)
                      +|++|+.+-..
T Consensus        76 id~lv~~vh~~   86 (177)
T PRK08309         76 FDLAVAWIHSS   86 (177)
T ss_pred             CeEEEEecccc
Confidence            89999887654

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.03  E-value=1.3e-08  Score=82.68  Aligned_cols=136  Identities=14%  Similarity=0.192  Sum_probs=103.4

Q ss_pred             CcEEEEEcC-CChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGA-TDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGa-ssGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .++|+|.|. ..-+++.+|..|-++|+.|+++..+.++.+...++-     ...+.....|..++.+....+.++.+.+.
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~-----~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED-----RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc-----CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            468999996 799999999999999999999999987655443322     34477777787777777888888877766


Q ss_pred             CC------------CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC--CCCEEEEec
Q 045749          142 GL------------EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR--KKGAIVNIG  204 (210)
Q Consensus       142 ~~------------~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~--~~g~iv~is  204 (210)
                      ..            .+..+|.--.... ..+++++++.+.|.+.++.|+.-++.+++.++|+++.+  ++.+||.+.
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~y-p~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~  153 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSY-PTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFN  153 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEe
Confidence            32            3444554444443 34668899999999999999999999999999998872  345665544

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.02  E-value=9.6e-09  Score=92.84  Aligned_cols=125  Identities=16%  Similarity=0.198  Sum_probs=84.4

Q ss_pred             EEEEEcCCChHHHHHHHHHH--HcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           65 WALITGATDGIGKAFAHQLA--QHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~--~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +++||||+|.||.+++++|.  ++|++|++++|+... .+.. ++.......++..+..|++++..... .+.+. .+. 
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~-~~~~~~~~~~v~~~~~Dl~~~~~~~~-~~~~~-~l~-   76 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLE-ALAAYWGADRVVPLVGDLTEPGLGLS-EADIA-ELG-   76 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHH-HHHHhcCCCcEEEEecccCCccCCcC-HHHHH-Hhc-
Confidence            58999999999999999999  589999999996532 1111 22222112467888899987632211 11222 233 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       ++|++||+||.....      .+.   ....++|+.|+.++.+++    .+.+..++|++||.+.
T Consensus        77 -~~D~Vih~Aa~~~~~------~~~---~~~~~~nv~gt~~ll~~a----~~~~~~~~v~~SS~~v  128 (657)
T PRK07201         77 -DIDHVVHLAAIYDLT------ADE---EAQRAANVDGTRNVVELA----ERLQAATFHHVSSIAV  128 (657)
T ss_pred             -CCCEEEECceeecCC------CCH---HHHHHHHhHHHHHHHHHH----HhcCCCeEEEEecccc
Confidence             689999999964321      122   346788999988888775    3445578999998753

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.96  E-value=2.8e-09  Score=87.22  Aligned_cols=103  Identities=18%  Similarity=0.253  Sum_probs=70.5

Q ss_pred             EEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCcc
Q 045749           67 LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVG  146 (210)
Q Consensus        67 lITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~id  146 (210)
                      +||||+|.||.+++++|.++|+.|+++.+..                      .+|+++.    +.++++   +...++|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~----------------------~~Dl~~~----~~l~~~---~~~~~~d   51 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK----------------------ELDLTRQ----ADVEAF---FAKEKPT   51 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc----------------------cCCCCCH----HHHHHH---HhccCCC
Confidence            5999999999999999999999877654321                      2466554    223333   3323589


Q ss_pred             EEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          147 VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       147 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      ++||+|+......     ...++....+++|+.++..+.+++.    +.+.+++|++||..
T Consensus        52 ~Vih~A~~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~i~~SS~~  103 (306)
T PLN02725         52 YVILAAAKVGGIH-----ANMTYPADFIRENLQIQTNVIDAAY----RHGVKKLLFLGSSC  103 (306)
T ss_pred             EEEEeeeeecccc-----hhhhCcHHHHHHHhHHHHHHHHHHH----HcCCCeEEEeCcee
Confidence            9999999743211     0112233578899999998888864    34557899999964

>PLN02996 fatty acyl-CoA reductase

Probab=98.94  E-value=1.9e-08  Score=87.99  Aligned_cols=134  Identities=17%  Similarity=0.211  Sum_probs=86.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecChhH---HHHHHHHH---------HhhCC-------CceeEE
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL---NLILVSRNHNK---LEKISNEI---------QAENP-------NTQINI  118 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~---~Vi~~~r~~~~---l~~~~~~l---------~~~~~-------~~~~~~  118 (210)
                      .+||+++||||+|-+|+.++++|++.+.   +|++..|....   .+....++         ++..+       ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            4589999999999999999999998653   57888886431   11211111         11111       156889


Q ss_pred             EEEecccCccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCC
Q 045749          119 VEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKG  198 (210)
Q Consensus       119 ~~~D~~~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g  198 (210)
                      +..|++.+.---...+...+...  ++|++||+|+....      +   ++.+..+++|+.|+.++.+.+...   .+..
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~--~vD~ViH~AA~v~~------~---~~~~~~~~~Nv~gt~~ll~~a~~~---~~~k  154 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK--EIDIVVNLAATTNF------D---ERYDVALGINTLGALNVLNFAKKC---VKVK  154 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh--CCCEEEECccccCC------c---CCHHHHHHHHHHHHHHHHHHHHhc---CCCC
Confidence            99999865321111111222233  48999999987532      1   234568999999999999886531   2345


Q ss_pred             EEEEeccccc
Q 045749          199 AIVNIGSGAA  208 (210)
Q Consensus       199 ~iv~isS~ag  208 (210)
                      ++|++||.+.
T Consensus       155 ~~V~vST~~v  164 (491)
T PLN02996        155 MLLHVSTAYV  164 (491)
T ss_pred             eEEEEeeeEE
Confidence            8999998753

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.88  E-value=1.3e-08  Score=81.40  Aligned_cols=121  Identities=21%  Similarity=0.333  Sum_probs=71.5

Q ss_pred             EEcCCChHHHHHHHHHHHcCC--eEEEEecChhH---HHHHHHHHHhhC--------CCceeEEEEEecccCcc--chhh
Q 045749           68 ITGATDGIGKAFAHQLAQHGL--NLILVSRNHNK---LEKISNEIQAEN--------PNTQINIVEYDFSCDVV--SAGN  132 (210)
Q Consensus        68 ITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~---l~~~~~~l~~~~--------~~~~~~~~~~D~~~~~~--~~~~  132 (210)
                      ||||+|-+|..+.++|++++.  +|++..|..+.   .++..+.+.+..        ...++.++..|++.+.-  .++.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999886  89999997633   233322222110        15689999999998642  1122


Q ss_pred             HHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          133 IKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       133 ~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      ++.+.+     ++|++||||+......      +   +++..++|+.|+.++.+.+.    +.+..+++++||.
T Consensus        81 ~~~L~~-----~v~~IiH~Aa~v~~~~------~---~~~~~~~NV~gt~~ll~la~----~~~~~~~~~iSTa  136 (249)
T PF07993_consen   81 YQELAE-----EVDVIIHCAASVNFNA------P---YSELRAVNVDGTRNLLRLAA----QGKRKRFHYISTA  136 (249)
T ss_dssp             HHHHHH-----H--EEEE--SS-SBS-------S-----EEHHHHHHHHHHHHHHHT----SSS---EEEEEEG
T ss_pred             hhcccc-----ccceeeecchhhhhcc------c---chhhhhhHHHHHHHHHHHHH----hccCcceEEeccc
Confidence            233322     4889999998764421      2   23478899999999998864    2233489999993

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.88  E-value=8.3e-09  Score=87.64  Aligned_cols=81  Identities=25%  Similarity=0.364  Sum_probs=57.9

Q ss_pred             cCCcEEEEEcC---------------CCh-HHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecc
Q 045749           61 SYGSWALITGA---------------TDG-IGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS  124 (210)
Q Consensus        61 ~~gk~vlITGa---------------ssG-iG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~  124 (210)
                      +.||+++||||               ||| +|+++|++|+++|++|++++++.+ ++         .+. .  ...+|++
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~~~-~--~~~~dv~  252 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------TPA-G--VKRIDVE  252 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------CCC-C--cEEEccC
Confidence            56999999999               555 999999999999999999998752 11         011 1  2345666


Q ss_pred             cCccchhhHHHHHHHhcCCCccEEEEcCCCCCCCc
Q 045749          125 CDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKA  159 (210)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~  159 (210)
                      +..   +..+.+.+.++  ++|++|||||+....+
T Consensus       253 ~~~---~~~~~v~~~~~--~~DilI~~Aav~d~~~  282 (399)
T PRK05579        253 SAQ---EMLDAVLAALP--QADIFIMAAAVADYRP  282 (399)
T ss_pred             CHH---HHHHHHHHhcC--CCCEEEEccccccccc
Confidence            542   33344555555  6999999999876544

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.87  E-value=6.4e-08  Score=86.11  Aligned_cols=129  Identities=19%  Similarity=0.255  Sum_probs=87.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecChhH---HHHHHHH---------HHhhCC-------CceeEEE
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL---NLILVSRNHNK---LEKISNE---------IQAENP-------NTQINIV  119 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~---~Vi~~~r~~~~---l~~~~~~---------l~~~~~-------~~~~~~~  119 (210)
                      +||+++||||+|-+|+.++++|++.+.   +|++..|....   .+...++         +++..+       ..++..+
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            589999999999999999999998764   57888885422   2222222         222222       2468889


Q ss_pred             EEecccCcc-c-hhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCC
Q 045749          120 EYDFSCDVV-S-AGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK  197 (210)
Q Consensus       120 ~~D~~~~~~-~-~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~  197 (210)
                      ..|++++.- . ++..+.+.   .  ++|++||+|+....      +   ++.+..+++|+.|+.++.+.+...   .+.
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~---~--~vDiVIH~AA~v~f------~---~~~~~a~~vNV~GT~nLLelA~~~---~~l  260 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIA---K--EVDVIINSAANTTF------D---ERYDVAIDINTRGPCHLMSFAKKC---KKL  260 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHH---h--cCCEEEECcccccc------c---cCHHHHHHHHHHHHHHHHHHHHHc---CCC
Confidence            999987631 1 12122222   2  48999999987532      1   235678999999999999886531   223


Q ss_pred             CEEEEecccc
Q 045749          198 GAIVNIGSGA  207 (210)
Q Consensus       198 g~iv~isS~a  207 (210)
                      .++|++||..
T Consensus       261 k~fV~vSTay  270 (605)
T PLN02503        261 KLFLQVSTAY  270 (605)
T ss_pred             CeEEEccCce
Confidence            5799999864

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.87  E-value=2.6e-08  Score=80.84  Aligned_cols=98  Identities=20%  Similarity=0.258  Sum_probs=66.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCc
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEV  145 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~i  145 (210)
                      ++||||+|.||.+++++|+++|++|++++|+.++.....        ...    ..|...        ....+.+.  ++
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~----~~~~~~--------~~~~~~~~--~~   58 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------WEG----YKPWAP--------LAESEALE--GA   58 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------cee----eecccc--------cchhhhcC--CC
Confidence            589999999999999999999999999999876532210        000    011111        11122333  58


Q ss_pred             cEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHH
Q 045749          146 GVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVL  189 (210)
Q Consensus       146 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l  189 (210)
                      |++||+||.....    .+.+.+..+..+++|+.++..+.+++.
T Consensus        59 D~Vvh~a~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~   98 (292)
T TIGR01777        59 DAVINLAGEPIAD----KRWTEERKQEIRDSRIDTTRALVEAIA   98 (292)
T ss_pred             CEEEECCCCCccc----ccCCHHHHHHHHhcccHHHHHHHHHHH
Confidence            9999999964321    123455566788999999888887754

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.87  E-value=6.2e-09  Score=85.00  Aligned_cols=101  Identities=25%  Similarity=0.362  Sum_probs=69.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+|-+|.++.++|.++|+.|+.++|+                       ..|+.+.    +.+.++.+..   +
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~----~~~~~~~~~~---~   51 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDP----EAVAKLLEAF---K   51 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSH----HHHHHHHHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCH----HHHHHHHHHh---C
Confidence            58999999999999999999999999999876                       1345443    3344444444   4


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      +|++||+||....      +.-+++-+..+.+|+.++..+.+.+..     .+.++|++||.
T Consensus        52 pd~Vin~aa~~~~------~~ce~~p~~a~~iN~~~~~~la~~~~~-----~~~~li~~STd  102 (286)
T PF04321_consen   52 PDVVINCAAYTNV------DACEKNPEEAYAINVDATKNLAEACKE-----RGARLIHISTD  102 (286)
T ss_dssp             -SEEEE------H------HHHHHSHHHHHHHHTHHHHHHHHHHHH-----CT-EEEEEEEG
T ss_pred             CCeEeccceeecH------HhhhhChhhhHHHhhHHHHHHHHHHHH-----cCCcEEEeecc
Confidence            8999999997543      223344567899999999999998653     34799999985

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.85  E-value=2.2e-08  Score=80.27  Aligned_cols=122  Identities=12%  Similarity=0.143  Sum_probs=85.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCh--hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL--NLILVSRNH--NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.+|||||++-||.++++++.++..  +|+.+|.=.  ...+.+ +.+.   .+.+..+++.|+.|.    +.+.++.++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~~---~~~~~~fv~~DI~D~----~~v~~~~~~   72 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADVE---DSPRYRFVQGDICDR----ELVDRLFKE   72 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhhh---cCCCceEEeccccCH----HHHHHHHHh
Confidence            3689999999999999999998765  367766521  112222 2222   256889999999876    444444444


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS  205 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS  205 (210)
                      .   ++|+++|-|+=++.      |-+.++-+..+++|+.|++.+.+++..+..+   -+++.+|.
T Consensus        73 ~---~~D~VvhfAAESHV------DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HIST  126 (340)
T COG1088          73 Y---QPDAVVHFAAESHV------DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHIST  126 (340)
T ss_pred             c---CCCeEEEechhccc------cccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEecc
Confidence            3   59999999986553      3355556678999999999999998775422   36777764

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.82  E-value=3.8e-08  Score=80.45  Aligned_cols=84  Identities=20%  Similarity=0.326  Sum_probs=60.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCh---hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNH---NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~---~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ..+|+++|+|| ||+|++++..|++.|++ |++++|+.   ++++++.+++.+.++  ......+|+++.       +.+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~--~~~~~~~d~~~~-------~~~  193 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP--ECIVNVYDLNDT-------EKL  193 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC--CceeEEechhhh-------hHH
Confidence            45899999999 69999999999999997 99999997   677777777755432  333445565433       223


Q ss_pred             HHHhcCCCccEEEEcCCCCC
Q 045749          137 EMAIDGLEVGVLINNVGITY  156 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~  156 (210)
                      .+...  ..|++|||..+..
T Consensus       194 ~~~~~--~~DilINaTp~Gm  211 (289)
T PRK12548        194 KAEIA--SSDILVNATLVGM  211 (289)
T ss_pred             Hhhhc--cCCEEEEeCCCCC
Confidence            33333  4689999986553

>PRK12320 hypothetical protein; Provisional

Probab=98.80  E-value=7e-08  Score=86.99  Aligned_cols=104  Identities=16%  Similarity=0.229  Sum_probs=74.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+|.||.+++++|.++|++|++++|+....         .  ...+.++.+|+.+.    .    +.+.+.  +
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~--~~~ve~v~~Dl~d~----~----l~~al~--~   60 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------L--DPRVDYVCASLRNP----V----LQELAG--E   60 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------c--cCCceEEEccCCCH----H----HHHHhc--C
Confidence            589999999999999999999999999999875321         0  23466778887655    1    222333  4


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +|++||.|+....        .      ..++|+.|+.++.+++.    +.+ .++|++||..|
T Consensus        61 ~D~VIHLAa~~~~--------~------~~~vNv~Gt~nLleAA~----~~G-vRiV~~SS~~G  105 (699)
T PRK12320         61 ADAVIHLAPVDTS--------A------PGGVGITGLAHVANAAA----RAG-ARLLFVSQAAG  105 (699)
T ss_pred             CCEEEEcCccCcc--------c------hhhHHHHHHHHHHHHHH----HcC-CeEEEEECCCC
Confidence            8999999985311        1      11478999988888753    344 48999998754

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=98.80  E-value=3.9e-08  Score=81.84  Aligned_cols=124  Identities=18%  Similarity=0.246  Sum_probs=85.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+++||||+|-+|++++++|.++|  ..+.+.|..+..-. ..++.... ....+..+.+|+.+.       ..+...
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~-~~~e~~~~-~~~~v~~~~~D~~~~-------~~i~~a   73 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSN-LPAELTGF-RSGRVTVILGDLLDA-------NSISNA   73 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccc-cchhhhcc-cCCceeEEecchhhh-------hhhhhh
Confidence            36799999999999999999999998  67888888764211 11111110 155677777887666       345445


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +.  .. .+||+|....+.      .-..+-+..+++|+.|+-++...+    ++.+..++|++||..
T Consensus        74 ~~--~~-~Vvh~aa~~~~~------~~~~~~~~~~~vNV~gT~nvi~~c----~~~~v~~lIYtSs~~  128 (361)
T KOG1430|consen   74 FQ--GA-VVVHCAASPVPD------FVENDRDLAMRVNVNGTLNVIEAC----KELGVKRLIYTSSAY  128 (361)
T ss_pred             cc--Cc-eEEEeccccCcc------ccccchhhheeecchhHHHHHHHH----HHhCCCEEEEecCce
Confidence            54  34 677777654432      223356679999999987777764    556778999999974

>PLN02778 3,5-epimerase/4-reductase

Probab=98.79  E-value=1.2e-07  Score=77.95  Aligned_cols=92  Identities=21%  Similarity=0.251  Sum_probs=62.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .++++||||+|-||..++++|.++|++|+...++                          +.+.    +   .+...+..
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~--------------------------~~~~----~---~v~~~l~~   55 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGR--------------------------LENR----A---SLEADIDA   55 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCc--------------------------cCCH----H---HHHHHHHh
Confidence            4679999999999999999999999998753221                          1111    1   11112222


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHH
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLT  190 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~  190 (210)
                      .++|++||+||......   .+...++-.+.+++|+.|+.++.+++..
T Consensus        56 ~~~D~ViH~Aa~~~~~~---~~~~~~~p~~~~~~Nv~gt~~ll~aa~~  100 (298)
T PLN02778         56 VKPTHVFNAAGVTGRPN---VDWCESHKVETIRANVVGTLTLADVCRE  100 (298)
T ss_pred             cCCCEEEECCcccCCCC---chhhhhCHHHHHHHHHHHHHHHHHHHHH
Confidence            25899999999764311   0112234457899999999999998753

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.78  E-value=5.8e-08  Score=76.73  Aligned_cols=100  Identities=21%  Similarity=0.261  Sum_probs=67.6

Q ss_pred             cEEEEEcCCCh-HHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDG-IGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassG-iG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .+-.||+.|+| +|.++|++|+++|++|++++|+...        .. .+...+.++.++     +..+..+.+.+..+ 
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~--------~~-~~~~~v~~i~v~-----s~~~m~~~l~~~~~-   80 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV--------KP-EPHPNLSIIEIE-----NVDDLLETLEPLVK-   80 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc--------cC-CCCCCeEEEEEe-----cHHHHHHHHHHHhc-
Confidence            36678887776 9999999999999999999876421        00 011233444332     22333345555555 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHH
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT  181 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~  181 (210)
                       ++|++|||||+....+  ....+.+++.+++++|....
T Consensus        81 -~~DivIh~AAvsd~~~--~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         81 -DHDVLIHSMAVSDYTP--VYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             -CCCEEEeCCccCCcee--hhhhhhhhhhhhhhhhhhhc
Confidence             5899999999976433  45678899999999986553

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.73  E-value=8.9e-08  Score=77.16  Aligned_cols=99  Identities=22%  Similarity=0.270  Sum_probs=74.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCc
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEV  145 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~i  145 (210)
                      ++|||++|-+|.++++.+. .+..|+.++|.+                       +|+++++.    +.++.   .+.++
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~----v~~~i---~~~~P   51 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDA----VLEVI---RETRP   51 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHH----HHHHH---HhhCC
Confidence            8999999999999999999 778999988853                       56777732    22332   22368


Q ss_pred             cEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          146 GVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       146 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      |++||+|+....      |.-+.+-+..+.+|..|+.++.+++-.     -+..+|.+|+-
T Consensus        52 DvVIn~AAyt~v------D~aE~~~e~A~~vNa~~~~~lA~aa~~-----~ga~lVhiSTD  101 (281)
T COG1091          52 DVVINAAAYTAV------DKAESEPELAFAVNATGAENLARAAAE-----VGARLVHISTD  101 (281)
T ss_pred             CEEEECcccccc------ccccCCHHHHHHhHHHHHHHHHHHHHH-----hCCeEEEeecc
Confidence            999999997644      223344567999999999999999753     24678888863

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.71  E-value=4.1e-08  Score=83.16  Aligned_cols=82  Identities=18%  Similarity=0.253  Sum_probs=56.6

Q ss_pred             cCCcEEEEEcC---------------CCh-HHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecc
Q 045749           61 SYGSWALITGA---------------TDG-IGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS  124 (210)
Q Consensus        61 ~~gk~vlITGa---------------ssG-iG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~  124 (210)
                      +.||+++||||               ||| +|.++|++++.+|++|++++++....          . ...+  ...|++
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~~~--~~~~v~  249 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PPGV--KSIKVS  249 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CCCc--EEEEec
Confidence            56999999999               677 99999999999999999988765321          1 1111  345665


Q ss_pred             cCccchhhHHHHHHHhcCCCccEEEEcCCCCCCCc
Q 045749          125 CDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKA  159 (210)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~  159 (210)
                      +..+.   .+.+.+...+ ++|++|||||+....+
T Consensus       250 ~~~~~---~~~~~~~~~~-~~D~~i~~Aavsd~~~  280 (390)
T TIGR00521       250 TAEEM---LEAALNELAK-DFDIFISAAAVADFKP  280 (390)
T ss_pred             cHHHH---HHHHHHhhcc-cCCEEEEccccccccc
Confidence            54222   2334322221 6899999999986644

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.66  E-value=3.5e-07  Score=70.45  Aligned_cols=84  Identities=24%  Similarity=0.304  Sum_probs=60.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++++++++|+||++++|+.+++.|+++|++|++++|+.+++++..+++.+.. +.  ....+|..+.       +.+.+.
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~--~~~~~~~~~~-------~~~~~~   94 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GE--GVGAVETSDD-------AARAAA   94 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CC--cEEEeeCCCH-------HHHHHH
Confidence            4568999999999999999999999999999999999998888887775432 22  2333444432       223333


Q ss_pred             hcCCCccEEEEcCCCC
Q 045749          140 IDGLEVGVLINNVGIT  155 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~  155 (210)
                      +.  +.|++|++....
T Consensus        95 ~~--~~diVi~at~~g  108 (194)
T cd01078          95 IK--GADVVFAAGAAG  108 (194)
T ss_pred             Hh--cCCEEEECCCCC
Confidence            33  467888766543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.62  E-value=1.4e-07  Score=76.66  Aligned_cols=105  Identities=10%  Similarity=0.084  Sum_probs=68.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC-
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE-  144 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~-  144 (210)
                      ++||||+|.+|+.++++|.++|++|.+..|++++.+           ...+..+.+|+.|+.+..+.++.. +.+.  . 
T Consensus         2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~--g~   67 (285)
T TIGR03649         2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSD-DGME--PE   67 (285)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhcc-cCcC--Cc
Confidence            799999999999999999999999999999976432           112344567887664333322111 1112  3 


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +|.++++++...       + ..+               ..+.++..+++.+-.+||++||..
T Consensus        68 ~d~v~~~~~~~~-------~-~~~---------------~~~~~i~aa~~~gv~~~V~~Ss~~  107 (285)
T TIGR03649        68 ISAVYLVAPPIP-------D-LAP---------------PMIKFIDFARSKGVRRFVLLSASI  107 (285)
T ss_pred             eeEEEEeCCCCC-------C-hhH---------------HHHHHHHHHHHcCCCEEEEeeccc
Confidence            889988876321       0 001               113445556677778999999854

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN00016 RNA-binding protein; Provisional

Probab=98.56  E-value=8.8e-07  Score=75.09  Aligned_cols=106  Identities=21%  Similarity=0.201  Sum_probs=70.0

Q ss_pred             CCcEEEEE----cCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH-------HHHHhhCCCceeEEEEEecccCccch
Q 045749           62 YGSWALIT----GATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS-------NEIQAENPNTQINIVEYDFSCDVVSA  130 (210)
Q Consensus        62 ~gk~vlIT----GassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~-------~~l~~~~~~~~~~~~~~D~~~~~~~~  130 (210)
                      ..+.++||    ||+|.||..++++|.++|++|++++|+.+......       .++.    ...+..+..|+.+     
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~v~~v~~D~~d-----  121 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS----SAGVKTVWGDPAD-----  121 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh----hcCceEEEecHHH-----
Confidence            35789999    99999999999999999999999999875432211       1121    1235667777654     


Q ss_pred             hhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          131 GNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       131 ~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                        ++.+.   ....+|++|+++|.           +.+               .++.++..+++.+-.++|++||..
T Consensus       122 --~~~~~---~~~~~d~Vi~~~~~-----------~~~---------------~~~~ll~aa~~~gvkr~V~~SS~~  167 (378)
T PLN00016        122 --VKSKV---AGAGFDVVYDNNGK-----------DLD---------------EVEPVADWAKSPGLKQFLFCSSAG  167 (378)
T ss_pred             --HHhhh---ccCCccEEEeCCCC-----------CHH---------------HHHHHHHHHHHcCCCEEEEEccHh
Confidence              12222   11258899998752           111               123344445556667999999974

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.47  E-value=3.6e-06  Score=69.96  Aligned_cols=127  Identities=17%  Similarity=0.257  Sum_probs=84.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChh---HHHHHHHHHH-----hhCCCceeEEEEEecccCccchhhHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHN---KLEKISNEIQ-----AENPNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~---~l~~~~~~l~-----~~~~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      +++++|||+|-+|..+..+|..+ -++|++.-|-++   ..+++.+.+.     +..-..++..+..|++.+.---+. .
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~-~   79 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSE-R   79 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCH-H
Confidence            47999999999999999888754 569998877433   2333333333     111257889999999855322221 2


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCC-EEEEecccc
Q 045749          135 AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKG-AIVNIGSGA  207 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g-~iv~isS~a  207 (210)
                      +..+-.+  .+|.++|||+..+.-         ..+.+....|+.|+..+.|.+.     ++++ .+.++||++
T Consensus        80 ~~~~La~--~vD~I~H~gA~Vn~v---------~pYs~L~~~NVlGT~evlrLa~-----~gk~Kp~~yVSsis  137 (382)
T COG3320          80 TWQELAE--NVDLIIHNAALVNHV---------FPYSELRGANVLGTAEVLRLAA-----TGKPKPLHYVSSIS  137 (382)
T ss_pred             HHHHHhh--hcceEEecchhhccc---------CcHHHhcCcchHhHHHHHHHHh-----cCCCceeEEEeeee
Confidence            2222222  489999999876531         1234678899999998888764     3334 489999875

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.45  E-value=5.6e-06  Score=80.90  Aligned_cols=130  Identities=18%  Similarity=0.143  Sum_probs=84.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC----CeEEEEecChhHH---HHHHHHHHhhC-----CCceeEEEEEecccCccch
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHG----LNLILVSRNHNKL---EKISNEIQAEN-----PNTQINIVEYDFSCDVVSA  130 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G----~~Vi~~~r~~~~l---~~~~~~l~~~~-----~~~~~~~~~~D~~~~~~~~  130 (210)
                      .++++||||+|.+|..++++|.++|    .+|++..|+....   +...+......     ...++.++..|++++....
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999887    7888888875432   22222221110     0136788889988663211


Q ss_pred             hhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          131 GNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       131 ~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      . .+...+...  .+|++||||+....      ..+.   +...+.|+.|+.++.+.+..    .+..+++++||.+.
T Consensus      1051 ~-~~~~~~l~~--~~d~iiH~Aa~~~~------~~~~---~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS~~v 1112 (1389)
T TIGR03443      1051 S-DEKWSDLTN--EVDVIIHNGALVHW------VYPY---SKLRDANVIGTINVLNLCAE----GKAKQFSFVSSTSA 1112 (1389)
T ss_pred             C-HHHHHHHHh--cCCEEEECCcEecC------ccCH---HHHHHhHHHHHHHHHHHHHh----CCCceEEEEeCeee
Confidence            1 112222222  58899999986532      1122   33456799999999887642    34458999999753

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.44  E-value=2.1e-06  Score=62.31  Aligned_cols=78  Identities=26%  Similarity=0.414  Sum_probs=57.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++++.++|.|+ ||.|+++++.|++.|++ |+++.|+.++++++.+++.    +..+.+..  +.+          +.+
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~----~~~~~~~~--~~~----------~~~   71 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG----GVNIEAIP--LED----------LEE   71 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT----GCSEEEEE--GGG----------HCH
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC----ccccceee--HHH----------HHH
Confidence            466999999998 99999999999999998 9999999999998888772    22333322  221          112


Q ss_pred             HhcCCCccEEEEcCCCCC
Q 045749          139 AIDGLEVGVLINNVGITY  156 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~  156 (210)
                      ...  +.|++||+.+...
T Consensus        72 ~~~--~~DivI~aT~~~~   87 (135)
T PF01488_consen   72 ALQ--EADIVINATPSGM   87 (135)
T ss_dssp             HHH--TESEEEE-SSTTS
T ss_pred             HHh--hCCeEEEecCCCC
Confidence            333  4889999987653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.41  E-value=2.5e-06  Score=77.55  Aligned_cols=103  Identities=18%  Similarity=0.188  Sum_probs=68.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      ..+++||||+|-||.+++++|.++|++|....                          .|+++.    +.+...   +..
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~--------------------------~~l~d~----~~v~~~---i~~  426 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGK--------------------------GRLEDR----SSLLAD---IRN  426 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEeec--------------------------cccccH----HHHHHH---HHh
Confidence            35799999999999999999999998873210                          123332    222222   222


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      .++|++||+|+......   .+..+++-+..+++|+.|+.++.+++..    .+ .+.+++||.
T Consensus       427 ~~pd~Vih~Aa~~~~~~---~~~~~~~~~~~~~~N~~gt~~l~~a~~~----~g-~~~v~~Ss~  482 (668)
T PLN02260        427 VKPTHVFNAAGVTGRPN---VDWCESHKVETIRANVVGTLTLADVCRE----NG-LLMMNFATG  482 (668)
T ss_pred             hCCCEEEECCcccCCCC---CChHHhCHHHHHHHHhHHHHHHHHHHHH----cC-CeEEEEccc
Confidence            25899999999764311   1223445567899999999999999754    23 345666553

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.37  E-value=5.7e-06  Score=66.04  Aligned_cols=112  Identities=21%  Similarity=0.275  Sum_probs=69.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCc
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEV  145 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~i  145 (210)
                      ++||||++-||++++.+|.+.|+.|+++.|+..+.+...        ...       +.       ..+.+.+... .++
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~--------~~~-------v~-------~~~~~~~~~~-~~~   57 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL--------HPN-------VT-------LWEGLADALT-LGI   57 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc--------Ccc-------cc-------ccchhhhccc-CCC
Confidence            589999999999999999999999999999987643211        000       00       1122222222 159


Q ss_pred             cEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEeccccc
Q 045749          146 GVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAA  208 (210)
Q Consensus       146 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag  208 (210)
                      |++||-||-.-...    ..+++.=+..++    |-+..++.+.....+.+ +.++..-+|..|
T Consensus        58 DavINLAG~~I~~r----rWt~~~K~~i~~----SRi~~T~~L~e~I~~~~~~P~~~isaSAvG  113 (297)
T COG1090          58 DAVINLAGEPIAER----RWTEKQKEEIRQ----SRINTTEKLVELIAASETKPKVLISASAVG  113 (297)
T ss_pred             CEEEECCCCccccc----cCCHHHHHHHHH----HHhHHHHHHHHHHHhccCCCcEEEecceEE
Confidence            99999999754322    346665555655    44555666665554332 344444444444

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.35  E-value=1.1e-05  Score=69.32  Aligned_cols=132  Identities=17%  Similarity=0.254  Sum_probs=85.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecCh---h---HH-----HHHHHHHHhhCCC--ceeEEEEEecc
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL---NLILVSRNH---N---KL-----EKISNEIQAENPN--TQINIVEYDFS  124 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~---~Vi~~~r~~---~---~l-----~~~~~~l~~~~~~--~~~~~~~~D~~  124 (210)
                      ++||+++||||+|.+|+-+.+++.+.-.   ++.+.-|..   +   ++     +++-+.+++..|.  .++..+..|.+
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            4599999999999999999999987532   566665542   1   11     2233344444443  56777778887


Q ss_pred             cCccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEec
Q 045749          125 CDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIG  204 (210)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~is  204 (210)
                      .+..--.. ........  .+|++||+|+....         .|..+....+|.+|+.++.+.+.... +  -...+.+|
T Consensus        90 ~~~LGis~-~D~~~l~~--eV~ivih~AAtvrF---------de~l~~al~iNt~Gt~~~l~lak~~~-~--l~~~vhVS  154 (467)
T KOG1221|consen   90 EPDLGISE-SDLRTLAD--EVNIVIHSAATVRF---------DEPLDVALGINTRGTRNVLQLAKEMV-K--LKALVHVS  154 (467)
T ss_pred             CcccCCCh-HHHHHHHh--cCCEEEEeeeeecc---------chhhhhhhhhhhHhHHHHHHHHHHhh-h--hheEEEee
Confidence            76433221 12222222  68999999986533         24456789999999999999877633 2  23567776


Q ss_pred             ccc
Q 045749          205 SGA  207 (210)
Q Consensus       205 S~a  207 (210)
                      +..
T Consensus       155 TAy  157 (467)
T KOG1221|consen  155 TAY  157 (467)
T ss_pred             hhh
Confidence            653

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.21  E-value=9.4e-06  Score=68.46  Aligned_cols=76  Identities=26%  Similarity=0.399  Sum_probs=59.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +.++|.|| |++|+.+|+.|+++| .+|++.||+.++.+++.+..     ..++.+.++|+.+.       +++.+.+.+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~-------~al~~li~~   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADV-------DALVALIKD   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccCh-------HHHHHHHhc
Confidence            46888888 999999999999999 89999999998887765543     33788888988776       344444543


Q ss_pred             CCccEEEEcCCC
Q 045749          143 LEVGVLINNVGI  154 (210)
Q Consensus       143 ~~id~lvnnAg~  154 (210)
                        .|++||++..
T Consensus        69 --~d~VIn~~p~   78 (389)
T COG1748          69 --FDLVINAAPP   78 (389)
T ss_pred             --CCEEEEeCCc
Confidence              4799998864

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.20  E-value=9.6e-06  Score=70.30  Aligned_cols=76  Identities=22%  Similarity=0.337  Sum_probs=54.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~-~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++|+++|+|+++ +|.++|+.|+++|++|++++++. +.+++..+++.+.    ...++..|..+            +.
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~------------~~   65 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPE------------EF   65 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcch------------hH
Confidence            4589999999877 99999999999999999999985 4455544555432    23344444432            11


Q ss_pred             hcCCCccEEEEcCCCC
Q 045749          140 IDGLEVGVLINNVGIT  155 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~  155 (210)
                      .+  +.|++|+++|..
T Consensus        66 ~~--~~d~vv~~~g~~   79 (450)
T PRK14106         66 LE--GVDLVVVSPGVP   79 (450)
T ss_pred             hh--cCCEEEECCCCC
Confidence            22  588999999974

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.18  E-value=4.4e-06  Score=66.87  Aligned_cols=129  Identities=18%  Similarity=0.161  Sum_probs=88.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh--CCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAE--NPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +|++||||=++-=|.-+|+.|.++|+.|.-+.|.........-.+.+.  ..+.++..+..|++|..+..    ++.+..
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~----r~l~~v   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLL----RILEEV   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHH----HHHHhc
Confidence            689999999999999999999999999999888643322111022211  12456888899999883322    233333


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                         ++|-+.|-|+.++..      .+.|.-..+.+++..|+.++..+..-  ...++-++..-||.
T Consensus        78 ---~PdEIYNLaAQS~V~------vSFe~P~~T~~~~~iGtlrlLEaiR~--~~~~~~rfYQAStS  132 (345)
T COG1089          78 ---QPDEIYNLAAQSHVG------VSFEQPEYTADVDAIGTLRLLEAIRI--LGEKKTRFYQASTS  132 (345)
T ss_pred             ---Cchhheecccccccc------ccccCcceeeeechhHHHHHHHHHHH--hCCcccEEEecccH
Confidence               578889988876543      34555567899999999999988643  22334566665553

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.12  E-value=1.9e-05  Score=65.77  Aligned_cols=48  Identities=29%  Similarity=0.488  Sum_probs=40.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHc-C-CeEEEEecChhHHHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQH-G-LNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~-G-~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      ++.+|+++||||+|.||..+|++|+++ | .++++++|+++++++..+++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el  201 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL  201 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            466999999999999999999999864 5 48999999988887766654

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.10  E-value=1.5e-05  Score=63.89  Aligned_cols=118  Identities=15%  Similarity=0.175  Sum_probs=78.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ..+++++||||++-||..++++|..+|..|+++|.-..+-.+....+   ....++..+..|+..+         +..  
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~---~~~~~fel~~hdv~~p---------l~~--   90 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHW---IGHPNFELIRHDVVEP---------LLK--   90 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchh---ccCcceeEEEeechhH---------HHH--
Confidence            35789999999999999999999999999999987544332222222   1234555555555433         222  


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                         .+|-++|-|....+..  +..-+    -+++.+|+.++.++...+-     +-+.|++..|+.
T Consensus        91 ---evD~IyhLAapasp~~--y~~np----vktIktN~igtln~lglak-----rv~aR~l~aSTs  142 (350)
T KOG1429|consen   91 ---EVDQIYHLAAPASPPH--YKYNP----VKTIKTNVIGTLNMLGLAK-----RVGARFLLASTS  142 (350)
T ss_pred             ---HhhhhhhhccCCCCcc--cccCc----cceeeecchhhHHHHHHHH-----HhCceEEEeecc
Confidence               3667888887765522  21111    2478899999998887753     334778877764

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.07  E-value=2.2e-05  Score=66.80  Aligned_cols=76  Identities=25%  Similarity=0.421  Sum_probs=55.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+|-|| |.+|+.+++.|++++-  +|++.+|+.+++++..+++    ...++...++|+.+.       +++.+...  
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~-------~~l~~~~~--   66 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDP-------ESLAELLR--   66 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTH-------HHHHHHHT--
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCH-------HHHHHHHh--
Confidence            688999 9999999999999874  7999999999988877665    256888899998766       34555555  


Q ss_pred             CccEEEEcCCCC
Q 045749          144 EVGVLINNVGIT  155 (210)
Q Consensus       144 ~id~lvnnAg~~  155 (210)
                      +.|++||++|..
T Consensus        67 ~~dvVin~~gp~   78 (386)
T PF03435_consen   67 GCDVVINCAGPF   78 (386)
T ss_dssp             TSSEEEE-SSGG
T ss_pred             cCCEEEECCccc
Confidence            358999999854

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK09620 hypothetical protein; Provisional

Probab=98.05  E-value=2.2e-05  Score=61.98  Aligned_cols=85  Identities=19%  Similarity=0.188  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCC----------------ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEeccc
Q 045749           62 YGSWALITGAT----------------DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC  125 (210)
Q Consensus        62 ~gk~vlITGas----------------sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~  125 (210)
                      .||.|+||+|.                |-+|.++|++|.++|++|+++++.......       .. ........  +..
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~-------~~-~~~~~~~~--V~s   71 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN-------DI-NNQLELHP--FEG   71 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc-------cc-CCceeEEE--Eec
Confidence            58999999886                889999999999999999998864221000       00 01122222  111


Q ss_pred             CccchhhHHHHHHHhcCCCccEEEEcCCCCCCCc
Q 045749          126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKA  159 (210)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~  159 (210)
                      +   .+..+.+.+.+...++|++||+|++....+
T Consensus        72 ~---~d~~~~l~~~~~~~~~D~VIH~AAvsD~~~  102 (229)
T PRK09620         72 I---IDLQDKMKSIITHEKVDAVIMAAAGSDWVV  102 (229)
T ss_pred             H---HHHHHHHHHHhcccCCCEEEECccccceec
Confidence            1   111234444454336899999999976654

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.04  E-value=6.2e-05  Score=62.38  Aligned_cols=117  Identities=16%  Similarity=0.150  Sum_probs=73.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+.+.|||++|.+|..++..++.+|  ..++++|++  ..+....++.+..+  .  ....+.+++.       ...+..
T Consensus         8 ~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~--~--~~v~~~td~~-------~~~~~l   74 (321)
T PTZ00325          8 MFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDT--P--AKVTGYADGE-------LWEKAL   74 (321)
T ss_pred             CCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCc--C--ceEEEecCCC-------chHHHh
Confidence            5588999999999999999999655  579999993  22222334443221  1  1223444431       112334


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      .  +.|++|++||.... +    .   +.+.+.++.|+...-    ...+.|.+.+..++|.++|-
T Consensus        75 ~--gaDvVVitaG~~~~-~----~---~tR~dll~~N~~i~~----~i~~~i~~~~~~~iviv~SN  126 (321)
T PTZ00325         75 R--GADLVLICAGVPRK-P----G---MTRDDLFNTNAPIVR----DLVAAVASSAPKAIVGIVSN  126 (321)
T ss_pred             C--CCCEEEECCCCCCC-C----C---CCHHHHHHHHHHHHH----HHHHHHHHHCCCeEEEEecC
Confidence            4  58899999997432 1    1   234567888876654    44555666676778777763

>PLN00106 malate dehydrogenase

Probab=97.99  E-value=6.6e-05  Score=62.27  Aligned_cols=116  Identities=19%  Similarity=0.225  Sum_probs=71.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+++.|||+++.+|..++..++.+|.  .++++|+++  .+....++.+..+  ..  ...+++++.       ...+.+
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~--~~--~i~~~~~~~-------d~~~~l   84 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINT--PA--QVRGFLGDD-------QLGDAL   84 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCc--Cc--eEEEEeCCC-------CHHHHc
Confidence            46899999999999999999997664  699999987  2222224433211  11  122333221       133344


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS  205 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS  205 (210)
                      .  +.|++|+.||.... +    .   +.+++.+..|+.....+    .+.+.+.+..+++.++|
T Consensus        85 ~--~aDiVVitAG~~~~-~----g---~~R~dll~~N~~i~~~i----~~~i~~~~p~aivivvS  135 (323)
T PLN00106         85 K--GADLVIIPAGVPRK-P----G---MTRDDLFNINAGIVKTL----CEAVAKHCPNALVNIIS  135 (323)
T ss_pred             C--CCCEEEEeCCCCCC-C----C---CCHHHHHHHHHHHHHHH----HHHHHHHCCCeEEEEeC
Confidence            4  58899999997533 1    1   23556788887765444    44455555555655554

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.99  E-value=7.9e-05  Score=60.65  Aligned_cols=48  Identities=25%  Similarity=0.381  Sum_probs=42.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQ  108 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~  108 (210)
                      ...+|.++|+|+ ||+|+++++.|+..| .+|++++|+.++.+++.+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            456899999997 899999999999999 689999999998888877664

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.94  E-value=0.00011  Score=62.42  Aligned_cols=128  Identities=21%  Similarity=0.284  Sum_probs=78.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+...|+|+||+|+.|+.++++|.++|+.|...-|+.++.++... +  .........+..|.....   +....+.+..
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~--~~~d~~~~~v~~~~~~~~---d~~~~~~~~~  150 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-V--FFVDLGLQNVEADVVTAI---DILKKLVEAV  150 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-c--cccccccceeeecccccc---chhhhhhhhc
Confidence            345799999999999999999999999999999999888776544 1  111222222233332221   1122333333


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .. ..++++-++|.-...     +    |...-..+.+.|..++++++    +..+-.|++.+||+.+
T Consensus       151 ~~-~~~~v~~~~ggrp~~-----e----d~~~p~~VD~~g~knlvdA~----~~aGvk~~vlv~si~~  204 (411)
T KOG1203|consen  151 PK-GVVIVIKGAGGRPEE-----E----DIVTPEKVDYEGTKNLVDAC----KKAGVKRVVLVGSIGG  204 (411)
T ss_pred             cc-cceeEEecccCCCCc-----c----cCCCcceecHHHHHHHHHHH----HHhCCceEEEEEeecC
Confidence            21 245667666643221     1    22223346677777788886    3345668999988754

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.94  E-value=0.00023  Score=58.58  Aligned_cols=79  Identities=22%  Similarity=0.334  Sum_probs=54.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+++++|+|+++++|.++++.+...|++|+++++++++.+.+.    ..  +..   ...|..+    ....+.+.+...
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~--~~~---~~~~~~~----~~~~~~~~~~~~  232 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK----EL--GAD---YVIDYRK----EDFVREVRELTG  232 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc--CCC---eEEecCC----hHHHHHHHHHhC
Confidence            3789999999999999999999999999999999987765432    11  111   1123222    233344544444


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      +.++|++++|+|
T Consensus       233 ~~~~d~~i~~~g  244 (342)
T cd08266         233 KRGVDVVVEHVG  244 (342)
T ss_pred             CCCCcEEEECCc
Confidence            446999999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.89  E-value=2.6e-05  Score=67.52  Aligned_cols=48  Identities=19%  Similarity=0.144  Sum_probs=38.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQA  109 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~  109 (210)
                      +.||+++|||+++ +|++.|+.|+++|++|++.+++.....+..+++++
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~   50 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE   50 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh
Confidence            4589999999975 99999999999999999999876544444445544

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.89  E-value=0.0001  Score=59.73  Aligned_cols=48  Identities=29%  Similarity=0.410  Sum_probs=42.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQA  109 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~  109 (210)
                      ..+|+++|+|+ +|+|++++..|++.|++|.+++|++++.+++.+++..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~  162 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR  162 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence            34789999999 6999999999999999999999999988888777644

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=97.88  E-value=9e-05  Score=58.41  Aligned_cols=75  Identities=21%  Similarity=0.357  Sum_probs=53.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCc
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEV  145 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~i  145 (210)
                      ++|+||+|.+|+.+++.|.+.|++|.+..|+..+  +..++++..  +.  ..+.+|+.+.       +.+.+.+.  .+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~--g~--~vv~~d~~~~-------~~l~~al~--g~   65 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL--GA--EVVEADYDDP-------ESLVAALK--GV   65 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT--TT--EEEES-TT-H-------HHHHHHHT--TC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc--cc--eEeecccCCH-------HHHHHHHc--CC
Confidence            6899999999999999999999999999999733  223344443  33  4457776644       45666666  47


Q ss_pred             cEEEEcCCCC
Q 045749          146 GVLINNVGIT  155 (210)
Q Consensus       146 d~lvnnAg~~  155 (210)
                      |.++.+.+..
T Consensus        66 d~v~~~~~~~   75 (233)
T PF05368_consen   66 DAVFSVTPPS   75 (233)
T ss_dssp             SEEEEESSCS
T ss_pred             ceEEeecCcc
Confidence            8888887754

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.88  E-value=3.8e-05  Score=71.68  Aligned_cols=137  Identities=18%  Similarity=0.193  Sum_probs=93.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHH--H-HHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKL--E-KISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l--~-~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ..|.++|+||-+|.|+++|..|..+|++ +++++|+.-+-  + ......++.  +.++.+-..|++......   +-+.
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~~ga~---~Li~ 1841 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTAEGAR---GLIE 1841 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhhhhHH---HHHH
Confidence            3689999999999999999999999997 88899975332  1 122333333  455444444444332222   2222


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +...-.++..++|-|.+....  .+++.++++|+++-+..+.|++++-+.-....-  .-..+|..||+.
T Consensus      1842 ~s~kl~~vGGiFnLA~VLRD~--LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~--~LdyFv~FSSvs 1907 (2376)
T KOG1202|consen 1842 ESNKLGPVGGIFNLAAVLRDG--LIENQTPKNFKDVAKPKYSGTINLDRVSREICP--ELDYFVVFSSVS 1907 (2376)
T ss_pred             HhhhcccccchhhHHHHHHhh--hhcccChhHHHhhhccceeeeeehhhhhhhhCc--ccceEEEEEeec
Confidence            222222688899999887664  488999999999999999999998877554332  225678778764

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.86  E-value=0.00045  Score=57.19  Aligned_cols=83  Identities=22%  Similarity=0.320  Sum_probs=64.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHH----cCCeEEEEecChhHHHHHHHHHHhhCCC--ceeEEEEEecccCccchhhHHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQ----HGLNLILVSRNHNKLEKISNEIQAENPN--TQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~----~G~~Vi~~~r~~~~l~~~~~~l~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      -++|-|||+--|.-+++++.+    .|..+.+.+||+++++++.+++.+..+.  .+..++.+|.+|+    +.+.++.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~----~Sl~emak   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANE----ASLDEMAK   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCH----HHHHHHHh
Confidence            378999999999999999998    7899999999999999999988776432  2333677787776    33444444


Q ss_pred             HhcCCCccEEEEcCCCCC
Q 045749          139 AIDGLEVGVLINNVGITY  156 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~  156 (210)
                      ..   +  +++||+|...
T Consensus        83 ~~---~--vivN~vGPyR   95 (423)
T KOG2733|consen   83 QA---R--VIVNCVGPYR   95 (423)
T ss_pred             hh---E--EEEeccccce
Confidence            43   2  8999999754

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.79  E-value=0.00063  Score=51.41  Aligned_cols=107  Identities=14%  Similarity=0.209  Sum_probs=72.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      .+-|.|||+-.|..++++..++|+.|+.+.||+.++...          ..+.+.+.|+.+.       ..+.+.+.  .
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~-------~~~a~~l~--g   62 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDL-------TSLASDLA--G   62 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccCh-------hhhHhhhc--C
Confidence            366889999999999999999999999999998876432          2445667777666       23344444  4


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .|++|..-|...+..       .+...+           ..+.++..++..+..|++.++...+
T Consensus        63 ~DaVIsA~~~~~~~~-------~~~~~k-----------~~~~li~~l~~agv~RllVVGGAGS  108 (211)
T COG2910          63 HDAVISAFGAGASDN-------DELHSK-----------SIEALIEALKGAGVPRLLVVGGAGS  108 (211)
T ss_pred             CceEEEeccCCCCCh-------hHHHHH-----------HHHHHHHHHhhcCCeeEEEEcCccc
Confidence            789998877543211       111111           1445555566657788888876543

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.78  E-value=0.0002  Score=52.75  Aligned_cols=76  Identities=22%  Similarity=0.365  Sum_probs=53.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ..+++++|+|+ +++|.++++.|.+.| .+|++++|++++.++..+++....       ...+.++.       ++.   
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-------~~~~~~~~-------~~~---   78 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-------IAIAYLDL-------EEL---   78 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-------cceeecch-------hhc---
Confidence            44788999998 899999999999996 789999999988887776654321       11122211       111   


Q ss_pred             hcCCCccEEEEcCCCCC
Q 045749          140 IDGLEVGVLINNVGITY  156 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~  156 (210)
                      ..  +.|++|++.....
T Consensus        79 ~~--~~Dvvi~~~~~~~   93 (155)
T cd01065          79 LA--EADLIINTTPVGM   93 (155)
T ss_pred             cc--cCCEEEeCcCCCC
Confidence            23  5889999987654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.74  E-value=0.00017  Score=57.83  Aligned_cols=73  Identities=22%  Similarity=0.256  Sum_probs=54.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      .++||||++.+|.+++++|.++|++|.+..|+.++.....         ..+.....|+.+.       +.+.....  .
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~-------~~l~~a~~--G   63 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDP-------KSLVAGAK--G   63 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCH-------hHHHHHhc--c
Confidence            5899999999999999999999999999999988776543         3445556666655       34444444  3


Q ss_pred             ccEEEEcCCCC
Q 045749          145 VGVLINNVGIT  155 (210)
Q Consensus       145 id~lvnnAg~~  155 (210)
                      +|.+++..+..
T Consensus        64 ~~~~~~i~~~~   74 (275)
T COG0702          64 VDGVLLISGLL   74 (275)
T ss_pred             ccEEEEEeccc
Confidence            66666666644

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.73  E-value=0.00052  Score=57.15  Aligned_cols=79  Identities=23%  Similarity=0.403  Sum_probs=51.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      |+++||+||+||+|....+.....|++++++..++++.+ ..+++   +.+.-     .|..++    +..+++.+..++
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l---GAd~v-----i~y~~~----~~~~~v~~~t~g  209 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL---GADHV-----INYREE----DFVEQVRELTGG  209 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc---CCCEE-----EcCCcc----cHHHHHHHHcCC
Confidence            899999999999999988888888988777777666554 33332   21111     122222    244556555554


Q ss_pred             CCccEEEEcCCC
Q 045749          143 LEVGVLINNVGI  154 (210)
Q Consensus       143 ~~id~lvnnAg~  154 (210)
                      ..+|+++...|.
T Consensus       210 ~gvDvv~D~vG~  221 (326)
T COG0604         210 KGVDVVLDTVGG  221 (326)
T ss_pred             CCceEEEECCCH
Confidence            468888877763

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.72  E-value=0.00036  Score=56.99  Aligned_cols=50  Identities=24%  Similarity=0.355  Sum_probs=43.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhC
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAEN  111 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~  111 (210)
                      ..+|.++|.|+ ||.|++++..|++.|+ +|++++|+.++.+++.+++....
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~  175 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF  175 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence            45788999987 7899999999999998 69999999999999888886553

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.68  E-value=0.00033  Score=58.32  Aligned_cols=115  Identities=20%  Similarity=0.241  Sum_probs=66.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC-------CeEEEEecChh--HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHG-------LNLILVSRNHN--KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G-------~~Vi~~~r~~~--~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      .++||||+|.+|..++..|+.+|       ..|++.|+++.  .++....++.+..    . ....|+...       ..
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~----~-~~~~~~~~~-------~~   71 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA----F-PLLKSVVAT-------TD   71 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc----c-cccCCceec-------CC
Confidence            48999999999999999999854       47999999653  2222111111100    0 000011111       12


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-C-CCEEEEecc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-K-KGAIVNIGS  205 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~-~g~iv~isS  205 (210)
                      ..+.+.  +.|++|+.||.....     ..+.+   +.++.|+    .+.+...+.+.+. + .+.++++|.
T Consensus        72 ~~~~l~--~aDiVI~tAG~~~~~-----~~~R~---~l~~~N~----~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          72 PEEAFK--DVDVAILVGAMPRKE-----GMERK---DLLKANV----KIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             HHHHhC--CCCEEEEeCCcCCCC-----CCCHH---HHHHHHH----HHHHHHHHHHHHhCCCCeEEEEecC
Confidence            333444  588999999985431     22333   4666664    4556666666665 2 566666664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.66  E-value=0.0003  Score=53.78  Aligned_cols=80  Identities=16%  Similarity=0.292  Sum_probs=49.6

Q ss_pred             CCcEEEEEcCC----------------ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEeccc
Q 045749           62 YGSWALITGAT----------------DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC  125 (210)
Q Consensus        62 ~gk~vlITGas----------------sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~  125 (210)
                      +||.|+||+|+                |-.|.++|+++.++|++|+++.... .+..          ...+..+..    
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~~----------p~~~~~i~v----   66 (185)
T PF04127_consen    2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS-SLPP----------PPGVKVIRV----   66 (185)
T ss_dssp             TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT-S--------------TTEEEEE-----
T ss_pred             CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc-cccc----------cccceEEEe----
Confidence            57888888764                4789999999999999999998763 2110          223344332    


Q ss_pred             CccchhhHHHHHHHhcCCCccEEEEcCCCCCCCc
Q 045749          126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKA  159 (210)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~  159 (210)
                       .+..+..+.+.+.++  .-|++|++|.+....+
T Consensus        67 -~sa~em~~~~~~~~~--~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   67 -ESAEEMLEAVKELLP--SADIIIMAAAVSDFRP   97 (185)
T ss_dssp             -SSHHHHHHHHHHHGG--GGSEEEE-SB--SEEE
T ss_pred             -cchhhhhhhhccccC--cceeEEEecchhheee
Confidence             244555667777766  3589999999987644

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.65  E-value=0.00053  Score=57.37  Aligned_cols=65  Identities=26%  Similarity=0.323  Sum_probs=51.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCh---------------------hHHHHHHHHHHhhCCCcee
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNH---------------------NKLEKISNEIQAENPNTQI  116 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~---------------------~~l~~~~~~l~~~~~~~~~  116 (210)
                      .+++++.|+|.|+ ||+|..+|+.|++.|. +++++|++.                     .+.+.+++.+++.+|..++
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i   98 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI   98 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence            3466889999987 7899999999999997 799999873                     3556666778887777777


Q ss_pred             EEEEEecc
Q 045749          117 NIVEYDFS  124 (210)
Q Consensus       117 ~~~~~D~~  124 (210)
                      ..+..|++
T Consensus        99 ~~~~~~~~  106 (338)
T PRK12475         99 VPVVTDVT  106 (338)
T ss_pred             EEEeccCC
Confidence            77765553

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.59  E-value=0.00018  Score=63.63  Aligned_cols=47  Identities=21%  Similarity=0.451  Sum_probs=41.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      ...+|+++|+|+ +|+|++++..|+++|++|++++|+.++.+++.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            456899999999 59999999999999999999999988887776554

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.58  E-value=0.005  Score=44.91  Aligned_cols=112  Identities=19%  Similarity=0.365  Sum_probs=71.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCC--ceeEEEEEecccCccchhhHHHHHHHh
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPN--TQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+.|.|++|.+|..+|..+..+|.  ++++.|+++++++....++......  .......    ++          .+.+
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~----~~----------~~~~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS----GD----------YEAL   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE----SS----------GGGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc----cc----------cccc
Confidence            478999999999999999998874  6999999999888888887654211  1211111    11          1112


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEec
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIG  204 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~is  204 (210)
                      .  +-|++|..||.... +    ..+..   +.++.|..    +.+...+.+.+. ..+.++.+|
T Consensus        68 ~--~aDivvitag~~~~-~----g~sR~---~ll~~N~~----i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   68 K--DADIVVITAGVPRK-P----GMSRL---DLLEANAK----IVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             T--TESEEEETTSTSSS-T----TSSHH---HHHHHHHH----HHHHHHHHHHHHSTTSEEEE-S
T ss_pred             c--cccEEEEecccccc-c----cccHH---HHHHHhHh----HHHHHHHHHHHhCCccEEEEeC
Confidence            2  58899999997532 2    22433   35666654    445555555444 356666665

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.56  E-value=0.00057  Score=55.60  Aligned_cols=80  Identities=23%  Similarity=0.345  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+++++|+|+++++|.++++.+...|++|+++++++++.+.+ +++     +.. .  ..+...    ....+.+.+...
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~--~~~~~~----~~~~~~~~~~~~  205 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GAD-V--AINYRT----EDFAEEVKEATG  205 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC-E--EEeCCc----hhHHHHHHHHhC
Confidence            378999999999999999999999999999999987766544 222     111 1  122211    223344444443


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|.+++|+|.
T Consensus       206 ~~~~d~vi~~~g~  218 (323)
T cd05276         206 GRGVDVILDMVGG  218 (323)
T ss_pred             CCCeEEEEECCch
Confidence            3368999998874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.55  E-value=0.00049  Score=56.09  Aligned_cols=80  Identities=18%  Similarity=0.277  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+|+++++|.++++.+...|++|+++++++++.+.+. ++     +...   ..|..++    ...+.+.+...
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~~---~~~~~~~----~~~~~~~~~~~  210 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA-----GADA---VFNYRAE----DLADRILAATA  210 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEeCCCc----CHHHHHHHHcC
Confidence            3789999999999999999999999999999999887655442 21     2111   1233222    23344444433


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|.+++++|.
T Consensus       211 ~~~~d~vi~~~~~  223 (325)
T cd08253         211 GQGVDVIIEVLAN  223 (325)
T ss_pred             CCceEEEEECCch
Confidence            3368999998764

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.54  E-value=0.0019  Score=53.38  Aligned_cols=112  Identities=18%  Similarity=0.318  Sum_probs=70.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCC--CceeEEEEEecccCccchhhHHHHHHHh
Q 045749           65 WALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+.|.|+ +++|..+|..++.+|  .+++++++++++.+....++.+...  .......    ..+      .+    ..
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~----~~~------~~----~l   66 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK----AGD------YS----DC   66 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE----cCC------HH----Hh
Confidence            5778886 899999999999999  4799999999998888888765421  1111111    111      11    12


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGS  205 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS  205 (210)
                      .  +-|++|+++|.... +    ..+..   +.++.|.    .+.+...+.+.+.. .+.++++|-
T Consensus        67 ~--~aDIVIitag~~~~-~----g~~R~---dll~~N~----~i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          67 K--DADIVVITAGAPQK-P----GETRL---DLLEKNA----KIMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             C--CCCEEEEccCCCCC-C----CCCHH---HHHHHHH----HHHHHHHHHHHHhCCCeEEEEecC
Confidence            3  58899999997533 2    22343   3455554    45555566555543 566666653

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.53  E-value=0.00099  Score=51.64  Aligned_cols=83  Identities=23%  Similarity=0.440  Sum_probs=57.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEE
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      ++.+++|+|.|+ +|+|.++++.|++.|. +++++|.+                   ..+.+.+.+.+++.+|..++..+
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            456788999875 7999999999999997 79999987                   34556667777777776666555


Q ss_pred             EEecccCccchhhHHHHHHHhcCCCccEEEEcCC
Q 045749          120 EYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVG  153 (210)
Q Consensus       120 ~~D~~~~~~~~~~~~~~~~~~~~~~id~lvnnAg  153 (210)
                      ..++..        +.+.+.+.  +.|++|.+..
T Consensus        97 ~~~i~~--------~~~~~~~~--~~D~Vi~~~d  120 (202)
T TIGR02356        97 KERVTA--------ENLELLIN--NVDLVLDCTD  120 (202)
T ss_pred             hhcCCH--------HHHHHHHh--CCCEEEECCC
Confidence            433321        12233333  4678877653

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.52  E-value=0.0008  Score=54.92  Aligned_cols=48  Identities=27%  Similarity=0.410  Sum_probs=41.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQA  109 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~  109 (210)
                      ..+|.++|.|+ +|.|++++..|++.|+ +|+++.|+.++.+++.+++..
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~  171 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQ  171 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhh
Confidence            45888999976 9999999999999997 599999999998888777643

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.52  E-value=0.0012  Score=53.76  Aligned_cols=51  Identities=27%  Similarity=0.451  Sum_probs=44.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhh
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAE  110 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~  110 (210)
                      .+..|+.++|.|| +|-+++++..|++.|+ +++++.|+.++.+++.+.+.+.
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~  173 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGEL  173 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc
Confidence            3445899999987 7999999999999996 6999999999999998888765

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.49  E-value=0.00071  Score=56.28  Aligned_cols=44  Identities=14%  Similarity=0.292  Sum_probs=37.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISN  105 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~  105 (210)
                      .|++++|+||++++|..+++.....|++|+.+++++++.+.+.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~  194 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKN  194 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            38899999999999999988888899999999998877665543

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.49  E-value=0.0037  Score=55.43  Aligned_cols=103  Identities=16%  Similarity=0.117  Sum_probs=72.1

Q ss_pred             CCCcccCCcEEEEEcCC-ChHHHHHHHHHHHcCCeEEEEecC-hhHHHHHHHHHHhhC--CCceeEEEEEecccCccchh
Q 045749           56 PKNLKSYGSWALITGAT-DGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAEN--PNTQINIVEYDFSCDVVSAG  131 (210)
Q Consensus        56 ~~~~~~~gk~vlITGas-sGiG~~~a~~l~~~G~~Vi~~~r~-~~~l~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~  131 (210)
                      +......+|+++||||+ +.||.+++..|+..|++|+++..+ .++..+..+.+-..+  ++....++..+.++..+++.
T Consensus       389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA  468 (866)
T COG4982         389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA  468 (866)
T ss_pred             CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence            45566779999999997 679999999999999999987554 344555666665443  35677778888877766666


Q ss_pred             hHHHHHHHhc------------CCCccEEEEcCCCCCCC
Q 045749          132 NIKAIEMAID------------GLEVGVLINNVGITYPK  158 (210)
Q Consensus       132 ~~~~~~~~~~------------~~~id~lvnnAg~~~~~  158 (210)
                      .++-+..+-.            ...+|.++--|.....+
T Consensus       469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G  507 (866)
T COG4982         469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSG  507 (866)
T ss_pred             HHHHhccccccccCCcceecccccCcceeeecccCCccC
Confidence            6665533322            11467788777765544

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.42  E-value=0.0017  Score=54.41  Aligned_cols=65  Identities=23%  Similarity=0.353  Sum_probs=49.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCh---------------------hHHHHHHHHHHhhCCCcee
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNH---------------------NKLEKISNEIQAENPNTQI  116 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~---------------------~~l~~~~~~l~~~~~~~~~  116 (210)
                      .++..++|+|.|+ +|+|..+|+.|++.|. ++.++|.+.                     .+.+.+.+.+++..|..++
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v   98 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV   98 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence            3456788999988 8999999999999998 799999862                     3445555667766666666


Q ss_pred             EEEEEecc
Q 045749          117 NIVEYDFS  124 (210)
Q Consensus       117 ~~~~~D~~  124 (210)
                      .....+++
T Consensus        99 ~~~~~~~~  106 (339)
T PRK07688         99 EAIVQDVT  106 (339)
T ss_pred             EEEeccCC
Confidence            66655543

>PRK05086 malate dehydrogenase; Provisional

Probab=97.41  E-value=0.0029  Score=52.43  Aligned_cols=114  Identities=20%  Similarity=0.265  Sum_probs=62.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHH---cCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           65 WALITGATDGIGKAFAHQLAQ---HGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~---~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .++|.||++++|.+++..+..   .+..+++.+|++. .+...-++.+.  .... .+.. . +.       +.+.+.+.
T Consensus         2 KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~--~~~~-~i~~-~-~~-------~d~~~~l~   68 (312)
T PRK05086          2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI--PTAV-KIKG-F-SG-------EDPTPALE   68 (312)
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC--CCCc-eEEE-e-CC-------CCHHHHcC
Confidence            588999999999999998855   2456888898743 21111122211  1001 1111 0 00       11223334


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS  205 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS  205 (210)
                        +.|++|.++|.... +    ..+..   +.+..|....    +...+.|.+.+..++|.+.|
T Consensus        69 --~~DiVIitaG~~~~-~----~~~R~---dll~~N~~i~----~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         69 --GADVVLISAGVARK-P----GMDRS---DLFNVNAGIV----KNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             --CCCEEEEcCCCCCC-C----CCCHH---HHHHHHHHHH----HHHHHHHHHhCCCeEEEEcc
Confidence              48899999998543 1    22333   3566676444    45555566655555555443

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.41  E-value=0.0021  Score=52.52  Aligned_cols=49  Identities=22%  Similarity=0.384  Sum_probs=42.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAE  110 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~  110 (210)
                      ..+|.++|.|| ||-|++++..|++.|+ ++++++|+.++.+++.+++...
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~  174 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA  174 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc
Confidence            44789999987 8999999999999997 5999999999998888777543

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.41  E-value=0.0026  Score=52.95  Aligned_cols=111  Identities=20%  Similarity=0.226  Sum_probs=67.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecChhH--HHHHHHHHHhhCCCceeEEEEEecccCccch--hhH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL-------NLILVSRNHNK--LEKISNEIQAENPNTQINIVEYDFSCDVVSA--GNI  133 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~-------~Vi~~~r~~~~--l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~--~~~  133 (210)
                      ++.|+||+|.+|..++..++.+|.       .+++.|++++.  ++..                ..|+.+.....  ...
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~----------------~~Dl~d~~~~~~~~~~   64 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGV----------------VMELMDCAFPLLDGVV   64 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccccccee----------------EeehhcccchhcCcee
Confidence            378999999999999999998664       49999996542  2222                23333321000  000


Q ss_pred             --HHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC--CCCEEEEecc
Q 045749          134 --KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR--KKGAIVNIGS  205 (210)
Q Consensus       134 --~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~--~~g~iv~isS  205 (210)
                        ....+.+.  +.|++|..||.... +    .   +++.+.++.|+    .+.+.+.+.+.+.  ..+.++++|-
T Consensus        65 ~~~~~~~~~~--~aDiVVitAG~~~~-~----~---~tr~~ll~~N~----~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        65 PTHDPAVAFT--DVDVAILVGAFPRK-E----G---MERRDLLSKNV----KIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             ccCChHHHhC--CCCEEEEcCCCCCC-C----C---CcHHHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEeCC
Confidence              01233344  58899999997532 1    1   22455677774    4667777777665  3566776653

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.41  E-value=0.00064  Score=52.66  Aligned_cols=48  Identities=19%  Similarity=0.280  Sum_probs=41.7

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNE  106 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~  106 (210)
                      ..+++||+++|+|.+ .+|+.+|+.|.+.|++|++.+++++++++..++
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            345679999999995 899999999999999999999998887776654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.40  E-value=0.0009  Score=55.66  Aligned_cols=44  Identities=14%  Similarity=0.194  Sum_probs=36.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNE  106 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~  106 (210)
                      |++++|+||++|+|...++.....|+ +|+.+++++++.+.+.++
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~  199 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSE  199 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh
Confidence            48999999999999998877777899 799999988776655443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.38  E-value=0.001  Score=55.75  Aligned_cols=43  Identities=14%  Similarity=0.308  Sum_probs=36.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      .|++++|+||++++|...++.....|++|+.+++++++.+.+.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~  200 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK  200 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence            3889999999999999998888888999999998887765543

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.37  E-value=0.0046  Score=49.07  Aligned_cols=78  Identities=23%  Similarity=0.319  Sum_probs=50.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+|+++ +|.++++.+...|.+|+.+++++++.+.+.    +.  +.. ..  .|..+.    ...+.+. ...
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~--g~~-~~--~~~~~~----~~~~~~~-~~~  198 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK----EL--GAD-HV--IDYKEE----DLEEELR-LTG  198 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH----Hh--CCc-ee--ccCCcC----CHHHHHH-Hhc
Confidence            478999999988 999999988899999999999876654432    22  111 11  122221    1122333 333


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|++++++|.
T Consensus       199 ~~~~d~vi~~~~~  211 (271)
T cd05188         199 GGGADVVIDAVGG  211 (271)
T ss_pred             CCCCCEEEECCCC
Confidence            3379999999874

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=97.35  E-value=0.002  Score=52.58  Aligned_cols=80  Identities=19%  Similarity=0.336  Sum_probs=53.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+|+++++|.++++.....|++|+++.+++++.+.+ .+.     +.+. .  .+..    ..+..+.+.+...
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~-~--~~~~----~~~~~~~~~~~~~  205 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL-----GADI-A--INYR----EEDFVEVVKAETG  205 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCcE-E--EecC----chhHHHHHHHHcC
Confidence            378999999999999999999999999999999987765533 221     2111 0  1111    1223344444444


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|.+++++|.
T Consensus       206 ~~~~d~~i~~~~~  218 (325)
T TIGR02824       206 GKGVDVILDIVGG  218 (325)
T ss_pred             CCCeEEEEECCch
Confidence            3368999998763

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.33  E-value=0.0013  Score=54.41  Aligned_cols=42  Identities=12%  Similarity=0.253  Sum_probs=36.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|+||++++|...++.....|++|+.+++++++.+.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~  179 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL  179 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            388999999999999998887778899999999988776544

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.32  E-value=0.0019  Score=54.82  Aligned_cols=60  Identities=28%  Similarity=0.485  Sum_probs=46.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEE
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      ++.+++|+|.|+ +|+|.++++.|++.|. +++++|++                   ..+.+.+.+.+++.+|..++...
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            356778888865 8999999999999998 59999987                   45677777788777766655544


Q ss_pred             E
Q 045749          120 E  120 (210)
Q Consensus       120 ~  120 (210)
                      .
T Consensus       211 ~  211 (376)
T PRK08762        211 Q  211 (376)
T ss_pred             e
Confidence            4

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.32  E-value=0.0051  Score=52.15  Aligned_cols=76  Identities=24%  Similarity=0.285  Sum_probs=51.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .++.++|.|+ |.+|+..++.+.+.|++|++++|+.++++.+.+..     +..+   ..+..+    .   +.+.+...
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-----g~~v---~~~~~~----~---~~l~~~l~  229 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-----GGRI---HTRYSN----A---YEIEDAVK  229 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-----Ccee---EeccCC----H---HHHHHHHc
Confidence            4567888887 79999999999999999999999988766543332     1111   111111    1   23444444


Q ss_pred             CCCccEEEEcCCCC
Q 045749          142 GLEVGVLINNVGIT  155 (210)
Q Consensus       142 ~~~id~lvnnAg~~  155 (210)
                        +.|++|++++..
T Consensus       230 --~aDvVI~a~~~~  241 (370)
T TIGR00518       230 --RADLLIGAVLIP  241 (370)
T ss_pred             --cCCEEEEccccC
Confidence              478999998653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd00704 MDH Malate dehydrogenase

Probab=97.31  E-value=0.0015  Score=54.41  Aligned_cols=110  Identities=20%  Similarity=0.205  Sum_probs=67.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCh--hHHHHHHHHHHhhCCCceeEEEEEecccCc--cch--h
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL-------NLILVSRNH--NKLEKISNEIQAENPNTQINIVEYDFSCDV--VSA--G  131 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~-------~Vi~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~--~~~--~  131 (210)
                      .+.||||+|.+|..++..++.+|.       .+++.|+++  +.++..+                .|+++..  ...  .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~----------------~Dl~d~~~~~~~~~~   65 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVV----------------MELQDCAFPLLKGVV   65 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceee----------------eehhhhcccccCCcE
Confidence            478999999999999999998663       499999987  4333322                2332221  000  0


Q ss_pred             hHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC--CCCEEEEec
Q 045749          132 NIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR--KKGAIVNIG  204 (210)
Q Consensus       132 ~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~--~~g~iv~is  204 (210)
                      ......+.+.  +.|++|+.||.... +    ..+..+   .++.|.    .+.+.+.+.+.+.  ..+.++++|
T Consensus        66 i~~~~~~~~~--~aDiVVitAG~~~~-~----g~tR~d---ll~~N~----~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          66 ITTDPEEAFK--DVDVAILVGAFPRK-P----GMERAD---LLRKNA----KIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             EecChHHHhC--CCCEEEEeCCCCCC-c----CCcHHH---HHHHhH----HHHHHHHHHHHHhCCCCeEEEEeC
Confidence            0012234444  58899999997533 2    234443   566664    5667777777766  355666654

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.31  E-value=0.0029  Score=50.53  Aligned_cols=63  Identities=27%  Similarity=0.382  Sum_probs=47.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEE
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINI  118 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~  118 (210)
                      .++.+++|+|.|+ +|+|..+++.|++.|. +++++|.+                   ..+.+.+++.+++..|..++..
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~  106 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET  106 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            3456889999988 9999999999999996 58887764                   2345556677777777766665


Q ss_pred             EEEe
Q 045749          119 VEYD  122 (210)
Q Consensus       119 ~~~D  122 (210)
                      +...
T Consensus       107 ~~~~  110 (245)
T PRK05690        107 INAR  110 (245)
T ss_pred             Eecc
Confidence            5533

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.30  E-value=0.0033  Score=48.69  Aligned_cols=63  Identities=32%  Similarity=0.433  Sum_probs=44.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC---hh---------------HHHHHHHHHHhhCCCceeEEEE
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN---HN---------------KLEKISNEIQAENPNTQINIVE  120 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~---~~---------------~l~~~~~~l~~~~~~~~~~~~~  120 (210)
                      ++..++++|.|+ +|+|..+|+.|++.|. +++++|++   ++               +.+.+.+.+.+..|..++..+.
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~   96 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD   96 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence            456788999988 7999999999999998 69999887   22               2233444555556666665544


Q ss_pred             Eec
Q 045749          121 YDF  123 (210)
Q Consensus       121 ~D~  123 (210)
                      .++
T Consensus        97 ~~i   99 (200)
T TIGR02354        97 EKI   99 (200)
T ss_pred             eeC
Confidence            333

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK14968 putative methyltransferase; Provisional

Probab=97.28  E-value=0.013  Score=44.34  Aligned_cols=79  Identities=20%  Similarity=0.213  Sum_probs=52.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCc-eeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNT-QINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .++.++-.|+++|.   ++..++++|.+|+.++++++.++...+.+....... .+.++..|..+.         +    
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~----   86 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------F----   86 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------c----
Confidence            36788988887776   555566668999999999988877776665542221 156666665332         1    


Q ss_pred             cCCCccEEEEcCCCCC
Q 045749          141 DGLEVGVLINNVGITY  156 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~  156 (210)
                      ....+|.++.|.....
T Consensus        87 ~~~~~d~vi~n~p~~~  102 (188)
T PRK14968         87 RGDKFDVILFNPPYLP  102 (188)
T ss_pred             cccCceEEEECCCcCC
Confidence            1115889998876543

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.28  E-value=0.0093  Score=52.52  Aligned_cols=43  Identities=16%  Similarity=0.081  Sum_probs=37.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      ..+.+|+|.|+ +.+|...+......|++|+++|+++++++...
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae  205 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE  205 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            45889999987 79999999999999999999999998876543

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.27  E-value=0.0028  Score=45.75  Aligned_cols=80  Identities=28%  Similarity=0.485  Sum_probs=56.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEEEEe
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIVEYD  122 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~~~D  122 (210)
                      .++++|.|+ +|+|.++++.|++.|. +++++|.+                   ..+.+.+++.+.+..|..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            456777766 8999999999999998 58888864                   34567777888888888887777655


Q ss_pred             cccCccchhhHHHHHHHhcCCCccEEEEcCC
Q 045749          123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVG  153 (210)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~id~lvnnAg  153 (210)
                      ++.     +   ...+.+.  +.|++|.+..
T Consensus        81 ~~~-----~---~~~~~~~--~~d~vi~~~d  101 (135)
T PF00899_consen   81 IDE-----E---NIEELLK--DYDIVIDCVD  101 (135)
T ss_dssp             CSH-----H---HHHHHHH--TSSEEEEESS
T ss_pred             ccc-----c---ccccccc--CCCEEEEecC
Confidence            521     2   2233333  4788887753

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.27  E-value=0.0031  Score=49.79  Aligned_cols=63  Identities=30%  Similarity=0.443  Sum_probs=47.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEE
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      ++.+++|+|.|+ +|+|.++|+.|++.|. +++++|.+                   ..+.+.+.+.+++.+|..++..+
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            455788999875 8999999999999997 57777543                   34566677788888777777766


Q ss_pred             EEec
Q 045749          120 EYDF  123 (210)
Q Consensus       120 ~~D~  123 (210)
                      ..++
T Consensus        97 ~~~i  100 (228)
T cd00757          97 NERL  100 (228)
T ss_pred             ccee
Confidence            6554

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=97.26  E-value=0.0026  Score=51.43  Aligned_cols=123  Identities=17%  Similarity=0.217  Sum_probs=81.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .+..|-++-|.||++-+|+-++.+|++.|-.|++-.|..+.-   ..+++-.+.-.++.+...|+-|++++++    +.+
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~---~r~lkvmGdLGQvl~~~fd~~DedSIr~----vvk  129 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD---PRHLKVMGDLGQVLFMKFDLRDEDSIRA----VVK  129 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccc---hhheeecccccceeeeccCCCCHHHHHH----HHH
Confidence            345688999999999999999999999999999998865421   1123333335678888888887743333    322


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      .     -.++||--|--..    ..+.+.+      ++|..++=.+.+.+-    +-+--++|.+|+..
T Consensus       130 ~-----sNVVINLIGrd~e----Tknf~f~------Dvn~~~aerlArick----e~GVerfIhvS~Lg  179 (391)
T KOG2865|consen  130 H-----SNVVINLIGRDYE----TKNFSFE------DVNVHIAERLARICK----EAGVERFIHVSCLG  179 (391)
T ss_pred             h-----CcEEEEeeccccc----cCCcccc------cccchHHHHHHHHHH----hhChhheeehhhcc
Confidence            2     3489998885432    1233333      467777777766643    33445677777654

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.24  E-value=0.012  Score=47.48  Aligned_cols=114  Identities=18%  Similarity=0.286  Sum_probs=69.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHcC----CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           66 ALITGATDGIGKAFAHQLAQHG----LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G----~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +.|.||+|.+|..++..++..|    .+|++.|+++++++....++++.....  .....-.+++         ..+.+.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d---------~~~~~~   69 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDD---------PYEAFK   69 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCc---------hHHHhC
Confidence            3688998899999999999999    689999999988888888776542111  0011111222         233344


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEec
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIG  204 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~is  204 (210)
                        +-|++|..+|.....     ..+..   ..+..|    ..+.+...+.+.+. ..+.++++|
T Consensus        70 --~aDiVv~t~~~~~~~-----g~~r~---~~~~~n----~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          70 --DADVVIITAGVGRKP-----GMGRL---DLLKRN----VPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             --CCCEEEECCCCCCCc-----CCCHH---HHHHHH----HHHHHHHHHHHHHHCCCeEEEEec
Confidence              578999999875432     11222   123333    33455555555544 345666654

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.23  E-value=0.0024  Score=54.87  Aligned_cols=46  Identities=22%  Similarity=0.320  Sum_probs=39.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l  107 (210)
                      +.|+.++|.|+ ||+|+.+++.|+..|+ +++++.|+.++.+++.+++
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            45899999988 9999999999999996 6999999988887776654

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.22  E-value=0.0068  Score=44.12  Aligned_cols=77  Identities=25%  Similarity=0.456  Sum_probs=53.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEEEEeccc
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIVEYDFSC  125 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~~~D~~~  125 (210)
                      ++|.|+ +|+|.++++.|++.|. ++.++|.+                   ..+.+.+++.+++.+|..++..+..++..
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~   80 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE   80 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence            677776 8999999999999998 58888765                   23455666777777777777666555433


Q ss_pred             CccchhhHHHHHHHhcCCCccEEEEcCC
Q 045749          126 DVVSAGNIKAIEMAIDGLEVGVLINNVG  153 (210)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~id~lvnnAg  153 (210)
                      +        ...+.+.  +.|++|.+..
T Consensus        81 ~--------~~~~~~~--~~diVi~~~d   98 (143)
T cd01483          81 D--------NLDDFLD--GVDLVIDAID   98 (143)
T ss_pred             h--------hHHHHhc--CCCEEEECCC
Confidence            2        1123333  5778887664

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.19  E-value=0.018  Score=47.71  Aligned_cols=114  Identities=15%  Similarity=0.314  Sum_probs=74.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCC-ceeEEEEEecccCccchhhHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPN-TQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .++.+.|+|+ |++|..+|..++.+|.  .+++.|++++.++....++....+. .+.     .+...     ..+    
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~-----~i~~~-----~~~----   69 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPT-----KIYAG-----DYS----   69 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCe-----EEEeC-----CHH----
Confidence            3678999998 9999999999999887  6999999999988888888765321 111     11111     012    


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                      .+.  +-|++|..||.... +    ..+.++   .++.|.    .+.+...+.+.+.. .+.++++|
T Consensus        70 ~~~--~adivIitag~~~k-~----g~~R~d---ll~~N~----~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         70 DCK--DADLVVITAGAPQK-P----GETRLD---LVEKNL----KIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             HhC--CCCEEEEecCCCCC-C----CCCHHH---HHHHHH----HHHHHHHHHHHHhCCCeEEEEcc
Confidence            233  57899999998532 2    234443   455554    34555555565543 56666665

>PRK06849 hypothetical protein; Provisional

Probab=97.16  E-value=0.0037  Score=53.26  Aligned_cols=39  Identities=26%  Similarity=0.261  Sum_probs=35.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE  101 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~  101 (210)
                      .++|+|||++.++|.++++.|.+.|++|++++.++....
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~   42 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLS   42 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHH
Confidence            689999999999999999999999999999999875543

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.13  E-value=0.0065  Score=49.76  Aligned_cols=49  Identities=24%  Similarity=0.346  Sum_probs=39.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCh---hHHHHHHHHHHh
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNH---NKLEKISNEIQA  109 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~---~~l~~~~~~l~~  109 (210)
                      +..+|.++|.|+ +|-+++++..++..|+ +|.+++|++   ++.+++.+++..
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~  173 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE  173 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence            456889999997 7779999999999997 699999995   466666666543

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.12  E-value=0.0069  Score=47.32  Aligned_cols=64  Identities=28%  Similarity=0.342  Sum_probs=47.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC------------------hhHHHHHHHHHHhhCCCceeEEE
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRN------------------HNKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~------------------~~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      .++..++|+|.|+ +|+|..+++.|++.|.. ++++|.+                  ..+.+.+.+.+++.+|..++..+
T Consensus        24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~  102 (212)
T PRK08644         24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAH  102 (212)
T ss_pred             HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            3456788999986 89999999999999985 8888887                  13555666677777666666555


Q ss_pred             EEec
Q 045749          120 EYDF  123 (210)
Q Consensus       120 ~~D~  123 (210)
                      ...+
T Consensus       103 ~~~i  106 (212)
T PRK08644        103 NEKI  106 (212)
T ss_pred             eeec
Confidence            4433

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.11  E-value=0.0036  Score=51.10  Aligned_cols=42  Identities=26%  Similarity=0.353  Sum_probs=37.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .+++++|+|+++++|.++++.+...|++++.+++++++.+.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            367999999999999999999999999999999987765544

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK08223 hypothetical protein; Validated

Probab=97.11  E-value=0.0051  Score=50.09  Aligned_cols=65  Identities=20%  Similarity=0.314  Sum_probs=49.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEE
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINI  118 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~  118 (210)
                      .++++..|+|.|+ +|+|..+++.|++.|. ++.++|.+                   ..+.+.+++.+++.+|..++..
T Consensus        23 ~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~  101 (287)
T PRK08223         23 QRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRA  101 (287)
T ss_pred             HHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEE
Confidence            3456788999877 7999999999999996 58888765                   2355666777777777777777


Q ss_pred             EEEecc
Q 045749          119 VEYDFS  124 (210)
Q Consensus       119 ~~~D~~  124 (210)
                      +...++
T Consensus       102 ~~~~l~  107 (287)
T PRK08223        102 FPEGIG  107 (287)
T ss_pred             EecccC
Confidence            665444

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=97.10  E-value=0.0031  Score=51.97  Aligned_cols=42  Identities=17%  Similarity=0.300  Sum_probs=36.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|.+++|+||++++|...++.....|++|+.+++++++.+.+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l  184 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL  184 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            388999999999999998888888999999999888765544

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.07  E-value=0.0066  Score=51.22  Aligned_cols=65  Identities=18%  Similarity=0.355  Sum_probs=50.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCh-------------------hHHHHHHHHHHhhCCCceeEE
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNH-------------------NKLEKISNEIQAENPNTQINI  118 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~-------------------~~l~~~~~~l~~~~~~~~~~~  118 (210)
                      .++++++|+|.|+ +|+|.++++.|++.|. +++++|.+.                   .+.+.+++.+++.+|..++..
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~  102 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV  102 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence            3456789999987 8999999999999997 588888752                   456777788888888877777


Q ss_pred             EEEecc
Q 045749          119 VEYDFS  124 (210)
Q Consensus       119 ~~~D~~  124 (210)
                      +...++
T Consensus       103 ~~~~i~  108 (355)
T PRK05597        103 SVRRLT  108 (355)
T ss_pred             EEeecC
Confidence            654443

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.06  E-value=0.0035  Score=52.65  Aligned_cols=81  Identities=22%  Similarity=0.351  Sum_probs=53.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ..|+++||.||++|.|.+.++-....|+..+++++++++.+ ..+++     +..   ...|..+    .+.++++.+..
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l-----GAd---~vvdy~~----~~~~e~~kk~~  222 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL-----GAD---EVVDYKD----ENVVELIKKYT  222 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc-----CCc---EeecCCC----HHHHHHHHhhc
Confidence            35899999999999999999888888966566666655543 22222     211   1123333    45555665554


Q ss_pred             cCCCccEEEEcCCCC
Q 045749          141 DGLEVGVLINNVGIT  155 (210)
Q Consensus       141 ~~~~id~lvnnAg~~  155 (210)
                       +..+|+++-|+|..
T Consensus       223 -~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  223 -GKGVDVVLDCVGGS  236 (347)
T ss_pred             -CCCccEEEECCCCC
Confidence             34799999999873

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.04  E-value=0.002  Score=56.39  Aligned_cols=46  Identities=28%  Similarity=0.436  Sum_probs=39.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNE  106 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~  106 (210)
                      +..+++++|+|+ +|+|++++..|++.|++|++.+|+.++.++..++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            456899999996 6999999999999999999999998877766544

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.03  E-value=0.0074  Score=48.08  Aligned_cols=60  Identities=32%  Similarity=0.455  Sum_probs=45.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEE
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      ++++++|+|.|+ +|+|..+++.|++.|. +++++|.+                   ..+.+.+.+.+++.+|..++..+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            455778888876 7999999999999996 58887765                   23455666777777777766665


Q ss_pred             E
Q 045749          120 E  120 (210)
Q Consensus       120 ~  120 (210)
                      .
T Consensus       100 ~  100 (240)
T TIGR02355       100 N  100 (240)
T ss_pred             e
Confidence            4

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.03  E-value=0.0042  Score=51.70  Aligned_cols=42  Identities=29%  Similarity=0.542  Sum_probs=35.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      .|+++.|+|++ |+|...++.....|++|+..+|++++++.+.
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~  207 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAK  207 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHH
Confidence            48999999998 9998777666669999999999999876544

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.03  E-value=0.004  Score=51.20  Aligned_cols=42  Identities=31%  Similarity=0.438  Sum_probs=36.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .+++++|+||++++|.++++.+...|++|+.+++++++.+.+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~  203 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL  203 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            378999999999999999999999999999999887665443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.03  E-value=0.0064  Score=47.96  Aligned_cols=75  Identities=19%  Similarity=0.355  Sum_probs=49.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      .++|.|+ +-+|..+|+.|.++|++|++++++++..++..++      ......+..|-+++        .+.++.+-.+
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~--------~~L~~agi~~   66 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDE--------DVLEEAGIDD   66 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCH--------HHHHhcCCCc
Confidence            4566655 7899999999999999999999999887763331      12345555665544        2222333235


Q ss_pred             ccEEEEcCCC
Q 045749          145 VGVLINNVGI  154 (210)
Q Consensus       145 id~lvnnAg~  154 (210)
                      .|++|...|.
T Consensus        67 aD~vva~t~~   76 (225)
T COG0569          67 ADAVVAATGN   76 (225)
T ss_pred             CCEEEEeeCC
Confidence            6677665553

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=97.02  E-value=0.0049  Score=50.52  Aligned_cols=79  Identities=19%  Similarity=0.303  Sum_probs=53.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +.+++|+|+++++|.++++.....|++|+.+++++++.+.+ +++     +.. ..  .|..+    ....+.+.+..++
T Consensus       143 ~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~--~~~~~----~~~~~~~~~~~~~  209 (324)
T cd08244         143 GDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL-----GAD-VA--VDYTR----PDWPDQVREALGG  209 (324)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCC-EE--EecCC----ccHHHHHHHHcCC
Confidence            78999999999999999999999999999999988776543 222     211 11  12211    1223444444443


Q ss_pred             CCccEEEEcCCC
Q 045749          143 LEVGVLINNVGI  154 (210)
Q Consensus       143 ~~id~lvnnAg~  154 (210)
                      ..+|.++++.|.
T Consensus       210 ~~~d~vl~~~g~  221 (324)
T cd08244         210 GGVTVVLDGVGG  221 (324)
T ss_pred             CCceEEEECCCh
Confidence            368899988654

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.00  E-value=0.012  Score=44.58  Aligned_cols=57  Identities=30%  Similarity=0.472  Sum_probs=42.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCe-EEEEecCh------------------hHHHHHHHHHHhhCCCceeEEEEEec
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLN-LILVSRNH------------------NKLEKISNEIQAENPNTQINIVEYDF  123 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~------------------~~l~~~~~~l~~~~~~~~~~~~~~D~  123 (210)
                      |+|.|+ +|+|..+++.|++.|.. ++++|.+.                  .+.+.+.+.+++..|..++..+...+
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~   77 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKI   77 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeec
Confidence            567775 89999999999999985 99999874                  34455566666776777666655443

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=97.00  E-value=0.0076  Score=54.09  Aligned_cols=63  Identities=19%  Similarity=0.223  Sum_probs=48.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC----------------------hhHHHHHHHHHHhhCCCcee
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN----------------------HNKLEKISNEIQAENPNTQI  116 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~----------------------~~~l~~~~~~l~~~~~~~~~  116 (210)
                      ++++.+|+|.|+ ||+|-.+|+.|++.|. +++++|.+                      ..+.+.+++.+++.+|+.++
T Consensus       335 kL~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i  413 (664)
T TIGR01381       335 RYSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQA  413 (664)
T ss_pred             HHhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEE
Confidence            456888999877 8999999999999997 48888764                      12445566778888888887


Q ss_pred             EEEEEec
Q 045749          117 NIVEYDF  123 (210)
Q Consensus       117 ~~~~~D~  123 (210)
                      ..+...+
T Consensus       414 ~~~~~~I  420 (664)
T TIGR01381       414 TGHRLTV  420 (664)
T ss_pred             EEeeeee
Confidence            7776653

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.97  E-value=0.018  Score=50.68  Aligned_cols=42  Identities=17%  Similarity=0.067  Sum_probs=36.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      ..+.+++|.|+ +.+|...+..+...|++|++.+++.++++..
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a  203 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  203 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            34678999986 8999999999999999999999998876544

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=96.93  E-value=0.002  Score=51.93  Aligned_cols=125  Identities=16%  Similarity=0.164  Sum_probs=79.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCh-hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQH--GLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~--G~~Vi~~~r~~-~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+.++||||.+-||...+..++..  .++.+..+.-. -.-.+..++..   ...+.+++..|+.+.       ..+...
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~---n~p~ykfv~~di~~~-------~~~~~~   75 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR---NSPNYKFVEGDIADA-------DLVLYL   75 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc---cCCCceEeeccccch-------HHHHhh
Confidence            378999999999999999999876  35555444311 00022222222   256788888887766       222223


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      +...++|.++|-|...+...      +.-+--.....|++++..+.+.+.-.-   +-.++|.+|+-
T Consensus        76 ~~~~~id~vihfaa~t~vd~------s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTd  133 (331)
T KOG0747|consen   76 FETEEIDTVIHFAAQTHVDR------SFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTD  133 (331)
T ss_pred             hccCchhhhhhhHhhhhhhh------hcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEeccc
Confidence            33337999999998654321      111222457789999999998876432   34578888863

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.93  E-value=0.0026  Score=52.36  Aligned_cols=78  Identities=26%  Similarity=0.317  Sum_probs=57.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      .-.+|-||++--|+-+|++|+++|.+-.+.+||.++++.+.+++..     +...++++.      ..   .+.+...  
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~-----~~~~~p~~~------p~---~~~~~~~--   70 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP-----EAAVFPLGV------PA---ALEAMAS--   70 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc-----cccccCCCC------HH---HHHHHHh--
Confidence            4578999999999999999999999999999999999998888733     222222211      23   3333344  


Q ss_pred             CccEEEEcCCCCCC
Q 045749          144 EVGVLINNVGITYP  157 (210)
Q Consensus       144 ~id~lvnnAg~~~~  157 (210)
                      +.++++||+|....
T Consensus        71 ~~~VVlncvGPyt~   84 (382)
T COG3268          71 RTQVVLNCVGPYTR   84 (382)
T ss_pred             cceEEEeccccccc
Confidence            46699999997543

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.92  E-value=0.0032  Score=47.38  Aligned_cols=43  Identities=16%  Similarity=0.309  Sum_probs=37.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      ++.||.++|.|++.-.|..+++.|.++|++|.++.|+.+++.+
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~   83 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE   83 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH
Confidence            4669999999996667999999999999999999998765543

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.92  E-value=0.0049  Score=50.16  Aligned_cols=78  Identities=21%  Similarity=0.340  Sum_probs=54.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHH-HcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLA-QHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~-~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      |++++|++|++..|.- +-|++ -+|++|+-++-.+++.+-+.+++.            +|..-+...++..+.+.+..+
T Consensus       151 GetvvVSaAaGaVGsv-vgQiAKlkG~rVVGiaGg~eK~~~l~~~lG------------fD~~idyk~~d~~~~L~~a~P  217 (340)
T COG2130         151 GETVVVSAAAGAVGSV-VGQIAKLKGCRVVGIAGGAEKCDFLTEELG------------FDAGIDYKAEDFAQALKEACP  217 (340)
T ss_pred             CCEEEEEecccccchH-HHHHHHhhCCeEEEecCCHHHHHHHHHhcC------------CceeeecCcccHHHHHHHHCC
Confidence            9999999999999964 44555 579999999999888765555441            122222222344566777766


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      + .||+.+-|.|.
T Consensus       218 ~-GIDvyfeNVGg  229 (340)
T COG2130         218 K-GIDVYFENVGG  229 (340)
T ss_pred             C-CeEEEEEcCCc
Confidence            5 69999999984

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.91  E-value=0.0061  Score=50.18  Aligned_cols=42  Identities=12%  Similarity=0.228  Sum_probs=36.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|.|+++++|.++++...+.|++|+.+++++++.+.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~  186 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWL  186 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            378999999999999999999999999999999988765544

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.86  E-value=0.0022  Score=41.19  Aligned_cols=33  Identities=33%  Similarity=0.298  Sum_probs=22.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHH-HcCCeEEEEecC
Q 045749           64 SWALITGATDGIGKAFAHQLA-QHGLNLILVSRN   96 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~-~~G~~Vi~~~r~   96 (210)
                      |+|||+|+|+|.|++-.-.++ ..|++.+-++..
T Consensus        40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE   73 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE   73 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred             ceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence            899999999999999444444 667887777654

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.84  E-value=0.014  Score=49.52  Aligned_cols=64  Identities=20%  Similarity=0.407  Sum_probs=48.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEE
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINI  118 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~  118 (210)
                      .++.+++|+|.|+ +|+|..+++.|++.|. +++++|.+                   ..+.+.+.+.+.+.+|..++..
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~  115 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA  115 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence            3456788999877 7999999999999996 68888876                   3455666777777777766666


Q ss_pred             EEEec
Q 045749          119 VEYDF  123 (210)
Q Consensus       119 ~~~D~  123 (210)
                      +...+
T Consensus       116 ~~~~i  120 (370)
T PRK05600        116 LRERL  120 (370)
T ss_pred             eeeec
Confidence            65444

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.81  E-value=0.0092  Score=49.56  Aligned_cols=40  Identities=23%  Similarity=0.229  Sum_probs=34.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKI  103 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~~  103 (210)
                      |++++|+|+ +++|...++.+...|++ |+++++++++.+.+
T Consensus       164 g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~  204 (339)
T cd08239         164 RDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA  204 (339)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            889999986 89999999988889999 99999988776543

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.79  E-value=0.0094  Score=48.90  Aligned_cols=79  Identities=23%  Similarity=0.379  Sum_probs=52.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      |.+++|.|+++++|.++++.....|++++.+.++.++.+.+.+    .  +.. .++  +..    .....+.+.+..++
T Consensus       140 g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~----~--g~~-~~~--~~~----~~~~~~~i~~~~~~  206 (324)
T cd08292         140 GQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA----L--GIG-PVV--STE----QPGWQDKVREAAGG  206 (324)
T ss_pred             CCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh----c--CCC-EEE--cCC----CchHHHHHHHHhCC
Confidence            7899999999999999999888999999999888776554432    1  211 111  111    12223445554444


Q ss_pred             CCccEEEEcCCC
Q 045749          143 LEVGVLINNVGI  154 (210)
Q Consensus       143 ~~id~lvnnAg~  154 (210)
                      ..+|+++++.|.
T Consensus       207 ~~~d~v~d~~g~  218 (324)
T cd08292         207 APISVALDSVGG  218 (324)
T ss_pred             CCCcEEEECCCC
Confidence            468888887663

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.77  E-value=0.035  Score=45.90  Aligned_cols=117  Identities=21%  Similarity=0.260  Sum_probs=67.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCe--EEEEecCh--hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLN--LILVSRNH--NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~--Vi~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+.|+|+++.+|..++..++..|..  |++++|++  ++++....++.+........ .....+.+      .    +.+
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~d------~----~~l   70 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISSD------L----SDV   70 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECCC------H----HHh
Confidence            5789999999999999999999864  99999965  55554444443321000000 01111111      1    123


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEeccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGSG  206 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS~  206 (210)
                      .  +-|++|.++|.... +    ..+..   +.++.|..-    ++.+.+.+.+. ..+.++++++-
T Consensus        71 ~--~aDiViitag~p~~-~----~~~r~---dl~~~n~~i----~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          71 A--GSDIVIITAGVPRK-E----GMSRL---DLAKKNAKI----VKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             C--CCCEEEEecCCCCC-C----CCCHH---HHHHHHHHH----HHHHHHHHHHHCCCeEEEEeCCc
Confidence            3  57899999997432 1    23433   345555443    44444444433 45677877764

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.77  E-value=0.0069  Score=49.44  Aligned_cols=42  Identities=19%  Similarity=0.332  Sum_probs=36.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKL  100 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l  100 (210)
                      ..+.||.++|.|+++=.|+.++..|.++|++|+++.|....+
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L  196 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNL  196 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhH
Confidence            456699999999987799999999999999999998854443

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.75  E-value=0.017  Score=49.78  Aligned_cols=45  Identities=27%  Similarity=0.478  Sum_probs=38.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNE  106 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~  106 (210)
                      ..+++++|.|+ |.+|..+++.|...| .+|++++|+.++.++..++
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~  223 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE  223 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            45899999987 999999999999999 6799999998877665544

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.73  E-value=0.013  Score=48.51  Aligned_cols=59  Identities=22%  Similarity=0.390  Sum_probs=43.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEEEEeccc
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIVEYDFSC  125 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~~~D~~~  125 (210)
                      |+|.|+ ||+|-++++.|+..|. ++.++|.+                   ..+.+.+++.+++..|..++.....++++
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~   80 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD   80 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence            677776 8999999999999997 48888764                   23455566777777777777666655543

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.73  E-value=0.0056  Score=50.10  Aligned_cols=43  Identities=19%  Similarity=0.327  Sum_probs=37.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      .+++|++++|.|+ |++|+++|+.|...|++|++.+|++++.+.
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            3567999999999 679999999999999999999999876543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.71  E-value=0.027  Score=45.60  Aligned_cols=59  Identities=24%  Similarity=0.371  Sum_probs=43.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEE
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHG-LNLILVSRN-------------------HNKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      ++.+..|+|.|+ +|+|..+|+.|++.| .+++++|.+                   +.+.+...+.+.+.+|..++..+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i  105 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV  105 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence            455778888876 799999999999999 578888865                   12344556666666776666554

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.70  E-value=0.021  Score=45.22  Aligned_cols=62  Identities=26%  Similarity=0.421  Sum_probs=45.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEEE
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIVE  120 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~~  120 (210)
                      +++++++|.|+ +|+|.++++.|++.|. +++++|.+                   ..+.+...+.+.+.+|..++..+.
T Consensus         9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            44677888876 7999999999999997 68888765                   134555667777777777766665


Q ss_pred             Eec
Q 045749          121 YDF  123 (210)
Q Consensus       121 ~D~  123 (210)
                      ..+
T Consensus        88 ~~i   90 (231)
T cd00755          88 EFL   90 (231)
T ss_pred             eec
Confidence            443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.70  E-value=0.028  Score=46.76  Aligned_cols=113  Identities=15%  Similarity=0.187  Sum_probs=70.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecChhH--HHHHHHHHHhhC-CC-ceeEEEEEecccCccchhh
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL-------NLILVSRNHNK--LEKISNEIQAEN-PN-TQINIVEYDFSCDVVSAGN  132 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~-------~Vi~~~r~~~~--l~~~~~~l~~~~-~~-~~~~~~~~D~~~~~~~~~~  132 (210)
                      +.+.|+|++|.+|..+|..++.+|.       .+++.|++++.  ++..+.++.+.. +. .++     .++.       
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~-----~i~~-------   70 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEI-----VITD-------   70 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCce-----EEec-------
Confidence            4689999999999999999998875       69999996533  555555554421 10 011     1111       


Q ss_pred             HHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC--CCEEEEec
Q 045749          133 IKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK--KGAIVNIG  204 (210)
Q Consensus       133 ~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~--~g~iv~is  204 (210)
                        .-.+.+.  +-|++|.+||.... +    ..+..+   .++.|.    .+.+.+.+.+.+..  .+.++++|
T Consensus        71 --~~~~~~~--daDivvitaG~~~k-~----g~tR~d---ll~~N~----~i~~~i~~~i~~~~~~~~iiivvs  128 (322)
T cd01338          71 --DPNVAFK--DADWALLVGAKPRG-P----GMERAD---LLKANG----KIFTAQGKALNDVASRDVKVLVVG  128 (322)
T ss_pred             --CcHHHhC--CCCEEEEeCCCCCC-C----CCcHHH---HHHHHH----HHHHHHHHHHHhhCCCCeEEEEec
Confidence              1122333  57899999997532 2    234443   466664    46677777776654  56666665

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=96.69  E-value=0.011  Score=47.93  Aligned_cols=42  Identities=26%  Similarity=0.350  Sum_probs=36.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|+|+++++|.+++..+...|++|+.++++.++.+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            378999999999999999999999999999999987765543

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.68  E-value=0.0064  Score=44.31  Aligned_cols=45  Identities=16%  Similarity=0.272  Sum_probs=39.0

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      ..++.||.++|-|.+.-.|+.++..|.++|++|.+++++...+++
T Consensus        23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            346679999999999999999999999999999999876655544

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=96.65  E-value=0.021  Score=46.20  Aligned_cols=42  Identities=21%  Similarity=0.259  Sum_probs=36.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|.|+++++|.+.++.....|++|+.+++++++.+.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            378999999999999999998889999999999887765543

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.64  E-value=0.013  Score=44.45  Aligned_cols=43  Identities=28%  Similarity=0.319  Sum_probs=35.8

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE  101 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~  101 (210)
                      ..++.|+++.|.|. |.||+++|+.+..-|++|+..+|......
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            34577999999976 89999999999999999999999876543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=96.63  E-value=0.011  Score=41.86  Aligned_cols=68  Identities=26%  Similarity=0.333  Sum_probs=46.8

Q ss_pred             hHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCccEEEEcCC
Q 045749           74 GIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVG  153 (210)
Q Consensus        74 GiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~id~lvnnAg  153 (210)
                      |+|...++-....|++|+++++++++++.+.    +.  +...   ..|..++    +..+++.+..++..+|++|+|+|
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~----~~--Ga~~---~~~~~~~----~~~~~i~~~~~~~~~d~vid~~g   67 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK----EL--GADH---VIDYSDD----DFVEQIRELTGGRGVDVVIDCVG   67 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH----HT--TESE---EEETTTS----SHHHHHHHHTTTSSEEEEEESSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH----hh--cccc---ccccccc----ccccccccccccccceEEEEecC
Confidence            6899888888889999999999988865443    22  2111   1333333    24566766666557999999998


Q ss_pred             C
Q 045749          154 I  154 (210)
Q Consensus       154 ~  154 (210)
                      .
T Consensus        68 ~   68 (130)
T PF00107_consen   68 S   68 (130)
T ss_dssp             S
T ss_pred             c
Confidence            3

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=96.63  E-value=0.014  Score=47.86  Aligned_cols=79  Identities=19%  Similarity=0.397  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|.+++|.|+++++|.++++.....|++++++.+++++.+.+ +++     +.. .+  .+..    .....+++.+...
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~--~~~~----~~~~~~~~~~~~~  204 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL-----GAD-EV--IDSS----PEDLAQRVKEATG  204 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc-----CCC-EE--eccc----chhHHHHHHHHhc
Confidence            378999999999999999999999999999999888765443 222     111 01  1111    1123344544444


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      +..+|.++++.|
T Consensus       205 ~~~~d~vl~~~g  216 (323)
T cd05282         205 GAGARLALDAVG  216 (323)
T ss_pred             CCCceEEEECCC
Confidence            346888888765

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.62  E-value=0.028  Score=49.11  Aligned_cols=80  Identities=20%  Similarity=0.262  Sum_probs=54.4

Q ss_pred             cCCcEEEEEcCC----------------ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecc
Q 045749           61 SYGSWALITGAT----------------DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS  124 (210)
Q Consensus        61 ~~gk~vlITGas----------------sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~  124 (210)
                      +.||.++||+|.                |-.|.++|+.++.+|++|++++-... +       .  . ...+..+.++  
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~-------~--~-p~~v~~i~V~--  320 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L-------A--D-PQGVKVIHVE--  320 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C-------C--C-CCCceEEEec--
Confidence            679999999874                36799999999999999999874321 1       0  1 2234444332  


Q ss_pred             cCccchhhHHHHHHHhcCCCccEEEEcCCCCCCCc
Q 045749          125 CDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKA  159 (210)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~  159 (210)
                         +..+..+.+.+.++   .|++|.+|.+....+
T Consensus       321 ---ta~eM~~av~~~~~---~Di~I~aAAVaDyrp  349 (475)
T PRK13982        321 ---SARQMLAAVEAALP---ADIAIFAAAVADWRV  349 (475)
T ss_pred             ---CHHHHHHHHHhhCC---CCEEEEeccccceee
Confidence               33444455555543   689999999877654

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.62  E-value=0.0091  Score=45.40  Aligned_cols=43  Identities=26%  Similarity=0.470  Sum_probs=35.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHh
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQA  109 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~  109 (210)
                      |.|.|| |-+|+.+|..++..|++|.+.+++++.+++..+.++.
T Consensus         2 V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    2 VAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             EEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            567777 8999999999999999999999999888776665543

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.61  E-value=0.017  Score=49.88  Aligned_cols=46  Identities=26%  Similarity=0.510  Sum_probs=39.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l  107 (210)
                      ..+++++|.|+ |++|..+++.+...|+ +|++++|+.++.++..+++
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            45889999987 9999999999999997 7999999988877665543

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.61  E-value=0.029  Score=43.36  Aligned_cols=62  Identities=29%  Similarity=0.418  Sum_probs=44.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCh---------------------hHHHHHHHHHHhhCCCceeEE
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNH---------------------NKLEKISNEIQAENPNTQINI  118 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~---------------------~~l~~~~~~l~~~~~~~~~~~  118 (210)
                      +++.+|+|.|+ +|+|.++++.|++.|.. ++++|.+.                     .+.+.+.+.+++.+|..++..
T Consensus        17 L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            45677888876 56999999999999975 88887641                     234455667777777777766


Q ss_pred             EEEec
Q 045749          119 VEYDF  123 (210)
Q Consensus       119 ~~~D~  123 (210)
                      +..+.
T Consensus        96 ~~~~~  100 (198)
T cd01485          96 VEEDS  100 (198)
T ss_pred             Eeccc
Confidence            65443

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=96.60  E-value=0.013  Score=48.27  Aligned_cols=78  Identities=15%  Similarity=0.333  Sum_probs=49.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +++++++||++++|...++.....|++|+.+++++++.+.+.+ +     +... +  .|...    .+..+.+.+..++
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~-----g~~~-~--i~~~~----~~~~~~v~~~~~~  210 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-I-----GAEY-V--LNSSD----PDFLEDLKELIAK  210 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCcE-E--EECCC----ccHHHHHHHHhCC
Confidence            4556666999999999887777789999999998877655432 1     2211 1  12211    1223445444443


Q ss_pred             CCccEEEEcCC
Q 045749          143 LEVGVLINNVG  153 (210)
Q Consensus       143 ~~id~lvnnAg  153 (210)
                      ..+|+++++.|
T Consensus       211 ~~~d~vid~~g  221 (324)
T cd08291         211 LNATIFFDAVG  221 (324)
T ss_pred             CCCcEEEECCC
Confidence            35888888766

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.59  E-value=0.026  Score=43.59  Aligned_cols=62  Identities=21%  Similarity=0.401  Sum_probs=46.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC-------------------hhHHHHHHHHHHhhCCCceeEE
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRN-------------------HNKLEKISNEIQAENPNTQINI  118 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~  118 (210)
                      .++.+++|+|.|+ +|+|.++++.|+..|.. +.++|.+                   +.+.+.+++.+++.+|..++..
T Consensus        17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~   95 (197)
T cd01492          17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSV   95 (197)
T ss_pred             HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEE
Confidence            3455778888875 67999999999999985 8888754                   2345666777888887777666


Q ss_pred             EEE
Q 045749          119 VEY  121 (210)
Q Consensus       119 ~~~  121 (210)
                      ...
T Consensus        96 ~~~   98 (197)
T cd01492          96 DTD   98 (197)
T ss_pred             Eec
Confidence            543

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=96.58  E-value=0.03  Score=45.89  Aligned_cols=57  Identities=19%  Similarity=0.321  Sum_probs=40.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecC---------------------hhHHHHHHHHHHhhCCCceeEEEEEec
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL-NLILVSRN---------------------HNKLEKISNEIQAENPNTQINIVEYDF  123 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~---------------------~~~l~~~~~~l~~~~~~~~~~~~~~D~  123 (210)
                      |+|.|+ +|+|-.+|+.|++.|. +++++|.+                     ..+.+.+++.+++.+|..++..+...+
T Consensus         2 VLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v~~~~~~I   80 (307)
T cd01486           2 CLLLGA-GTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDATGIVLSI   80 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEEEEeeeec
Confidence            566665 7999999999999997 47777653                     124455666777777777776665443

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.57  E-value=0.026  Score=44.82  Aligned_cols=58  Identities=22%  Similarity=0.418  Sum_probs=41.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEEEEecc
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIVEYDFS  124 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~~~D~~  124 (210)
                      ++|.| .||+|-++++.|+..|. ++.++|.+                   +.+.+.+.+.+++.+|+.++.....+++
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            56666 58999999999999997 48888775                   2344555666777777777766655543

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=96.56  E-value=0.018  Score=47.26  Aligned_cols=42  Identities=24%  Similarity=0.361  Sum_probs=36.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|.+++|.|+++++|.++++.....|++++++.+++++.+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            378999999999999999999999999988888887765544

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.56  E-value=0.017  Score=48.83  Aligned_cols=41  Identities=22%  Similarity=0.301  Sum_probs=33.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|.|+ +++|...++.....|+ +|+++++++++++-+
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a  232 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA  232 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH
Confidence            3789999985 8999998887778899 599999988876543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=96.56  E-value=0.011  Score=44.57  Aligned_cols=120  Identities=17%  Similarity=0.118  Sum_probs=71.4

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      ++.++.+.++|.||++--|..+.+++++.+-  +|+++.|.+..-.+.         +..+.....|++.-       ++
T Consensus        13 Df~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at---------~k~v~q~~vDf~Kl-------~~   76 (238)
T KOG4039|consen   13 DFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT---------DKVVAQVEVDFSKL-------SQ   76 (238)
T ss_pred             HHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc---------cceeeeEEechHHH-------HH
Confidence            4566788999999999999999999999873  699999875221110         23333344444322       33


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ......  .+|+++++-|....+.+.-..... |.+..++        +.++    -++.+..+++.+||..+
T Consensus        77 ~a~~~q--g~dV~FcaLgTTRgkaGadgfykv-DhDyvl~--------~A~~----AKe~Gck~fvLvSS~GA  134 (238)
T KOG4039|consen   77 LATNEQ--GPDVLFCALGTTRGKAGADGFYKV-DHDYVLQ--------LAQA----AKEKGCKTFVLVSSAGA  134 (238)
T ss_pred             HHhhhc--CCceEEEeecccccccccCceEee-chHHHHH--------HHHH----HHhCCCeEEEEEeccCC
Confidence            333333  488999998876554321111111 1111221        2222    24455668999999865

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=96.55  E-value=0.024  Score=47.00  Aligned_cols=78  Identities=23%  Similarity=0.421  Sum_probs=52.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +.+++|.|+++++|.++++.+...|++|+.+.+++++.+.+ +++     +... +  .+..+    ....+++.+..++
T Consensus       166 ~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~-v--~~~~~----~~~~~~~~~~~~~  232 (341)
T cd08297         166 GDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL-----GADA-F--VDFKK----SDDVEAVKELTGG  232 (341)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc-----CCcE-E--EcCCC----ccHHHHHHHHhcC
Confidence            78999999999999999999999999999999998765543 222     2111 1  11111    1233455554444


Q ss_pred             CCccEEEEcCC
Q 045749          143 LEVGVLINNVG  153 (210)
Q Consensus       143 ~~id~lvnnAg  153 (210)
                      ..+|.++++.+
T Consensus       233 ~~vd~vl~~~~  243 (341)
T cd08297         233 GGAHAVVVTAV  243 (341)
T ss_pred             CCCCEEEEcCC
Confidence            46888887554

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK07411 hypothetical protein; Validated

Probab=96.55  E-value=0.022  Score=48.69  Aligned_cols=64  Identities=27%  Similarity=0.400  Sum_probs=48.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEE
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      +++..+|+|.|+ +|+|-.+++.|++.|. +++++|.+                   ..+.+.+++.+++.+|..++..+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            456788999877 7999999999999997 58888764                   23556677788888777777776


Q ss_pred             EEecc
Q 045749          120 EYDFS  124 (210)
Q Consensus       120 ~~D~~  124 (210)
                      ...++
T Consensus       114 ~~~~~  118 (390)
T PRK07411        114 ETRLS  118 (390)
T ss_pred             ecccC
Confidence            65443

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.54  E-value=0.075  Score=44.19  Aligned_cols=117  Identities=14%  Similarity=0.199  Sum_probs=68.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+.+.|.|| |.+|..++..++..| +.+++.|++++.++...-++.........   ...+...    ...+    .+.
T Consensus         5 ~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~---~~~i~~~----~d~~----~l~   72 (319)
T PTZ00117          5 RKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGS---NINILGT----NNYE----DIK   72 (319)
T ss_pred             CcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCC---CeEEEeC----CCHH----HhC
Confidence            567889997 889999999999998 78999999987655433333221100000   0011100    0112    233


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGS  205 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS  205 (210)
                        +-|++|.+||.... +    ..+.+   +.+..|.    .+.+.+.+.|.+.. ++.++++|-
T Consensus        73 --~ADiVVitag~~~~-~----g~~r~---dll~~n~----~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         73 --DSDVVVITAGVQRK-E----EMTRE---DLLTING----KIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             --CCCEEEECCCCCCC-C----CCCHH---HHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence              47899999997533 1    22333   3556665    45666666666554 444666553

>PLN00203 glutamyl-tRNA reductase

Probab=96.54  E-value=0.036  Score=49.11  Aligned_cols=46  Identities=22%  Similarity=0.501  Sum_probs=40.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l  107 (210)
                      +.++.++|.|+ |++|+.+++.|...|+ +|++++|+.++.+++.+++
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            55899999999 9999999999999997 6999999998887766554

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=96.53  E-value=0.017  Score=48.55  Aligned_cols=79  Identities=27%  Similarity=0.363  Sum_probs=49.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|.|+ +++|...++.....|++ |+.+++++++++.+. ++     +.. .+  .|..++    +..+.+.+..
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~-----Ga~-~~--i~~~~~----~~~~~i~~~~  241 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EF-----GAT-HT--VNSSGT----DPVEAIRALT  241 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCc-eE--EcCCCc----CHHHHHHHHh
Confidence            3789999975 99999998888888995 889999887765442 22     211 11  122111    2223444444


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++..+|+++.+.|.
T Consensus       242 ~~~g~d~vid~~g~  255 (358)
T TIGR03451       242 GGFGADVVIDAVGR  255 (358)
T ss_pred             CCCCCCEEEECCCC
Confidence            43357888888774

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.49  E-value=0.068  Score=46.36  Aligned_cols=114  Identities=12%  Similarity=0.165  Sum_probs=74.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-------CC--eEEEEecChhHHHHHHHHHHhhC-CCceeEEEEEecccCccchhhH
Q 045749           64 SWALITGATDGIGKAFAHQLAQH-------GL--NLILVSRNHNKLEKISNEIQAEN-PNTQINIVEYDFSCDVVSAGNI  133 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~-------G~--~Vi~~~r~~~~l~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~  133 (210)
                      -.+.|+|++|.+|.++|..++.+       |.  +++++|+++++++..+-++.+.. +-.. .   ..+...       
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~-~---v~i~~~-------  169 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLR-E---VSIGID-------  169 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcC-c---eEEecC-------
Confidence            36889999999999999999988       64  69999999999988888887642 1110 0   111111       


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh--CCCCEEEEec
Q 045749          134 KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR--RKKGAIVNIG  204 (210)
Q Consensus       134 ~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~--~~~g~iv~is  204 (210)
                        -.+.+.  +-|++|..||.... +    ..+..+   .++.|.    .+.+...+.+.+  ...+.||++|
T Consensus       170 --~ye~~k--daDiVVitAG~prk-p----G~tR~d---Ll~~N~----~I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        170 --PYEVFQ--DAEWALLIGAKPRG-P----GMERAD---LLDING----QIFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             --CHHHhC--cCCEEEECCCCCCC-C----CCCHHH---HHHHHH----HHHHHHHHHHHHhcCCCeEEEEcC
Confidence              012233  57899999997532 2    234443   566664    456666666666  3456777665

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=96.49  E-value=0.022  Score=47.61  Aligned_cols=78  Identities=23%  Similarity=0.265  Sum_probs=50.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+|+ +++|...++.....|+ +|+++++++++.+.+ .++     +...   ..|..+    .+..+.+.+..
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~-----ga~~---~i~~~~----~~~~~~l~~~~  237 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL-----GATI---VLDPTE----VDVVAEVRKLT  237 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCCE---EECCCc----cCHHHHHHHHh
Confidence            4789999985 7999999988889999 788888888776543 222     2111   112222    12334454444


Q ss_pred             cCCCccEEEEcCC
Q 045749          141 DGLEVGVLINNVG  153 (210)
Q Consensus       141 ~~~~id~lvnnAg  153 (210)
                      ++..+|++++++|
T Consensus       238 ~~~~~d~vid~~g  250 (351)
T cd08233         238 GGGGVDVSFDCAG  250 (351)
T ss_pred             CCCCCCEEEECCC
Confidence            4335888988876

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.48  E-value=0.016  Score=43.22  Aligned_cols=44  Identities=18%  Similarity=0.374  Sum_probs=34.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      .++.||.++|.|.|.-+|+.++..|.++|++|.++..+.+.+++
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~   75 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE   75 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence            45779999999999999999999999999999998877655544

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.46  E-value=0.03  Score=47.31  Aligned_cols=41  Identities=22%  Similarity=0.257  Sum_probs=34.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|+|+ +++|...++.....|+ +|+.+++++++++.+
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a  226 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA  226 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            3789999985 8999999888878898 799999988876654

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK08328 hypothetical protein; Provisional

Probab=96.46  E-value=0.038  Score=43.77  Aligned_cols=37  Identities=24%  Similarity=0.406  Sum_probs=30.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN   96 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~   96 (210)
                      .++.+++|+|.|+ +|+|.++++.|++.|. +++++|.+
T Consensus        23 ~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         23 EKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            3456788999877 6999999999999997 58888864

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.44  E-value=0.011  Score=48.21  Aligned_cols=43  Identities=14%  Similarity=0.305  Sum_probs=37.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE  101 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~  101 (210)
                      .++.||.++|.|+|.=.|+.++..|.++|++|+++.++...++
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~  196 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMA  196 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence            4567999999999999999999999999999999988765443

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.44  E-value=0.029  Score=48.03  Aligned_cols=63  Identities=24%  Similarity=0.387  Sum_probs=46.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEE
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      ++.+.+|+|.|+ +|+|..+++.|++.|. +++++|.+                   ..+.+.+++.+++.+|..++..+
T Consensus        39 ~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~  117 (392)
T PRK07878         39 RLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH  117 (392)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence            355778899877 7999999999999997 58888764                   23455666777777777776655


Q ss_pred             EEec
Q 045749          120 EYDF  123 (210)
Q Consensus       120 ~~D~  123 (210)
                      ...+
T Consensus       118 ~~~i  121 (392)
T PRK07878        118 EFRL  121 (392)
T ss_pred             eccC
Confidence            5433

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=96.44  E-value=0.098  Score=39.04  Aligned_cols=114  Identities=11%  Similarity=0.082  Sum_probs=67.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccC--ccchhhHHHHHHHhc
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD--VVSAGNIKAIEMAID  141 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~  141 (210)
                      ..|+|-||-+.+|.++++.|-.+++-|.-+|..+.+-.           +..+   .+|-.+.  +..+...+++.+.+.
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----------d~sI---~V~~~~swtEQe~~v~~~vg~sL~   69 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----------DSSI---LVDGNKSWTEQEQSVLEQVGSSLQ   69 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----------cceE---EecCCcchhHHHHHHHHHHHHhhc
Confidence            46899999999999999999999999888877653210           1111   1222221  122223355556666


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHh
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGM  192 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m  192 (210)
                      +.++|.+++-||.+..+...-.++ .+..+-++.-.+.....-.+.+-.++
T Consensus        70 gekvDav~CVAGGWAGGnAksKdl-~KNaDLMwKQSvwtSaIsa~lAt~HL  119 (236)
T KOG4022|consen   70 GEKVDAVFCVAGGWAGGNAKSKDL-VKNADLMWKQSVWTSAISAKLATTHL  119 (236)
T ss_pred             ccccceEEEeeccccCCCcchhhh-hhchhhHHHHHHHHHHHHHHHHHhcc
Confidence            668999999999776543211111 12223355555555544445544444

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.41  E-value=0.039  Score=46.15  Aligned_cols=41  Identities=22%  Similarity=0.452  Sum_probs=35.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|.|+ +++|...++.....|++|+++++++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            3889999999 9999999888888999999999998876644

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.40  E-value=0.021  Score=46.96  Aligned_cols=42  Identities=24%  Similarity=0.278  Sum_probs=36.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|.|+++++|.++++.....|++|+.+.+++++.+.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL  180 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH
Confidence            378999999999999999888888999999999887765543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=96.39  E-value=0.037  Score=47.24  Aligned_cols=41  Identities=29%  Similarity=0.287  Sum_probs=35.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      .|.+++|+|+++++|.++++.+...|++++++++++++.+.
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~  229 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEY  229 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence            37899999999999999998888899999888887765543

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PLN02740 Alcohol dehydrogenase-like

Probab=96.38  E-value=0.029  Score=47.59  Aligned_cols=41  Identities=34%  Similarity=0.340  Sum_probs=34.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|.|+ +++|...++.....|+ +|+.+++++++++.+
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a  239 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG  239 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH
Confidence            4889999986 8999999888888999 599999988876654

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.36  E-value=0.24  Score=40.98  Aligned_cols=112  Identities=16%  Similarity=0.304  Sum_probs=70.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCC---CceeEEEEEecccCccchhhHHHHHHHh
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENP---NTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.|.|+ |.+|..+|..++.+|.  .+++.|.+++.++....++....+   ..++....    .+          .+.+
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~----~~----------y~~~   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA----GD----------YDDC   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE----CC----------HHHh
Confidence            567787 9999999999998875  599999999888887777766422   11222211    11          2233


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCC-CEEEEec
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK-GAIVNIG  204 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~-g~iv~is  204 (210)
                      .  +-|++|..||.... +    ..+.+ =.+.++.|    ..+.+...|.+.+.+. +.++++|
T Consensus        67 ~--~aDivvitaG~~~k-p----g~tr~-R~dll~~N----~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          67 A--DADIIVITAGPSID-P----GNTDD-RLDLAQTN----AKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             C--CCCEEEECCCCCCC-C----CCCch-HHHHHHHH----HHHHHHHHHHHHHhCCCeEEEEec
Confidence            3  57899999997532 2    22311 12345555    4567777777776653 4555444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.36  E-value=0.05  Score=46.57  Aligned_cols=47  Identities=21%  Similarity=0.420  Sum_probs=41.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQ  108 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~  108 (210)
                      +.+++++|.|| |-+|.-.|++|+++| .+|+++.|+.++.+++++++.
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            56899999988 679999999999999 569999999999998887764

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=96.32  E-value=0.046  Score=46.93  Aligned_cols=44  Identities=16%  Similarity=0.215  Sum_probs=35.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecChhHHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL---NLILVSRNHNKLEKISN  105 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~---~Vi~~~r~~~~l~~~~~  105 (210)
                      .|.+++|.||++++|...++.....|+   +|+++++++++++.+.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~  221 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR  221 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence            478999999999999998776655554   79999999988775543

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.31  E-value=0.031  Score=45.90  Aligned_cols=41  Identities=24%  Similarity=0.386  Sum_probs=36.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      +++++|.|+++++|.++++.....|++|+.+++++++.+.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            67999999999999999988889999999999998776544

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=96.30  E-value=0.028  Score=46.23  Aligned_cols=79  Identities=16%  Similarity=0.237  Sum_probs=51.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|.+++|.||++++|.++++.....|++|+.+++++++.+.+ +++     +.. ..  .+...    ....+.+.+..+
T Consensus       140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~-----g~~-~~--~~~~~----~~~~~~~~~~~~  206 (327)
T PRK10754        140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKA-----GAW-QV--INYRE----ENIVERVKEITG  206 (327)
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHC-----CCC-EE--EcCCC----CcHHHHHHHHcC
Confidence            478999999999999999988888999999999887765443 221     211 11  11111    122344444444


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      +..+|+++++.|
T Consensus       207 ~~~~d~vl~~~~  218 (327)
T PRK10754        207 GKKVRVVYDSVG  218 (327)
T ss_pred             CCCeEEEEECCc
Confidence            346888888765

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.29  E-value=0.014  Score=47.38  Aligned_cols=44  Identities=23%  Similarity=0.333  Sum_probs=37.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEI  107 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~~~~~l  107 (210)
                      ++.++|.|+ ||-+++++..|++.|+. |.+++|+.++.+++.+++
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            467888886 99999999999999985 999999998887766543

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.28  E-value=0.12  Score=43.30  Aligned_cols=39  Identities=26%  Similarity=0.202  Sum_probs=34.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK   99 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~   99 (210)
                      .+.|+++.|.|. |.||+++|+.+...|++|+..+|+++.
T Consensus       143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            467999999976 679999999999999999999998754

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=96.27  E-value=0.026  Score=46.71  Aligned_cols=37  Identities=27%  Similarity=0.510  Sum_probs=32.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~   98 (210)
                      .|++++|.|+++++|.++++.....|++++.+.++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            3789999999999999999998899999988887654

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.26  E-value=0.088  Score=43.85  Aligned_cols=112  Identities=17%  Similarity=0.208  Sum_probs=69.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCh--hHHHHHHHHHHhhC-CCc-eeEEEEEecccCccchhhH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL-------NLILVSRNH--NKLEKISNEIQAEN-PNT-QINIVEYDFSCDVVSAGNI  133 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~-------~Vi~~~r~~--~~l~~~~~~l~~~~-~~~-~~~~~~~D~~~~~~~~~~~  133 (210)
                      .+.|+|++|.+|..+|..+..+|.       .+++.|+++  ++++....++.+.. +.. ...     ++         
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~---------   70 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-----AT---------   70 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-----Ee---------
Confidence            588999999999999999998874       799999965  44666666665432 110 000     11         


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC--CCEEEEec
Q 045749          134 KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK--KGAIVNIG  204 (210)
Q Consensus       134 ~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~--~g~iv~is  204 (210)
                      ..-.+.+.  +-|++|..||.... +    ..+.++   .++.|.    .+.+.+.+.+.+..  .+.++++|
T Consensus        71 ~~~~~~~~--daDvVVitAG~~~k-~----g~tR~d---ll~~Na----~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        71 TDPEEAFK--DVDAALLVGAFPRK-P----GMERAD---LLSKNG----KIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             cChHHHhC--CCCEEEEeCCCCCC-C----CCcHHH---HHHHHH----HHHHHHHHHHHhhCCCCeEEEEeC
Confidence            01122333  47899999997532 2    234443   566664    45566666666553  56666665

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=96.26  E-value=0.056  Score=45.94  Aligned_cols=42  Identities=29%  Similarity=0.321  Sum_probs=36.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|.+++|+|+++++|.+.+......|++++++++++++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            378999999999999999988888999998898888776544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.25  E-value=0.019  Score=44.94  Aligned_cols=43  Identities=30%  Similarity=0.401  Sum_probs=37.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      ++.|.||++.+|.++++.|++.|++|++.+|++++.++..++.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            4788999999999999999999999999999998877765543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.24  E-value=0.16  Score=41.75  Aligned_cols=112  Identities=18%  Similarity=0.244  Sum_probs=69.2

Q ss_pred             EEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           67 LITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        67 lITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      .|.|+ +++|..+|..++.+|  .+++++|+++++++....++.+......  ......+.+          .+.+.  +
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~--~~~i~~~~~----------~~~l~--~   66 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLA--TGTIVRGGD----------YADAA--D   66 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccC--CCeEEECCC----------HHHhC--C
Confidence            46676 679999999999988  5799999999988888888876532100  001111111          12333  4


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGS  205 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS  205 (210)
                      -|++|.+||.... +    ..+..   +.+..|.    .+.+.+.+.+.+. .++.++++|-
T Consensus        67 aDiVIitag~p~~-~----~~~R~---~l~~~n~----~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          67 ADIVVITAGAPRK-P----GETRL---DLINRNA----PILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             CCEEEEcCCCCCC-C----CCCHH---HHHHHHH----HHHHHHHHHHHHhCCCeEEEEccC
Confidence            7899999997532 1    22333   2444453    4555566655554 3567777664

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>smart00829 PKS_ER Enoylreductase

Probab=96.24  E-value=0.034  Score=44.26  Aligned_cols=42  Identities=21%  Similarity=0.305  Sum_probs=36.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|.+++|.|+++++|..++......|++|+.+++++++.+.+
T Consensus       104 ~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  145 (288)
T smart00829      104 PGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFL  145 (288)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            378999999999999999888888999999999988776544

Enoylreductase in Polyketide synthases.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=96.22  E-value=0.048  Score=45.67  Aligned_cols=82  Identities=16%  Similarity=0.202  Sum_probs=50.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+| ++++|..+++.....|+ +|+++++++++.+.+ +++     +.. .+  .|..+. ...+..+.+.+..
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~-----g~~-~v--i~~~~~-~~~~~~~~i~~~~  245 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REF-----GAD-AT--IDIDEL-PDPQRRAIVRDIT  245 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCC-eE--EcCccc-ccHHHHHHHHHHh
Confidence            488999997 59999999988888999 899999887765433 222     211 11  122111 1111123444444


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++..+|+++++.|.
T Consensus       246 ~~~~~d~vid~~g~  259 (361)
T cd08231         246 GGRGADVVIEASGH  259 (361)
T ss_pred             CCCCCcEEEECCCC
Confidence            43468999988764

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.22  E-value=0.038  Score=46.63  Aligned_cols=80  Identities=18%  Similarity=0.156  Sum_probs=50.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|.|+ +++|...++.+...|+ +|+.+++++++++.+ +++     +... +  .|..++.  ++..+.+.+..
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-----Ga~~-~--i~~~~~~--~~~~~~v~~~~  253 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-----GATD-C--VNPKDHD--KPIQQVLVEMT  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCCE-E--Ecccccc--hHHHHHHHHHh
Confidence            3889999975 8999999988888999 699999998876644 222     2211 1  1222110  11223343333


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++ .+|+++.+.|.
T Consensus       254 ~~-g~d~vid~~g~  266 (368)
T cd08300         254 DG-GVDYTFECIGN  266 (368)
T ss_pred             CC-CCcEEEECCCC
Confidence            33 58899988773

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.22  E-value=0.069  Score=44.25  Aligned_cols=112  Identities=20%  Similarity=0.315  Sum_probs=65.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      +.|+|+++.+|..+|..++.+|.  .+++.|+++  .+....++.+..  .......  .+.+       ....+.+.  
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~--~~~~i~~--~~~~-------~~~~~~~~--   66 (312)
T TIGR01772         2 VAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIP--TAASVKG--FSGE-------EGLENALK--   66 (312)
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCC--cCceEEE--ecCC-------CchHHHcC--
Confidence            67999999999999999998875  699999986  222222333211  0011110  0001       01223344  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                      +-|++|..||.... +    ..+.+   +.++.|+.    +.+...+.+.+.. .+.++++|
T Consensus        67 daDivvitaG~~~~-~----g~~R~---dll~~N~~----I~~~i~~~i~~~~p~~iiivvs  116 (312)
T TIGR01772        67 GADVVVIPAGVPRK-P----GMTRD---DLFNVNAG----IVKDLVAAVAESCPKAMILVIT  116 (312)
T ss_pred             CCCEEEEeCCCCCC-C----CccHH---HHHHHhHH----HHHHHHHHHHHhCCCeEEEEec
Confidence            58899999997532 2    22333   35677765    6666666665554 45666665

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.22  E-value=0.063  Score=43.68  Aligned_cols=42  Identities=21%  Similarity=0.275  Sum_probs=36.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|.|+++++|.++++.....|++|+.+.+++++.+.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  183 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL  183 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            378999999999999999999989999999999887765443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK04148 hypothetical protein; Provisional

Probab=96.21  E-value=0.017  Score=41.64  Aligned_cols=54  Identities=19%  Similarity=0.208  Sum_probs=41.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      ++.+++.|.+  .|.++|..|++.|++|+.+|.+++..++..+.        .+.++..|+.++
T Consensus        17 ~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~--------~~~~v~dDlf~p   70 (134)
T PRK04148         17 NKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL--------GLNAFVDDLFNP   70 (134)
T ss_pred             CCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--------CCeEEECcCCCC
Confidence            5678999987  77888999999999999999999876554322        245566666554

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=96.21  E-value=0.047  Score=44.20  Aligned_cols=40  Identities=23%  Similarity=0.295  Sum_probs=33.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEK  102 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~  102 (210)
                      .|++++|.|+ +++|...++.....|++ |+++++++++++.
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~  160 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL  160 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            4889999986 89999988888888997 8888888776543

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK05442 malate dehydrogenase; Provisional

Probab=96.19  E-value=0.064  Score=44.75  Aligned_cols=113  Identities=16%  Similarity=0.197  Sum_probs=70.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecChh--HHHHHHHHHHhhC-CC-ceeEEEEEecccCccchhh
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL-------NLILVSRNHN--KLEKISNEIQAEN-PN-TQINIVEYDFSCDVVSAGN  132 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~-------~Vi~~~r~~~--~l~~~~~~l~~~~-~~-~~~~~~~~D~~~~~~~~~~  132 (210)
                      +.+.|+|++|.+|..+|..++.+|.       .+++.|++++  +++..+.++.+.. +. .++.     ++.       
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-----i~~-------   72 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-----ITD-------   72 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-----Eec-------
Confidence            4688999999999999999988764       6999999643  3555555554431 11 0111     111       


Q ss_pred             HHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh-C-CCCEEEEec
Q 045749          133 IKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR-R-KKGAIVNIG  204 (210)
Q Consensus       133 ~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~-~-~~g~iv~is  204 (210)
                        .-.+.+.  +-|++|.+||.... +    ..+.++   .++.|.    .+.+.+.+.+.+ . ..+.++++|
T Consensus        73 --~~y~~~~--daDiVVitaG~~~k-~----g~tR~d---ll~~Na----~i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         73 --DPNVAFK--DADVALLVGARPRG-P----GMERKD---LLEANG----AIFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             --ChHHHhC--CCCEEEEeCCCCCC-C----CCcHHH---HHHHHH----HHHHHHHHHHHHhCCCCeEEEEeC
Confidence              1123333  57899999997432 2    224443   566664    466777777766 3 367777776

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.16  E-value=0.37  Score=40.13  Aligned_cols=120  Identities=17%  Similarity=0.223  Sum_probs=68.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCC--CceeEEEEEecccCccchhhHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+.+.|.|| |.+|..+|..++..|. .|+++|++++.++....++.....  +....+.   .+.+      .+    .
T Consensus         6 ~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~---~~~d------~~----~   71 (321)
T PTZ00082          6 RRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVI---GTNN------YE----D   71 (321)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEE---ECCC------HH----H
Confidence            357888895 7799999999999994 899999998865432222222100  1111111   1111      11    2


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGS  205 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS  205 (210)
                      +.  +-|++|++||........-.+.+.   ++.+..|.    .+.+.+.+.+.+.. ++.++++|-
T Consensus        72 l~--~aDiVI~tag~~~~~~~~~~~~~r---~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         72 IA--GSDVVIVTAGLTKRPGKSDKEWNR---DDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             hC--CCCEEEECCCCCCCCCCCcCCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence            33  578999999986432110011133   33455563    46677777776654 446666653

>PRK07877 hypothetical protein; Provisional

Probab=96.13  E-value=0.035  Score=50.99  Aligned_cols=65  Identities=23%  Similarity=0.288  Sum_probs=49.6

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecC------------------hhHHHHHHHHHHhhCCCceeE
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGL--NLILVSRN------------------HNKLEKISNEIQAENPNTQIN  117 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~------------------~~~l~~~~~~l~~~~~~~~~~  117 (210)
                      ..++++++|+|.|+  |+|-.+|..|++.|.  +++++|.+                  ..|.+.+++.+.+.+|..++.
T Consensus       102 Q~~L~~~~V~IvG~--GlGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~  179 (722)
T PRK07877        102 QERLGRLRIGVVGL--SVGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVE  179 (722)
T ss_pred             HHHHhcCCEEEEEe--cHHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEE
Confidence            34466889999999  499999999999994  79888875                  345556667777777777777


Q ss_pred             EEEEecc
Q 045749          118 IVEYDFS  124 (210)
Q Consensus       118 ~~~~D~~  124 (210)
                      .+...++
T Consensus       180 ~~~~~i~  186 (722)
T PRK07877        180 VFTDGLT  186 (722)
T ss_pred             EEeccCC
Confidence            7765544

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.12  E-value=0.086  Score=44.10  Aligned_cols=39  Identities=28%  Similarity=0.436  Sum_probs=34.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK   99 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~   99 (210)
                      .+.||++.|.|. |.||+++|+.+...|++|+..+|+...
T Consensus       147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~  185 (333)
T PRK13243        147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP  185 (333)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            467999999988 899999999999999999999987543

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.11  E-value=0.046  Score=45.22  Aligned_cols=46  Identities=26%  Similarity=0.474  Sum_probs=38.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      +.+++++|.|+ |.+|+.+++.+...| .+|++++|++++.++..+++
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~  222 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL  222 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence            45889999987 999999999999876 46999999988877766554

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.10  E-value=0.018  Score=45.48  Aligned_cols=36  Identities=28%  Similarity=0.346  Sum_probs=32.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCe---EEEEecC
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLN---LILVSRN   96 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~---Vi~~~r~   96 (210)
                      ++.+++++|.|| ||.|+++++.|.+.|.+   +.+++|+
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            455889999998 89999999999999985   9999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.10  E-value=0.016  Score=46.57  Aligned_cols=35  Identities=20%  Similarity=0.352  Sum_probs=31.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKL  100 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l  100 (210)
                      .++|+||++- |+.++++|.++|++|+.+.+++...
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~   36 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK   36 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcc
Confidence            5899999987 9999999999999999998887643

This enzyme was found to be a monomer by gel filtration.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.09  E-value=0.19  Score=41.56  Aligned_cols=114  Identities=17%  Similarity=0.283  Sum_probs=66.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .+.|+|++|.+|.++|..++.+|.  .++++|++  +++...-++.+.....++  ..  .+.+       ..+.+.+. 
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i--~~--~~~~-------~~~y~~~~-   67 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKV--TG--YLGP-------EELKKALK-   67 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceE--EE--ecCC-------CchHHhcC-
Confidence            478899999999999999998884  69999998  444444445432111111  10  1011       01233344 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGS  205 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS  205 (210)
                       +-|++|.+||.... +    ..+..   +.++.|..-    .+...+.+.+. ..+.++++|-
T Consensus        68 -daDivvitaG~~~k-~----g~tR~---dll~~N~~i----~~~i~~~i~~~~p~a~vivvtN  118 (310)
T cd01337          68 -GADVVVIPAGVPRK-P----GMTRD---DLFNINAGI----VRDLATAVAKACPKALILIISN  118 (310)
T ss_pred             -CCCEEEEeCCCCCC-C----CCCHH---HHHHHHHHH----HHHHHHHHHHhCCCeEEEEccC
Confidence             58899999997532 2    22444   366667544    44444444443 3566776653

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.08  E-value=0.036  Score=43.07  Aligned_cols=39  Identities=18%  Similarity=0.246  Sum_probs=33.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~   98 (210)
                      +++.||.++|.|| |.+|..-++.|++.|++|++++.+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            4567999999987 67899999999999999999987653

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=96.08  E-value=0.056  Score=45.52  Aligned_cols=41  Identities=32%  Similarity=0.340  Sum_probs=34.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~  103 (210)
                      .|.+++|.|+ +++|...++.....|+ +|+.+++++++.+.+
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~  228 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA  228 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4889999985 8999998888888898 799999998776543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=96.07  E-value=0.078  Score=43.46  Aligned_cols=58  Identities=19%  Similarity=0.322  Sum_probs=43.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEEEEecc
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIVEYDFS  124 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~~~D~~  124 (210)
                      |+|.| .||+|-++++.|+..|. ++.++|.+                   +.+.+.+++.+++..|+.++.....+++
T Consensus         2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~   79 (291)
T cd01488           2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQ   79 (291)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccC
Confidence            56776 58999999999999997 47777754                   3455666677777777777777665554

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PLN02928 oxidoreductase family protein

Probab=96.07  E-value=0.057  Score=45.44  Aligned_cols=37  Identities=27%  Similarity=0.484  Sum_probs=33.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .+.||++.|.|. |.||+++|+.+...|++|+..+|+.
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            577999999987 8999999999999999999999873

>PRK14851 hypothetical protein; Provisional

Probab=96.05  E-value=0.054  Score=49.53  Aligned_cols=65  Identities=15%  Similarity=0.236  Sum_probs=48.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEE
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINI  118 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~  118 (210)
                      .++++++|+|.|+ ||+|-.+++.|++.|. +++++|.+                   ..|.+.+++.+.+.+|..++..
T Consensus        39 ~kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~  117 (679)
T PRK14851         39 ERLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITP  117 (679)
T ss_pred             HHHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEE
Confidence            3466889999985 7999999999999996 57777754                   2455556677777777777777


Q ss_pred             EEEecc
Q 045749          119 VEYDFS  124 (210)
Q Consensus       119 ~~~D~~  124 (210)
                      +...++
T Consensus       118 ~~~~i~  123 (679)
T PRK14851        118 FPAGIN  123 (679)
T ss_pred             EecCCC
Confidence            765543

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=96.04  E-value=0.066  Score=42.58  Aligned_cols=42  Identities=24%  Similarity=0.316  Sum_probs=35.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|.+++|.|+++++|..+++.....|++|+.++++.++.+.+
T Consensus       108 ~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  149 (293)
T cd05195         108 KGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFL  149 (293)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            378999999999999999888888999999999887665543

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.03  E-value=0.017  Score=47.47  Aligned_cols=45  Identities=20%  Similarity=0.241  Sum_probs=38.8

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      ..++.||.+.|.|.++-+|+.+|..|.++|++|+++.++...+++
T Consensus       154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e  198 (301)
T PRK14194        154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKA  198 (301)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence            346779999999999999999999999999999999877654443

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.00  E-value=0.028  Score=45.82  Aligned_cols=43  Identities=21%  Similarity=0.304  Sum_probs=36.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE  101 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~  101 (210)
                      .++.||.++|.|.|.-.|+.+|..|.++|++|+++......+.
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~  195 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLS  195 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHH
Confidence            4567999999999999999999999999999998866554443

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.00  E-value=0.026  Score=42.01  Aligned_cols=45  Identities=20%  Similarity=0.282  Sum_probs=33.5

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      .+..+.||.++|.|- +.+|+.+|+.|...|++|++++.++-++-+
T Consensus        17 t~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alq   61 (162)
T PF00670_consen   17 TNLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQ   61 (162)
T ss_dssp             H-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHH
T ss_pred             CceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHH
Confidence            356678999999976 799999999999999999999999866543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=95.97  E-value=0.042  Score=47.46  Aligned_cols=35  Identities=26%  Similarity=0.474  Sum_probs=29.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNH   97 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~   97 (210)
                      .+..+|+.|| ||||-++.+.|+..|.. |.++|-+.
T Consensus        11 ~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDT   46 (603)
T KOG2013|consen   11 KSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDT   46 (603)
T ss_pred             ccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccc
Confidence            4667888877 79999999999999985 88888764

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.95  E-value=0.41  Score=39.68  Aligned_cols=115  Identities=17%  Similarity=0.267  Sum_probs=71.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ..+.|+|+ |.+|..+|..++.+|.  .++++|++++.++....++....+-.....+.  .+.+      .+    .+.
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~--~~~d------y~----~~~   70 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIE--ADKD------YS----VTA   70 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEE--ECCC------HH----HhC
Confidence            35788896 9999999999998874  59999999988887777776643211100111  1111      12    233


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGS  205 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS  205 (210)
                        +-|++|.+||.... +    ..+..+   .++.|.    .+.+.+.+.+.+.. ++.++++|-
T Consensus        71 --~adivvitaG~~~k-~----g~~R~d---ll~~N~----~i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          71 --NSKVVIVTAGARQN-E----GESRLD---LVQRNV----DIFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             --CCCEEEECCCCCCC-C----CCCHHH---HHHHHH----HHHHHHHHHHHHhCCCcEEEEccC
Confidence              57899999997532 2    234443   455554    34555555555543 567777664

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=95.95  E-value=0.077  Score=43.15  Aligned_cols=78  Identities=23%  Similarity=0.370  Sum_probs=49.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|..++|+| ++++|.++++.....|++ |+++++++++.+ ..+++     +.. .++  + .   ...+..+.+.+..
T Consensus       129 ~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~-~~~~~-----g~~-~~~--~-~---~~~~~~~~l~~~~  194 (312)
T cd08269         129 AGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLA-LAREL-----GAT-EVV--T-D---DSEAIVERVRELT  194 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHh-----CCc-eEe--c-C---CCcCHHHHHHHHc
Confidence            378899996 689999999888899999 999988876654 22222     111 111  1 1   1122334444444


Q ss_pred             cCCCccEEEEcCC
Q 045749          141 DGLEVGVLINNVG  153 (210)
Q Consensus       141 ~~~~id~lvnnAg  153 (210)
                      .+..+|+++++.|
T Consensus       195 ~~~~vd~vld~~g  207 (312)
T cd08269         195 GGAGADVVIEAVG  207 (312)
T ss_pred             CCCCCCEEEECCC
Confidence            3336888888875

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>PRK14967 putative methyltransferase; Provisional

Probab=95.95  E-value=0.52  Score=36.87  Aligned_cols=75  Identities=13%  Similarity=0.148  Sum_probs=47.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +..++-.|+++|.   ++..+++.|+ +|+.++.++..++...+.+...  +.++.++..|+.+.             ..
T Consensus        37 ~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~--~~~~~~~~~d~~~~-------------~~   98 (223)
T PRK14967         37 GRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLA--GVDVDVRRGDWARA-------------VE   98 (223)
T ss_pred             CCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHh--CCeeEEEECchhhh-------------cc
Confidence            5678888887655   3444555676 8999999998877666555443  23444444443211             11


Q ss_pred             CCCccEEEEcCCCC
Q 045749          142 GLEVGVLINNVGIT  155 (210)
Q Consensus       142 ~~~id~lvnnAg~~  155 (210)
                      ....|.++.|....
T Consensus        99 ~~~fD~Vi~npPy~  112 (223)
T PRK14967         99 FRPFDVVVSNPPYV  112 (223)
T ss_pred             CCCeeEEEECCCCC
Confidence            22689999997643

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.94  E-value=0.07  Score=37.01  Aligned_cols=52  Identities=23%  Similarity=0.523  Sum_probs=37.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..++..+    .  +  +.++..|.+++
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~----~--~--~~~i~gd~~~~   52 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE----E--G--VEVIYGDATDP   52 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH----T--T--SEEEES-TTSH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh----c--c--cccccccchhh
Confidence            466776 579999999999977799999999887655432    2  2  55666776665

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.92  E-value=0.33  Score=39.95  Aligned_cols=44  Identities=25%  Similarity=0.311  Sum_probs=34.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQ  108 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~  108 (210)
                      +.+.|.|| |-+|..+|..++..|. +|++.|++++.++....++.
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~   47 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIA   47 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHH
Confidence            35788898 8889999999999875 89999999887655444443

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.91  E-value=0.073  Score=46.15  Aligned_cols=39  Identities=18%  Similarity=0.438  Sum_probs=34.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      .++|.|+ +.+|+++++.|.++|..|++++++++..++..
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~   40 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQ   40 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence            5788887 99999999999999999999999988776554

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=95.88  E-value=0.067  Score=44.31  Aligned_cols=79  Identities=22%  Similarity=0.254  Sum_probs=50.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+| ++++|.++++.....|++ |+++++++++.+.+. ++     +.. .+  .|..+    ....+.+.+..
T Consensus       165 ~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~-----g~~-~~--~~~~~----~~~~~~i~~~~  230 (343)
T cd08235         165 PGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KL-----GAD-YT--IDAAE----EDLVEKVRELT  230 (343)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-Hh-----CCc-EE--ecCCc----cCHHHHHHHHh
Confidence            378999996 689999998888888999 888888877765442 22     111 11  11111    22334454444


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++..+|++++++|.
T Consensus       231 ~~~~vd~vld~~~~  244 (343)
T cd08235         231 DGRGADVVIVATGS  244 (343)
T ss_pred             CCcCCCEEEECCCC
Confidence            44358999998773

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.88  E-value=0.024  Score=43.90  Aligned_cols=38  Identities=16%  Similarity=0.255  Sum_probs=34.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      +++.||.++|.|| |.+|...++.|.+.|++|++++++.
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            4677999999998 8999999999999999999998764

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.86  E-value=0.017  Score=42.50  Aligned_cols=42  Identities=21%  Similarity=0.525  Sum_probs=34.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHh
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQA  109 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~  109 (210)
                      |+.+|+.|-+|+++|..|.++|.+|+..  ++++-+.+..++..
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~   42 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPE   42 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCH
Confidence            5789999999999999999999999998  55666666666543

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.86  E-value=0.038  Score=37.06  Aligned_cols=37  Identities=30%  Similarity=0.502  Sum_probs=31.9

Q ss_pred             CCChHHHHHHHHHHHcC---CeEEEE-ecChhHHHHHHHHH
Q 045749           71 ATDGIGKAFAHQLAQHG---LNLILV-SRNHNKLEKISNEI  107 (210)
Q Consensus        71 assGiG~~~a~~l~~~G---~~Vi~~-~r~~~~l~~~~~~l  107 (210)
                      |+|.+|.++++.|.+.|   .+|.+. +|++++.++..++.
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            77999999999999999   899855 99999888776554

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.85  E-value=0.064  Score=44.71  Aligned_cols=41  Identities=22%  Similarity=0.237  Sum_probs=33.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~~  103 (210)
                      .|++++|+| ++++|...++.....|++ |+.+++++++.+.+
T Consensus       160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~  201 (347)
T PRK10309        160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALA  201 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            378999997 599999999888889997 67888888776543

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.85  E-value=0.01  Score=40.82  Aligned_cols=38  Identities=21%  Similarity=0.308  Sum_probs=32.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      ++++||.++|.|| |..|..-++.|.+.|++|++++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            3567999999998 8999999999999999999999985

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.85  E-value=0.033  Score=45.83  Aligned_cols=41  Identities=27%  Similarity=0.342  Sum_probs=35.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE  101 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~  101 (210)
                      .+.|++++|.|. |++|+.+++.+.+.|++|++++|+.++.+
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            456899999997 67999999999999999999999976543

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.82  E-value=0.23  Score=42.40  Aligned_cols=114  Identities=13%  Similarity=0.174  Sum_probs=71.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-e----EEE----EecChhHHHHHHHHHHhhC-CCceeEEEEEecccCccchhhH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL-N----LIL----VSRNHNKLEKISNEIQAEN-PNTQINIVEYDFSCDVVSAGNI  133 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~-~----Vi~----~~r~~~~l~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~  133 (210)
                      -.+.|+||++.+|.++|..++.+|. .    +.+    +++++++++..+-++.+.. +... .   ..++..       
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~-~---v~i~~~-------  113 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLR-E---VSIGID-------  113 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcC-c---eEEecC-------
Confidence            4689999999999999999998874 2    444    4889999888888876642 1110 0   011111       


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh-C-CCCEEEEec
Q 045749          134 KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR-R-KKGAIVNIG  204 (210)
Q Consensus       134 ~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~-~-~~g~iv~is  204 (210)
                        -.+.+.  +-|++|..||.... +    ..+..+   .++.|.    .+.+...+.+.+ . ..+.|+++|
T Consensus       114 --~y~~~k--daDIVVitAG~prk-p----g~tR~d---ll~~N~----~I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       114 --PYEVFE--DADWALLIGAKPRG-P----GMERAD---LLDING----QIFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             --CHHHhC--CCCEEEECCCCCCC-C----CCCHHH---HHHHHH----HHHHHHHHHHHHhCCCCeEEEEcC
Confidence              122333  58899999997532 2    224433   566664    456666666665 3 456677665

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.82  E-value=0.14  Score=42.35  Aligned_cols=114  Identities=15%  Similarity=0.293  Sum_probs=68.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .|.|+|+ +++|.++|..|+.++.  .+++.|++++..+....++.+..+....   ...+..+    .   . .+.+. 
T Consensus         2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~---~~~i~~~----~---~-y~~~~-   68 (313)
T COG0039           2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGS---DVKITGD----G---D-YEDLK-   68 (313)
T ss_pred             eEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccC---ceEEecC----C---C-hhhhc-
Confidence            5789999 9999999999988764  6999999987777777676553211100   0111111    0   0 12233 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                       +-|++|-.||.... |    -++.+|   .++.|..=    .+...+.+.+.. .+.++.++
T Consensus        69 -~aDiVvitAG~prK-p----GmtR~D---Ll~~Na~I----~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          69 -GADIVVITAGVPRK-P----GMTRLD---LLEKNAKI----VKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             -CCCEEEEeCCCCCC-C----CCCHHH---HHHhhHHH----HHHHHHHHHhhCCCeEEEEec
Confidence             57899999997643 3    235554   56777543    444444444444 35555544

>PLN02827 Alcohol dehydrogenase-like

Probab=95.82  E-value=0.085  Score=44.76  Aligned_cols=40  Identities=33%  Similarity=0.359  Sum_probs=32.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEK  102 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~  102 (210)
                      .|++++|.|+ +++|...++.....|++ |+++++++++.+.
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~  233 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEK  233 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            4889999985 89999998888888985 7778888776543

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.82  E-value=0.53  Score=42.23  Aligned_cols=39  Identities=18%  Similarity=0.515  Sum_probs=32.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      .++|.|+ +.+|++++++|.++|.+++++|.|+++.++..
T Consensus       419 hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~  457 (558)
T PRK10669        419 HALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELR  457 (558)
T ss_pred             CEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence            4556554 78999999999999999999999998776654

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.80  E-value=0.092  Score=45.51  Aligned_cols=43  Identities=23%  Similarity=0.424  Sum_probs=37.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISN  105 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~  105 (210)
                      ..+.++|.|+ +.+|+.+++.|.++|.+|++++++++..++..+
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~  272 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAE  272 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            4678999988 999999999999999999999999887766544

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.79  E-value=0.027  Score=48.57  Aligned_cols=42  Identities=19%  Similarity=0.249  Sum_probs=36.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE  101 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~  101 (210)
                      ..+.||+++|.|. |.||+.+|+.+...|++|+++++++.+..
T Consensus       208 ~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        208 VLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            3467999999997 68999999999999999999999876643

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.77  E-value=0.1  Score=43.26  Aligned_cols=66  Identities=15%  Similarity=0.116  Sum_probs=44.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH--HHHHHhhCCCceeEEEEEecccC
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI--SNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~--~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      .+.||++.|.|- |.||+++|+.+..-|++|+..+|.....+..  ...+.+..+...+..+.+-++.+
T Consensus       142 ~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~  209 (311)
T PRK08410        142 EIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEK  209 (311)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCch
Confidence            578999999987 8999999999999999999999853211100  11222222245566666555544

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=95.74  E-value=0.021  Score=45.38  Aligned_cols=115  Identities=17%  Similarity=0.139  Sum_probs=74.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH-HHHHh---hCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS-NEIQA---ENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~-~~l~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .|+++|||=++-=|.-+|+.|..+|+.|.-+-|......... +.+-.   ...+..+...-.|++|..+    ..++..
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~----L~k~I~  103 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSC----LIKLIS  103 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHH----HHHHHh
Confidence            479999999999999999999999999988777554432221 22211   1224667777788887733    233443


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHH
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLT  190 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~  190 (210)
                      .+   +++-+.|-|..++.+-      +.|--+.+-++...|+..+..+...
T Consensus       104 ~i---kPtEiYnLaAQSHVkv------SFdlpeYTAeVdavGtLRlLdAi~~  146 (376)
T KOG1372|consen  104 TI---KPTEVYNLAAQSHVKV------SFDLPEYTAEVDAVGTLRLLDAIRA  146 (376)
T ss_pred             cc---CchhhhhhhhhcceEE------EeecccceeeccchhhhhHHHHHHh
Confidence            33   3556778787665432      2222234566778888888877544

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.71  E-value=0.084  Score=43.77  Aligned_cols=38  Identities=26%  Similarity=0.223  Sum_probs=33.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~   98 (210)
                      .+.||++.|.|- |.||+++|+.+...|++|...+|..+
T Consensus       133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~  170 (312)
T PRK15469        133 HREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRK  170 (312)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            467999999865 78999999999999999999998654

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.71  E-value=0.084  Score=43.98  Aligned_cols=90  Identities=17%  Similarity=0.210  Sum_probs=54.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHH---H--HHHHHhhCCCceeEEEEEecccCccchhhH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEK---I--SNEIQAENPNTQINIVEYDFSCDVVSAGNI  133 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~---~--~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~  133 (210)
                      .+.||++-|.|. |.||+++|+.+..-|++|+..|+ .....+.   .  .+.+.+......+..+.+-++.+...--..
T Consensus       139 el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~i~~  217 (324)
T COG0111         139 ELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGLINA  217 (324)
T ss_pred             cccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhcccCH
Confidence            567999999976 78999999999999999999999 3322111   0  112222222456666666666653222222


Q ss_pred             HHHHHHhcCCCccEEEEcCC
Q 045749          134 KAIEMAIDGLEVGVLINNVG  153 (210)
Q Consensus       134 ~~~~~~~~~~~id~lvnnAg  153 (210)
                      +.+.. .+.  =.++||+|-
T Consensus       218 ~~~a~-MK~--gailIN~aR  234 (324)
T COG0111         218 EELAK-MKP--GAILINAAR  234 (324)
T ss_pred             HHHhh-CCC--CeEEEECCC
Confidence            33333 222  227777773

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=95.70  E-value=0.093  Score=43.42  Aligned_cols=40  Identities=25%  Similarity=0.386  Sum_probs=33.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKI  103 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~  103 (210)
                      |++++|.|+ +++|.++++.....| .+|+.+++++++.+.+
T Consensus       168 ~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~  208 (340)
T cd05284         168 GSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLA  208 (340)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH
Confidence            789999995 569999988888888 8999999887765543

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=95.67  E-value=0.23  Score=41.79  Aligned_cols=78  Identities=22%  Similarity=0.242  Sum_probs=49.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +.+|+|+|+ +-||...+.-....|+. |+++++++++++.+++..     +..       .......+.....+.+...
T Consensus       169 ~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~-----g~~-------~~~~~~~~~~~~~~~~~t~  235 (350)
T COG1063         169 GGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAG-----GAD-------VVVNPSEDDAGAEILELTG  235 (350)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhC-----CCe-------EeecCccccHHHHHHHHhC
Confidence            348888876 78999887777778865 777899999887655432     111       1111111122344444444


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      +...|++|-++|
T Consensus       236 g~g~D~vie~~G  247 (350)
T COG1063         236 GRGADVVIEAVG  247 (350)
T ss_pred             CCCCCEEEECCC
Confidence            336999999998

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.65  E-value=0.082  Score=43.03  Aligned_cols=40  Identities=20%  Similarity=0.297  Sum_probs=34.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      .|++++|.|+++++|.++++.....|++|+.+.++ ++.+.
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~  183 (326)
T cd08272         144 AGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAF  183 (326)
T ss_pred             CCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHH
Confidence            37899999999999999999999999999998877 55443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=95.64  E-value=0.12  Score=43.63  Aligned_cols=40  Identities=28%  Similarity=0.375  Sum_probs=34.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKI  103 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~  103 (210)
                      |++++|.| ++++|.+++......|+ +|+.++++.++++.+
T Consensus       191 g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a  231 (373)
T cd08299         191 GSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA  231 (373)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            78899996 58999999999989999 799999988776654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.64  E-value=0.13  Score=42.78  Aligned_cols=36  Identities=31%  Similarity=0.482  Sum_probs=32.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .|++++|.|+++++|.+++......|++|+.++++.
T Consensus       177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~  212 (350)
T cd08274         177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA  212 (350)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch
Confidence            378999999999999999998889999998887654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.61  E-value=0.062  Score=46.62  Aligned_cols=37  Identities=22%  Similarity=0.275  Sum_probs=31.3

Q ss_pred             CCcEEE----EEcCCChHHHHHHHHHHHcCCeEEEEecChh
Q 045749           62 YGSWAL----ITGATDGIGKAFAHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        62 ~gk~vl----ITGassGiG~~~a~~l~~~G~~Vi~~~r~~~   98 (210)
                      .|..++    |+||++|+|.++++.+...|+.|+.+.+.+.
T Consensus        33 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~   73 (450)
T PRK08261         33 PGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGL   73 (450)
T ss_pred             CCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccc
Confidence            355666    8899999999999999999999998876554

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=95.61  E-value=0.088  Score=43.75  Aligned_cols=82  Identities=18%  Similarity=0.263  Sum_probs=49.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+| ++++|.++++.....|++ |+++++++++.+.+ +++     +.. .+  .|..+. ...+..+++.+..
T Consensus       162 ~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~-~~~-----g~~-~v--i~~~~~-~~~~~~~~~~~~~  230 (343)
T cd05285         162 PGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFA-KEL-----GAT-HT--VNVRTE-DTPESAEKIAELL  230 (343)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHc-----CCc-EE--eccccc-cchhHHHHHHHHh
Confidence            378999986 579999998888889998 88888887665433 222     111 11  111111 1111234454444


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++.++|+++++.|.
T Consensus       231 ~~~~~d~vld~~g~  244 (343)
T cd05285         231 GGKGPDVVIECTGA  244 (343)
T ss_pred             CCCCCCEEEECCCC
Confidence            44468999988774

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08251 polyketide_synthase polyketide synthase

Probab=95.60  E-value=0.087  Score=42.38  Aligned_cols=41  Identities=27%  Similarity=0.364  Sum_probs=35.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      |.+++|.|+++++|.++++.....|++|+.+++++++.+.+
T Consensus       121 g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  161 (303)
T cd08251         121 GEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYL  161 (303)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            78999999999999999998888999999998887665544

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.59  E-value=0.1  Score=43.94  Aligned_cols=41  Identities=27%  Similarity=0.280  Sum_probs=33.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|.|+ +++|...++.....|+ +|+.+++++++.+.+
T Consensus       184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~  225 (365)
T cd08277         184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA  225 (365)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            3789999974 8999999888888899 699999988776544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.59  E-value=0.037  Score=45.09  Aligned_cols=43  Identities=23%  Similarity=0.468  Sum_probs=37.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE  101 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~  101 (210)
                      .++.||.++|.|.|.=.|+.++..|.++|++|+++.+....++
T Consensus       155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~  197 (285)
T PRK10792        155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLR  197 (285)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHH
Confidence            4567999999999999999999999999999999988765544

>PLN02602 lactate dehydrogenase

Probab=95.58  E-value=0.76  Score=38.78  Aligned_cols=114  Identities=13%  Similarity=0.195  Sum_probs=71.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +.+.|+|+ |.+|..+|..++.+|.  .++++|++++.++..+.++....+-....    .+...    ...+    .+.
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~----~i~~~----~dy~----~~~  104 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT----KILAS----TDYA----VTA  104 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC----EEEeC----CCHH----HhC
Confidence            58899996 9999999999998875  59999999988888777776542111001    11111    0011    233


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                        +-|++|..||.... +    ..+..+   .+..|.    .+.+.+.+.+.+.. ++.++++|
T Consensus       105 --daDiVVitAG~~~k-~----g~tR~d---ll~~N~----~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        105 --GSDLCIVTAGARQI-P----GESRLN---LLQRNV----ALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             --CCCEEEECCCCCCC-c----CCCHHH---HHHHHH----HHHHHHHHHHHHHCCCeEEEEec
Confidence              57899999997532 2    234433   455453    45566666665543 56677665

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.56  E-value=0.095  Score=34.59  Aligned_cols=36  Identities=31%  Similarity=0.482  Sum_probs=30.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEec
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQH-GLNLILVSR   95 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r   95 (210)
                      .++.+|+++|.|+ ++.|+.+++.+.+. +.+|.+++|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            3456899999999 99999999999998 566777776

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.52  E-value=0.049  Score=44.40  Aligned_cols=43  Identities=14%  Similarity=0.309  Sum_probs=37.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE  101 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~  101 (210)
                      .++.||.++|.|.|.=+|+.++..|.++|++|+++......++
T Consensus       154 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~  196 (284)
T PRK14190        154 IDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLA  196 (284)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHH
Confidence            4567999999999999999999999999999999876554444

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.50  E-value=0.037  Score=45.09  Aligned_cols=43  Identities=23%  Similarity=0.396  Sum_probs=36.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE  101 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~  101 (210)
                      .++.||.++|.|.|.=+|+.++..|.++|++|+++......+.
T Consensus       154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~  196 (285)
T PRK14189        154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLA  196 (285)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHH
Confidence            4667999999999999999999999999999998876554443

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.49  E-value=0.048  Score=46.89  Aligned_cols=44  Identities=20%  Similarity=0.271  Sum_probs=37.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      ..+.|++|+|.|++ .||+.+++.+...|++|+++++++.+++..
T Consensus       198 ~~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         198 VMIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            34579999999884 899999999999999999999998776554

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.49  E-value=0.043  Score=47.67  Aligned_cols=39  Identities=33%  Similarity=0.548  Sum_probs=34.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      ++.|.||.|++|.++|+.|.+.|.+|++++|+++..++.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~   40 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV   40 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence            478999999999999999999999999999997765443

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=95.48  E-value=0.49  Score=38.87  Aligned_cols=112  Identities=17%  Similarity=0.279  Sum_probs=62.1

Q ss_pred             EEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCc
Q 045749           67 LITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEV  145 (210)
Q Consensus        67 lITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~i  145 (210)
                      .|.|| +.+|..+|..++.+|. +|++.|++++.++....++.+........ .....+.+      .+    .+.  +-
T Consensus         2 ~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~-~~I~~t~d------~~----~l~--dA   67 (300)
T cd01339           2 SIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSD-TKVTGTND------YE----DIA--GS   67 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCC-eEEEEcCC------HH----HhC--CC
Confidence            57888 8899999999998875 99999999876543333333221000000 00111111      11    233  57


Q ss_pred             cEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          146 GVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       146 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                      |++|.++|.... +    +.+..+   .+.-|    +.+.+.+.+.+.+.. .+.++++|
T Consensus        68 DiVIit~g~p~~-~----~~~r~e---~~~~n----~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          68 DVVVITAGIPRK-P----GMSRDD---LLGTN----AKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             CEEEEecCCCCC-c----CCCHHH---HHHHH----HHHHHHHHHHHHHHCCCeEEEEec
Confidence            899999997532 1    223322   33333    345666666666554 34555554

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=95.43  E-value=0.051  Score=45.17  Aligned_cols=41  Identities=15%  Similarity=0.120  Sum_probs=33.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|.|+ +++|...++.....|++|+.+++++++.+.+
T Consensus       165 ~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a  205 (329)
T TIGR02822       165 PGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLA  205 (329)
T ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence            3889999997 8999887776667899999999998876543

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.43  E-value=0.041  Score=45.18  Aligned_cols=39  Identities=21%  Similarity=0.284  Sum_probs=35.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCh
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNH   97 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~-r~~   97 (210)
                      .++.||.++|.|.+.-+|+.+|..|.++|++|+++. |+.
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            356799999999999999999999999999999995 654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	210
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-16
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		2e-16
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-16
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-16
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-15
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		9e-15
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-14
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		2e-14
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		2e-14
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-14
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-14
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		2e-14
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-14
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		2e-14
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		3e-14
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		5e-14
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		2e-13
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		2e-13
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		7e-13
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		8e-13
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		2e-12
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		3e-12
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		4e-12
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		8e-12
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		1e-11
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		7e-11
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		1e-10
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		1e-10
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		2e-10
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		3e-10
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		1e-09
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		2e-09
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		2e-09
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-09
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		3e-09
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		4e-09
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		7e-09
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		8e-09
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		9e-09
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		1e-08
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		2e-08
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		2e-08
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		2e-08
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-08
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		3e-08
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		3e-08
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		3e-08
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		3e-08
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		3e-08
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		4e-08
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		6e-08
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		6e-08
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		6e-08
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		6e-08
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		7e-08
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		7e-08
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		1e-07
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		1e-07
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		1e-07
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		2e-07
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		3e-07
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		5e-07
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		6e-07
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		6e-07
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		6e-07
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		6e-07
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		7e-07
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		8e-07
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		8e-07
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		9e-07
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		9e-07
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		9e-07
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		1e-06
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		1e-06
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		1e-06
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		2e-06
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-06
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		3e-06
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		4e-06
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		4e-06
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-06
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		5e-06
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		5e-06
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		5e-06
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		6e-06
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		6e-06
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		7e-06
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		8e-06
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		9e-06
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		1e-05
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-05
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		2e-05
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		2e-05
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		2e-05
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		2e-05
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		2e-05
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		2e-05
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		3e-05
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		3e-05
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		3e-05
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		4e-05
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		4e-05
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		4e-05
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		4e-05
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		4e-05
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		4e-05
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		6e-05
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		7e-05
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		1e-04
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		1e-04
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-04
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		2e-04
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		2e-04
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		2e-04
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-04
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		2e-04
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		2e-04
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		3e-04
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		3e-04
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		3e-04
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		4e-04
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		4e-04
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		4e-04
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		4e-04
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		6e-04
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		6e-04
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		7e-04

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 9/143 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA+ GIGKA A  LA+ G  +I  + + +  + IS+ +        +N+   +
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPE 71
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            S + V    +KAI     G+++  L+NN GIT         + E+EW DI+  NL    
Sbjct: 72  -SIEAV----LKAITDEFGGVDI--LVNNAGITRDN--LLMRMKEEEWSDIMETNLTSIF 122
Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
           R++KAVL GMM++++G I+N+GS
Sbjct: 123 RLSKAVLRGMMKKRQGRIINVGS 145

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 9/143 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA+ GIGKA A  LA+ G  +I  + + +  + IS+ +        +N+   +
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPE 71
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            S + V    +KAI     G+++  L+NN GIT         + E+EW DI+  NL    
Sbjct: 72  -SIEAV----LKAITDEFGGVDI--LVNNAGITRDN--LLMRMKEEEWSDIMETNLTSIF 122
Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
           R++KAVL GMM++++G I+N+GS
Sbjct: 123 RLSKAVLRGMMKKRQGRIINVGS 145

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 9/143 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA+ GIGKA A  LA+ G  +I  + + +  + IS+ +        +N+   +
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPE 71
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            S + V    +KAI     G+++  L+NN GIT         + E+EW DI+  NL    
Sbjct: 72  -SIEAV----LKAITDEFGGVDI--LVNNAGITRDN--LLMRMKEEEWSDIMETNLTSIF 122
Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
           R++KAVL GMM++++G I+N+GS
Sbjct: 123 RLSKAVLRGMMKKRQGRIINVGS 145

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 80.1 bits (196), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 9/143 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA+ GIGKA A  LA+ G  +I  + + +  + IS+ +        +N+   +
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPE 71
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            S + V    +KAI     G+++  L+NN  IT         + E+EW DI+  NL    
Sbjct: 72  -SIEAV----LKAITDEFGGVDI--LVNNAAITRDN--LLMRMKEEEWSDIMETNLTSIF 122
Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
           R++KAVL GMM++++G I+N+GS
Sbjct: 123 RLSKAVLRGMMKKRQGRIINVGS 145

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 9/143 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA+ GIGKA A  LA+ G  +I  + + +  + IS+ +        +N+   +
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPE 71
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            S + V    +KAI     G+++  L+NN  IT         + E+EW DI+  NL    
Sbjct: 72  -SIEAV----LKAITDEFGGVDI--LVNNADITRDN--LLMRMKEEEWSDIMETNLTSIF 122
Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
           R++KAVL GMM++++G I+N+GS
Sbjct: 123 RLSKAVLRGMMKKRQGRIINVGS 145

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 76.6 bits (187), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 9/143 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA+ GIGKA A  LA+ G  +I  + + +  + IS+ +        +N+   +
Sbjct: 9   GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXALNVTNPE 68
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            S + V    +KAI     G+++  L+NN GIT  +        E+EW DI   NL    
Sbjct: 69  -SIEAV----LKAITDEFGGVDI--LVNNAGIT--RDNLLXRXKEEEWSDIXETNLTSIF 119
Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
           R++KAVL G  ++++G I+N+GS
Sbjct: 120 RLSKAVLRGXXKKRQGRIINVGS 142

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA+ GIG+A A  LA  G  +I  + + N  + IS+ + A      +N+ +  
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPA 64
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
               V+    I+A E      EV +L+NN GIT         + ++EW DI+  NL    
Sbjct: 65  SIESVLE--KIRA-EFG----EVDILVNNAGITRDN--LLMRMKDEEWNDIIETNLSSVF 115
Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
           R++KAV+  MM+++ G I+ IGS
Sbjct: 116 RLSKAVMRAMMKKRHGRIITIGS 138

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA+ GIG+A A  LA  G  +I  + + N  + IS+ + A      +N+ +  
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPA 64
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
               V+    I+A E      EV +L+NN GIT         + ++EW DI+  NL    
Sbjct: 65  SIESVLE--KIRA-EFG----EVDILVNNAGITRDN--LLMRMKDEEWNDIIETNLSSVF 115
Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
           R++KAV+  MM+++ G I+ IGS
Sbjct: 116 RLSKAVMRAMMKKRHGRIITIGS 138

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 76/147 (51%), Gaps = 18/147 (12%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD-FS 124
           AL+TGAT GIG   A +L + GL + + +R    L     E++          VE D  +
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------VEADGRT 81
Query: 125 CDVVSAGNIKAIEMAIDGLE----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           CDV S   I+A+  A+  +E    V VL+NN G   P      E+ ++ W+D+V  NL G
Sbjct: 82  CDVRSVPEIEALVAAV--VERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTG 137
Query: 181 TTRVTKAVLT--GMMRRKKGAIVNIGS 205
             RVTK VL   GM+ R  G IVNI S
Sbjct: 138 VFRVTKQVLKAGGMLERGTGRIVNIAS 164

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 76/147 (51%), Gaps = 18/147 (12%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD-FS 124
           AL+TGAT GIG   A +L + GL + + +R    L     E++          VE D  +
Sbjct: 9   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------VEADGRT 61
Query: 125 CDVVSAGNIKAIEMAIDGLE----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           CDV S   I+A+  A+  +E    V VL+NN G   P      E+ ++ W+D+V  NL G
Sbjct: 62  CDVRSVPEIEALVAAV--VERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTG 117
Query: 181 TTRVTKAVLT--GMMRRKKGAIVNIGS 205
             RVTK VL   GM+ R  G IVNI S
Sbjct: 118 VFRVTKQVLKAGGMLERGTGRIVNIAS 144

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 76/147 (51%), Gaps = 18/147 (12%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD-FS 124
           AL+TGAT GIG   A +L + GL + + +R    L     E++          VE D  +
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------VEADGRT 77
Query: 125 CDVVSAGNIKAIEMAIDGLE----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           CDV S   I+A+  A+  +E    V VL+NN G   P      E+ ++ W+D+V  NL G
Sbjct: 78  CDVRSVPEIEALVAAV--VERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTG 133
Query: 181 TTRVTKAVLT--GMMRRKKGAIVNIGS 205
             RVTK VL   GM+ R  G IVNI S
Sbjct: 134 VFRVTKQVLKAGGMLERGTGRIVNIAS 160

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 76/147 (51%), Gaps = 18/147 (12%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD-FS 124
           AL+TGAT GIG   A +L + GL + + +R    L     E++          VE D  +
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------VEADGRT 81
Query: 125 CDVVSAGNIKAIEMAIDGLE----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           CDV S   I+A+  A+  +E    V VL+NN G   P      E+ ++ W+D+V  NL G
Sbjct: 82  CDVRSVPEIEALVAAV--VERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTG 137
Query: 181 TTRVTKAVLT--GMMRRKKGAIVNIGS 205
             RVTK VL   GM+ R  G IVNI S
Sbjct: 138 VFRVTKQVLKAGGMLERGTGRIVNIAS 164

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 76/147 (51%), Gaps = 18/147 (12%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD-FS 124
           AL+TGAT GIG   A +L + GL + + +R    L     E++          VE D  +
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------VEADGRT 81
Query: 125 CDVVSAGNIKAIEMAIDGLE----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           CDV S   I+A+  A+  +E    V VL+NN G   P      E+ ++ W+D+V  NL G
Sbjct: 82  CDVRSVPEIEALVAAV--VERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTG 137
Query: 181 TTRVTKAVLT--GMMRRKKGAIVNIGS 205
             RVTK VL   GM+ R  G IVNI S
Sbjct: 138 VFRVTKQVLKAGGMLERGTGRIVNIAS 164

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 76/147 (51%), Gaps = 18/147 (12%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD-FS 124
           AL+TGAT GIG   A +L + GL + + +R    L     E++          VE D  +
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------VEADGRT 81
Query: 125 CDVVSAGNIKAIEMAIDGLE----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           CDV S   I+A+  A+  +E    V VL+NN G   P      E+ ++ W+D+V  NL G
Sbjct: 82  CDVRSVPEIEALVAAV--VERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTG 137
Query: 181 TTRVTKAVLT--GMMRRKKGAIVNIGS 205
             RVTK VL   GM+ R  G IVNI S
Sbjct: 138 VFRVTKQVLKAGGMLERGTGRIVNIAS 164

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TG+T GIGKA A  L   G N+++  R    + +   EI+A+ P+  +  V  D
Sbjct: 10  GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVAD 69
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
              +    G    IE      +V +LINN+GI  P   F  ++ +++W  +  VN+    
Sbjct: 70  LGTE---QGCQDVIEKY---PKVDILINNLGIFEPVEYF--DIPDEDWFKLFEVNIXSGV 121
Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAI 209
           R+T++ L   + RK+G ++ I S AAI
Sbjct: 122 RLTRSYLKKXIERKEGRVIFIASEAAI 148

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA+ GIG+A A  LA  G  +I  + + N  + IS+ + A      +N+ +  
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPA 64
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
               V+    I+A E      EV +L+NN GIT         + ++EW DI+  NL    
Sbjct: 65  SIESVLE--KIRA-EFG----EVDILVNNAGITRDN--LLMRMKDEEWNDIIETNLSSVF 115
Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGA 207
           R++KAV+  MM+++ G I+ IG  A
Sbjct: 116 RLSKAVMRAMMKKRHGRIITIGGQA 140

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 76/147 (51%), Gaps = 18/147 (12%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD-FS 124
           AL+TGAT GIG   A +L + GL + + +R    L     E++          VE D  +
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------VEADGRT 77
Query: 125 CDVVSAGNIKAIEMAIDGLE----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           CDV S   I+A+  A+  +E    V VL+NN G     A    E+ ++ W+D+V  NL G
Sbjct: 78  CDVRSVPEIEALVAAV--VERYGPVDVLVNNAGRLGGGAT--AELADELWLDVVETNLTG 133
Query: 181 TTRVTKAVLT--GMMRRKKGAIVNIGS 205
             RVTK VL   GM+ R  G IVNI S
Sbjct: 134 VFRVTKQVLKAGGMLERGTGRIVNIAS 160

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 76/147 (51%), Gaps = 18/147 (12%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD-FS 124
           AL+TGAT GIG   A +L + GL + + +R    L     E++          VE D  +
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------VEADGRT 81
Query: 125 CDVVSAGNIKAIEMAIDGLE----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           CDV S   I+A+  A+  +E    V VL+NN G     A    E+ ++ W+D+V  NL G
Sbjct: 82  CDVRSVPEIEALVAAV--VERYGPVDVLVNNAGRLGGGAT--AELADELWLDVVETNLTG 137
Query: 181 TTRVTKAVLT--GMMRRKKGAIVNIGS 205
             RVTK VL   GM+ R  G IVNI S
Sbjct: 138 VFRVTKQVLKAGGMLERGTGRIVNIAS 164

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 70.1 bits (170), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEY 121
           G  AL+TGA+ GIG+A A  LA+ G N+++  + N  K  ++ +EI+    +        
Sbjct: 4   GKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDA------I 57
Query: 122 DFSCDVVSAGNI-KAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
               DV +A ++   ++  +D   +V +L+NN G+T  K      + E+EW  ++  NL+
Sbjct: 58  AVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVT--KDNLLMRMKEEEWDTVINTNLK 115
Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGS 205
           G    TKAV   MMR++ G IVNI S
Sbjct: 116 GVFLCTKAVSRFMMRQRHGRIVNIAS 141

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 70.1 bits (170), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 11/143 (7%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TGA+ GIG++ A QLA+ G N+ +  + +  K E +  EI+A+  ++      +   
Sbjct: 13  ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDS------FAIQ 66
Query: 125 CDVVSAGNIKAI--EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            +V  A  +KA+  E+      + VL+NN GIT         + E+EW D++  NL+G  
Sbjct: 67  ANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDN--LLMRMKEQEWDDVIDTNLKGVF 124
Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
              +     M+R++ GAI+N+ S
Sbjct: 125 NCIQKATPQMLRQRSGAIINLSS 147

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Query: 59  LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINI 118
           +K  G  +L+TG+T GIG+A A +LA  G  +I+   +  + + ++ EI A     + + 
Sbjct: 3   IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEI-ANKYGVKAHG 61
Query: 119 VEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
           VE +   +       + I   +DG++  +L+NN GIT  K   F  +   +W ++++VNL
Sbjct: 62  VEMNLLSEESINKAFEEIYNLVDGID--ILVNNAGITRDK--LFLRMSLLDWEEVLKVNL 117
Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGS 205
            GT  VT+  L  M++++ G IVNI S
Sbjct: 118 TGTFLVTQNSLRKMIKQRWGRIVNISS 144

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 57  KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQI 116
           +++   G  AL+TGA+ GIG+A A +L + G  +I  + + +  EKI+  ++A N     
Sbjct: 21  QSMSLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKA-NGVEGA 79
Query: 117 NIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRV 176
            +V  D S D   A  ++ I+  +   +  +++NN GIT         + + EW D+V  
Sbjct: 80  GLV-LDVSSDESVAATLEHIQQHLG--QPLIVVNNAGITRDN--LLVRMKDDEWFDVVNT 134
Query: 177 NLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
           NL    R++KAVL GM + + G I+NIGS
Sbjct: 135 NLNSLYRLSKAVLRGMTKARWGRIINIGS 163

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 23/157 (14%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEY 121
           G  A++TG++ G+GKA A +L   G N++L  S     L+  + E +A   N        
Sbjct: 5   GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINV------- 57
Query: 122 DFSCDVVSAGNIK-------AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDI 173
                VV+ G++K        ++ A+D    + +L+NN GIT    M   ++ EK+W D+
Sbjct: 58  -----VVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLML--KMSEKDWDDV 110
Query: 174 VRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +  NL+     TKAV   M+++K G I+NI S A I+
Sbjct: 111 LNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGII 147

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 17/151 (11%)
Query: 59  LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINI 118
            K  G  AL+TGAT GIG+A A      G  + L     +KL++I+ ++  +        
Sbjct: 23  FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKD-------- 74
Query: 119 VEYDFSCDVVSAGNIKAI----EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIV 174
             + FS ++    +IK +    E  ++G+++  L+NN GIT  +   F  + +++W D++
Sbjct: 75  -VFVFSANLSDRKSIKQLAEVAEREMEGIDI--LVNNAGIT--RDGLFVRMQDQDWDDVL 129
Query: 175 RVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
            VNL   + +T+ ++  MMRR+ G I+NI S
Sbjct: 130 AVNLTAASTLTRELIHSMMRRRYGRIINITS 160

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 11/143 (7%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TGA+ GIG++ A QLA+ G N+ +  + +  K E +  EI+A+  ++      +   
Sbjct: 7   ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDS------FAIQ 60
Query: 125 CDVVSAGNIKAI--EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            +V  A  +KA   E+      + VL+NN GIT  +        E+EW D++  NL+G  
Sbjct: 61  ANVADADEVKAXIKEVVSQFGSLDVLVNNAGIT--RDNLLXRXKEQEWDDVIDTNLKGVF 118
Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
              +      +R++ GAI+N+ S
Sbjct: 119 NCIQKATPQXLRQRSGAIINLSS 141

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           ++TGA+ GIGKA A  L + G  +++  +R+    E++S +I+A             F  
Sbjct: 5   VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQA------ITFGG 58
Query: 126 DVVSAGNIKAI-EMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV    +++A+ + AID    + V++NN GIT  +      + + +W +++ +NL G   
Sbjct: 59  DVSKEADVEAMMKTAIDAWGTIDVVVNNAGIT--RDTLLIRMKKSQWDEVIDLNLTGVFL 116
Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
            T+A    MM+++KG I+NI S
Sbjct: 117 CTQAATKIMMKKRKGRIINIAS 138

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 10/139 (7%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           LITGA+ GIG+A A  L   G  + L++R+  +L+ ++ E++   P       E D++  
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARA 68
Query: 127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTK 186
           V       A+E A    E+  L+NN G+   K +  HE+  +EW  ++  NL G     +
Sbjct: 69  VA------AMEEAFG--ELSALVNNAGVGVMKPV--HELTLEEWRLVLDTNLTGAFLGIR 118
Query: 187 AVLTGMMRRKKGAIVNIGS 205
             +  ++RR  G IVN+GS
Sbjct: 119 HAVPALLRRGGGTIVNVGS 137

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++TG   GIGKA   +L + G N+++ SR   +L+  ++E+QA  P T+   V   
Sbjct: 18  GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV-IP 76
Query: 123 FSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
             C++ +   +   ++  +D   ++  L+NN G  +        +  K W  ++  NL G
Sbjct: 77  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPA--EHISSKGWHAVLETNLTG 134
Query: 181 TTRVTKAVLTGMMRRKKGAIVNI 203
           T  + KAV +  M+   G+IVNI
Sbjct: 135 TFYMCKAVYSSWMKEHGGSIVNI 157

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 12/143 (8%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQ---INIVEYD 122
           AL+TGA+ GIG   AH LA  G  ++  + +    EK  N  + +    +   +NI    
Sbjct: 8   ALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLNI---- 63
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
              D+ S  N  A E+  + L + +L+NN GIT  +        E EW  ++  NL    
Sbjct: 64  --SDIESIQNFFA-EIKAENLAIDILVNNAGIT--RDNLXXRXSEDEWQSVINTNLSSIF 118
Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
           R +K  + G  +++ G I++IGS
Sbjct: 119 RXSKECVRGXXKKRWGRIISIGS 141

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++TGA+ GIG A A +L   G  ++L +R+  KL  +  EI A     +       
Sbjct: 29  GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAE------S 82
Query: 123 FSCDVVSAGNIKAIE---MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
            +CD+  +  I A     +A  G    VL+NN G+ +      H +   EW  ++ VNL+
Sbjct: 83  HACDLSHSDAIAAFATGVLAAHG-RCDVLVNNAGVGWFGGP-LHTMKPAEWDALIAVNLK 140
Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGS 205
               + +A    M+  K+G I+NI S
Sbjct: 141 APYLLLRAFAPAMIAAKRGHIINISS 166

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           L+TGAT G G+    +  Q G  +I   R   +L+++ +E+        + I + D    
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVR-- 56
Query: 127 VVSAGNIKAIEMAIDGL-----EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
                N  AIE  +  L      + +L+NN G+        H+   ++W  ++  N +G 
Sbjct: 57  -----NRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPA-HKASVEDWETMIDTNNKGL 110
Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAA 208
             +T+AVL GM+ R  G I+NIGS A 
Sbjct: 111 VYMTRAVLPGMVERNHGHIINIGSTAG 137

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 16/147 (10%)
Query: 67  LITGATDGIGKAFAHQL--AQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDF 123
           LITGA+ GIGKA A +   A +G + LIL +R   KLE++   I  E PN ++++ +   
Sbjct: 37  LITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQ--- 93
Query: 124 SCDVVSAGNIKAI--EMAIDGLEVGVLINNVGITYPKAMFFHEVDE---KEWMDIVRVNL 178
             D+  A  IK     +  +  ++ +L+NN G    KA+    V +   ++  D+   N+
Sbjct: 94  -LDITQAEKIKPFIENLPQEFKDIDILVNNAG----KALGSDRVGQIATEDIQDVFDTNV 148
Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGS 205
                +T+AVL     +  G IVN+GS
Sbjct: 149 TALINITQAVLPIFQAKNSGDIVNLGS 175

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 10/141 (7%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           LITGA+ GIG+  A +L   G  ++L +R   ++E I+ EI+         ++      D
Sbjct: 8   LITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVL------D 61
Query: 127 VVSAGNIKAI-EMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
           V    ++ A  + A+D    + VL+NN G+     +   +VD  EW  ++ VN++G    
Sbjct: 62  VTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVD--EWERMIDVNIKGVLWG 119
Query: 185 TKAVLTGMMRRKKGAIVNIGS 205
             AVL  M  ++ G I+NIGS
Sbjct: 120 IGAVLPIMEAQRSGQIINIGS 140

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIG+  A  LA+   ++I +SR     + + +EI++             ++ 
Sbjct: 47  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS------FGYESSGYAG 100
Query: 126 DVVSAGNIKAI--EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV     I  +  ++  +   V +L+NN GIT  +   F  +   EW D++R NL     
Sbjct: 101 DVSKKEEISEVINKILTEHKNVDILVNNAGIT--RDNLFLRMKNDEWEDVLRTNLNSLFY 158
Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
           +T+ +   M+  + G I+NI S
Sbjct: 159 ITQPISKRMINNRYGRIINISS 180

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TG++ G+G+A A  LA  G  +++   + +++ +   E +  N       V + 
Sbjct: 26  GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFR--NVGHDAEAVAF- 82
Query: 123 FSCDVVSAGNIKAIEMAID--GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
              DV S   I      +D  G++V +L+NN GI + K M   E++  +W  ++  NL  
Sbjct: 83  ---DVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMI--ELETADWQRVIDTNLTS 137
Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGS 205
              + +     M+ R  G IVNIGS
Sbjct: 138 AFMIGREAAKRMIPRGYGKIVNIGS 162

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN-PNTQINIVEYDFS 124
           AL+TGA+ GIG A A  L Q GL ++  +R    +E+++ E ++   P T I      + 
Sbjct: 35  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLI-----PYR 89
Query: 125 CDVVSAGNIKAIEMAIDGLEVGV--LINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           CD+ +  +I ++  AI     GV   INN G+  P  +         W D+  VN+   +
Sbjct: 90  CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGST--SGWKDMFNVNVLALS 147
Query: 183 RVTKAVLTGMMRR--KKGAIVNIGS 205
             T+     M  R    G I+NI S
Sbjct: 148 ICTREAYQSMKERNVDDGHIININS 172

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 76/144 (52%), Gaps = 11/144 (7%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGAT G+G+A A  L   G  + L      KL++++ E+       +I +   +
Sbjct: 10  GRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAEL-----GERIFVFPAN 64
Query: 123 FSC-DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
            S  + V A   KA E  + G+++  L+NN GIT  +   F  + +++W  ++ VNL   
Sbjct: 65  LSDREAVKALGQKA-EEEMGGVDI--LVNNAGIT--RDGLFVRMSDEDWDAVLTVNLTSV 119
Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
             +T+ +   MMRR+ G I+NI S
Sbjct: 120 FNLTRELTHPMMRRRNGRIINITS 143

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 76/144 (52%), Gaps = 11/144 (7%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGAT G+G+A A  L   G  + L      KL++++ E+       +I +   +
Sbjct: 7   GRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAEL-----GERIFVFPAN 61
Query: 123 FSC-DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
            S  + V A   KA E  + G+++  L+NN GIT  +   F  + +++W  ++ VNL   
Sbjct: 62  LSDREAVKALGQKA-EEEMGGVDI--LVNNAGIT--RDGLFVRMSDEDWDAVLTVNLTSV 116
Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
             +T+ +   MMRR+ G I+NI S
Sbjct: 117 FNLTRELTHPMMRRRNGRIINITS 140

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TG+  G+G A+A  LA  G  +I        L  I   + AE+ +T +    YD
Sbjct: 9   GKTALVTGSARGLGFAYAEGLAAAGARVI--------LNDIRATLLAESVDT-LTRKGYD 59
Query: 123 FSCDVVSAGNIKAIEMAI-----DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVN 177
                    +  AIE A      +G+ V +LINN GI Y K M   E++ + W  ++  N
Sbjct: 60  AHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMV--ELELENWQKVIDTN 117
Query: 178 LEGTTRVTKAVLTGMMRRKKGA-IVNIGS 205
           L     V+++    M+ R  G  I+NIGS
Sbjct: 118 LTSAFLVSRSAAKRMIARNSGGKIINIGS 146

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 7/149 (4%)
Query: 58  NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQIN 117
           +L   G  A++T  + G+G A A +LA++G  L+L SRN  KLE  ++ I +     Q++
Sbjct: 2   DLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVD 61
Query: 118 IVEYDFSCDVVSAGNI-KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRV 176
           IV    + D+   G+I +  E A D     +L+ + G   P+   F E+  ++W +  R+
Sbjct: 62  IV----AGDIREPGDIDRLFEKARDLGGADILVYSTG--GPRPGRFMELGVEDWDESYRL 115
Query: 177 NLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
                  V +     M+ +  G +V IGS
Sbjct: 116 LARSAVWVGRRAAEQMVEKGWGRMVYIGS 144

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 56  PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQ 115
           P +++      ++TG+  GIG+A+A  LA+ G  +++   N    E ++ +I A+   T 
Sbjct: 2   PGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG-GTA 60
Query: 116 INIVEYDFSCDVVSAGNIKAIE----MAIDGLEVGVLINNVGITYP-KAMFFHEVDEKEW 170
           I++     + DV    + KA+         G++   L+NN  I    K  F   +D + +
Sbjct: 61  ISV-----AVDVSDPESAKAMADRTLAEFGGID--YLVNNAAIFGGMKLDFLLTIDPEYY 113
Query: 171 MDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
              + VNL+G    T+AV   M +R  GAIVN  S AA
Sbjct: 114 KKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAA 151

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A +TG   G+G A + +L   G+ + +     N  + +S  +  E    +      DF  
Sbjct: 28  AFVTGGMGGLGAAISRRLHDAGMAVAVSHSERN--DHVSTWLMHERDAGR------DFKA 79
Query: 126 DVVSAGNIKAIEMAIDGL-----EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
             V   + ++ E   + +     +V VLINN GIT  +   F ++ + +W  ++R +L+ 
Sbjct: 80  YAVDVADFESCERCAEKVLADFGKVDVLINNAGIT--RDATFMKMTKGDWDAVMRTDLDA 137
Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGS 205
              VTK  + GM+ R+ G IVNIGS
Sbjct: 138 MFNVTKQFIAGMVERRFGRIVNIGS 162

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 48  IYITFLRQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI 107
           +Y   +  P +L   G  A++TGA  GIG+A AH  A+ G +++   R  + ++++++EI
Sbjct: 18  LYFQSMTGPFSLA--GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEI 74
Query: 108 QAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDE 167
                + +  + +     D+  A N+ A E+A     V VL+NN GI         EV  
Sbjct: 75  ADGGGSAEAVVADL---ADLEGAANV-AEELAAT-RRVDVLVNNAGIIARAPA--EEVSL 127
Query: 168 KEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
             W +++ VNL+    ++++  T M+    G IV I S
Sbjct: 128 GRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIAS 165

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 16/145 (11%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA+ GIG+A A +LA+ G  +I  +         + E  AE           +   
Sbjct: 31  AIVTGASRGIGRAIALELARRGAMVIGTA---------TTEAGAEGIGAAFKQAGLEGRG 81
Query: 126 DVVSAGNIKAIEMAIDGL--EVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
            V++  +  A++  ++    E G   VL+NN GIT  +      + + EW  ++  NL+ 
Sbjct: 82  AVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQ--LAMRMKDDEWDAVIDTNLKA 139
Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGS 205
             R+++AVL  MM+ + G IVNI S
Sbjct: 140 VFRLSRAVLRPMMKARGGRIVNITS 164

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
Query: 56  PKNLKS-YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNT 114
           PK  KS  G   LITGA  GIG+  A++ A+    L+L   N + LE+ + + +      
Sbjct: 23  PKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKV 82
Query: 115 QINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIV 174
              +V+     D+ S+      E+     +V +L+NN G+ Y   +F     + +     
Sbjct: 83  HTFVVDCSNREDIYSSAKKVKAEIG----DVSILVNNAGVVYTSDLF--ATQDPQIEKTF 136
Query: 175 RVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            VN+      TKA L  M +   G IV + S A  V
Sbjct: 137 EVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV 172

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA+ GIG A A   A+ G  ++    N   +++     +A   N       + 
Sbjct: 34  GKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINA------HG 87
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
           + CDV     I+A+   I+  EVG   +L+NN GI     M   E+   ++  ++ ++L 
Sbjct: 88  YVCDVTDEDGIQAMVAQIES-EVGIIDILVNNAGIIRRVPMI--EMTAAQFRQVIDIDLN 144
Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGS 205
               V+KAV+  M+++  G I+NI S
Sbjct: 145 APFIVSKAVIPSMIKKGHGKIINICS 170

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
            ITGAT G G+A A + A+ G +L+L  R   +L+ ++ E+ A+     + +   D +  
Sbjct: 25  FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAX 84
Query: 127 VVSAGNIKAIEMAIDGLEVGVLINNVGI---TYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
             +  N+      + G     LINN G+   T P        D  +W   V  N++G   
Sbjct: 85  SAAVDNLPEEFATLRG-----LINNAGLALGTDPA----QSCDLDDWDTXVDTNIKGLLY 135
Query: 184 VTKAVLTGMMRRKKGA-IVNIGS 205
            T+ +L  ++    GA IVN+GS
Sbjct: 136 STRLLLPRLIAHGAGASIVNLGS 158

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           L+TGA+DGIG+  A   A++G  +IL+ RN  KL ++++ I  E        +    +C 
Sbjct: 18  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 77
Query: 127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTK 186
                 + A  +A++   +  +++N G+         E D + W D+++VN+  T  +T+
Sbjct: 78  SEDCQQL-AQRIAVNYPRLDGVLHNAGL-LGDVCPMSEQDPQVWQDVMQVNVNATFMLTQ 135
Query: 187 AVLTGMMRRKKGAIV 201
           A+L  +++   G++V
Sbjct: 136 ALLPLLLKSDAGSLV 150

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 15/145 (10%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+T +TDGIG A A +LAQ G ++++ SR    +++    +Q E  +    +      C
Sbjct: 17  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV------C 70
Query: 126 DVVSAGNI-KAIEMAIDGLEVGV--LINNVGITYPKAMFFHEVDEKE--WMDIVRVNLEG 180
            V  A +  + + MA++ L  GV  L++N  +      F + +D  E  W  I+ VN++ 
Sbjct: 71  HVGKAEDRERLVAMAVN-LHGGVDILVSNAAVN---PFFGNIIDATEEVWDKILHVNVKA 126
Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGS 205
           T  +TKAV+  M +R  G+++ + S
Sbjct: 127 TVLMTKAVVPEMEKRGGGSVLIVSS 151

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           A +TG   GIG +   +L + G  ++     N  +  K   + +A         + +DF 
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA---------LGFDFY 66
Query: 125 CDVVSAGNIKAIEMAIDGL-----EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
               + G+  + + A D +     E+ VL+NN GIT  + + F ++  ++W  ++  NL 
Sbjct: 67  ASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGIT--RDVVFRKMTREDWQAVIDTNLT 124
Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGS 205
               VTK V+ GM+ R  G I+NI S
Sbjct: 125 SLFNVTKQVIDGMVERGWGRIINISS 150

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 26/146 (17%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNT---QINIVE-YD 122
           +ITGA+ GIG+A A + ++ G  L+L++R   +L+ ++       PNT   Q+++ + Y 
Sbjct: 20  VITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYT 73
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEK---EWMDIVRVNLE 179
           F   +  A  I     AI        +NN G+     M   ++D +   EW  +  VN+ 
Sbjct: 74  FDTAITRAEKIYGPADAI--------VNNAGM-----MLLGQIDTQEANEWQRMFDVNVL 120
Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGS 205
           G     +AVL  M  R  G I+NI S
Sbjct: 121 GLLNGMQAVLAPMKARNCGTIINISS 146

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS- 124
           A+ITGA+ GIG+A A  LA+ G  L L +R+ ++LEKI++E+  E    ++     D S 
Sbjct: 27  AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSK 85
Query: 125 CDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
            + V   + K +E   D   V V++ N G+ Y K +     +E   M  + VNL G  R 
Sbjct: 86  AESVEEFSKKVLERFGD---VDVVVANAGLGYFKRLEELSEEEFHEM--IEVNLLGVWRT 140
Query: 185 TKAVLTGMMR 194
            KA L  + R
Sbjct: 141 LKAFLDSLKR 150

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS- 124
           A+ITGA+ GIG+A A  LA+ G  L L +R+ ++LEKI++E+  E    ++     D S 
Sbjct: 5   AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSK 63
Query: 125 CDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
            + V   + K +E   D   V V++ N G+ Y K +     +E   M  + VNL G  R 
Sbjct: 64  AESVEEFSKKVLERFGD---VDVVVANAGLGYFKRLEELSEEEFHEM--IEVNLLGVWRT 118
Query: 185 TKAVLTGMMR 194
            KA L  + R
Sbjct: 119 LKAFLDSLKR 128

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 16/142 (11%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDF--- 123
           L+TGA+DGIG+  A   A++G  +IL+ RN  KL +++  I A+  + Q      D    
Sbjct: 18  LVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHI-ADEQHVQPQWFTLDLLTC 76
Query: 124 ---SCDVVSAGNIKAIEMAIDG-LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
               C  V A  I A    +DG L    L+  +G          E D + W D+++VN+ 
Sbjct: 77  TAEECRQV-ADRIAAHYPRLDGVLHNAGLLGEIGP-------MSEQDPQIWQDVMQVNVN 128
Query: 180 GTTRVTKAVLTGMMRRKKGAIV 201
            T  +T+A+L  +++   G++V
Sbjct: 129 ATFMLTQALLPLLLKSDAGSLV 150

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 17/147 (11%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G+ A +TGA  GIG       A  G  LIL+ R    L++ + E+ A         V   
Sbjct: 11  GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAA--------VAAR 62
Query: 123 FSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFH---EVDEKEWMDIVRVNL 178
              DV  A  + A     + +  V +L+N+ GI        H   E D+  W  ++ VN+
Sbjct: 63  IVADVTDAEAMTAAAAEAEAVAPVSILVNSAGIAR-----LHDALETDDATWRQVMAVNV 117
Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGS 205
           +G    ++A    M+ R  GAIVN+GS
Sbjct: 118 DGMFWASRAFGRAMVARGAGAIVNLGS 144

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 59  LKSYGSWALITGATDGIGKAFAHQLAQHGLNLIL---------VSRNHNKLEKISNEIQA 109
           L+  G   L+TGA  G+G+A+A   A+ G  +++         V +     +K+  EI+ 
Sbjct: 26  LRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRR 85
Query: 110 ENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEK 168
                  N        D V  G  K ++ A+D    + V++NN GI   ++  F  + ++
Sbjct: 86  RGGKAVANY-------DSVEEGE-KVVKTALDAFGRIDVVVNNAGILRDRS--FARISDE 135
Query: 169 EWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
           +W  I RV+L G+ +VT+A    M ++K G I+   S + I
Sbjct: 136 DWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGI 176

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 59  LKSYGSWALITGATDGIGKAFAHQLAQHGLNLIL---------VSRNHNKLEKISNEIQA 109
           L+  G   L+TGA  G+G+A+A   A+ G  +++         V +  +  +K+  EI+ 
Sbjct: 5   LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR 64
Query: 110 ENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEK 168
                  N        D V AG  K ++ A+D    + V++NN GI   ++  F  + ++
Sbjct: 65  RGGKAVANY-------DSVEAGE-KLVKTALDTFGRIDVVVNNAGILRDRS--FSRISDE 114
Query: 169 EWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
           +W  I RV+L G+ +VT+A      ++  G I+   S + I
Sbjct: 115 DWDIIQRVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGI 155

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 70/147 (47%), Gaps = 16/147 (10%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA  GIGKA A +LA  G  +I+   N    +  +  I  +            
Sbjct: 6   GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKK---------ARA 56
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVG--VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
            + D+   G++KA+   I  L  G  +L+NN  I    A  + +VD   W  I+ VNL G
Sbjct: 57  IAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVA--WDDVDLDHWRKIIDVNLTG 114
Query: 181 TTRVTKAVLTGMMRR--KKGAIVNIGS 205
           T  VT+A  T  MR   K G +++I S
Sbjct: 115 TFIVTRA-GTDQMRAAGKAGRVISIAS 140

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           L+TGA+DGIG+  A   A++G  +IL+ RN  KL ++++ I  E        +    +C 
Sbjct: 16  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 75
Query: 127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTK 186
             +   + A  +A++   +  +++N G+         E + + W D+++VN+  T  +T+
Sbjct: 76  SENCQQL-AQRIAVNYPRLDGVLHNAGL-LGDVCPMSEQNPQVWQDVMQVNVNATFMLTQ 133
Query: 187 AVLTGMMRRKKGAIV 201
           A+L  +++   G++V
Sbjct: 134 ALLPLLLKSDAGSLV 148

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+T +TDGIG A A +LAQ G ++++ SR    +++    +Q E  +    +      C
Sbjct: 18  ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTV------C 71
Query: 126 DVVSAGNIKAIEMAIDGLEVG--VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
            V  A + + +      L  G  +L++N  +  P      +V E+ W   + +N++    
Sbjct: 72  HVGKAEDRERLVATAVKLHGGIDILVSNAAVN-PFFGSIMDVTEEVWDKTLDINVKAPAL 130
Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAA 208
           +TKAV+  M +R  G++V + S AA
Sbjct: 131 MTKAVVPEMEKRGGGSVVIVSSIAA 155

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 17/151 (11%)
Query: 67  LITGATDGIGKAFAHQLAQHGLN-------LILVSRNHNKLEKISNEIQAENPNTQINIV 119
           LITGA  GIG+A A + A+   +       L+L SR    LEKIS E +AE   T     
Sbjct: 6   LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT--- 62
Query: 120 EYDFSCDVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVN 177
               + D+    +++ +   I      +  L+NN G+    A+   ++ E+++   +  N
Sbjct: 63  ---ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGAL--SDLTEEDFDYTMNTN 117
Query: 178 LEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
           L+GT  +T+A+   M R+  G I  I S AA
Sbjct: 118 LKGTFFLTQALFALMERQHSGHIFFITSVAA 148

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           L+TGA+ G G+A A      G  +I  +R    L    +++ A  P+    I     S D
Sbjct: 9   LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEAL----DDLVAAYPDRAEAI-----SLD 59
Query: 127 VVSAGNIKAIEMAIDGL----EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           V     I  +  A D L     V VL+NN G T   A  F E  E+E  D+  +++ G  
Sbjct: 60  VTDGERIDVV--AADVLARYGRVDVLVNNAGRTQVGA--FEETTERELRDLFELHVFGPA 115
Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
           R+T+A+L     R  G++VNI S
Sbjct: 116 RLTRALLPQXRERGSGSVVNISS 138

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITG  +GIG+A A + A  G ++ +     + +     E    N   ++  V+    C
Sbjct: 10  AVITGGANGIGRAIAERFAVEGADIAIA----DLVPAPEAEAAIRNLGRRVLTVK----C 61
Query: 126 DVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV   G+++A    +        +L+NN GI YP  + F E+  ++W     +N++    
Sbjct: 62  DVSQPGDVEAFGKQVISTFGRCDILVNNAGI-YP-LIPFDELTFEQWKKTFEINVDSGFL 119
Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
           + KA + GM R   G I+N+ S
Sbjct: 120 MAKAFVPGMKRNGWGRIINLTS 141

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A+ITG++ GIG A A   A+ G +++LV+R  ++L + +  ++      +  +   +
Sbjct: 7   GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLK-----EKFGVRVLE 61
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVG--VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
            + DV +   + A+  ++     G  +L+NN G T          DEK W     +++  
Sbjct: 62  VAVDVATPEGVDAVVESVRSSFGGADILVNNAG-TGSNETIMEAADEK-WQFYWELHVMA 119
Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
             R+ + ++ GM  R  GAI++  S  A+
Sbjct: 120 AVRLARGLVPGMRARGGGAIIHNASICAV 148

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 29/145 (20%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           ++TGA+ GIG+A A +    G  +I +S  H+  E   + I+                CD
Sbjct: 12  IVTGASMGIGRAIAERFVDEGSKVIDLS-IHDPGEAKYDHIE----------------CD 54
Query: 127 VVSAGNIKAIEMAIDGL-----EVGVLINNVGI-TYPKAMFFHEVDEKEWMDIVRVNLEG 180
           V +   +KA   +ID +      + VL+NN GI +Y K      +   EW  I+ VNL G
Sbjct: 55  VTNPDQVKA---SIDHIFKEYGSISVLVNNAGIESYGK---IESMSMGEWRRIIDVNLFG 108
Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGS 205
               +K  +  M+R +  +IVNI S
Sbjct: 109 YYYASKFAIPYMIRSRDPSIVNISS 133

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TG + G+G   A  LA+ G ++++ SRN   LE+ S    A+    +  +    
Sbjct: 21  GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN---LEEASE--AAQKLTEKYGVETMA 75
Query: 123 FSCDVVSAGNIKAIEMAIDGL--EVGVLINNVGIT--YPKAMFFHEVDEKEWMDIVRVNL 178
           F CDV +   +K +  A+     ++  ++N  GI   +P   F  +    E+  ++ VNL
Sbjct: 76  FRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLD----EFRQVIEVNL 131
Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGS 205
            GT  V +   + +      +I+NIGS
Sbjct: 132 FGTYYVCREAFSLLRESDNPSIINIGS 158

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 29/145 (20%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           ++TGA+ GIG+A A +    G  +I +S  H+  E   + I+                CD
Sbjct: 19  IVTGASMGIGRAIAERFVDEGSKVIDLS-IHDPGEAKYDHIE----------------CD 61
Query: 127 VVSAGNIKAIEMAIDGL-----EVGVLINNVGI-TYPKAMFFHEVDEKEWMDIVRVNLEG 180
           V +   +KA   +ID +      + VL+NN GI +Y K      +   EW  I+ VNL G
Sbjct: 62  VTNPDQVKA---SIDHIFKEYGSISVLVNNAGIESYGK---IESMSMGEWRRIIDVNLFG 115
Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGS 205
               +K  +  M+R +  +IVNI S
Sbjct: 116 YYYASKFAIPYMIRSRDPSIVNISS 140

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A +TG + GIG A A  LA  G+ +   +R+   +    + ++A   +   +      SC
Sbjct: 27  AFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGS------SC 80
Query: 126 DVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV S   + A   A       +G+L+N+ G          ++D+  W D++  NL G  R
Sbjct: 81  DVTSTDEVHAAVAAAVERFGPIGILVNSAGRN--GGGETADLDDALWADVLDTNLTGVFR 138
Query: 184 VTKAVLT--GMMRRKKGAIVNIGS 205
           VT+ VL   GM     G IVNI S
Sbjct: 139 VTREVLRAGGMREAGWGRIVNIAS 162

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 14/153 (9%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++TG+T GIG A A +LA+ G ++++      + E I  E       ++  +  Y 
Sbjct: 4   GKKAVVTGSTSGIGLAMATELAKAGADVVI--NGFGQPEDIERE--RSTLESKFGVKAYY 59
Query: 123 FSCDVVSAGNI-----KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVN 177
            + D+  A        KA E A+ GL+  +L+NN GI +   +    VD  +W  I+ +N
Sbjct: 60  LNADLSDAQATRDFIAKAAE-ALGGLD--ILVNNAGIQHTAPIEEFPVD--KWNAIIALN 114
Query: 178 LEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           L      T A L  M ++  G I+NI S   +V
Sbjct: 115 LSAVFHGTAAALPIMQKQGWGRIINIASAHGLV 147

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 16/147 (10%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA  GIGKA A +LA  G  +I+   N    +  +  I  +            
Sbjct: 6   GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKK---------ARA 56
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVG--VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
            + D+   G++KA+   I  L  G  +L+NN  I     + + +VD   W  I+ VNL G
Sbjct: 57  IAADISDPGSVKALFAEIQALTGGIDILVNNASIV--PFVAWDDVDLDHWRKIIDVNLTG 114
Query: 181 TTRVTKAVLTGMMRR--KKGAIVNIGS 205
           T  VT+A  T   R   K G +++I S
Sbjct: 115 TFIVTRA-GTDQXRAAGKAGRVISIAS 140

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           L+TG   GIG A A   A  G  + +  R+             E P   + +      CD
Sbjct: 25  LVTGGNRGIGLAIARAFADAGDKVAITYRS------------GEPPEGFLAV-----KCD 67
Query: 127 VVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           +    + + +E A   +E     V VLI N G+T  K      + E+++  +V  NL GT
Sbjct: 68  IT---DTEQVEQAYKEIEETHGPVEVLIANAGVT--KDQLLMRMSEEDFTSVVETNLTGT 122
Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
            RV K     M+R KKG +V I S
Sbjct: 123 FRVVKRANRAMLRAKKGRVVLISS 146

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           L+TGA+DGIG+  A   A++G  +IL+ RN  KL ++++ I  E        +    +C 
Sbjct: 14  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 73
Query: 127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTK 186
             +   + A  + ++   +  +++N G+         E + + W D++++N+  T  +T+
Sbjct: 74  SENCQQL-AQRIVVNYPRLDGVLHNAGL-LGDVCPMSEQNPQVWQDVMQINVNATFMLTQ 131
Query: 187 AVLTGMMRRKKGAIV 201
           A+L  +++   G++V
Sbjct: 132 ALLPLLLKSDAGSLV 146

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A+ITG T GIG A A +  + G  +++  R+ +  EK +  +   +   QI   ++D
Sbjct: 6   GKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPD---QIQFFQHD 62
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            S +        A E A     V  L+NN GI   K++   E    EW  ++ VNL+G  
Sbjct: 63  SSDEDGWTKLFDATEKAFG--PVSTLVNNAGIAVNKSV--EETTTAEWRKLLAVNLDGVF 118
Query: 183 RVTKAVLTGMMRRKKGA-IVNIGS 205
             T+  +  M  +  GA I+N+ S
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSS 142

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 56  PKNLKSY-GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNT 114
           P ++  + G  ALITG   G+G++ A  LA+ G ++ +  R  N          A++   
Sbjct: 2   PGSMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAE 61
Query: 115 QINIVEYDFSCDVVSAGNIK---AIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVD 166
            + +VE      + +  ++K   A+E  +   E     + + I N GI+        EV+
Sbjct: 62  TVALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIS--TIALLPEVE 119
Query: 167 EKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
             +W +++  NL GT     AV  GM++R  G IV + S
Sbjct: 120 SAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSS 158

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A+ITG T GIG A A +  + G  +++  R+ +  EK +  +   +   QI   ++D
Sbjct: 6   GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD---QIQFFQHD 62
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            S +        A E A     V  L+NN GI   K++   E    EW  ++ VNL+G  
Sbjct: 63  SSDEDGWTKLFDATEKAFG--PVSTLVNNAGIAVNKSV--EETTTAEWRKLLAVNLDGVF 118
Query: 183 RVTKAVLTGMMRRKKGA-IVNIGS 205
             T+  +  M  +  GA I+N+ S
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSS 142

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 6/152 (3%)
Query: 58  NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQIN 117
           +L+     A+ITGA+ GIG   A  LA  G  ++L++R+   LEK+ +EI   N + Q  
Sbjct: 2   SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEP 61
Query: 118 IV-EYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRV 176
           IV   D +    +   IK I      +++ V   N    +        VD   +  I  +
Sbjct: 62  IVLPLDITDCTKADTEIKDIHQKYGAVDILV---NAAAXFXDGSLSEPVD--NFRKIXEI 116
Query: 177 NLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
           N+     + K V      +K G I N+ S AA
Sbjct: 117 NVIAQYGILKTVTEIXKVQKNGYIFNVASRAA 148

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A+ITG++ GIG A A   A+ G +++LV+R  ++L + +  ++      +  +   +
Sbjct: 7   GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLK-----EKFGVRVLE 61
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVG--VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
            + DV +   + A+  ++     G  +L+NN G T          DEK W     + +  
Sbjct: 62  VAVDVATPEGVDAVVESVRSSFGGADILVNNAG-TGSNETIMEAADEK-WQFYWELLVMA 119
Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
             R+ + ++ GM  R  GAI++  S  A+
Sbjct: 120 AVRLARGLVPGMRARGGGAIIHNASICAV 148

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 58  NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQIN 117
           NL+  G  A+ITGA  GIGK  A   A  G ++++   N +    + +EIQ      Q+ 
Sbjct: 6   NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ------QLG 59
Query: 118 IVEYDFSCDVVSAGNIKAI-EMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVR 175
              +   CD+ S   + A+ + AI  L +V +L+NN G   PK       D +   ++  
Sbjct: 60  GQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYEL-- 117
Query: 176 VNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
            N+     +++ V   M +   G I+ I S AA
Sbjct: 118 -NVFSFFHLSQLVAPEMEKNGGGVILTITSMAA 149

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI-QAENPNTQINIVEYDFSC 125
           +ITG+++GIG+  A   AQ G N+ +  R+  +LE+    I ++     Q+N V  D + 
Sbjct: 10  IITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT 69
Query: 126 DVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDI----VRVNLEG 180
           +    G  + I   +    ++ VL+NN G   P A  F      + +DI    +++NL+ 
Sbjct: 70  E---DGQDQIINSTLKQFGKIDVLVNNAGAAIPDA--FGTTGTDQGIDIYHKTLKLNLQA 124
Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGS 205
              +TK V   ++   KG IVN+ S
Sbjct: 125 VIEMTKKVKPHLV-ASKGEIVNVSS 148

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 16/146 (10%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQI------NIV 119
           ALITGA+ GIG+A A +LA+ G  L  +    N+ +      +A    + +      N++
Sbjct: 4   ALITGASRGIGRAIALRLAEDGFALA-IHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62
Query: 120 EYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
           E + +  +V     +A E+ + GL+   L+NN GIT  +      + +++W  ++  NL 
Sbjct: 63  EAEAATALVH----QAAEV-LGGLD--TLVNNAGIT--RDTLLVRMKDEDWEAVLEANLS 113
Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGS 205
              R T+  +  MM+ + G IVNI S
Sbjct: 114 AVFRTTREAVKLMMKARFGRIVNITS 139

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A ITGA  G G+  A +LAQ G +++ +     +      +   E     + +VE  
Sbjct: 46  GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ 105
Query: 123 ------FSCDVVSAGNIKAI--EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIV 174
                    DV    +++A+  E   +   + +L++NVGI+    +    + +++W DI+
Sbjct: 106 GRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVV--SLTDQQWSDIL 163
Query: 175 RVNLEGTTRVTKAVLTGMMRRKKGAIV 201
           + NL G     +AVL  M+ R +G  V
Sbjct: 164 QTNLIGAWHACRAVLPSMIERGQGGSV 190

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 16/122 (13%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDF--- 123
           L+TGA+DGIG+  A   A++G  +IL+ RN  KL +++  I A+  + Q      D    
Sbjct: 19  LVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHI-ADEQHVQPQWFTLDLLTC 77
Query: 124 ---SCDVVSAGNIKAIEMAIDG-LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
               C  V A  I A    +DG L    L+  +G   P +    E D + W D+ +VN+ 
Sbjct: 78  TAEECRQV-ADRIAAHYPRLDGVLHNAGLLGEIG---PXS----EQDPQIWQDVXQVNVN 129
Query: 180 GT 181
            T
Sbjct: 130 AT 131

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           ALITGA  GIG+A A  LA  G+ +  + R   ++E++++EI       Q   +E D S 
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSD 88
Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           ++     ++ + +    L+  +++ N GI    A    ++   EW + + VNL GT    
Sbjct: 89  ELQXRNAVRDLVLKFGHLD--IVVANAGINGVWAP-IDDLKPFEWDETIAVNLRGTFLTL 145
Query: 186 KAVLTGMMRRKKGAIVNIGS 205
              +  + +R  GAIV + S
Sbjct: 146 HLTVPYLKQRGGGAIVVVSS 165

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 68/155 (43%), Gaps = 21/155 (13%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G   L+TGA   IG A A +LA+ G  + L+  N   LEK      AE    +  +    
Sbjct: 7   GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEK------AEASVREKGVEARS 60
Query: 123 FSCDVVSAGNIKAIEMAIDGL-----EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRV- 176
           + CDV S    +A+   +D +     ++  L NN G  Y  A  F  V +    D  RV 
Sbjct: 61  YVCDVTSE---EAVIGTVDSVVRDFGKIDFLFNNAG--YQGA--FAPVQDYPSDDFARVL 113
Query: 177 --NLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
             N+ G   V KAV   M+ +  G IVN  S A +
Sbjct: 114 TINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGV 148

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G   L+TGA  GIG+     L   G  ++ VSR    L+ +  E     P          
Sbjct: 7   GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEP---------- 56
Query: 123 FSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
             C  V  G+ +A E A+  +  V +L+NN  +   +   F EV ++ +     VNL   
Sbjct: 57  -VC--VDLGDWEATERALGSVGPVDLLVNNAAVALLQP--FLEVTKEAFDRSFEVNLRAV 111
Query: 182 TRVTKAVLTGMMRRK-KGAIVNIGS 205
            +V++ V  G++ R   GAIVN+ S
Sbjct: 112 IQVSQIVARGLIARGVPGAIVNVSS 136

>pdb|3D3W|B Chain B, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 245

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G   L+TGA  GIG+     L   G  ++ VSR    L+ +  E     P          
Sbjct: 7   GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEP---------- 56
Query: 123 FSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
             C  V  G+ +A E A+  +  V +L+NN  +   +   F EV ++ +     VNL   
Sbjct: 57  -VC--VDLGDWEATERALGSVGPVDLLVNNAAVALLQP--FLEVTKEAFDRSFEVNLRAV 111
Query: 182 TRVTKAVLTGMMRRK-KGAIVNIGS 205
            +V++ V  G++ R   GAIVN+ S
Sbjct: 112 IQVSQIVARGLIARGVPGAIVNVSS 136

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G   L+TGA  GIG+     L   G  ++ VSR    L+ +  E     P          
Sbjct: 7   GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEP---------- 56
Query: 123 FSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
             C  V  G+ +A E A+  +  V +L+NN  +   +   F EV ++ +     VNL   
Sbjct: 57  -VC--VDLGDWEATERALGSVGPVDLLVNNAAVALLQP--FLEVTKEAFDRSFEVNLRAV 111
Query: 182 TRVTKAVLTGMMRRK-KGAIVNIGS 205
            +V++ V  G++ R   GAIVN+ S
Sbjct: 112 IQVSQIVARGLIARGVPGAIVNVSS 136

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TG+T GIG   A  LA+ G N++L     N     +  + AE     +  V + 
Sbjct: 4   GKTALVTGSTSGIGLGIAQVLARAGANIVL-----NGFGDPAPAL-AEIARHGVKAVHH- 56
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVG---VLINNVGITY--PKAMFFHEVDEKEWMDIVRVN 177
              D+     I+A+  A+   E G   +L+NN GI +  P   F  E     W  I+ +N
Sbjct: 57  -PADLSDVAQIEAL-FALAEREFGGVDILVNNAGIQHVAPVEQFPLE----SWDKIIALN 110
Query: 178 LEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
           L      T+  L GM  R  G I+NI S
Sbjct: 111 LSAVFHGTRLALPGMRARNWGRIINIAS 138

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 17/154 (11%)
Query: 56  PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQ 115
           P  L+  G  ALITGA+ GIG+A A  LA  G  + + +R   KL  + +E+ A     +
Sbjct: 2   PSALQ--GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA--AGAK 57
Query: 116 INIVEYDFS----CDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWM 171
           ++++E D +     D   A  ++    A+ GL+  +L+NN GI     +   + D  +W 
Sbjct: 58  VHVLELDVADRQGVDAAVASTVE----ALGGLD--ILVNNAGIMLLGPV--EDADTTDWT 109
Query: 172 DIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
            ++  NL G   +T+A L  ++ R KG +V + S
Sbjct: 110 RMIDTNLLGLMYMTRAALPHLL-RSKGTVVQMSS 142

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           L+TGA+DGIG+  A   A++G  +IL+ RN  KL ++++ I  E        +    +C 
Sbjct: 16  LVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 75
Query: 127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
             +   + A  +A++   +  +++N G+         E + + W D+ +VN+  T
Sbjct: 76  SENCQQL-AQRIAVNYPRLDGVLHNAGL-LGDVCPXSEQNPQVWQDVXQVNVNAT 128

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  +LITGA+ GIG A A  L + G  +I+   N  KL+ + N ++        N+   +
Sbjct: 14  GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKE 73
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
              +++S  +            + +L+ N GIT         + ++++  ++ +NL+   
Sbjct: 74  ECSNLISKTS-----------NLDILVCNAGITSDTLAI--RMKDQDFDKVIDINLKANF 120
Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
            + +  +  M++++ G I+NI S
Sbjct: 121 ILNREAIKKMIQKRYGRIINISS 143

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI-QAENPNTQINIVEY 121
           G   +ITG+++GIG++ A   A+ G  + +  RN ++LE+   +I +A  P  +IN V  
Sbjct: 26  GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVA 85
Query: 122 DFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           D + +     +I    +A  G ++ +L+NN G          +   + +    ++N +  
Sbjct: 86  DVT-EASGQDDIINTTLAKFG-KIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 143
Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
             +T+     ++ + KG IVN+ S
Sbjct: 144 IEMTQKTKEHLI-KTKGEIVNVSS 166

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQ-INIVEYDFS 124
           A+ITG+++GIG+A A   A+ G  + +  R+  +LE+   +I A   + Q +N V  D +
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68
Query: 125 CDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDE--KEWMDIVRVNLEGT 181
            D   AG  + +   +    ++ +L+NN G   P +       +  + +   + +NL   
Sbjct: 69  TD---AGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSV 125
Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
             +TK  +   +   KG IVNI S
Sbjct: 126 IALTKKAVP-HLSSTKGEIVNISS 148

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TG + GIG A    L + G  +   +R+  +L    + ++   P  ++    +   C
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARL----FASVC 66
Query: 126 DVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV+ A  ++A   A +       +L+NN G    +   F E  ++ W + +++       
Sbjct: 67  DVLDALQVRAFAEACERTLGCASILVNNAG--QGRVSTFAETTDEAWSEELQLKFFSVIH 124
Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
             +A L  +  R   AIV + S
Sbjct: 125 PVRAFLPQLESRADAAIVCVNS 146

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRN--HNKLEKISNEIQAENPNTQINI-V 119
           G  A++TGA  GIG   A   A+ G  ++ +  +     L+++++++      T + + V
Sbjct: 213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVG----GTALTLDV 268
Query: 120 EYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
             D + D      I A      G +V +L+NN GIT  K      +DEK W  ++ VNL 
Sbjct: 269 TADDAVD-----KITAHVTEHHGGKVDILVNNAGITRDK--LLANMDEKRWDAVIAVNLL 321
Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              R+T+ ++      + G ++ + S A I 
Sbjct: 322 APQRLTEGLVGNGTIGEGGRVIGLSSMAGIA 352

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TG    IG A    LA+ G  +I+   +     K   +++ E          +D S 
Sbjct: 16  AIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG---------HDVSS 66
Query: 126 DVVSAGNIKAIEMAIDGL-----EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
            V+   N ++++ A+  +      V +L+   GI   + +   ++ + +W+  V +NL G
Sbjct: 67  VVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISE-VKAEDMTDGQWLKQVDINLNG 125
Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             R  +AV   M+ +K+G IV IGS + ++
Sbjct: 126 MFRSCQAVGRIMLEQKQGVIVAIGSMSGLI 155

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           LITGA  G+GK +A   A++G  +++   +     K  +EI+A       +  ++D + D
Sbjct: 326 LITGAGAGLGKEYAKWFAKYGAKVVV--NDFKDATKTVDEIKAAGGEAWPD--QHDVAKD 381
Query: 127 VVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
             +      I+  ID    + +L+NN GI   ++  F ++ ++EW  + +V+L GT  ++
Sbjct: 382 SEAI-----IKNVIDKYGTIDILVNNAGILRDRS--FAKMSKQEWDSVQQVHLIGTFNLS 434
Query: 186 KAVLTGMMRRKKGAIVNIGSGAAI 209
           +      + ++ G I+NI S + I
Sbjct: 435 RLAWPYFVEKQFGRIINITSTSGI 458

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA  GIG+     L   G  ++ V+R ++ L  ++ E     P          
Sbjct: 7   GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEP---------- 56
Query: 123 FSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
             C  V  G+  A E A+ G+  V +L+NN  +   +   F EV ++ +     VNL   
Sbjct: 57  -VC--VDLGDWDATEKALGGIGPVDLLVNNAALVIMQP--FLEVTKEAFDRSFSVNLRSV 111
Query: 182 TRVTKAVLTGMMRRK-KGAIVNIGS 205
            +V++ V   M+ R   G+IVN+ S
Sbjct: 112 FQVSQMVARDMINRGVPGSIVNVSS 136

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 27/144 (18%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           L+TG   GIG A A +LA  G  + +  R     + +                 +   CD
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----------------FGVECD 61
Query: 127 VVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           V  +    A++ A   +E     V VL++N G++     F   + E+++  ++  NL G 
Sbjct: 62  VTDS---DAVDRAFTAVEEHQGPVEVLVSNAGLSAD--AFLMRMTEEKFEKVINANLTGA 116
Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
            RV +     M R K G ++ IGS
Sbjct: 117 FRVAQRASRSMQRNKFGRMIFIGS 140

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 58  NLKSY-GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQI 116
           +LK + G  A +TG  +G+G     QL   G  + +     + ++K    ++AE    ++
Sbjct: 2   SLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEV 61
Query: 117 NIVEYDFSCDVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWM 171
             V+ D +       + +  +MA D +E     V +L NN G+   + +     D+ +W+
Sbjct: 62  MGVQLDVA-------SREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWL 114
Query: 172 DIVRVNLEGTTRVTKAVLTGMMRR------KKGAIVNIGSGAAIV 210
             + VNL G        +  M+ R      K G +VN  S AA +
Sbjct: 115 --LGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL 157

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           L+TG T GIG+  A   A+ G N+ + +R+  +L  ++ E+        I  V  D S  
Sbjct: 45  LVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIG-VRLDVSDP 103
Query: 127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTK 186
              A   + +  A   L+  V+  N GI +P+A     +  ++  +++ VN++GT    +
Sbjct: 104 GSCADAARTVVDAFGALD--VVCANAGI-FPEAR-LDTMTPEQLSEVLDVNVKGTVYTVQ 159
Query: 187 AVLTGMMRRKKGAIV 201
           A L  +    +G ++
Sbjct: 160 ACLAPLTASGRGRVI 174

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Query: 56  PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQ 115
           P  L+  G  ALITGA+ GIG+A A  LA  G  + + +R   KL  + +E+ A     +
Sbjct: 2   PSALQ--GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA--AGAK 57
Query: 116 INIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVR 175
           ++++E D +        + +   A+ GL+  +L+NN GI     +   + D  +W   + 
Sbjct: 58  VHVLELDVADRQGVDAAVASTVEALGGLD--ILVNNAGIXLLGPV--EDADTTDWTRXID 113
Query: 176 VNLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
            NL G    T+A L  ++ R KG +V   S
Sbjct: 114 TNLLGLXYXTRAALPHLL-RSKGTVVQXSS 142

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 14/144 (9%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNL-ILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           L+TGA+ GIG+A A QLA  G N+ +   R+    ++  N I A   N ++       S 
Sbjct: 30  LVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRL------LSF 83
Query: 126 DVVSAGNIKAI---EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           DV +    + +   E+A  G   GV ++N GI    A  F  +   +W  ++  NL+   
Sbjct: 84  DVANREQCREVLEHEIAQHGAWYGV-VSNAGIARDAA--FPALSNDDWDAVIHTNLDSFY 140
Query: 183 RVTKAVLTGMM-RRKKGAIVNIGS 205
            V +  +  M+  R+ G I+ + S
Sbjct: 141 NVIQPCIMPMIGARQGGRIITLSS 164

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 12/142 (8%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  ALITGA+ GIGK  A   A+ G  + + +R+ + L+ +++EI        +      
Sbjct: 32  GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG------VGGKALP 85
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
             CDV     ++ +   + G E+G   + + N GI   +AM   ++  +E+  I   N+ 
Sbjct: 86  IRCDVTQPDQVRGMLDQMTG-ELGGIDIAVCNAGIVSVQAML--DMPLEEFQRIQDTNVT 142
Query: 180 GTTRVTKAVLTGMMRRKKGAIV 201
           G     +A    M+ +  G  +
Sbjct: 143 GVFLTAQAAARAMVDQGLGGTI 164

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 59  LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINI 118
           L+  G  ALITGAT GIG   A   A  G  L+L  R+ ++L+     +  E   T ++ 
Sbjct: 16  LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRAL-GEQFGTDVHT 74
Query: 119 VEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
           V  D +     A   +    A  GL+  VL+NN GI++P+ +   + D + +   + VNL
Sbjct: 75  VAIDLAEPDAPAELARRAAEAFGGLD--VLVNNAGISHPQPVV--DTDPQLFDATIAVNL 130
Query: 179 EGTTRVTKAVLTGMMRRKKGAIV 201
                +  AV   M+   +G  +
Sbjct: 131 RAPALLASAVGKAMVAAGEGGAI 153

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA+ GIG+A A +LA  G  + +     N         +            +    
Sbjct: 31  ALVTGASRGIGRAIALELAAAGAKVAV-----NYASSAGAADEVVAAIAAAGGEAFAVKA 85
Query: 126 DVVSAGNIKAIEMAIDGLE----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV     ++A+  A+  +E    + VL+NN GIT    +   + D+  W  ++ +NL G 
Sbjct: 86  DVSQESEVEALFAAV--IERWGRLDVLVNNAGITRDTLLLRMKRDD--WQSVLDLNLGGV 141
Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
              ++A    M++++ G I+NI S
Sbjct: 142 FLCSRAAAKIMLKQRSGRIINIAS 165

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 59  LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINI 118
           L+  G  A++TGA  G+G+ +A   A+ G  +++           +++  A+    +I  
Sbjct: 15  LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK 74
Query: 119 VEYDFSCDVVSA-GNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRV 176
              +   D  S     K IE AI     V +L+NN GI   +++   +  E++W  +  V
Sbjct: 75  AGGEAVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLV--KTSEQDWNLVNDV 132
Query: 177 NLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
           +L+G+ + T+A    M ++  G I+   S + I
Sbjct: 133 HLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGI 165

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAE 110
           L+TGA+DGIG+  A   A++G  +IL+ RN  KL ++++ I  E
Sbjct: 37  LVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEE 80

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEY 121
           G  A++TG+T GIG   A  LA  G +++L    +  ++EK+   + A++       V Y
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK----VLY 59
Query: 122 DFSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
           D   D+     ++  ++ A+  +  + +L+NN GI +       +   ++W  I+ +NL 
Sbjct: 60  D-GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLS 116
Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
                T A L  M ++  G I+NI S   +V
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLV 147

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEY 121
           G  A++TG+T GIG   A  LA  G +++L    +  ++EK+   + A++       V Y
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK----VLY 59
Query: 122 DFSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
           D   D+     ++  ++ A+  +  + +L+NN GI +       +   ++W  I+ +NL 
Sbjct: 60  D-GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLS 116
Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
                T A L  M ++  G I+NI S   +V
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLV 147

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 56  PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQ 115
           P ++   G  ALITGA  G G+  A + A+ G  +++V R+    E+++ EI        
Sbjct: 2   PGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDA 56
Query: 116 INIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVR 175
              V  D S +      ++A        +V +L+NN GI + K      V+ +E+  IV 
Sbjct: 57  ALAVAADISKEADVDAAVEAALSKFG--KVDILVNNAGIGH-KPQNAELVEPEEFDRIVG 113
Query: 176 VNLEG 180
           VN+ G
Sbjct: 114 VNVRG 118

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEY 121
           G  A++TG+T GIG   A  LA  G +++L    +  ++EK+   + A++       V Y
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK----VLY 59
Query: 122 DFSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
           D   D+     ++  ++ A+  +  + +L+NN GI +       +   ++W  I+ +NL 
Sbjct: 60  D-GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLS 116
Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
                T A L  M ++  G I+NI S   +V
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLV 147

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G+ AL+TG + GIG A   +LA  G  +   SRN  +L++     + +  N + ++    
Sbjct: 21  GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSV---- 76
Query: 123 FSCDVVSAGN----IKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
             CD++S       ++ +    DG ++ +L+NN G+   K     +  EK++  I+  N 
Sbjct: 77  --CDLLSRTERDKLMQTVAHVFDG-KLNILVNNAGVVIHKEA--KDFTEKDYNIIMGTNF 131
Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGS 205
           E    +++     +   + G ++ + S
Sbjct: 132 EAAYHLSQIAYPLLKASQNGNVIFLSS 158

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 25/147 (17%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLI-----LVSRNHNKLEKISNEIQAENPNTQINIVEY 121
           LITGA+ G G+  A  LA  G  +      +V RN + +E I+    A + +  +  +E 
Sbjct: 9   LITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNVEAIAG--FARDNDVDLRTLEL 66
Query: 122 DFSCDVVSAGNIKAIEMAIDGL-----EVGVLINNVG--ITYPKAMFFHEVDEKEWMDIV 174
           D    V       +++ AID +      + VLI+N G  +  P   F  E    ++ ++ 
Sbjct: 67  DVQSQV-------SVDRAIDQIIGEDGRIDVLIHNAGHXVFGPAEAFTPE----QFAELY 115
Query: 175 RVNLEGTTRVTKAVLTGMMRRKKGAIV 201
            +N+  T RV +A L    R+K G ++
Sbjct: 116 DINVLSTQRVNRAALPHXRRQKHGLLI 142

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           ++TG   GIG+A A   A++G  +++   N +   +++NEI ++          +    D
Sbjct: 31  IVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSK---------AFGVRVD 81
Query: 127 VVSAGNIKAIEMAIDGL-----EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           V SA   K  E  ++        V VL+NN G      +    + E+ W  I  VN++G 
Sbjct: 82  VSSA---KDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVV--TIPEETWDRIXSVNVKGI 136
Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
              +K V+    R   G+I+N  S
Sbjct: 137 FLCSKYVIPVXRRNGGGSIINTTS 160

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 64  SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK----ISNEIQAENPNTQINIV 119
           + AL+TGA  GIG+A + +LA  G  +     +    ++    +      E P    +  
Sbjct: 8   ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAA 67
Query: 120 EYDFSCDVVSAGNIKAIEMAIDGL---EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRV 176
              F  DV  A   + +   +         V+++  GIT  +  F   + E +W  ++ V
Sbjct: 68  ---FQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDE--FLLHMSEDDWDKVIAV 122
Query: 177 NLEGTTRVTKAVLTGMMRRK-KGAIVNIGS 205
           NL+GT  VT+A    ++    +G+I+NI S
Sbjct: 123 NLKGTFLVTQAAAQALVSNGCRGSIINISS 152

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFS 124
           A+ITG+T GIG A A  LA+ G N++L      +++  +++E+   +  T ++       
Sbjct: 28  AVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLH-----HP 82
Query: 125 CDVVSAGNIKAIEMAIDGLEVG--VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            D      I      +     G  +L+NN G+ + + +    V+  +W  I+ VNL  + 
Sbjct: 83  ADXTKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVE--QWDRIIAVNLSSSF 140
Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              +  +    ++  G I+NI S   +V
Sbjct: 141 HTIRGAIPPXKKKGWGRIINIASAHGLV 168

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 24/158 (15%)
Query: 53  LRQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENP 112
           ++ P +L+  G  AL+TGA  G+G+A A  LA  G  ++  +R                P
Sbjct: 1   MKNPFSLE--GRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRA--------------P 44
Query: 113 NTQINIVEYD---FSCDVVSAGNIKAIEMAIDGLEVGVLINNVG-ITYPKAMFFHEVDEK 168
           +  ++I+  D    S  ++   +  A + +       +L+NN G I    ++ F E+D  
Sbjct: 45  DETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNAGIIRRADSVEFSELD-- 102
Query: 169 EWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGS 205
            W +++ VNL+     T+A    ++ + + G +VNI S
Sbjct: 103 -WDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIAS 139

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 8/148 (5%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA+ G G A A +    G  +  +  +   LE+ +        +  + +       
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRV-----RA 59
Query: 126 DVVSAGNI-KAIEMAIDGL-EVGVLINNVGIT-YPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           DV   G++  AI   ++    + VL+NN GIT   +A   H    +++  ++ VN+ G  
Sbjct: 60  DVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIF 119
Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              +AVL  M+ +  G IVNI S A++V
Sbjct: 120 LGCRAVLPHMLLQGAGVIVNIASVASLV 147

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEY 121
           G  AL+TGA+ GIG+A A +LA  G L  I       + E+   EIQ+   +       +
Sbjct: 7   GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSA------F 60
Query: 122 DFSCDVVSAGNIKAIEMAID--------GLEVGVLINNVGITYPKAMFFHEVDEKEWMDI 173
               ++ S   ++A+  ++D          +  +LINN GI  P A F  E  E+ +   
Sbjct: 61  SIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG-PGA-FIEETTEQFFDRX 118
Query: 174 VRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA 207
           V VN +    + +  L+ +  R    I+NI S A
Sbjct: 119 VSVNAKAPFFIIQQALSRL--RDNSRIINISSAA 150

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 58/149 (38%), Gaps = 24/149 (16%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNK--LEKISN---EIQAENPNTQI 116
           G   L+TG   GIG+A A   A+ G  + L   R   K   E I     ++  E+   ++
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERV 65
Query: 117 NIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRV 176
             VE                E A     V VL+NN  I  P +     V   EW  ++ V
Sbjct: 66  RFVE----------------EAAYALGRVDVLVNNAAIAAPGSAL--TVRLPEWRRVLEV 107
Query: 177 NLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
           NL     ++      M +   GAIVN+ S
Sbjct: 108 NLTAPMHLSALAAREMRKVGGGAIVNVAS 136

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI 107
           G  A++TGA+ GIG+A A   A+ G  +++ +RN N L ++++EI
Sbjct: 8   GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEI 52

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           L+TG   GIG A A +LA  G  + +  R     + +           ++++ + D    
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF--------GVEVDVTDSD---- 66
Query: 127 VVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
                   A++ A   +E     V VL++N G++     F   + E+++  ++  NL G 
Sbjct: 67  --------AVDRAFTAVEEHQGPVEVLVSNAGLSADA--FLMRMTEEKFEKVINANLTGA 116
Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
            RV +     M R K G ++ IGS
Sbjct: 117 FRVAQRASRSMQRNKFGRMIFIGS 140

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           ++TGA  GIG+A A + A +   ++ V    ++L +I  E++                 D
Sbjct: 11  IVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEV------LGVKAD 64
Query: 127 VVSAGNIKAIEMAIDGLE----VGVLINNVGI---TYPKAMFFHEVDEKEWMDIVRVNLE 179
           V    +++  E      E    + VL NN GI     P A    EV ++ W  ++ VNL 
Sbjct: 65  VSKKKDVE--EFVRRTFETYSRIDVLCNNAGIMDGVTPVA----EVSDELWERVLAVNLY 118
Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
                ++AV+  M+++ KG IVN  S A I
Sbjct: 119 SAFYSSRAVIPIMLKQGKGVIVNTASIAGI 148

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A +TG++ GIG A A   AQ G ++ +   +H   EK      AE+      +    + C
Sbjct: 37  ASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEK------AEHLQKTYGVHSKAYKC 90
Query: 126 DVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           ++    + K++E  I   E     + V + N G+T+ +       +   W  I+ V+L G
Sbjct: 91  NI---SDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNG 147
Query: 181 TTRVTKAVLTGMMRRKKGAIV 201
               +  +     +  KG+++
Sbjct: 148 VYYCSHNIGKIFKKNGKGSLI 168

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 17/154 (11%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TG + GIG+  A  L + G  + + +R+       +  + A      I      
Sbjct: 29  GRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAI------ 82
Query: 123 FSCDVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
              D+ S    + +  A+  L   + +L+NN G ++  A+  + V    W  ++++N+  
Sbjct: 83  -PADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPV--SGWEKVMQLNVTS 139
Query: 181 TTRVTKAVLTGMMRRKKGA-----IVNIGSGAAI 209
                + +L  ++RR   A     ++NIGS A I
Sbjct: 140 VFSCIQQLLP-LLRRSASAENPARVINIGSVAGI 172

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 14/126 (11%)
Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G   ++TGA+ GIG+  A QL + G  + +  R+ + L  ++ E Q+      + +V   
Sbjct: 5   GQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQC-VPVV--- 60
Query: 123 FSCDVVSAGNIKAIEMAIDGLEVG---VLINNV-----GITYPKAMFFHEVDEKEWMDIV 174
             CD      ++++   +D  + G   VL+NN       I   +   F E     W DI 
Sbjct: 61  --CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDIN 118
Query: 175 RVNLEG 180
            V L G
Sbjct: 119 NVGLRG 124

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	210
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	1e-34
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	2e-34
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-34
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-33
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	3e-33
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	6e-33
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	1e-32
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	8e-32
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-31
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-31
1xq1_A	266	Putative tropinone reducatse; structural genomics,	4e-31
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	4e-31
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	5e-31
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	7e-31
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	9e-31
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-30
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	1e-30
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-30
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	4e-30
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	4e-30
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	4e-30
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	5e-30
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	7e-30
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	8e-30
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-29
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-29
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-29
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-29
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-29
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-29
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	3e-29
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	3e-29
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	6e-29
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	7e-29
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	8e-29
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	8e-29
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	9e-29
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	9e-29
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	9e-29
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	9e-29
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-28
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	1e-28
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-28
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-28
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	3e-28
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	5e-28
3cxt_A	291	Dehydrogenase with different specificities; rossma	7e-28
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	7e-28
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	7e-28
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	9e-28
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	1e-27
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-27
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-27
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-27
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-27
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-27
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-27
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	2e-27
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	2e-27
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	4e-27
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	5e-27
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	5e-27
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	6e-27
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	6e-27
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	6e-27
3rih_A	293	Short chain dehydrogenase or reductase; structural	6e-27
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	6e-27
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	7e-27
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	7e-27
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-27
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-26
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-26
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-26
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	2e-26
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-26
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-26
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-26
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	2e-26
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-26
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-26
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	3e-26
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	3e-26
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	3e-26
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-26
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	4e-26
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	4e-26
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	5e-26
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	5e-26
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	7e-26
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	8e-26
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	8e-26
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	8e-26
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-25
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-25
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-25
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-25
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-25
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-25
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	3e-25
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	5e-25
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	6e-25
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	6e-25
1xhl_A	297	Short-chain dehydrogenase/reductase family member	7e-25
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	8e-25
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-24
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-24
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-24
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	3e-24
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	3e-24
1xkq_A	280	Short-chain reductase family member (5D234); parra	3e-24
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	4e-24
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	4e-24
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	5e-24
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	6e-24
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	7e-24
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	7e-24
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	7e-24
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	9e-24
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-23
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-23
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-23
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	2e-23
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	3e-23
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	3e-23
1spx_A	278	Short-chain reductase family member (5L265); paral	3e-23
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	4e-23
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	4e-23
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	4e-23
4e4y_A	244	Short chain dehydrogenase family protein; structur	5e-23
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-22
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	1e-22
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-22
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	3e-22
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	3e-22
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-22
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	1e-21
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	3e-21
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-21
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	5e-21
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	6e-21
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-20
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-20
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-20
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-20
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	2e-20
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-20
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	4e-20
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	5e-20
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	6e-20
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-19
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-19
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	3e-19
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	5e-19
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	6e-19
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	6e-19
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	8e-19
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	9e-19
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	9e-19
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-18
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	1e-18
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-18
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-16
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-18
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	2e-18
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-18
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-18
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-18
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	4e-18
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	6e-18
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	6e-18
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	7e-18
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-17
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-17
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	4e-17
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	9e-17
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-16
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-16
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-16
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-16
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	5e-16
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-15
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-15
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-15
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	7e-15
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	3e-12
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	2e-11
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	6e-10
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	7e-10
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	2e-04
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	4e-04
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	4e-04
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	5e-04
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	9e-04

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  121 bits (307), Expect = 1e-34
 Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 13/143 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +ITGA+ G+G   A      G    L  R+ +KL  ++N +           V Y  + 
Sbjct: 4   IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNN--------VGY-RAR 54

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           D+ S   ++ +   +D      ++++ G  Y       E D ++   ++  NL     V 
Sbjct: 55  DLASHQEVEQLFEQLDS-IPSTVVHSAGSGYFGL--LQEQDPEQIQTLIENNLSSAINVL 111

Query: 186 KAVLTGMMRRKKGAIVNIGSGAA 208
           + ++     +    +V I S AA
Sbjct: 112 RELVKRYKDQ-PVNVVMIMSTAA 133

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  121 bits (306), Expect = 2e-34
 Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 16/156 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQ---HGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
            ++TGA+ G G+A A QLA+    G  +++ +R+ + L ++  E+ A+ P+ ++ +    
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLA--- 65

Query: 123 FSCDVVSAGNIKAIEMAI------DGLEVGVLINNVGITYP-KAMFFHEVDEKEWMDIVR 175
            + D+ +   ++ +  A+      +GL+  +LINN          F +  D  E  +   
Sbjct: 66  -AADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124

Query: 176 VNLEGTTRVTKAVLTGMMRRK--KGAIVNIGSGAAI 209
           +NL     +T   L            +VNI S  A+
Sbjct: 125 LNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL 160

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  121 bits (306), Expect = 3e-34
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 7/148 (4%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++T  + G+G A A +LA++G  L+L SRN  KLE  ++ I +     Q++IV   
Sbjct: 7   GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA-- 64

Query: 123 FSCDVVSAGNIKA-IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
              D+   G+I    E A D     +L+ + G   P+   F E+  ++W +  R+     
Sbjct: 65  --GDIREPGDIDRLFEKARDLGGADILVYSTGG--PRPGRFMELGVEDWDESYRLLARSA 120

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
             V +     M+ +  G +V IGS   +
Sbjct: 121 VWVGRRAAEQMVEKGWGRMVYIGSVTLL 148

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  120 bits (303), Expect = 1e-33
 Identities = 43/145 (29%), Positives = 78/145 (53%), Gaps = 8/145 (5%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TG+T GIGKA A  L   G N+++  R    + +   EI+A+ P+  +  V      
Sbjct: 13  ALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV----VA 68

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           D+ +    + +      ++  +LINN+GI  P    + ++ +++W  +  VN+    R+T
Sbjct: 69  DLGTEQGCQDVIEKYPKVD--ILINNLGIFEPVE--YFDIPDEDWFKLFEVNIMSGVRLT 124

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAIV 210
           ++ L  M+ RK+G ++ I S AAI+
Sbjct: 125 RSYLKKMIERKEGRVIFIASEAAIM 149

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  118 bits (299), Expect = 3e-33
 Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 9/147 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITG++ GIG A A   A+ G +++LV+R  ++L + +  ++ +     + +       
Sbjct: 10  AVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA-----V 64

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV +   + A +E          +L+NN G    +     E  +++W     + +    R
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNET--IMEAADEKWQFYWELLVMAAVR 122

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           + + ++ GM  R  GAI++  S  A+ 
Sbjct: 123 LARGLVPGMRARGGGAIIHNASICAVQ 149

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  117 bits (296), Expect = 6e-33
 Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 8/147 (5%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITGA+ GIG   A  LA  G  ++L++R+   LEK+ +EI   N + Q  IV      
Sbjct: 10  AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV---LPL 66

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+         I+        V +L+N   +    ++         +  I+ +N+     
Sbjct: 67  DITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSL---SEPVDNFRKIMEINVIAQYG 123

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           + K V   M  +K G I N+ S AA  
Sbjct: 124 ILKTVTEIMKVQKNGYIFNVASRAAKY 150

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  117 bits (295), Expect = 1e-32
 Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 8/147 (5%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TG + GIG A    L + G  +   +R+  +L    + ++   P  ++        C
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV----C 66

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV+ A  ++A  E     L    +L+NN G        F E  ++ W + +++       
Sbjct: 67  DVLDALQVRAFAEACERTLGCASILVNNAGQGRVST--FAETTDEAWSEELQLKFFSVIH 124

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             +A L  +  R   AIV + S  A  
Sbjct: 125 PVRAFLPQLESRADAAIVCVNSLLASQ 151

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  115 bits (291), Expect = 8e-32
 Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 16/154 (10%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGL---NLILVSRNHNKLEKISNEIQAENPNTQINIV 119
               LITGA+ GIGKA A +  +       LIL +R   KLE++   I  E PN ++++ 
Sbjct: 33  KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVA 92

Query: 120 EYDFSCDVVSAGNIKAIEMAIDGL-----EVGVLINNVGITYPKAMFFHEVDEKEWMDIV 174
           + D +         + I+  I+ L     ++ +L+NN G          ++  ++  D+ 
Sbjct: 93  QLDIT-------QAEKIKPFIENLPQEFKDIDILVNNAGKALGSD-RVGQIATEDIQDVF 144

Query: 175 RVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
             N+     +T+AVL     +  G IVN+GS A 
Sbjct: 145 DTNVTALINITQAVLPIFQAKNSGDIVNLGSIAG 178

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  114 bits (288), Expect = 2e-31
 Identities = 32/148 (21%), Positives = 63/148 (42%), Gaps = 11/148 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TG + GIG A   +LA  G  +   SRN  +L++     + +  N +         C
Sbjct: 24  ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEG------SVC 77

Query: 126 DVVSAGNIKA-IEMAIDGLE--VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           D++S       ++      +  + +L+NN G+   K     +  EK++  I+  N E   
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEA--KDFTEKDYNIIMGTNFEAAY 135

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            +++     +   + G ++ + S A   
Sbjct: 136 HLSQIAYPLLKASQNGNVIFLSSIAGFS 163

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  113 bits (286), Expect = 2e-31
 Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 10/149 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TGA  GIG A A   A HG +++L+ R    L ++S++I++     Q  I+  +   
Sbjct: 17  ILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALN--L 73

Query: 126 DVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           +  +A   +          E G    L++N  I  P+     ++ ++++M ++ VN+  T
Sbjct: 74  ENATAQQYRELAARVEH--EFGRLDGLLHNASIIGPRTP-LEQLPDEDFMQVMHVNVNAT 130

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             +T+A+L  + R +  +I    S     
Sbjct: 131 FMLTRALLPLLKRSEDASIAFTSSSVGRK 159

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  113 bits (286), Expect = 4e-31
 Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 11/151 (7%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
               L+TG T GIG A   + A  G  +   +RN  +L +  ++ Q +            
Sbjct: 14  AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTG------ 67

Query: 123 FSCDVVSAGNIKA-IEMAID--GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
             CD       +  ++      G ++ +LINN+G    K     +   +++   +  NLE
Sbjct: 68  SVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPT--LDYTAEDFSFHISTNLE 125

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
               +++     +     G I+ + S A +V
Sbjct: 126 SAYHLSQLAHPLLKASGCGNIIFMSSIAGVV 156

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  113 bits (284), Expect = 4e-31
 Identities = 31/145 (21%), Positives = 50/145 (34%), Gaps = 9/145 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
             + GA D IG   A + A  G  +    RN  KL  +  EI+A              S 
Sbjct: 10  VAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVA------RSL 63

Query: 126 DVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
           D  +   + A   A D    + V I NVG          E  ++ +  +  +        
Sbjct: 64  DARNEDEVTAFLNAADAHAPLEVTIFNVGANVNFP--ILETTDRVFRKVWEMACWAGFVS 121

Query: 185 TKAVLTGMMRRKKGAIVNIGSGAAI 209
            +     M+   +G I   G+ A++
Sbjct: 122 GRESARLMLAHGQGKIFFTGATASL 146

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  112 bits (284), Expect = 5e-31
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 9/147 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TG    IG A    LA+ G  +I+   +     K   +++ E  +            
Sbjct: 16  AIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSS------VVM 69

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV +  +++  +    +    V +L+   GI   +     ++ + +W+  V +NL G  R
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKA-EDMTDGQWLKQVDINLNGMFR 128

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             +AV   M+ +K+G IV IGS + ++
Sbjct: 129 SCQAVGRIMLEQKQGVIVAIGSMSGLI 155

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  112 bits (283), Expect = 7e-31
 Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TGA+DGIG+  A   A++G  +IL+ RN  KL ++++ I  E    Q      D   
Sbjct: 15  ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-GRQPQWFILD--L 71

Query: 126 DVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
              ++ N +   +             +++N G+         E + + W D+++VN+  T
Sbjct: 72  LTCTSENCQQLAQRIAV--NYPRLDGVLHNAGLLGDVCP-MSEQNPQVWQDVMQVNVNAT 128

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             +T+A+L  +++   G++V   S     
Sbjct: 129 FMLTQALLPLLLKSDAGSLVFTSSSVGRQ 157

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  112 bits (283), Expect = 9e-31
 Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 10/148 (6%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
               LITGA+ GIG+  A +L   G  ++L +R   ++E I+ EI+              
Sbjct: 4   DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALA------ 57

Query: 123 FSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
              DV    ++ A  + A+D    + VL+NN G+     +    V   EW  ++ VN++G
Sbjct: 58  QVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPL--AAVKVDEWERMIDVNIKG 115

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
                 AVL  M  ++ G I+NIGS  A
Sbjct: 116 VLWGIGAVLPIMEAQRSGQIINIGSIGA 143

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  112 bits (282), Expect = 1e-30
 Identities = 30/148 (20%), Positives = 62/148 (41%), Gaps = 11/148 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TG + GIG     +LA  G ++   SRN  +L     + +++    +         C
Sbjct: 12  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEA------SVC 65

Query: 126 DVVSAGNIKA-IEMAIDGLE--VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           D+ S    +  +    +     + +L+NN GI   K     +   +++  I+ +N E   
Sbjct: 66  DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEA--KDYTVEDYSLIMSINFEAAY 123

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            ++      +   ++G +V I S +  +
Sbjct: 124 HLSVLAHPFLKASERGNVVFISSVSGAL 151

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  111 bits (281), Expect = 1e-30
 Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 18/148 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TGAT G G+    +  Q G  +I   R   +L+++ +E+             Y    
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDN---------LYIAQL 53

Query: 126 DVVSAGNIKAIEMAIDGL-----EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           DV    N  AIE  +  L      + +L+NN G+        H+   ++W  ++  N +G
Sbjct: 54  DVR---NRAAIEEMLASLPAEWCNIDILVNNAGLALGME-PAHKASVEDWETMIDTNNKG 109

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
              +T+AVL GM+ R  G I+NIGS A 
Sbjct: 110 LVYMTRAVLPGMVERNHGHIINIGSTAG 137

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  111 bits (280), Expect = 1e-30
 Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITGA+ GIG+A A  LA+ G  L L +R+ ++LEKI++E+  E               
Sbjct: 5   AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHH-----L 59

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV  A +++   +  ++   +V V++ N G+ Y K +   E+ E+E+ +++ VNL G  R
Sbjct: 60  DVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRL--EELSEEEFHEMIEVNLLGVWR 117

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             KA L  + R    A+V     +A +
Sbjct: 118 TLKAFLDSLKRTGGLALVTTSDVSARL 144

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  111 bits (279), Expect = 4e-30
 Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 17/152 (11%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
            S   ITGAT G G+A A + A+ G +L+L  R   +L+ ++ E+ A+   T++  +  D
Sbjct: 21  SSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLD 77

Query: 123 FSCDVVSAGNIKAIEMAIDGL-----EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVN 177
                    +  A+  A+D L      +  LINN G+           D  +W  +V  N
Sbjct: 78  VR-------DRAAMSAAVDNLPEEFATLRGLINNAGLALGTDP-AQSCDLDDWDTMVDTN 129

Query: 178 LEGTTRVTKAVLTGMMRRKKGA-IVNIGSGAA 208
           ++G    T+ +L  ++    GA IVN+GS A 
Sbjct: 130 IKGLLYSTRLLLPRLIAHGAGASIVNLGSVAG 161

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  111 bits (279), Expect = 4e-30
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 12/149 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A +TG + GIG A A  LA  G+ +   +R+   +    + ++A   +          SC
Sbjct: 27  AFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDG------SSC 80

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV S   + A +  A++    +G+L+N+ G          ++D+  W D++  NL G  R
Sbjct: 81  DVTSTDEVHAAVAAAVERFGPIGILVNSAGRN--GGGETADLDDALWADVLDTNLTGVFR 138

Query: 184 VTKAVL--TGMMRRKKGAIVNIGSGAAIV 210
           VT+ VL   GM     G IVNI S     
Sbjct: 139 VTREVLRAGGMREAGWGRIVNIASTGGKQ 167

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  111 bits (280), Expect = 4e-30
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 5/140 (3%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TG   GIGKA   +L + G N+++ SR   +L+  ++E+QA  P T+   V     C
Sbjct: 21  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP-IQC 79

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           ++ +   +   ++  +D   ++  L+NN G  +        +  K W  ++  NL GT  
Sbjct: 80  NIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSP--AEHISSKGWHAVLETNLTGTFY 137

Query: 184 VTKAVLTGMMRRKKGAIVNI 203
           + KAV +  M+   G+IVNI
Sbjct: 138 MCKAVYSSWMKEHGGSIVNI 157

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  109 bits (276), Expect = 5e-30
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 14/145 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITGA+ GIG+A A  L   G  + L++R+  +L+ ++ E++   P             
Sbjct: 8   VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALP----------LPG 57

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV   G+    +    +   E+  L+NN G+   K    HE+  +EW  ++  NL G   
Sbjct: 58  DVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKP--VHELTLEEWRLVLDTNLTGAFL 115

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAA 208
             +  +  ++RR  G IVN+GS A 
Sbjct: 116 GIRHAVPALLRRGGGTIVNVGSLAG 140

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  110 bits (277), Expect = 7e-30
 Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 16/178 (8%)

Query: 38  LKHSMSLLKCIYITFL--RQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR 95
             H  S  + +Y      ++ K++   G   LITGA  GIG+  A++ A+    L+L   
Sbjct: 6   HHHHSSGRENLYFQGHMPKRRKSVT--GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI 63

Query: 96  NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVG---VLINNV 152
           N + LE+ + + +            + F  D  +  +I +    +   E+G   +L+NN 
Sbjct: 64  NKHGLEETAAKCKGLGAKV------HTFVVDCSNREDIYSSAKKVKA-EIGDVSILVNNA 116

Query: 153 GITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           G+ Y          + +      VN+      TKA L  M +   G IV + S A  V
Sbjct: 117 GVVYTSD--LFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV 172

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  109 bits (276), Expect = 8e-30
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA+ GIG A A +L   G  ++L +R+  KL  +  EI A     +        +C
Sbjct: 32  AVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAES------HAC 85

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+  +  I A     +       VL+NN G+        H +   EW  ++ VNL+    
Sbjct: 86  DLSHSDAIAAFATGVLAAHGRCDVLVNNAGVG-WFGGPLHTMKPAEWDALIAVNLKAPYL 144

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           + +A    M+  K+G I+NI S A   
Sbjct: 145 LLRAFAPAMIAAKRGHIINISSLAGKN 171

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  109 bits (276), Expect = 1e-29
 Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 9/147 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+T +TDGIG A A +LAQ G ++++ SR    +++    +Q E  +           C
Sbjct: 17  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTG------TVC 70

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
            V  A + +  + MA++    V +L++N  +  P      +  E+ W  I+ VN++ T  
Sbjct: 71  HVGKAEDRERLVAMAVNLHGGVDILVSNAAVN-PFFGNIIDATEEVWDKILHVNVKATVL 129

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +TKAV+  M +R  G+++ + S  A  
Sbjct: 130 MTKAVVPEMEKRGGGSVLIVSSVGAYH 156

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  110 bits (276), Expect = 1e-29
 Identities = 50/144 (34%), Positives = 70/144 (48%), Gaps = 12/144 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGAT GIG   A +L + GL + + +R    L     E++               +C
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADG------RTC 78

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV S   I+A +   ++    V VL+NN G          E+ ++ W+D+V  NL G  R
Sbjct: 79  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRP--GGGATAELADELWLDVVETNLTGVFR 136

Query: 184 VTKAVL--TGMMRRKKGAIVNIGS 205
           VTK VL   GM+ R  G IVNI S
Sbjct: 137 VTKQVLKAGGMLERGTGRIVNIAS 160

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  109 bits (275), Expect = 2e-29
 Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 16/161 (9%)

Query: 54  RQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPN 113
            +P+ L+  G   ++TGA+ GIG+  A+ LA+ G ++++ +R+   L+K+ +        
Sbjct: 21  FRPEMLQ--GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA 78

Query: 114 TQINIVEYDFSCDVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKE 169
           +   I        +      +  +  A     +G   +LI N              D   
Sbjct: 79  SAHYIA-----GTMEDMTFAEQFVAQAGK--LMGGLDMLILNHITNTSL--NLFHDDIHH 129

Query: 170 WMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
               + VN      +T A L  M+++  G+IV + S A  V
Sbjct: 130 VRKSMEVNFLSYVVLTVAAL-PMLKQSNGSIVVVSSLAGKV 169

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  109 bits (275), Expect = 2e-29
 Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 10/142 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIG+  A  LA+   ++I +SR     + + +EI++    +        ++ 
Sbjct: 47  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSG------YAG 100

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV     I   I   +     V +L+NN GIT  +   F  +   EW D++R NL     
Sbjct: 101 DVSKKEEISEVINKILTEHKNVDILVNNAGIT--RDNLFLRMKNDEWEDVLRTNLNSLFY 158

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
           +T+ +   M+  + G I+NI S
Sbjct: 159 ITQPISKRMINNRYGRIINISS 180

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  108 bits (273), Expect = 2e-29
 Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 11/147 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA  GIG+A A   A+ G ++++        E ++  I+                C
Sbjct: 15  AIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIG------LEC 68

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           +V    + +A I+ A+D   ++ VL+NN G   PK     ++   ++    ++NL    R
Sbjct: 69  NVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF---DMPMSDFEWAFKLNLFSLFR 125

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +++     M +   GAI+NI S A   
Sbjct: 126 LSQLAAPHMQKAGGGAILNISSMAGEN 152

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  109 bits (274), Expect = 2e-29
 Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 10/147 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA+ GIG A A  L Q GL ++  +R    +E+++ E ++      +        C
Sbjct: 35  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR----C 90

Query: 126 DVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+ +  +I             V + INN G+  P  +         W D+  VN+   + 
Sbjct: 91  DLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTL--LSGSTSGWKDMFNVNVLALSI 148

Query: 184 VTKAVLTGMMRRK--KGAIVNIGSGAA 208
            T+     M  R    G I+NI S + 
Sbjct: 149 CTREAYQSMKERNVDDGHIININSMSG 175

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  108 bits (272), Expect = 3e-29
 Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 13/149 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TGA   IG A A +LA+ G  + L+  N   LEK    ++ +    +       + C
Sbjct: 10  CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS------YVC 63

Query: 126 DVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV S   +   ++  +   + G    L NN G     A    +    ++  ++ +N+ G 
Sbjct: 64  DVTSEEAVIGTVDSVVR--DFGKIDFLFNNAGYQGAFAPV-QDYPSDDFARVLTINVTGA 120

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             V KAV   M+ +  G IVN  S A + 
Sbjct: 121 FHVLKAVSRQMITQNYGRIVNTASMAGVK 149

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  107 bits (271), Expect = 3e-29
 Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 10/142 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA+ GIG   AH LA  G  ++  + +    EK  N ++ +    +          
Sbjct: 8   ALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARG------LVL 61

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           ++    +I+            + +L+NN GIT  +      + E EW  ++  NL    R
Sbjct: 62  NISDIESIQNFFAEIKAENLAIDILVNNAGIT--RDNLMMRMSEDEWQSVINTNLSSIFR 119

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
           ++K  + GMM+++ G I++IGS
Sbjct: 120 MSKECVRGMMKKRWGRIISIGS 141

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  107 bits (270), Expect = 6e-29
 Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 15/149 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITGA  GIGK  A   A  G ++++   N +    + +EIQ                C
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFA------CRC 67

Query: 126 DVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           D+ S   + A  + AI   ++G   +L+NN G   PK     ++   ++     +N+   
Sbjct: 68  DITSEQELSALADFAIS--KLGKVDILVNNAGGGGPKPF---DMPMADFRRAYELNVFSF 122

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             +++ V   M +   G I+ I S AA  
Sbjct: 123 FHLSQLVAPEMEKNGGGVILTITSMAAEN 151

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  107 bits (269), Expect = 7e-29
 Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 15/145 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++T A  GIG+A A   A+ G  +I    N +KL+++      +               
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQ-----------TRVL 57

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           DV     I      ++ L+V  L N  G  +   +   + +EK+W   + +N+     + 
Sbjct: 58  DVTKKKQIDQFANEVERLDV--LFNVAGFVHHGTV--LDCEEKDWDFSMNLNVRSMYLMI 113

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAIV 210
           KA L  M+ +K G I+N+ S A+ V
Sbjct: 114 KAFLPKMLAQKSGNIINMSSVASSV 138

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  106 bits (268), Expect = 8e-29
 Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 17/147 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIG+     L   G  ++ V+R ++ L  ++ E     P             
Sbjct: 10  ALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEP----------VCV 59

Query: 126 DVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
           D+   G+  A E A+ G+  V +L+NN  +   +   F EV ++ +     VNL    +V
Sbjct: 60  DL---GDWDATEKALGGIGPVDLLVNNAALVIMQP--FLEVTKEAFDRSFSVNLRSVFQV 114

Query: 185 TKAVLTGMMRRKK-GAIVNIGSGAAIV 210
           ++ V   M+ R   G+IVN+ S  A V
Sbjct: 115 SQMVARDMINRGVPGSIVNVSSMVAHV 141

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  107 bits (270), Expect = 8e-29
 Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 10/142 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA+ GIG+A A +LA+ G  +I  +      E I    +      +          
Sbjct: 31  AIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRG------AVL 84

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           +V  A  + A +E  +     + VL+NN GIT  +      + + EW  ++  NL+   R
Sbjct: 85  NVNDATAVDALVESTLKEFGALNVLVNNAGIT--QDQLAMRMKDDEWDAVIDTNLKAVFR 142

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
           +++AVL  MM+ + G IVNI S
Sbjct: 143 LSRAVLRPMMKARGGRIVNITS 164

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  106 bits (268), Expect = 9e-29
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 11/148 (7%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  ALITGA+ GIG+A A  LA  G  + + +R   KL  + +E+ A      +      
Sbjct: 7   GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHV------ 60

Query: 123 FSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
              DV     + A +   ++ L  + +L+NN GI     +   + D  +W  ++  NL G
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPV--EDADTTDWTRMIDTNLLG 118

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
              +T+A L   + R KG +V + S A 
Sbjct: 119 LMYMTRAALPH-LLRSKGTVVQMSSIAG 145

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  107 bits (270), Expect = 9e-29
 Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 10/149 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TG   GIGK  A  L   G ++++V RN +KL     E++A   N            
Sbjct: 14  YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRY---EPT 70

Query: 126 DVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           D+ +       ++        G    +++  G +        +VD + W   V +N+ GT
Sbjct: 71  DITNEDETARAVDAVTA--WHGRLHGVVHCAGGSENIGPI-TQVDSEAWRRTVDLNVNGT 127

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             V K     M+R   G+ V I S AA  
Sbjct: 128 MYVLKHAAREMVRGGGGSFVGISSIAASN 156

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  107 bits (270), Expect = 9e-29
 Identities = 29/144 (20%), Positives = 61/144 (42%), Gaps = 12/144 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A +TG++ GIG A A   AQ G ++ +   +H   EK  +  +    +++       + C
Sbjct: 37  ASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKA------YKC 90

Query: 126 DVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           ++    +++  I       + G   V + N G+T+ +       +   W  I+ V+L G 
Sbjct: 91  NISDPKSVEETISQQEK--DFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGV 148

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
              +  +     +  KG+++   S
Sbjct: 149 YYCSHNIGKIFKKNGKGSLIITSS 172

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  106 bits (268), Expect = 9e-29
 Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 17/144 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A +TGA  GIG       A  G  LIL+ R    L++ + E+ A                
Sbjct: 14  AAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAAR--------IVA 65

Query: 126 DVVSAGNIKAIEMAIDGLE----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV    + +A+  A    E    V +L+N+ GI         E D+  W  ++ VN++G 
Sbjct: 66  DV---TDAEAMTAAAAEAEAVAPVSILVNSAGIARLHDA--LETDDATWRQVMAVNVDGM 120

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGS 205
              ++A    M+ R  GAIVN+GS
Sbjct: 121 FWASRAFGRAMVARGAGAIVNLGS 144

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  107 bits (269), Expect = 1e-28
 Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 7/145 (4%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVE-YDFS 124
           AL+TGA  GIG+A + +LA  G  +     +    ++    +                F 
Sbjct: 10  ALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQ 69

Query: 125 CDVVSAGNIKA-IEMAID--GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
            DV  A   +  +E           V+++  GIT  +  F   + E +W  ++ VNL+GT
Sbjct: 70  ADVSEARAARCLLEQVQACFSRPPSVVVSCAGIT--QDEFLLHMSEDDWDKVIAVNLKGT 127

Query: 182 TRVTKAVLTGMMR-RKKGAIVNIGS 205
             VT+A    ++    +G+I+NI S
Sbjct: 128 FLVTQAAAQALVSNGCRGSIINISS 152

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  106 bits (267), Expect = 1e-28
 Identities = 31/143 (21%), Positives = 59/143 (41%), Gaps = 21/143 (14%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
               L+  A+ GIG+A A  L+Q G  + + +RN   L++  +                 
Sbjct: 19  DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV------------- 65

Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
             CD+     +  +   +  +++  L+ N G   PKA FF E+  +++ + +        
Sbjct: 66  --CDLRKD--LDLLFEKVKEVDI--LVLNAGG--PKAGFFDELTNEDFKEAIDSLFLNMI 117

Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
           ++ +  L  M  +  G IV I S
Sbjct: 118 KIVRNYLPAMKEKGWGRIVAITS 140

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  105 bits (265), Expect = 2e-28
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 17/154 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLN-------LILVSRNHNKLEKISNEIQAENPNTQINI 118
            LITGA  GIG+A A + A+   +       L+L SR    LEKIS E +AE   T    
Sbjct: 5   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT-- 62

Query: 119 VEYDFSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRV 176
                + D+    +++      ++    +  L+NN G+    A+   ++ E+++   +  
Sbjct: 63  ----ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGAL--SDLTEEDFDYTMNT 116

Query: 177 NLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           NL+GT  +T+A+   M R+  G I  I S AA  
Sbjct: 117 NLKGTFFLTQALFALMERQHSGHIFFITSVAATK 150

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  106 bits (266), Expect = 2e-28
 Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 11/149 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITG   G+G+A A +LA  G  L LV  +   LE     +    P+ ++         
Sbjct: 16  VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV----A 71

Query: 126 DVVSAGNIKA-IEMAID---GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV     ++A +    +    ++     NN GI   +          E+  +V +NL G 
Sbjct: 72  DVSDEAQVEAYVTATTERFGRIDG--FFNNAGIEGKQNPT-ESFTAAEFDKVVSINLRGV 128

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
               + VL  M  +  G +VN  S   I 
Sbjct: 129 FLGLEKVLKIMREQGSGMVVNTASVGGIR 157

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  105 bits (265), Expect = 3e-28
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TG+  GIG+A+A  LA+ G  +++   N    E ++ +I A+             + 
Sbjct: 12  GIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAIS------VAV 65

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYP-KAMFFHEVDEKEWMDIVRVNLEGTT 182
           DV    + KA  +  +     +  L+NN  I    K  F   +D + +   + VNL+G  
Sbjct: 66  DVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGAL 125

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             T+AV   M +R  GAIVN  S AA +
Sbjct: 126 WCTRAVYKKMTKRGGGAIVNQSSTAAWL 153

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  105 bits (264), Expect = 5e-28
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 10/148 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           ALITGAT GIG   A   A  G  L+L  R+ ++L+     +  +       +       
Sbjct: 23  ALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA-----I 77

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+            A +    + VL+NN GI++P+     + D + +   + VNL     
Sbjct: 78  DLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQP--VVDTDPQLFDATIAVNLRAPAL 135

Query: 184 VTKAVLTGMMRRKK-GAIVNIGSGAAIV 210
           +  AV   M+   + GAI+ + S AA+ 
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALA 163

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  104 bits (262), Expect = 7e-28
 Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 15/142 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITGA  GIG+A     A+ G  L+        L + +  + A                
Sbjct: 8   VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP-----------VVM 56

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV    +++     A+  L  +  +++  GIT  +  F  ++  ++W  ++RVNL G+  
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGIT--RDNFHWKMPLEDWELVLRVNLTGSFL 114

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
           V KA    M  +  G+IV   S
Sbjct: 115 VAKAASEAMREKNPGSIVLTAS 136

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  104 bits (262), Expect = 7e-28
 Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TGA  GIG+     L   G  ++ VSR    L+ +  E     P             
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEP----------VCV 59

Query: 126 DVVSAGNIKAIEMAIDGLE-VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
           D+   G+ +A E A+  +  V +L+NN  +   +   F EV ++ +     VNL    +V
Sbjct: 60  DL---GDWEATERALGSVGPVDLLVNNAAVALLQP--FLEVTKEAFDRSFEVNLRAVIQV 114

Query: 185 TKAVLTGMMRRKK-GAIVNIGSGAAIV 210
           ++ V  G++ R   GAIVN+ S  +  
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQR 141

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  105 bits (263), Expect = 9e-28
 Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 9/147 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A ITG   GIG   A    +HG + ++ SR+  ++   + ++        + +     S 
Sbjct: 30  AFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPL-----SM 84

Query: 126 DVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV +   +  A++ A+     + +LIN     +        +    +  ++ ++  GT  
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCP--AGALSFNAFKTVMDIDTSGTFN 142

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           V++ +     R   G IVNI +     
Sbjct: 143 VSRVLYEKFFRDHGGVIVNITATLGNR 169

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  103 bits (260), Expect = 1e-27
 Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 16/146 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGAT G+G      L++    +  + RN   L  ++     E               
Sbjct: 8   AVVTGATGGMGIEIVKDLSRDH-IVYALGRNPEHLAALAEIEGVEP-----------IES 55

Query: 126 DVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
           D+V     +     +  L  V  L++   +     +        EW   + +N+     +
Sbjct: 56  DIVKEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTI--EAGSVAEWHAHLDLNVIVPAEL 113

Query: 185 TKAVLTGMMRRKKGAIVNIGSGAAIV 210
           ++ +L   +R   G ++ I SGA   
Sbjct: 114 SRQLL-PALRAASGCVIYINSGAGNG 138

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  103 bits (260), Expect = 1e-27
 Identities = 44/143 (30%), Positives = 77/143 (53%), Gaps = 11/143 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           A++TG++ G+GKA A +L   G N++L  S     L+  + E +A   N  +        
Sbjct: 8   AIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVV------AK 61

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            DV +  +++  ++ A+D    + +L+NN GIT  +     ++ EK+W D++  NL+   
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGIT--RDTLMLKMSEKDWDDVLNTNLKSAY 119

Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
             TKAV   M+++K G I+NI S
Sbjct: 120 LCTKAVSKIMLKQKSGKIINITS 142

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  104 bits (262), Expect = 1e-27
 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 10/149 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TG   G+G+  A  L+  G ++++  R  + L+  + EI     N    +V     C
Sbjct: 36  ALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVV-----C 90

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV     + A           + +L+NN G   P      EV  ++W  IV  NL G   
Sbjct: 91  DVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVP-LEEVTFEQWNGIVAANLTGAFL 149

Query: 184 VTKAVLTGMMRR--KKGAIVNIGSGAAIV 210
            T+     M  +  + G I+N GS +A  
Sbjct: 150 CTQHAFRMMKAQTPRGGRIINNGSISAQT 178

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  104 bits (261), Expect = 2e-27
 Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 10/147 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +I+G    +G   A + A+ G +L+L +R   +LE ++ ++                  
Sbjct: 14  VVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALS------VGT 67

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+     +   ++  +     V V+INN          F     +   D + + + G  R
Sbjct: 68  DITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKP-FANTTFEHMRDAIELTVFGALR 126

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           + +      +   KGA+VN+ S     
Sbjct: 127 LIQGFTP-ALEESKGAVVNVNSMVVRH 152

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  103 bits (260), Expect = 2e-27
 Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 11/143 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           A +TG   G+G A + +L   G+ + +  S  ++ +       +    + +       ++
Sbjct: 28  AFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKA------YA 81

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            DV    + +   E  +    +V VLINN GIT  +   F ++ + +W  ++R +L+   
Sbjct: 82  VDVADFESCERCAEKVLADFGKVDVLINNAGIT--RDATFMKMTKGDWDAVMRTDLDAMF 139

Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
            VTK  + GM+ R+ G IVNIGS
Sbjct: 140 NVTKQFIAGMVERRFGRIVNIGS 162

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  104 bits (262), Expect = 2e-27
 Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 16/151 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A ITG   G+GK     L+  G   ++ SR  + L+  + +I ++  N    I      C
Sbjct: 29  AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAI-----QC 83

Query: 126 DVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           DV    +   ++  +  L        ++INN    +        +    W  I  + L G
Sbjct: 84  DV---RDPDMVQNTVSELIKVAGHPNIVINNAAGNFISP--TERLSPNAWKTITDIVLNG 138

Query: 181 TTRVTKAVLTGMMRRKK-GAIVNIGSGAAIV 210
           T  VT  +   +++ +K  A ++I +  A  
Sbjct: 139 TAFVTLEIGKQLIKAQKGAAFLSITTIYAET 169

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  103 bits (259), Expect = 2e-27
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           A +TG   GIG +   +L + G  ++     N  +  K   + +A   +           
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYA------SE 69

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            +V    + K   +     + E+ VL+NN GIT  + + F ++  ++W  ++  NL    
Sbjct: 70  GNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGIT--RDVVFRKMTREDWQAVIDTNLTSLF 127

Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
            VTK V+ GM+ R  G I+NI S
Sbjct: 128 NVTKQVIDGMVERGWGRIINISS 150

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  104 bits (261), Expect = 2e-27
 Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 10/148 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFS 124
           A+ITG+T GIG A A  LA+ G N++L      +++  +++E+   +  T ++       
Sbjct: 28  AVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHP----- 82

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            D+     I   + M  D      +L+NN G+ + +     +   ++W  I+ VNL  + 
Sbjct: 83  ADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEK--IEDFPVEQWDRIIAVNLSSSF 140

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              +  +  M ++  G I+NI S   +V
Sbjct: 141 HTIRGAIPPMKKKGWGRIINIASAHGLV 168

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  103 bits (259), Expect = 2e-27
 Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 13/149 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TGA  GIG+A A + A +   ++ V    ++L +I  E++                 
Sbjct: 10  VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLG------VKA 63

Query: 126 DVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV    +++  +    +        VL NN GI         EV ++ W  ++ VNL   
Sbjct: 64  DVSKKKDVEEFVRRTFE--TYSRIDVLCNNAGIMDGVTPV-AEVSDELWERVLAVNLYSA 120

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              ++AV+  M+++ KG IVN  S A I 
Sbjct: 121 FYSSRAVIPIMLKQGKGVIVNTASIAGIR 149

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  102 bits (257), Expect = 4e-27
 Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 11/143 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TGA+ GIG+A A  LA+ G N+++  + N  K  ++ +EI+    +           
Sbjct: 7   ALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIA------VR 60

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            DV +A ++   ++  +D   +V +L+NN G+T  K      + E+EW  ++  NL+G  
Sbjct: 61  ADVANAEDVTNMVKQTVDVFGQVDILVNNAGVT--KDNLLMRMKEEEWDTVINTNLKGVF 118

Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
             TKAV   MMR++ G IVNI S
Sbjct: 119 LCTKAVSRFMMRQRHGRIVNIAS 141

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  102 bits (256), Expect = 5e-27
 Identities = 43/143 (30%), Positives = 77/143 (53%), Gaps = 11/143 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
            ++TGA+ GIGKA A  L + G  +++  +R+    E++S +I+A             F 
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAIT------FG 57

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            DV    +++A ++ AID    + V++NN GIT  +      + + +W +++ +NL G  
Sbjct: 58  GDVSKEADVEAMMKTAIDAWGTIDVVVNNAGIT--RDTLLIRMKKSQWDEVIDLNLTGVF 115

Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
             T+A    MM+++KG I+NI S
Sbjct: 116 LCTQAATKIMMKKRKGRIINIAS 138

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  102 bits (257), Expect = 5e-27
 Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 14/148 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TG + GIG A A  L + G  + +   +    + +   ++            +    
Sbjct: 15  AIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG---------FAVEV 65

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV    ++ A ++ AID L    +L  N G++        ++ ++EW     VN  G   
Sbjct: 66  DVTKRASVDAAMQKAIDALGGFDLLCANAGVS--TMRPAVDITDEEWDFNFDVNARGVFL 123

Query: 184 VTKAVLTGMM-RRKKGAIVNIGSGAAIV 210
             +      +    KG IVN  S AA V
Sbjct: 124 ANQIACRHFLASNTKGVIVNTASLAAKV 151

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  103 bits (258), Expect = 6e-27
 Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           ALITGA+ GIGK  A   A+ G  + + +R+ + L+ +++EI                 C
Sbjct: 35  ALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALP------IRC 88

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV     ++  ++     L  + + + N GI   +AM   ++  +E+  I   N+ G   
Sbjct: 89  DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAM--LDMPLEEFQRIQDTNVTGVFL 146

Query: 184 VTKAVLTGMMRRKK-GAIVNIGS 205
             +A    M+ +   G I+   S
Sbjct: 147 TAQAAARAMVDQGLGGTIITTAS 169

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  101 bits (255), Expect = 6e-27
 Identities = 24/147 (16%), Positives = 57/147 (38%), Gaps = 14/147 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TGA  G+G+A    L + G  + ++ R + +L++    +           V      
Sbjct: 6   IIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNA--------VIG-IVA 56

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+    ++      A++      ++++  G              ++   ++  NL  T  
Sbjct: 57  DLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGP--VGVYTAEQIRRVMESNLVSTIL 114

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           V +  +  ++  + G + N+ S AA V
Sbjct: 115 VAQQTVR-LIGERGGVLANVLSSAAQV 140

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  102 bits (256), Expect = 6e-27
 Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 9/142 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TG T GIG+  A   A+ G N+ +  R+   ++    ++        I         
Sbjct: 13  VVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIG-----VQT 67

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV       A    A++    + V+  N G+          +  ++   I  VN+ GT  
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGVF--PDAPLATMTPEQLNGIFAVNVNGTFY 125

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
             +A L  ++    G +V   S
Sbjct: 126 AVQACLDALIASGSGRVVLTSS 147

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  103 bits (258), Expect = 6e-27
 Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 9/142 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TG T GIG+  A   A+ G N+ + +R+  +L  ++ E+        I +       
Sbjct: 44  VLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVR-----L 98

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV   G+        +D    + V+  N GI          +  ++  +++ VN++GT  
Sbjct: 99  DVSDPGSCADAARTVVDAFGALDVVCANAGIF--PEARLDTMTPEQLSEVLDVNVKGTVY 156

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
             +A L  +    +G ++   S
Sbjct: 157 TVQACLAPLTASGRGRVILTSS 178

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  102 bits (257), Expect = 6e-27
 Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 11/143 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TGA+ GIG+A A +LA  G  + +  + +    +++   I A               
Sbjct: 31  ALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFA------VK 84

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            DV     ++A     I+    + VL+NN GIT  +      +   +W  ++ +NL G  
Sbjct: 85  ADVSQESEVEALFAAVIERWGRLDVLVNNAGIT--RDTLLLRMKRDDWQSVLDLNLGGVF 142

Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
             ++A    M++++ G I+NI S
Sbjct: 143 LCSRAAAKIMLKQRSGRIINIAS 165

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  101 bits (255), Expect = 7e-27
 Identities = 29/149 (19%), Positives = 59/149 (39%), Gaps = 15/149 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV--SRNHNKLEKISNEIQAENPNTQINIVEYDF 123
            L+TG + GIGK+    L     + ++   +R+   L+K+  +              Y  
Sbjct: 5   ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDR--------FFY-V 55

Query: 124 SCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
             D+     +K  +  A+ G  ++  L+ N G+  P     +E+D   W  +  +N    
Sbjct: 56  VGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQ-NVNEIDVNAWKKLYDINFFSI 114

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             +    L   +++  G +V + S A  +
Sbjct: 115 VSLVGIALP-ELKKTNGNVVFVSSDACNM 142

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  101 bits (255), Expect = 7e-27
 Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 13/142 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA+ GIGKA A  LA+ G  +I  + + +  + IS+ +                + 
Sbjct: 12  ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---------KGMAL 62

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           +V +  +I+A ++   D    V +L+NN GIT  +      + E+EW DI+  NL    R
Sbjct: 63  NVTNPESIEAVLKAITDEFGGVDILVNNAGIT--RDNLLMRMKEEEWSDIMETNLTSIFR 120

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
           ++KAVL GMM++++G I+N+GS
Sbjct: 121 LSKAVLRGMMKKRQGRIINVGS 142

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  101 bits (255), Expect = 7e-27
 Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 11/143 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TGA+ GIG++ A QLA+ G N+ +  + +  K E +  EI+A+  ++          
Sbjct: 7   ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFA------IQ 60

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            +V  A  +KA I+  +     + VL+NN GIT  +      + E+EW D++  NL+G  
Sbjct: 61  ANVADADEVKAMIKEVVSQFGSLDVLVNNAGIT--RDNLLMRMKEQEWDDVIDTNLKGVF 118

Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
              +     M+R++ GAI+N+ S
Sbjct: 119 NCIQKATPQMLRQRSGAIINLSS 141

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  101 bits (254), Expect = 1e-26
 Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 11/148 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +ITG + G+GK  A + A+ G  +++  R   KLE+   EI+                 
Sbjct: 9   VIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILT------VQM 62

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV +  +I+  IE   +    + +LINN    +       ++    W  ++ + L GT  
Sbjct: 63  DVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICP--AEDLSVNGWNSVINIVLNGTFY 120

Query: 184 VTKAVLTGMMRRK-KGAIVNIGSGAAIV 210
            ++A+    + +  KG I+N+ +  A  
Sbjct: 121 CSQAIGKYWIEKGIKGNIINMVATYAWD 148

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  101 bits (254), Expect = 1e-26
 Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 17/146 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TG+  G+G A+A  LA  G  +IL       L +  + +  +  +          + 
Sbjct: 12  ALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHG------VAF 65

Query: 126 DVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           DV    +  AIE A   L+     V +LINN GI Y K M   E++ + W  ++  NL  
Sbjct: 66  DV---TDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPM--VELELENWQKVIDTNLTS 120

Query: 181 TTRVTKAVLTGMM-RRKKGAIVNIGS 205
              V+++    M+ R   G I+NIGS
Sbjct: 121 AFLVSRSAAKRMIARNSGGKIINIGS 146

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  101 bits (253), Expect = 1e-26
 Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 10/143 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           ALITGA+ GIG+A A +LA+ G  L +   +N  K E+++ E +          +     
Sbjct: 4   ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSP-----LVAVLG 58

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            +++ A    A +  A + L  +  L+NN GIT  +      + +++W  ++  NL    
Sbjct: 59  ANLLEAEAATALVHQAAEVLGGLDTLVNNAGIT--RDTLLVRMKDEDWEAVLEANLSAVF 116

Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
           R T+  +  MM+ + G IVNI S
Sbjct: 117 RTTREAVKLMMKARFGRIVNITS 139

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  101 bits (254), Expect = 2e-26
 Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 15/149 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITGA  GIG   +  LA+ G  ++L       L   +  +             +    
Sbjct: 14  AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRG--------AVH-HVV 64

Query: 126 DVVSAGNIKA-IEMAID---GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           D+ +  +++A I+  ID    L++  + NN   + P  M   ++    W D   VN  GT
Sbjct: 65  DLTNEVSVRALIDFTIDTFGRLDI--VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGT 122

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             + K  +  ++    GAIVNI S  A  
Sbjct: 123 MLMCKYAIPRLISAGGGAIVNISSATAHA 151

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  101 bits (254), Expect = 2e-26
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 13/147 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TG   GIG+A A   A++G  +++   N +   +++NEI ++               
Sbjct: 30  CIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSK--------AFG-VRV 80

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV SA + ++ +E        V VL+NN G      +    + E+ W  I+ VN++G   
Sbjct: 81  DVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNV--VTIPEETWDRIMSVNVKGIFL 138

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            +K V+  M R   G+I+N  S  A  
Sbjct: 139 CSKYVIPVMRRNGGGSIINTTSYTATS 165

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  101 bits (253), Expect = 2e-26
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 16/145 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +ITGA+ GIG+A A + ++ G  L+L++R   +L+ ++               +     
Sbjct: 19  VVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP--------NTLCAQ----V 66

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV         I  A         ++NN G+     +     +  EW  +  VN+ G   
Sbjct: 67  DVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQI--DTQEANEWQRMFDVNVLGLLN 124

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAA 208
             +AVL  M  R  G I+NI S A 
Sbjct: 125 GMQAVLAPMKARNCGTIINISSIAG 149

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  100 bits (252), Expect = 2e-26
 Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 9/142 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           +L+TG+T GIG+A A +LA  G  +I+   +  + + ++ EI  +       +       
Sbjct: 10  SLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE-----M 64

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           +++S  +I    E   + +  + +L+NN GIT  +   F  +   +W ++++VNL GT  
Sbjct: 65  NLLSEESINKAFEEIYNLVDGIDILVNNAGIT--RDKLFLRMSLLDWEEVLKVNLTGTFL 122

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
           VT+  L  M++++ G IVNI S
Sbjct: 123 VTQNSLRKMIKQRWGRIVNISS 144

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  101 bits (253), Expect = 2e-26
 Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 13/142 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGAT GIG+A A      G  + L     +KL++I+ ++  +          + FS 
Sbjct: 30  ALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDV---------FVFSA 80

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           ++    +IK   E+A   +  + +L+NN GIT  +   F  + +++W D++ VNL   + 
Sbjct: 81  NLSDRKSIKQLAEVAEREMEGIDILVNNAGIT--RDGLFVRMQDQDWDDVLAVNLTAAST 138

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
           +T+ ++  MMRR+ G I+NI S
Sbjct: 139 LTRELIHSMMRRRYGRIINITS 160

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  100 bits (252), Expect = 2e-26
 Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 13/140 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           +LITGA+ GIG A A  L + G  +I+   N  KL+ + N ++                C
Sbjct: 17  SLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNY---------TIEVC 67

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           ++ +      +      L++  L+ N GIT         + ++++  ++ +NL+    + 
Sbjct: 68  NLANKEECSNLISKTSNLDI--LVCNAGIT--SDTLAIRMKDQDFDKVIDINLKANFILN 123

Query: 186 KAVLTGMMRRKKGAIVNIGS 205
           +  +  M++++ G I+NI S
Sbjct: 124 REAIKKMIQKRYGRIINISS 143

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 99.6 bits (249), Expect = 3e-26
 Identities = 34/145 (23%), Positives = 54/145 (37%), Gaps = 21/145 (14%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITGAT G+G AFA  L   G +L+L  R    L +++ E+ A                
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVGAR-----------ALPA 49

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           D+      KA+      L++  L++ VG     +    E       +++  +L       
Sbjct: 50  DLADELEAKALLEEAGPLDL--LVHAVGKAGRAS--VREAGRDLVEEMLAAHLLTA---- 101

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAIV 210
             VL     +K    V  G+    V
Sbjct: 102 AFVLKHARFQKGARAVFFGAYPRYV 126

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  100 bits (251), Expect = 3e-26
 Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 17/149 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +   A  GIG   + +L +  L   ++         ++ E++A NP   I    YD + 
Sbjct: 8   VIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALA-ELKAINPKVNITFHTYDVTV 66

Query: 126 DVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
            V  +   K ++   D L  V +LIN  GI           D+ +    + +N  G    
Sbjct: 67  PVAESK--KLLKKIFDQLKTVDILINGAGIL----------DDHQIERTIAINFTGLVNT 114

Query: 185 TKAVLTGMMRRKKG---AIVNIGSGAAIV 210
           T A+L    +RK G    I NI S     
Sbjct: 115 TTAILDFWDKRKGGPGGIIANICSVTGFN 143

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  101 bits (253), Expect = 3e-26
 Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 13/149 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           ALITGA  GIG+A A  LA  G+ +  + R   ++E++++EI                  
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIA------LEA 84

Query: 126 DVVSAGNIKA-IEMAID---GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV     ++  +   +     L++  ++ N GI    A    ++   EW + + VNL GT
Sbjct: 85  DVSDELQMRNAVRDLVLKFGHLDI--VVANAGINGVWAPI-DDLKPFEWDETIAVNLRGT 141

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
                  +  + +R  GAIV + S     
Sbjct: 142 FLTLHLTVPYLKQRGGGAIVVVSSINGTR 170

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  100 bits (251), Expect = 3e-26
 Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 11/148 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIGKA A +L + G  + +   N    + +++EI     +            
Sbjct: 5   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVA------VKV 58

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV     + A +E A   L    V++NN G+    +     +  +    +  +N++G   
Sbjct: 59  DVSDRDQVFAAVEQARKTLGGFDVIVNNAGVA--PSTPIESITPEIVDKVYNINVKGVIW 116

Query: 184 VTKAVLTGMMRRKK-GAIVNIGSGAAIV 210
             +A +    +    G I+N  S A  V
Sbjct: 117 GIQAAVEAFKKEGHGGKIINACSQAGHV 144

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  100 bits (251), Expect = 3e-26
 Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 12/147 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TG+T GIG   A  LA+ G N++L             EI                  
Sbjct: 7   ALVTGSTSGIGLGIAQVLARAGANIVLNGFG--DPAPALAEIARHGVKAVH------HPA 58

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+     I+A   +A      V +L+NN GI +       +   + W  I+ +NL     
Sbjct: 59  DLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAP--VEQFPLESWDKIIALNLSAVFH 116

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            T+  L GM  R  G I+NI S   +V
Sbjct: 117 GTRLALPGMRARNWGRIINIASVHGLV 143

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  100 bits (251), Expect = 4e-26
 Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 12/147 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITG  +GIG+A A + A  G ++ +         +    I+                C
Sbjct: 10  AVITGGANGIGRAIAERFAVEGADIAIADLV--PAPEAEAAIRNLGRRVLT------VKC 61

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV   G+++A  +  I       +L+NN GI     + F E+  ++W     +N++    
Sbjct: 62  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIY--PLIPFDELTFEQWKKTFEINVDSGFL 119

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           + KA + GM R   G I+N+ S    +
Sbjct: 120 MAKAFVPGMKRNGWGRIINLTSTTYWL 146

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  100 bits (252), Expect = 4e-26
 Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 14/149 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA  G+G+A A  LA  G  + L  R  + L++ + EI  +               
Sbjct: 31  AIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDD---------ALCVPT 81

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV    +++A     ++    V VL NN G   P A+   ++   +W  +V  NL G   
Sbjct: 82  DVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAP-AIPMEDLTFAQWKQVVDTNLTGPFL 140

Query: 184 VTKAVLTGMMRRKK--GAIVNIGSGAAIV 210
            T+     M  ++   G I+N GS +A  
Sbjct: 141 CTQEAFRVMKAQEPRGGRIINNGSISATS 169

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  100 bits (250), Expect = 5e-26
 Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 14/152 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TGA+ GIG+  A QL + G  + +  R+ + L  ++ E Q+               C
Sbjct: 8   CVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVP------VVC 61

Query: 126 DVVSAGNIKAIEMAIDGLEVG---VLINNVGITYPKAMF-----FHEVDEKEWMDIVRVN 177
           D      ++++   +D  + G   VL+NN        +      F E     W DI  V 
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121

Query: 178 LEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
           L G    +      M+   +G IV I S  ++
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISSPGSL 153

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  100 bits (251), Expect = 5e-26
 Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 24/149 (16%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TG + GIG A    L ++G  ++ VS +      +S+  +                 
Sbjct: 17  AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK----------------I 60

Query: 126 DVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV +   +K  +E      + G   +L+NN GI     +  H    + W  I+ VN+ G+
Sbjct: 61  DVTNEEEVKEAVEKTTK--KYGRIDILVNNAGIEQYSPL--HLTPTEIWRRIIDVNVNGS 116

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             + K  +  M+    G+I+NI S  +  
Sbjct: 117 YLMAKYTIPVMLAIGHGSIINIASVQSYA 145

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =   99 bits (250), Expect = 7e-26
 Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 21/147 (14%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIG A    L   G  + +  R    +                   +     
Sbjct: 31  ALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-----------------DLHLPG 73

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+  A            GL  + +++NN G+         E  + +W   + VN+E   R
Sbjct: 74  DLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGR--ITETTDADWSLSLGVNVEAPFR 131

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           + +A +  M     GAIVN+ S   + 
Sbjct: 132 ICRAAIPLMAAAGGGAIVNVASCWGLR 158

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =   99 bits (250), Expect = 8e-26
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 13/149 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA+ GIG+A A   A+ G  +++ +RN N L ++++EI                + 
Sbjct: 11  AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAA------LAG 64

Query: 126 DVVSAGNIKA-IEMAID---GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV      +A +E+A+    GL+     NN G           +  + W + +  NL   
Sbjct: 65  DVGDEALHEALVELAVRRFGGLDT--AFNNAGALGAMGEI-SSLSVEGWRETLDTNLTSA 121

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
               K  +  +     G++    S     
Sbjct: 122 FLAAKYQVPAIAALGGGSLTFTSSFVGHT 150

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 99.2 bits (248), Expect = 8e-26
 Identities = 24/142 (16%), Positives = 49/142 (34%), Gaps = 15/142 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++T      G   A +L++ G  +     +  + +++    +                 
Sbjct: 4   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETY------------PQL 51

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
             +S       IE       +V VL++N     P+     +   +++   V         
Sbjct: 52  KPMSEQEPAELIEAVTSAYGQVDVLVSNDIFA-PEFQPIDKYAVEDYRGAVEALQIRPFA 110

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
           +  AV + M +RK G I+ I S
Sbjct: 111 LVNAVASQMKKRKSGHIIFITS 132

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 99.5 bits (249), Expect = 8e-26
 Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 15/145 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TG + G+G   A  LA+ G ++++ SRN  +  + + ++  +     +        C
Sbjct: 24  ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR-----C 78

Query: 126 DVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           DV    N + ++  ++ ++     +  ++N  GI         E    E+  ++ VNL G
Sbjct: 79  DV---SNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPA--EEFPLDEFRQVIEVNLFG 133

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGS 205
           T  V +   + +      +I+NIGS
Sbjct: 134 TYYVCREAFSLLRESDNPSIINIGS 158

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 98.7 bits (247), Expect = 1e-25
 Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 12/150 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA+ G G A A +    G  +  +  +   LE+ +        +  + +       
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVR-----A 59

Query: 126 DVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYP-KAMFFHEVDEKEWMDIVRVNLEG 180
           DV   G++ A I   ++  + G   VL+NN GIT   +A   H    +++  ++ VN+ G
Sbjct: 60  DVADEGDVNAAIAATME--QFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRG 117

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
                +AVL  M+ +  G IVNI S A++V
Sbjct: 118 IFLGCRAVLPHMLLQGAGVIVNIASVASLV 147

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 99.1 bits (248), Expect = 1e-25
 Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 11/149 (7%)

Query: 66  ALITGATD-GIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
            L+T A   GIG   A +    G ++++   +  +L +  +++          +V     
Sbjct: 25  VLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV----- 79

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           CDV S   + A I   ++    + VL+NN G+         ++ ++EW  ++ V L    
Sbjct: 80  CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG--GQTPVVDMTDEEWDRVLNVTLTSVM 137

Query: 183 RVTKAVLTGMMRRKK-GAIVNIGSGAAIV 210
           R T+A L         G IVN  S     
Sbjct: 138 RATRAALRYFRGVDHGGVIVNNASVLGWR 166

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 98.8 bits (247), Expect = 1e-25
 Identities = 27/147 (18%), Positives = 54/147 (36%), Gaps = 19/147 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +ITGA+ GIG             ++  SR+         +                 + 
Sbjct: 31  VVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----DPDIHT-----------VAG 75

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+         +   I+    +  L+NN G+    A  F E+ ++++   + VN+ G   
Sbjct: 76  DISKPETADRIVREGIERFGRIDSLVNNAGVF--LAKPFVEMTQEDYDHNLGVNVAGFFH 133

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +T+     M+++  G IV+I +     
Sbjct: 134 ITQRAAAEMLKQGSGHIVSITTSLVDQ 160

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 98.8 bits (247), Expect = 2e-25
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 10/141 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA  GIG+A AH  A+ G +++   R    ++++++EI     + +          
Sbjct: 34  AVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEA------VVA 86

Query: 126 DVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
           D+        +   +     V VL+NN GI         EV    W +++ VNL+    +
Sbjct: 87  DLADLEGAANVAEELAATRRVDVLVNNAGIIARAPA--EEVSLGRWREVLTVNLDAAWVL 144

Query: 185 TKAVLTGMMRRKKGAIVNIGS 205
           +++  T M+    G IV I S
Sbjct: 145 SRSFGTAMLAHGSGRIVTIAS 165

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 98.5 bits (246), Expect = 2e-25
 Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 10/148 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFS 124
           A++TG+T GIG   A  LA  G +++L       ++EK+   + A++    +        
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD-----G 61

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            D+     ++  ++ A+  +  + +L+NN GI +       +   ++W  I+ +NL    
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IEDFPTEKWDAILALNLSAVF 119

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             T A L  M ++  G I+NI S   +V
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLV 147

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 97.5 bits (244), Expect = 3e-25
 Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 17/141 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TG + GIG+A A  L   G  + + SRN  +  +    + A                
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ---SLGAVP-----------LPT 50

Query: 126 DVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
           D+        ++ A++ L  + VL++   +   K     E+  +EW  ++ ++L+    +
Sbjct: 51  DLEKDDPKGLVKRALEALGGLHVLVHAAAVNVRKPA--LELSYEEWRRVLYLHLDVAFLL 108

Query: 185 TKAVLTGMMRRKKGAIVNIGS 205
            +A    M     G ++ IGS
Sbjct: 109 AQAAAPHMAEAGWGRVLFIGS 129

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 97.6 bits (244), Expect = 3e-25
 Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 14/148 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIGKA A +LA  G  +I+   N    +  +  I  +             + 
Sbjct: 9   ALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKK---------ARAIAA 59

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+   G++KA           + +L+NN  I     + + +VD   W  I+ VNL GT  
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASIV--PFVAWDDVDLDHWRKIIDVNLTGTFI 117

Query: 184 VTKAVLTGMMRRKK-GAIVNIGSGAAIV 210
           VT+A    M    K G +++I S     
Sbjct: 118 VTRAGTDQMRAAGKAGRVISIASNTFFA 145

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 98.0 bits (245), Expect = 5e-25
 Identities = 32/149 (21%), Positives = 67/149 (44%), Gaps = 13/149 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITG   GIG+  A    ++G  +++     +  +K+ N I + +      ++ +   C
Sbjct: 19  AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD------VISF-VHC 71

Query: 126 DVVSAGNIKA-IEMAID---GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV    +++  ++  I     L++  +  NVG+         E   +++  ++ +N+ G 
Sbjct: 72  DVTKDEDVRNLVDTTIAKHGKLDI--MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGA 129

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             V K     M+  KKG+IV   S ++  
Sbjct: 130 FLVAKHAARVMIPAKKGSIVFTASISSFT 158

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 97.6 bits (244), Expect = 6e-25
 Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 17/149 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TGA  GIG A A +LA  G +++    + +  +  + +I                  
Sbjct: 32  AIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCG--------AAA-CRV 82

Query: 126 DVVSAGNIKA-IEMAID---GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV     I A ++  +    G++   L+ N G+ +  ++   +   +++  ++ +NL G 
Sbjct: 83  DVSDEQQIIAMVDACVAAFGGVDK--LVANAGVVHLASL--IDTTVEDFDRVIAINLRGA 138

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              TK     M+ R  GAIVN+ S A  V
Sbjct: 139 WLCTKHAAPRMIERGGGAIVNLSSLAGQV 167

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 97.2 bits (243), Expect = 6e-25
 Identities = 38/147 (25%), Positives = 55/147 (37%), Gaps = 16/147 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TG   GIG+A A   A+ G  + L        E ++  I               F  
Sbjct: 9   VLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAIGGA-----------FFQV 56

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+         +E A   L  V VL+NN  I  P +     V   EW  ++ VNL     
Sbjct: 57  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSA--LTVRLPEWRRVLEVNLTAPMH 114

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           ++      M +   GAIVN+ S   + 
Sbjct: 115 LSALAAREMRKVGGGAIVNVASVQGLF 141

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 97.7 bits (244), Expect = 7e-25
 Identities = 32/147 (21%), Positives = 61/147 (41%), Gaps = 10/147 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +ITG+++GIG++ A   A+ G  + +  RN ++LE+   +I       +          
Sbjct: 29  VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA---VVA 85

Query: 126 DVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV  A      I   +   + G   +L+NN G          +   + +    ++N +  
Sbjct: 86  DVTEASGQDDIINTTLA--KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 143

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAA 208
             +T+      + + KG IVN+ S  A
Sbjct: 144 IEMTQKTKE-HLIKTKGEIVNVSSIVA 169

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 96.4 bits (241), Expect = 8e-25
 Identities = 18/149 (12%), Positives = 45/149 (30%), Gaps = 17/149 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKL-EKISNEIQAENPNTQINIVEYDFS 124
           AL+T A    G A    L Q G  ++    +     E+   E +                
Sbjct: 4   ALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-------------PG 50

Query: 125 CDVVSAGNIKA-IEMAIDGLE-VGVLINNVGITYPK-AMFFHEVDEKEWMDIVRVNLEGT 181
              ++    +  ++  +   E +  +++N  I  P   +      E +   +        
Sbjct: 51  TIALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFP 110

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             + ++ +  +      +++ I S     
Sbjct: 111 ILLLQSAIAPLRAAGGASVIFITSSVGKK 139

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 96.0 bits (240), Expect = 2e-24
 Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 11/148 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TG++ G+GKA A +LA++G N+++  +R+     + + EI+       +        
Sbjct: 7   ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLV------VK 60

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            +V     IK   +   +    + V +NN            E++E  W   + +N +   
Sbjct: 61  ANVGQPAKIKEMFQQIDETFGRLDVFVNNAASG--VLRPVMELEETHWDWTMNINAKALL 118

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              +     M +   G IV+I S  +I 
Sbjct: 119 FCAQEAAKLMEKNGGGHIVSISSLGSIR 146

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 95.7 bits (239), Expect = 2e-24
 Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 14/148 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           ALITG+  GIG+AFA    + G  + +   +  +  + + EI             Y    
Sbjct: 11  ALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAA---------YAVQM 61

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV    +I A I   ++    + +L+NN  +         E+  + +  +  +N+ GT  
Sbjct: 62  DVTRQDSIDAAIAATVEHAGGLDILVNNAALF--DLAPIVEITRESYEKLFAINVAGTLF 119

Query: 184 VTKAVLTGMMRR-KKGAIVNIGSGAAIV 210
             +A    M+ + + G I+N+ S A   
Sbjct: 120 TLQAAARQMIAQGRGGKIINMASQAGRR 147

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 95.7 bits (239), Expect = 2e-24
 Identities = 30/149 (20%), Positives = 59/149 (39%), Gaps = 18/149 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TG   GIG          G  +++  ++ +    +  E+             +   C
Sbjct: 12  VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG---------AVF-ILC 61

Query: 126 DVVSAGNIKA-IEMAID---GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV    ++K  +   I     L+   ++NN G   P      E   + +  ++ +NL GT
Sbjct: 62  DVTQEDDVKTLVSETIRRFGRLD--CVVNNAGHHPPPQR-PEETSAQGFRQLLELNLLGT 118

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             +TK  L   +R+ +G ++NI S    +
Sbjct: 119 YTLTKLALP-YLRKSQGNVINISSLVGAI 146

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 95.3 bits (238), Expect = 3e-24
 Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 16/151 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           ALITGA  G G+  A + A+ G  +++V R+    E+++ EI                + 
Sbjct: 12  ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDA--------ALA-VAA 62

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+    ++ A +E A+    +V +L+NN GI +        V+ +E+  IV VN+ G   
Sbjct: 63  DISKEADVDAAVEAALSKFGKVDILVNNAGIGHK-PQNAELVEPEEFDRIVGVNVRGVYL 121

Query: 184 VTKAVLTGMMRRKKGA----IVNIGSGAAIV 210
           +T  ++              I+N+ S  A  
Sbjct: 122 MTSKLIPHFKENGAKGQECVILNVASTGAGR 152

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 95.3 bits (238), Expect = 3e-24
 Identities = 29/147 (19%), Positives = 52/147 (35%), Gaps = 20/147 (13%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
             +TGA  GIG A A    + G  +    +      +       E               
Sbjct: 10  VWVTGAGKGIGYATALAFVEAGAKVTGFDQA---FTQEQYPFATE-------------VM 53

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV  A  +    +  +     +  L+N  GI   +     ++ +++W     VN+ G   
Sbjct: 54  DVADAAQVAQVCQRLLAETERLDALVNAAGIL--RMGATDQLSKEDWQQTFAVNVGGAFN 111

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           + +  +    R++ GAIV + S AA  
Sbjct: 112 LFQQTMNQFRRQRGGAIVTVASDAAHT 138

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 95.7 bits (239), Expect = 3e-24
 Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 14/150 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAE-NPNTQINIVEYDFS 124
            +ITG+++GIG+  A   AQ G N+ +  R+  +LE+    I        Q+N V     
Sbjct: 9   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV---- 64

Query: 125 CDVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYPKAMF--FHEVDEKEWMDIVRVNL 178
            DV +       I   +   + G   VL+NN G   P A      +     +   +++NL
Sbjct: 65  ADVTTEDGQDQIINSTLK--QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
           +    +TK V    +   KG IVN+ S  A
Sbjct: 123 QAVIEMTKKVKP-HLVASKGEIVNVSSIVA 151

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 94.9 bits (237), Expect = 4e-24
 Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 21/142 (14%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TG   GIG A A   A  G  + +  R+    E                       C
Sbjct: 24  VLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGF-----------------LAVKC 66

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+     ++   +   +    V VLI N G+T  K      + E+++  +V  NL GT R
Sbjct: 67  DITDTEQVEQAYKEIEETHGPVEVLIANAGVT--KDQLLMRMSEEDFTSVVETNLTGTFR 124

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
           V K     M+R KKG +V I S
Sbjct: 125 VVKRANRAMLRAKKGRVVLISS 146

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 94.9 bits (237), Expect = 4e-24
 Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 25/149 (16%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TGA+ GIG+A A +    G  +I +S +     K                      C
Sbjct: 11  VIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYD-----------------HIEC 53

Query: 126 DVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           DV +   +KA I+      E G   VL+NN GI     +    +   EW  I+ VNL G 
Sbjct: 54  DVTNPDQVKASIDHIFK--EYGSISVLVNNAGIESYGKI--ESMSMGEWRRIIDVNLFGY 109

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              +K  +  M+R +  +IVNI S  A +
Sbjct: 110 YYASKFAIPYMIRSRDPSIVNISSVQASI 138

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 94.5 bits (236), Expect = 5e-24
 Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TG   GIG A A +LA  G  + +  R     + +                 +    
Sbjct: 18  VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----------------FGVEV 60

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV  +  +        +    V VL++N G++     F   + E+++  ++  NL G  R
Sbjct: 61  DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS--ADAFLMRMTEEKFEKVINANLTGAFR 118

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
           V +     M R K G ++ IGS
Sbjct: 119 VAQRASRSMQRNKFGRMIFIGS 140

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 94.5 bits (236), Expect = 6e-24
 Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 15/146 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TGA  GIG+A     A+ G +L+ V R    L +    ++AE               
Sbjct: 9   ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE---------AIAVVA 59

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV     ++A    A++    +  + +  G+    +     +  + W  ++RVNL G+  
Sbjct: 60  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVA--HSALSWNLPLEAWEKVLRVNLTGSFL 117

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAI 209
           V +     +     G++V  GS A +
Sbjct: 118 VARKAGEVLEE--GGSLVLTGSVAGL 141

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 94.6 bits (236), Expect = 7e-24
 Identities = 21/147 (14%), Positives = 47/147 (31%), Gaps = 16/147 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITGA+  +G   A +L +HG  +I+   ++        E++                 
Sbjct: 30  ILITGASQRVGLHCALRLLEHGHRVII---SYRTEHASVTELRQAGAVA--------LYG 78

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D      I A I++       +  +++N      +       +   +  +  V++     
Sbjct: 79  DFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETP---GEEADNFTRMFSVHMLAPYL 135

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +       +   +   IV+I       
Sbjct: 136 INLHCEPLLTASEVADIVHISDDVTRK 162

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 94.6 bits (236), Expect = 7e-24
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 19/150 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIG+AFA  L   G  + LV  N     +    +  +    +   ++    C
Sbjct: 10  ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ----C 65

Query: 126 DVVSAGNIKA-IEMAIDGLE-VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV     ++      +D    + +L+NN G+           +EK W   +++NL     
Sbjct: 66  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVN----------NEKNWEKTLQINLVSVIS 115

Query: 184 VTKAVLTGMMRRKKG---AIVNIGSGAAIV 210
            T   L  M ++  G    I+N+ S A ++
Sbjct: 116 GTYLGLDYMSKQNGGEGGIIINMSSLAGLM 145

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 94.2 bits (235), Expect = 7e-24
 Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 13/150 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV--SRNHNKLEKISNEIQAENPNTQINIVEYDF 123
           A++TG   GIG+  + +LA  G ++ +    +   +  +    I+A +            
Sbjct: 5   AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVF------V 58

Query: 124 SCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
             DV    N  + I+ A + L    VL+NN GI   K     EV E++   I  VN+   
Sbjct: 59  GLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKP--LLEVTEEDLKQIYSVNVFSV 116

Query: 182 TRVTKAVLTGMMRRK-KGAIVNIGSGAAIV 210
               +A          KG I+N  S AAI 
Sbjct: 117 FFGIQAASRKFDELGVKGKIINAASIAAIQ 146

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 93.7 bits (234), Expect = 9e-24
 Identities = 34/147 (23%), Positives = 56/147 (38%), Gaps = 13/147 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +ITG   G+G   A Q    G  ++L      +    + E+             Y    
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA--------ARY-QHL 58

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV    + +  +  A +    V  L+NN GI+    +       + +  +V +NL G   
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL--ETESVERFRKVVEINLTGVFI 116

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             K V+  M     G+IVNI S A ++
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLM 143

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 93.3 bits (233), Expect = 2e-23
 Identities = 31/149 (20%), Positives = 66/149 (44%), Gaps = 12/149 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFS 124
            +ITG++ G+GK+ A + A     +++  R+  ++   +  EI+                
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA------VK 63

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            DV    ++   ++ AI    ++ V+INN G+  P +   HE+   +W  ++  NL G  
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVS--SHEMSLSDWNKVIDTNLTGAF 121

Query: 183 RVTKAVLTGMMR-RKKGAIVNIGSGAAIV 210
             ++  +   +    KG ++N+ S    +
Sbjct: 122 LGSREAIKYFVENDIKGTVINMSSVHEKI 150

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 93.4 bits (233), Expect = 2e-23
 Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 9/143 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           ALIT  T G+GK    +L   G ++ +    +   +E +    +      Q         
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQF------VQ 63

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            DV    ++   +E A+    ++  LINN G    +     + +E EW ++++ NL    
Sbjct: 64  ADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVF 123

Query: 183 RVTKAVLTGMMRRKKGAIVNIGS 205
            + K V+  M ++  G I+N G 
Sbjct: 124 HLLKLVVPVMRKQNFGRIINYGF 146

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 93.4 bits (233), Expect = 2e-23
 Identities = 32/143 (22%), Positives = 65/143 (45%), Gaps = 10/143 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TG   GIG AF   +A  G N+ ++ R+     +++ ++  E       +    + C
Sbjct: 17  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-----GVKTKAYQC 71

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV +   +   I+     L  +  LI N G++  K     E+  +++  +  VN+ G   
Sbjct: 72  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPAT--ELTHEDFAFVYDVNVFGVFN 129

Query: 184 VTKAVLTGMMRRKK-GAIVNIGS 205
             +AV    +++++ G+IV   S
Sbjct: 130 TCRAVAKLWLQKQQKGSIVVTSS 152

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 95.4 bits (238), Expect = 3e-23
 Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNH--NKLEKISNEIQAENPNTQINIVEYDF 123
           A++TGA  GIG   A   A+ G  ++ +  +     L+++++++                
Sbjct: 216 AVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGT-----------AL 264

Query: 124 SCDVVSAGNIKAIEMAID---GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           + DV +   +  I   +    G +V +L+NN GIT  +      +DEK W  ++ VNL  
Sbjct: 265 TLDVTADDAVDKITAHVTEHHGGKVDILVNNAGIT--RDKLLANMDEKRWDAVIAVNLLA 322

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGS 205
             R+T+ ++      + G ++ + S
Sbjct: 323 PQRLTEGLVGNGTIGEGGRVIGLSS 347

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 93.0 bits (232), Expect = 3e-23
 Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 13/147 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL++G   G+G +    +   G  ++       + + ++ E+             Y    
Sbjct: 10  ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA--------ARY-VHL 60

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV      KA ++ A+     + VL+NN GI     +   +    EW  I+ VNL G   
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTI--EDYALTEWQRILDVNLTGVFL 118

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             +AV+  M    +G+I+NI S   + 
Sbjct: 119 GIRAVVKPMKEAGRGSIINISSIEGLA 145

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 93.0 bits (232), Expect = 3e-23
 Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 12/149 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITG+++GIG+A A   A+ G  + +  R+  +LE+   +I A   + Q          
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS---VVA 65

Query: 126 DVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYPKAMF--FHEVDEKEWMDIVRVNLE 179
           DV +       +   +   + G   +L+NN G   P +          + +   + +NL 
Sbjct: 66  DVTTDAGQDEILSTTLG--KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 123

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
               +TK  +   +   KG IVNI S A+
Sbjct: 124 SVIALTKKAVP-HLSSTKGEIVNISSIAS 151

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 92.2 bits (230), Expect = 4e-23
 Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 14/147 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TG   G+G      L   G  +     N    ++++ E+             +    
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER--------SMF-VRH 59

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV S  +    +      L  + VL+NN GI  P  M       +++  ++++N E    
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDM--ETGRLEDFSRLLKINTESVFI 117

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             +  +   M+   G+I+N+ S ++ +
Sbjct: 118 GCQQGI-AAMKETGGSIINMASVSSWL 143

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 93.0 bits (232), Expect = 4e-23
 Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 12/151 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           A++TG   GIG   A  LA  G ++ +    +   +  +  E+                 
Sbjct: 32  AIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIF------LR 85

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            D+    + +A ++  +     +  L+NN GI       F ++  + +  IV VNL GT 
Sbjct: 86  ADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTV 145

Query: 183 RVTKAVLTGMMR---RKKGAIVNIGSGAAIV 210
             T+AVL  M+    R   +I+NI S +A++
Sbjct: 146 FFTQAVLKAMLASDARASRSIINITSVSAVM 176

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 92.2 bits (230), Expect = 4e-23
 Identities = 31/145 (21%), Positives = 58/145 (40%), Gaps = 12/145 (8%)

Query: 66  ALITGATD--GIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYD 122
            ++TGA+   G+G   A   A+ G  + +  +      E+   E++         I    
Sbjct: 23  VVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-----GIKAKA 77

Query: 123 FSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           + C V S  + +  ++  +    ++   I N G T    +   +   + W  +V+V+L G
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGI--LDGSVEAWNHVVQVDLNG 135

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGS 205
           T    KAV      R  G++V   S
Sbjct: 136 TFHCAKAVGHHFKERGTGSLVITAS 160

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 91.8 bits (229), Expect = 5e-23
 Identities = 27/148 (18%), Positives = 56/148 (37%), Gaps = 25/148 (16%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TG + GIGKA    L Q+  + ++          I     AEN       +++    
Sbjct: 7   YLVTGGSKGIGKAVVELLLQNKNHTVINID-------IQQSFSAEN-------LKF-IKA 51

Query: 126 DVVSAGNIKAIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           D+    +I      +D ++      +  N GI    +    ++D +    ++ +N+  + 
Sbjct: 52  DLTKQQDITN---VLDIIKNVSFDGIFLNAGILIKGS--IFDIDIESIKKVLDLNVWSSI 106

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              K +   +  +   +IV  GS    +
Sbjct: 107 YFIKGLENNL--KVGASIVFNGSDQCFI 132

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 92.1 bits (229), Expect = 1e-22
 Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 14/153 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A +TG  +G+G     QL   G  + +     + ++K    ++AE    ++  V+     
Sbjct: 11  AFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQ----L 66

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV S    K   +        V +L NN G+   +     E    +W  ++ VNL G   
Sbjct: 67  DVASREGFKMAADEVEARFGPVSILCNNAGVNLFQP--IEESSYDDWDWLLGVNLHGVVN 124

Query: 184 VTKAVLTGMMRRKK------GAIVNIGSGAAIV 210
                +  M+ R K      G +VN  S AA +
Sbjct: 125 GVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL 157

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 91.0 bits (227), Expect = 1e-22
 Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 12/148 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITG T GIG A A +  + G  +++  R+ +  EK +  +   +       +++ F  
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQ------IQF-FQH 61

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D           +        V  L+NN GI   K+    E    EW  ++ VNL+G   
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKS--VEETTTAEWRKLLAVNLDGVFF 119

Query: 184 VTKAVLTGMMRRKKG-AIVNIGSGAAIV 210
            T+  +  M  +  G +I+N+ S    V
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFV 147

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 90.0 bits (224), Expect = 2e-22
 Identities = 22/147 (14%), Positives = 38/147 (25%), Gaps = 23/147 (15%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+ G +  +G            N I +    N     S                  F+ 
Sbjct: 25  ILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHS------------------FTI 66

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
                  IK+ IE       +V   +   G          +   K    ++ +NL     
Sbjct: 67  KDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNA-SSDEFLKSVKGMIDMNLYSAFA 125

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
                    +  + G  V  G+ AA+ 
Sbjct: 126 SAHIGA--KLLNQGGLFVLTGASAALN 150

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 91.8 bits (228), Expect = 3e-22
 Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 13/151 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD--- 122
             ITGA+ GIGKA A + A+ G N+++ ++      K+   I          I       
Sbjct: 48  VFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYT----AAEEIEAVGGKA 103

Query: 123 --FSCDVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
                DV     I  A+E AI     + +L+NN            +   K    ++ VN 
Sbjct: 104 LPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTN--TLDTPTKRLDLMMNVNT 161

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
            GT   +KA +  + + K   I+NI     +
Sbjct: 162 RGTYLASKACIPYLKKSKVAHILNISPPLNL 192

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 90.8 bits (226), Expect = 3e-22
 Identities = 30/172 (17%), Positives = 62/172 (36%), Gaps = 28/172 (16%)

Query: 55  QPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPN 113
           +  +++     A++TGA   IG+A A +L Q G  +++    +      +++E+  E  N
Sbjct: 17  RGSHME--APAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN 74

Query: 114 TQINIVEYDFSCDVVSAGNIKA-----IEMAIDGL-EVGVLINNVGITYPKAM------- 160
           T +         D+ ++  + A     I           VL+NN    YP  +       
Sbjct: 75  TAVV-----CQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHED 129

Query: 161 -FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMM------RRKKGAIVNIGS 205
               +  E +  +++  N      +T +                 +IVN+  
Sbjct: 130 NSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCD 181

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 89.9 bits (224), Expect = 3e-22
 Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 15/153 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
            LITG++ GIG A A   A+ G  + L   +    +++    ++A+  +         F+
Sbjct: 10  VLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAF------FA 63

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            D+ ++   +  ++  +     + VLINN G    +     E+D+  +  ++  N+    
Sbjct: 64  ADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKP-LPEIDDTFYDAVMDANIRSVV 122

Query: 183 RVTKAVLTGMMRR-----KKGAIVNIGSGAAIV 210
             TK  L  +        +  A+++ GS A   
Sbjct: 123 MTTKFALPHLAAAAKASGQTSAVISTGSIAGHT 155

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 88.8 bits (221), Expect = 1e-21
 Identities = 28/151 (18%), Positives = 62/151 (41%), Gaps = 13/151 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVE----- 120
             ITGA+ GIG A A + A+ G N+ + +++     K+   I +        +       
Sbjct: 9   LFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHS----AAAAVNAAGGQG 64

Query: 121 YDFSCDVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
               CD+     ++ A+   +D    + +L+NN    + +     +   K +  + +VN 
Sbjct: 65  LALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRG--TLDTPMKRFDLMQQVNA 122

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
            G+    +A L  +++     I+ +    ++
Sbjct: 123 RGSFVCAQACLPHLLQAPNPHILTLAPPPSL 153

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 88.2 bits (219), Expect = 3e-21
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 12/150 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQ---HGLNLILVSRNHNKLEKISNEIQAEN-PNTQINIVEY 121
            LITG + GIG   A +LA        +    R+     ++    +A   P   +  ++ 
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ- 63

Query: 122 DFSCDVVSAGNIK-AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
               DV  + ++  A E   +G  V VL+ N G+          + E     ++ VN+ G
Sbjct: 64  ---LDVRDSKSVAAARERVTEG-RVDVLVCNAGLGLLGP--LEALGEDAVASVLDVNVVG 117

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           T R+ +A L  M RR  G ++  GS   ++
Sbjct: 118 TVRMLQAFLPDMKRRGSGRVLVTGSVGGLM 147

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 87.9 bits (218), Expect = 4e-21
 Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI---QAENPNTQINIVEYD 122
            LITGA+ G G+  A  LA  G  +    R+       + E     A + +  +  +E  
Sbjct: 8   ILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLE-- 65

Query: 123 FSCDVVSAGNIK-AIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
              DV S  ++  AI+  I   E G   VLI+N G              +++ ++  +N+
Sbjct: 66  --LDVQSQVSVDRAIDQIIG--EDGRIDVLIHNAGHMVFGP--AEAFTPEQFAELYDINV 119

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             T RV +A L  M R+K G ++ I S ++  
Sbjct: 120 LSTQRVNRAALPHMRRQKHGLLIWISSSSSAG 151

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 87.3 bits (217), Expect = 5e-21
 Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 17/159 (10%)

Query: 56  PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQ 115
           P ++   G    I+G + GIG A A ++A  G N+ LV+++     K+   I        
Sbjct: 2   PGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYT----AA 57

Query: 116 INIVEYD-----FSCDVVSAGNIK-AIEMAIDGLEVG---VLINNVGITYPKAMFFHEVD 166
             I E          D+     +  A+   ++  + G   + +NN       +    EV 
Sbjct: 58  KEIEEAGGQALPIVGDIRDGDAVAAAVAKTVE--QFGGIDICVNNASAINLGS--IEEVP 113

Query: 167 EKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS 205
            K +  +  + + GT  V+++ +  M  R    I+ +  
Sbjct: 114 LKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSP 152

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 86.9 bits (216), Expect = 6e-21
 Identities = 30/146 (20%), Positives = 59/146 (40%), Gaps = 15/146 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TG + GIG+  A  L + G  + + +R+       +  + A      I         
Sbjct: 32  ALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAI-------PA 84

Query: 126 DVVSAGNIKAIEMAIDGLE--VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+ S    + +  A+  L   + +L+NN G ++  A          W  ++++N+     
Sbjct: 85  DLSSEAGARRLAQALGELSARLDILVNNAGTSWGAA--LESYPVSGWEKVMQLNVTSVFS 142

Query: 184 VTKAVLTGMMR----RKKGAIVNIGS 205
             + +L  + R         ++NIGS
Sbjct: 143 CIQQLLPLLRRSASAENPARVINIGS 168

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 86.0 bits (214), Expect = 1e-20
 Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 12/147 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
            ++ GA   IG+A A + AQ G N++L  +           EI+    +           
Sbjct: 11  IVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALA------IK 64

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            D+ +A  ++A I  A D   E+  L++  G    +     E+DE  W  ++ VNL    
Sbjct: 65  ADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKT-IAEMDEAFWHQVLDVNLTSLF 123

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAI 209
              K  L  M   K GAIV   S A  
Sbjct: 124 LTAKTALPKMA--KGGAIVTFSSQAGR 148

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 86.6 bits (215), Expect = 1e-20
 Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 11/148 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TG   GIG A A + A+ G  L+L   +   LE+  N ++ +  +       +   C
Sbjct: 34  AVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDA------HGVVC 87

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV     +    + A   L  V V+ +N GI    A    +++  +W  ++ ++L G+  
Sbjct: 88  DVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVV--AGPLAQMNHDDWRWVIDIDLWGSIH 145

Query: 184 VTKAVLTGMMRR-KKGAIVNIGSGAAIV 210
             +A L  ++ +   G I    S A +V
Sbjct: 146 AVEAFLPRLLEQGTGGHIAFTASFAGLV 173

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 85.4 bits (212), Expect = 2e-20
 Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 19/152 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           ALITG   G+G+A   +    G  + ++ ++  +L ++                      
Sbjct: 8   ALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGN--------AVG-VVG 58

Query: 126 DVVSAGNIKA-IEMAID---GLEVGVLINNVGITY---PKAMFFHEVDEKEWMDIVRVNL 178
           DV S  + K   E  +     ++   LI N GI       A    +  +  + DI  VN+
Sbjct: 59  DVRSLQDQKRAAERCLAAFGKID--TLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNV 116

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +G     KA L   +   +G++V   S A   
Sbjct: 117 KGYIHAVKACLP-ALVSSRGSVVFTISNAGFY 147

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 85.3 bits (212), Expect = 2e-20
 Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 13/151 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
            L+TG + GIG A     A+ G  + +  + N    + +   I                 
Sbjct: 29  VLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVA------IP 82

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            DV +A +I A           +  L+NN GI         E+  +    ++RVN+ G+ 
Sbjct: 83  GDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQR-VDEMSVERIERMLRVNVTGSI 141

Query: 183 RVTKAVLTGMMRRKK---GAIVNIGSGAAIV 210
                 +  M R      GAIVN+ S AAI+
Sbjct: 142 LCAAEAVRRMSRLYSGQGGAIVNVSSMAAIL 172

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 85.3 bits (212), Expect = 2e-20
 Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 22/159 (13%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHN------------KLEKISNEIQAENPN 113
           ALITG   G+G++ A  LA+ G ++ +  R  N             L +    ++     
Sbjct: 13  ALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG-- 70

Query: 114 TQINIVEYDFSCDVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWM 171
            +    +     DV     ++  +  A D L  + + I N GI+    +   EV+  +W 
Sbjct: 71  RRCISAK----VDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALL--PEVESAQWD 124

Query: 172 DIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +++  NL GT     AV  GM++R  G IV + S     
Sbjct: 125 EVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS 163

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 85.0 bits (211), Expect = 2e-20
 Identities = 25/152 (16%), Positives = 43/152 (28%), Gaps = 16/152 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
             ITG+  GIG A    LA+ G  +I + R    +E   +              E   + 
Sbjct: 4   IAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGG---------RETAVAA 54

Query: 126 DVVSAG-------NIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
            +   G           + +      + V +N  G++         +   +    V V  
Sbjct: 55  VLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGS 114

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              T+   A L  +     G        A   
Sbjct: 115 IAATQPGAAELPMVEAMLAGDEARAIELAEQQ 146

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 84.5 bits (210), Expect = 4e-20
 Identities = 27/150 (18%), Positives = 54/150 (36%), Gaps = 15/150 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL---VSRNHNKLEKISNEIQAENPNTQINIVEYD 122
            +I G    +G   A   A   +NL+L    +++ +   K+ +E++ +     +      
Sbjct: 14  IVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVAL------ 67

Query: 123 FSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
           +  D+ +   +    + A     +V + IN VG    K     E  E E+  +  +N + 
Sbjct: 68  YQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKP--IVETSEAEFDAMDTINNKV 125

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
                K     M     G I+ I +     
Sbjct: 126 AYFFIKQAAKHMN--PNGHIITIATSLLAA 153

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 84.2 bits (209), Expect = 5e-20
 Identities = 26/166 (15%), Positives = 59/166 (35%), Gaps = 26/166 (15%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           A+ITG    IG + A +L Q G  +++    +    +++  E+ A    + +        
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLC-----K 68

Query: 125 CDVVSAGNIKA-----IEMAIDGL-EVGVLINNVGITYPKAM---------FFHEVDEKE 169
            D+  + ++       I+ +        VL+NN    YP  +            +  + +
Sbjct: 69  GDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQ 128

Query: 170 WMDIVRVNLEGTTRVTKAVL-----TGMMRRKKGAIVNIGSGAAIV 210
             ++   N      + +A        G  R +  ++VN+      +
Sbjct: 129 VAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDL 174

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 84.2 bits (209), Expect = 6e-20
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 18/150 (12%)

Query: 65  WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           W L+TGA+ G G+A A      G  +I  +R    L+ +           +   +     
Sbjct: 8   W-LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDL-----VAAYPDRAEAIS---- 57

Query: 125 CDVVSAGNIK-AIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
            DV     I       +     G   VL+NN G T   A  F E  E+E  D+  +++ G
Sbjct: 58  LDVTDGERIDVVAADVLA--RYGRVDVLVNNAGRTQVGA--FEETTERELRDLFELHVFG 113

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             R+T+A+L  M  R  G++VNI S    +
Sbjct: 114 PARLTRALLPQMRERGSGSVVNISSFGGQL 143

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 83.4 bits (207), Expect = 2e-19
 Identities = 34/162 (20%), Positives = 68/162 (41%), Gaps = 26/162 (16%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV------------SRNHNKLEKISNEIQAENPN 113
           A ITGA  G G++ A  LA+ G ++I +                + L +   +++A    
Sbjct: 31  AFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-- 88

Query: 114 TQINIVEYDFSCDVVSAGNIK-AIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKE 169
            +I   +     DV     ++ A++  +   ++G   +++ N  +        + +D K 
Sbjct: 89  RRIIASQ----VDVRDFDAMQAAVDDGVT--QLGRLDIVLANAALASEGTRL-NRMDPKT 141

Query: 170 WMDIVRVNLEGTTRVTKAVLTGMMRRKK-GAIVNIGSGAAIV 210
           W D++ VNL G     +  +  +M  K+ G+IV   S   + 
Sbjct: 142 WRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR 183

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 82.2 bits (204), Expect = 2e-19
 Identities = 32/149 (21%), Positives = 57/149 (38%), Gaps = 19/149 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++ G T G+G A   +L + G  ++L  RN + + +I  E        +          
Sbjct: 11  AIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALR---------S 61

Query: 126 DVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           D+     I      A     +G   +L  N G++  +   F +V E  +     VN +G 
Sbjct: 62  DIADLNEIAVLGAAAGQ--TLGAIDLLHINAGVSELEP--FDQVSEASYDRQFAVNTKGA 117

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
               + +   +  R+ G+IV   S A   
Sbjct: 118 FFTVQRLTPLI--REGGSIVFTSSVADEG 144

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 82.2 bits (204), Expect = 3e-19
 Identities = 35/149 (23%), Positives = 53/149 (35%), Gaps = 19/149 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITGAT GIG A A +    G  + +  R  + L+    EI                  
Sbjct: 32  AVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGG--------AVG-IQA 82

Query: 126 DVVSAGNIKA-IEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           D  +   +    E      E G   VL  N G          EV E+++ D    N++G 
Sbjct: 83  DSANLAELDRLYEKVKA--EAGRIDVLFVNAGGGSMLP--LGEVTEEQYDDTFDRNVKGV 138

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
               +  L  +   +  ++V  GS A   
Sbjct: 139 LFTVQKALPLL--ARGSSVVLTGSTAGST 165

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 81.9 bits (203), Expect = 5e-19
 Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 30/166 (18%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV----------------SRNHNKLEKISNEIQA 109
           A +TGA  G G++ A +LAQ G ++I V                +     L + ++ ++ 
Sbjct: 14  AFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG 73

Query: 110 ENPNTQINIVEYDFSCDVVSAGNIK-AIEMAIDGLEVG---VLINNVGITYPKAMFFHEV 165
            N   +I   E     DV     +K A++  ++  ++G   +++ N GI         + 
Sbjct: 74  HN--RRIVTAE----VDVRDYDALKAAVDSGVE--QLGRLDIIVANAGIG-NGGDTLDKT 124

Query: 166 DEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK-GAIVNIGSGAAIV 210
            E++W +++ +NL G  +  KA +  M+   + G+I+   S   + 
Sbjct: 125 SEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLK 170

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 81.1 bits (201), Expect = 6e-19
 Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 23/158 (14%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
               ++TGA+ G+G A    LAQ G  ++ +       E+ + E+ A         V + 
Sbjct: 7   SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAA--------VRF- 57

Query: 123 FSCDVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMF----FHEVDEKEWMDIVRV 176
            + DV +  +   A+  A      V  L+N  G    + +      H +D   +   V V
Sbjct: 58  RNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALD--SFARTVAV 115

Query: 177 NLEGTTRVTKAVLTGMMRRK------KGAIVNIGSGAA 208
           NL GT  + +     M + +      +G IVN  S AA
Sbjct: 116 NLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAA 153

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 80.8 bits (200), Expect = 6e-19
 Identities = 17/145 (11%), Positives = 45/145 (31%), Gaps = 15/145 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+ G    +G             +  +    N+    S  ++  +  T+          
Sbjct: 10  VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTE--------QA 61

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           D V+A     +   +   +V  ++   G          +   K    + + ++  +T  +
Sbjct: 62  DQVTA----EVGKLLGDQKVDAILCVAGGWAGGN-AKSKSLFKNCDLMWKQSIWTSTISS 116

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAIV 210
                 +  ++ G +   G+ AA+ 
Sbjct: 117 HLATKHL--KEGGLLTLAGAKAALD 139

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 81.7 bits (202), Expect = 8e-19
 Identities = 31/178 (17%), Positives = 52/178 (29%), Gaps = 33/178 (18%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINI------ 118
           AL+TGA   +G++ A  L   G  + L   R+  +   +S  + A  PN+ I +      
Sbjct: 49  ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 108

Query: 119 ---VEYDFSCDVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAM---------- 160
                   +               +           VL+NN    YP  +          
Sbjct: 109 VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 168

Query: 161 --FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMM------RRKKGAIVNIGSGAAIV 210
                E  E    D+   N      + KA    +       R    +I+N+       
Sbjct: 169 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 226

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 81.1 bits (201), Expect = 9e-19
 Identities = 33/163 (20%), Positives = 71/163 (43%), Gaps = 28/163 (17%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-------------SRNHNKLEKISNEIQAENP 112
           A ITGA  G G+A A ++A  G ++I V               + + L +    ++A N 
Sbjct: 14  AFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN- 72

Query: 113 NTQINIVEYDFSCDVVSAGNIK-AIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEK 168
             +I         D      ++  ++  +    +G   +++ N G+  P+A  + ++  +
Sbjct: 73  -RRIVAAV----VDTRDFDRLRKVVDDGVA--ALGRLDIIVANAGVAAPQA--WDDITPE 123

Query: 169 EWMDIVRVNLEGTTRVTKAVLTGMMRRKK-GAIVNIGSGAAIV 210
           ++ D++ +N+ GT     A    ++   + G+I+ I S A + 
Sbjct: 124 DFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK 166

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 80.9 bits (200), Expect = 9e-19
 Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 23/150 (15%)

Query: 66  ALITGATDGIGKAFAHQLA-QHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TG   GIG A    L      +++L +R+  + +    ++QAE  +       +   
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLS-----PRF-HQ 60

Query: 125 CDVVS-------AGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVN 177
            D+            ++     +D     VL+NN GI +  A         +    ++ N
Sbjct: 61  LDIDDLQSIRALRDFLRKEYGGLD-----VLVNNAGIAFKVAD--PTPFHIQAEVTMKTN 113

Query: 178 LEGTTRVTKAVLTGMMRRKKGAIVNIGSGA 207
             GT  V   +L  +  + +G +VN+ S  
Sbjct: 114 FFGTRDVCTELLPLI--KPQGRVVNVSSIM 141

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 81.2 bits (201), Expect = 1e-18
 Identities = 31/178 (17%), Positives = 52/178 (29%), Gaps = 33/178 (18%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINI------ 118
           AL+TGA   +G++ A  L   G  + L   R+  +   +S  + A  PN+ I +      
Sbjct: 12  ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 71

Query: 119 ---VEYDFSCDVVSAGNIKAIEMAIDGLE-----VGVLINNVGITYPKAM---------- 160
                   +               +           VL+NN    YP  +          
Sbjct: 72  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 131

Query: 161 --FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMM------RRKKGAIVNIGSGAAIV 210
                E  E    D+   N      + KA    +       R    +I+N+       
Sbjct: 132 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 189

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 81.2 bits (201), Expect = 1e-18
 Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 20/154 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL---------VSRNHNKLEKISNEIQAENPNTQI 116
            L+TGA  G+G+A+A   A+ G  +++         V +  +  +K+  EI+        
Sbjct: 12  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 71

Query: 117 NIVEYDFSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVR 175
           N         V +   +  ++ A+D    + V++NN GI   ++  F  + +++W  I R
Sbjct: 72  NY------DSVEAGEKL--VKTALDTFGRIDVVVNNAGILRDRS--FSRISDEDWDIIQR 121

Query: 176 VNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
           V+L G+ +VT+A    M ++  G I+   S + I
Sbjct: 122 VHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI 155

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 82.1 bits (203), Expect = 2e-18
 Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 20/154 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHG----LNLILVSR-----NHNKLEKISNEIQAENPNTQI 116
            +ITGA  G+GK ++ + A+ G    +N +  +      N    + + +EI         
Sbjct: 11  VIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVA 70

Query: 117 NIVEYDFSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVR 175
           +        +V+    I  +E A+     V V+INN GI    +    ++ EK++  ++ 
Sbjct: 71  DY------NNVLDGDKI--VETAVKNFGTVHVIINNAGILRDAS--MKKMTEKDYKLVID 120

Query: 176 VNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
           V+L G   VTKA      ++K G IVN  S A +
Sbjct: 121 VHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGL 154

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 75.9 bits (187), Expect = 2e-16
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 18/151 (11%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKL---EKISNEIQAENPNTQINIV 119
               LITGA  G+GK +A   A++G  +++     N      K  +EI+A       +  
Sbjct: 322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVV-----NDFKDATKTVDEIKAAGGEAWPD-- 374

Query: 120 EYDFSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
                 DV        I+  ID    + +L+NN GI   ++  F ++ ++EW  + +V+L
Sbjct: 375 ----QHDVAKDSE-AIIKNVIDKYGTIDILVNNAGILRDRS--FAKMSKQEWDSVQQVHL 427

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
            GT  +++      + ++ G I+NI S + I
Sbjct: 428 IGTFNLSRLAWPYFVEKQFGRIINITSTSGI 458

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 80.0 bits (198), Expect = 2e-18
 Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 21/159 (13%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A+ITG   G+G A A +L   G + +L+   ++  E  + ++             + 
Sbjct: 12  GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN--------CVF- 62

Query: 123 FSCDVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEK----EWMDIVRV 176
              DV S  +++ A+ +A      V V +N  GI      +  +  +     ++  ++ V
Sbjct: 63  APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 122

Query: 177 NLEGTTRVTKAVLTGMMRRK------KGAIVNIGSGAAI 209
           NL GT  V + V   M + +      +G I+N  S AA 
Sbjct: 123 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF 161

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 80.4 bits (198), Expect = 2e-18
 Identities = 30/174 (17%), Positives = 63/174 (36%), Gaps = 38/174 (21%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++TG   GIG     QL+ +G+ ++L  R+  K  +   +++    +  +   + D + 
Sbjct: 15  AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS-NHENVVFHQLDVTD 73

Query: 126 DVVS----AGNIKAIEMAIDGLEVGVLINNVGITYP------------------------ 157
            + +    A  IK     +D     +L+NN G+                           
Sbjct: 74  PIATMSSLADFIKTHFGKLD-----ILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKI 128

Query: 158 ----KAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA 207
               +A        +   + +++N  G   VT+ ++  +       IVN+ S  
Sbjct: 129 YEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSST 182

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 79.9 bits (198), Expect = 2e-18
 Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 13/148 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           A++TGA+ GIG A A +LA  G  +++  +      E+++ +I+A               
Sbjct: 30  AIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALT------AQ 83

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            DV     ++     A +    V VL+NN GI         E  +  +  ++ VNL+GT 
Sbjct: 84  ADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIM--PLTTIAETGDAVFDRVIAVNLKGTF 141

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              +     +  R  G I+N+ +    +
Sbjct: 142 NTLREAAQRL--RVGGRIINMSTSQVGL 167

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 79.7 bits (197), Expect = 2e-18
 Identities = 35/161 (21%), Positives = 59/161 (36%), Gaps = 26/161 (16%)

Query: 66  ALITGATDGIGKAFAHQLAQ---HGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
            LITG   G+G      L        +L    RN  + +++  ++   + N  I      
Sbjct: 24  ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHI------ 76

Query: 123 FSCDVVSAGNIKAIEMAIDGLEVG----VLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
              D+ +      +   I+G+       VL NN GI  PK+     V  +E +D ++ N 
Sbjct: 77  LEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGI-APKSARITAVRSQELLDTLQTNT 135

Query: 179 EGTTRVTKAVL-----------TGMMRRKKGAIVNIGSGAA 208
                + KA L           +  M   + AI+N+ S   
Sbjct: 136 VVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 79.5 bits (197), Expect = 3e-18
 Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 16/157 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQ-INIVE---- 120
           A ITGA  G G++ A +LA  G ++I           ++    +     +   +VE    
Sbjct: 18  AFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR 77

Query: 121 --YDFSCDVVSAGNIK-AIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIV 174
                  DV     ++  +   ++  + G   V++ N G+     +   E+ +++W  ++
Sbjct: 78  KALTRVLDVRDDAALRELVADGME--QFGRLDVVVANAGVLSWGRV--WELTDEQWDTVI 133

Query: 175 RVNLEGTTRVTKAVLTGMMRRKK-GAIVNIGSGAAIV 210
            VNL GT R  +A +  M+     G+IV + S A + 
Sbjct: 134 GVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK 170

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 79.3 bits (196), Expect = 4e-18
 Identities = 32/159 (20%), Positives = 64/159 (40%), Gaps = 20/159 (12%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G+ A+++G   G+G+A   +L   GL +++      K + +++E+            E+ 
Sbjct: 30  GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNR--------AEF- 80

Query: 123 FSCDVVSAGNIK-AIEMAID-GLEVGVLINNVGITYPKAMFF---HEVDEKEWMDIVRVN 177
            S +V S  ++  AIE A   G     ++ + G    + +        D   +   + + 
Sbjct: 81  VSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLY 140

Query: 178 LEGTTRVTKAVLTGMMRRK------KGAIVNIGSGAAIV 210
           L GT  V + V   +   +      +GA+V   S A   
Sbjct: 141 LNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE 179

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 79.2 bits (196), Expect = 6e-18
 Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 27/162 (16%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV------------SRNHNKLEKISNEIQAENPN 113
           A ITGA  G G+  A +LAQ G +++ +              +  +L++    ++ +   
Sbjct: 49  AFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--G 106

Query: 114 TQINIVEYDFSCDVVSAGNIK-AIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKE 169
            +I   +     DV    +++  ++ A+   E G   +L++NVGI+    +    + +++
Sbjct: 107 RRIIARQ----ADVRDLASLQAVVDEALA--EFGHIDILVSNVGISNQGEV--VSLTDQQ 158

Query: 170 WMDIVRVNLEGTTRVTKAVLTGMMRRKK-GAIVNIGSGAAIV 210
           W DI++ NL G     +AVL  M+ R + G+++ + S   + 
Sbjct: 159 WSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR 200

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 78.8 bits (195), Expect = 6e-18
 Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 19/156 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVE----- 120
           A ITGA  G G+A A +LA  G ++I V                E     + +VE     
Sbjct: 16  AFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSR 75

Query: 121 -YDFSCDVVSAGNIK-AIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVR 175
                 DV    ++  A++  +D  E+G   +++ N GI            +  W D++ 
Sbjct: 76  IVARQADVRDRESLSAALQAGLD--ELGRLDIVVANAGIAPM------SAGDDGWHDVID 127

Query: 176 VNLEGTTRVTKAVLTGMMRRKK-GAIVNIGSGAAIV 210
           VNL G     K  +  ++++   G+IV I S A + 
Sbjct: 128 VNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLA 163

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 78.1 bits (193), Expect = 7e-18
 Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 19/156 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDF 123
            ++TGA  GIG     QL +     ++I  +R+  K    + E+++   +++++++    
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK----ATELKSI-KDSRVHVLPLTV 60

Query: 124 SCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           +CD      +  +   +    + +LINN G+         E +     + + VN      
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNT-EPNRAVIAEQLDVNTTSVVL 119

Query: 184 VTKAVL-----------TGMMRRKKGAIVNIGSGAA 208
           +T+ +L              +   + A++ I SG  
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 78.7 bits (194), Expect = 2e-17
 Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 28/158 (17%)

Query: 66  ALITGATDGIGKAFAHQLAQHG----LNLILVSR-----NHNKLEKISNEIQAEN----P 112
           A++TGA  G+G+ +A   A+ G    +N +  +      +    + + +EI+        
Sbjct: 22  AVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVA 81

Query: 113 NTQINIVEYDFSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWM 171
           +             V+    +  IE AI     V +L+NN GI   ++    +  E++W 
Sbjct: 82  DY----------NSVIDGAKV--IETAIKAFGRVDILVNNAGILRDRS--LVKTSEQDWN 127

Query: 172 DIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
            +  V+L+G+ + T+A    M ++  G I+   S + I
Sbjct: 128 LVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGI 165

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 76.4 bits (189), Expect = 3e-17
 Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 13/146 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           A +TG + GIG A A +LA  G  + L       + + + +EI+                
Sbjct: 34  AFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVA------IR 87

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            D   A  I+  I   ++ L  + +L+N+ GI +       E    ++ +++ VN     
Sbjct: 88  ADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAP--LEETTVADFDEVMAVNFRAPF 145

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAA 208
              ++    +     G I+ IGS  A
Sbjct: 146 VAIRSASRHL--GDGGRIITIGSNLA 169

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 76.2 bits (188), Expect = 4e-17
 Identities = 25/146 (17%), Positives = 44/146 (30%), Gaps = 35/146 (23%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +I+G   GIG A    L   G  ++ +                          + +   
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIR-----------------------DAEVIA 40

Query: 126 DVVSAGNIKAIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           D+ +A   K     +          L+   G+                 ++V VN  G T
Sbjct: 41  DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTK---------VLGNVVSVNYFGAT 91

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAA 208
            +  A L  + +  + A V I S A+
Sbjct: 92  ELMDAFLPALKKGHQPAAVVISSVAS 117

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 74.2 bits (183), Expect = 9e-17
 Identities = 18/145 (12%), Positives = 44/145 (30%), Gaps = 30/145 (20%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+ GA+  +G A   +L +    +I   R+                         D + 
Sbjct: 6   ILLIGASGTLGSAVKERLEKKA-EVITAGRH-----------------------SGDVTV 41

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           D+ +  +IK +   +  ++   +++  G          E+  ++    +   L G   + 
Sbjct: 42  DITNIDSIKKMYEQVGKVD--AIVSATGSATFSP--LTELTPEKNAVTISSKLGGQINLV 97

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAIV 210
              +  +    KG+           
Sbjct: 98  LLGIDSL--NDKGSFTLTTGIMMED 120

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 73.9 bits (182), Expect = 2e-16
 Identities = 17/144 (11%), Positives = 47/144 (32%), Gaps = 15/144 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++ G    +G A      ++G  ++ +  +       +N+    N     N    +   
Sbjct: 6   VIVYGGKGALGSAILEFFKKNGYTVLNIDLS-------ANDQADSNILVDGNKNWTEQ-E 57

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
             +          ++ G +V  +    G     +    +   K    +++ ++  +    
Sbjct: 58  QSILE----QTASSLQGSQVDGVFCVAGGWAGGS-ASSKDFVKNADLMIKQSVWSSAIAA 112

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAI 209
           K   T +  +  G +   G+ AA+
Sbjct: 113 KLATTHL--KPGGLLQLTGAAAAM 134

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 28/148 (18%), Positives = 59/148 (39%), Gaps = 13/148 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TGA  GIG+  A +L + G  +I+  + +    E++   I+    +           
Sbjct: 32  ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAAC------VK 85

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            +V    +I    E A+    ++ ++ +N G+         +V  +E+  +  +N  G  
Sbjct: 86  ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV--SFGHVKDVTPEEFDRVFTINTRGQF 143

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            V +     +     G ++ +GS     
Sbjct: 144 FVAREAYKHL--EIGGRLILMGSITGQA 169

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 30/147 (20%), Positives = 60/147 (40%), Gaps = 13/147 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL TGA  GIG+  A +L + G ++++    +    E++  E++                
Sbjct: 24  ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVA------IQ 77

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            D+     + A  + A+     +  +++N G+         EV ++ +  +  +N  G  
Sbjct: 78  ADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCD--ELEVTQELFDKVFNLNTRGQF 135

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAI 209
            V +  L     R+ G I+   S AA+
Sbjct: 136 FVAQQGLKHC--RRGGRIILTSSIAAV 160

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 34/155 (21%), Positives = 58/155 (37%), Gaps = 18/155 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVE----- 120
            L+TG   G G++ A +LA+ G ++IL    H+          + +       VE     
Sbjct: 13  VLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRK 72

Query: 121 -YDFSCDVVSAGNIK-AIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVR 175
            Y    DV     +   +  A+   E G   V++ N GI    A     +  + + D   
Sbjct: 73  AYTAEVDVRDRAAVSRELANAVA--EFGKLDVVVANAGICPLGA----HLPVQAFADAFD 126

Query: 176 VNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           V+  G      A L  +      +I+  GS A ++
Sbjct: 127 VDFVGVINTVHAALPYLTSG--ASIITTGSVAGLI 159

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 73.0 bits (180), Expect = 5e-16
 Identities = 27/158 (17%), Positives = 60/158 (37%), Gaps = 23/158 (14%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
            + A++TG   G+G A   +L   G  ++++       E +  ++             + 
Sbjct: 9   DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG---EDVVADLGDR--------ARF- 56

Query: 123 FSCDVVSAGNIK-AIEMAIDGLEVGVLINNVGITYPKAMFFHE--VDEKEWMDIVRVNLE 179
            + DV     +  A+++A     + +++N  G      +   +       +  IV +NL 
Sbjct: 57  AAADVTDEAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLV 116

Query: 180 GTTRVTKAVLTGMMRRK--------KGAIVNIGSGAAI 209
           G+  V +     + + +        +G I+N  S AA 
Sbjct: 117 GSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF 154

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 71.9 bits (177), Expect = 1e-15
 Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 27/153 (17%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TG   G+G+A A  L   G  ++++            +++ E  +            
Sbjct: 5   ALVTGGASGLGRAAALALKARGYRVVVL------------DLRREGEDLIY------VEG 46

Query: 126 DVVSAGNIK-AIEMAIDGLEVGVLINNVGITYPKAMFFHE--VDEKEWMDIVRVNLEGTT 182
           DV    +++ A+  A +   +  +++  G+   + +   E     + +  ++ VNL GT 
Sbjct: 47  DVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTF 106

Query: 183 RVTKAVLTGMMRRK------KGAIVNIGSGAAI 209
            V +     M          +G IVN  S AA 
Sbjct: 107 NVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF 139

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 71.8 bits (177), Expect = 2e-15
 Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 19/154 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TGA+ GIG+A A +LA  G  + +       + E+   EIQ+   +           
Sbjct: 10  ALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFS------IG 63

Query: 125 CDVVSAGNIKA-IEMAIDGLEVG-------VLINNVGITYPKAMFFHEVDEKEWMDIVRV 176
            ++ S   ++A      + L+         +LINN GI         E  E+ +  +V V
Sbjct: 64  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAF--IEETTEQFFDRMVSV 121

Query: 177 NLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           N +    + +  L+ +  R    I+NI S A  +
Sbjct: 122 NAKAPFFIIQQALSRL--RDNSRIINISSAATRI 153

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 71.1 bits (175), Expect = 3e-15
 Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 13/146 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TG+  GIG A A  L + G  +++  + +    EK+ +EI+A   +           
Sbjct: 21  ALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIA------IK 74

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            D+     I    + A+     + + ++N G+         +V E+E+  +  +N  G  
Sbjct: 75  ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGH--LKDVTEEEFDRVFSLNTRGQF 132

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAA 208
            V +     +   + G IV   S  +
Sbjct: 133 FVAREAYRHL--TEGGRIVLTSSNTS 156

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 70.9 bits (174), Expect = 7e-15
 Identities = 34/162 (20%), Positives = 63/162 (38%), Gaps = 26/162 (16%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLI----------LVSRNHNKLEKISNEIQAENPNTQ 115
            ++TGA  GIG+A A   A  G  ++            +   +  + + +EI A      
Sbjct: 30  VIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAV 89

Query: 116 INIVEYDFSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDI 173
            +        +V         I+ A++    + VL+NN GI   +        E+E+  +
Sbjct: 90  AD------GSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRM--IANTSEEEFDAV 141

Query: 174 VRVNLEGTTRVTKAV------LTGMMRRKKGAIVNIGSGAAI 209
           + V+L+G     +        L+   +   G I+N  SGA +
Sbjct: 142 IAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL 183

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 63.3 bits (155), Expect = 3e-12
 Identities = 30/146 (20%), Positives = 60/146 (41%), Gaps = 18/146 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNT---QINIVEY 121
            LITG   GIG+A +   A+ G N+ +          +    ++ E         ++ + 
Sbjct: 50  VLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDE 109

Query: 122 DFSCDVVSAGNIKAIEM--AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
               D+V     + +    +++     +L+NNV   YP+      +  ++     R+N+ 
Sbjct: 110 QHCKDIVQ----ETVRQLGSLN-----ILVNNVAQQYPQQG-LEYITAEQLEKTFRINIF 159

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGS 205
               VTKA L+ +  ++   I+N  S
Sbjct: 160 SYFHVTKAALSHL--KQGDVIINTAS 183

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 61.0 bits (149), Expect = 2e-11
 Identities = 25/150 (16%), Positives = 53/150 (35%), Gaps = 17/150 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV--SRNHNKLEKISNEIQAENPNTQINIVEYDF 123
           AL+TG   GIG+A A   A+ G ++ +          +++   I+       +       
Sbjct: 52  ALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVL------L 105

Query: 124 SCDVVSAGNIK-AIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
             D+      +  +  A + L  G   +L    G          ++  +++     VN+ 
Sbjct: 106 PGDLSDESFARSLVHKAREAL--GGLDILALVAGKQTAIPE-IKDLTSEQFQQTFAVNVF 162

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
               +T+  +  +   K  +I+   S  A 
Sbjct: 163 ALFWITQEAIPLL--PKGASIITTSSIQAY 190

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 56.5 bits (137), Expect = 6e-10
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 11/89 (12%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +ITGA  G+G   A +LA+ G  +I+  R+  K E  +  +  +     + + E     
Sbjct: 19  VVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ-----VEVRE----L 69

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGI 154
           D+    +++     + G +  VLINN GI
Sbjct: 70  DLQDLSSVRRFADGVSGAD--VLINNAGI 96

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 56.4 bits (136), Expect = 7e-10
 Identities = 20/148 (13%), Positives = 44/148 (29%), Gaps = 21/148 (14%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++   T  +G   A  LA  G  ++L  R  +K +  ++ +             + 
Sbjct: 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK----------RFK 168

Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            +       +  +   A+ G         +G+          + +  W +   + +    
Sbjct: 169 VNVTAAETADDASRAEAVKGAHFVFTAGAIGLE--------LLPQAAWQNESSIEIVADY 220

Query: 183 RVTK-AVLTGMMRRKKGAIVN--IGSGA 207
                  + G+    KG         GA
Sbjct: 221 NAQPPLGIGGIDATDKGKEYGGKRAFGA 248

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 67  LITGATDGIGKAFAHQLAQHGL-NLILVSR 95
           L+TG T G+G   A  LA+ G  +L+LVSR
Sbjct: 230 LVTGGTGGVGGQIARWLARRGAPHLLLVSR 259

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 66  ALITGATDGIGKAFAHQLAQHGL-NLILVSR 95
            L+TG T GIG   A +LA+ G  +L+L SR
Sbjct: 242 VLVTGGTGGIGGRVARRLAEQGAAHLVLTSR 272

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} Length = 511

 Score = 39.8 bits (93), Expect = 4e-04
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 67  LITGATDGIGKAFAHQLAQHGL-NLILVSR 95
           LITG    IG+  A +LA  G   L+L SR
Sbjct: 263 LITGGMGAIGRRLARRLAAEGAERLVLTSR 292

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 39.2 bits (92), Expect = 5e-04
 Identities = 25/144 (17%), Positives = 51/144 (35%), Gaps = 29/144 (20%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
             + GAT  +G   A  +   G +L+L+ R  ++++++           +      +   
Sbjct: 16  YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL--------AYLEPECRVAEML- 66

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
                 +   +E A+ G  +  +I + G              + W + V   L  T    
Sbjct: 67  ------DHAGLERALRG--LDGVIFSAGYY--------PSRPRRWQEEVASALGQTNPFY 110

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAI 209
            A L   + R    I+ +GS  A+
Sbjct: 111 AACLQARVPR----ILYVGSAYAM 130

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} Length = 525

 Score = 38.6 bits (90), Expect = 9e-04
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 67  LITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENP 112
           L+TGA +      A +LA+ G  +L+L +              AE+ 
Sbjct: 255 LVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDS 301

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	210
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.98
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.97
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.97
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.97
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.97
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.97
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.97
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.97
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.97
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.97
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.97
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.97
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.97
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.97
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.97
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.97
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.97
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.97
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.97
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.97
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.97
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.97
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.97
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.97
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.97
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.97
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.97
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.97
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.97
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.97
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.97
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.97
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.97
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.97
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.97
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.97
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.97
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.97
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.97
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.97
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.97
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.97
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.97
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.97
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.97
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.97
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.97
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.97
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.96
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.96
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.96
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.96
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.96
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.96
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.96
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.96
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.96
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.96
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.96
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.96
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.96
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.96
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.96
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.96
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.96
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.96
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.96
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.96
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.96
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.96
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.96
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.96
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.96
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.96
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.96
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.96
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.96
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.96
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.96
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.96
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.96
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.96
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.96
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.96
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.96
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.96
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.96
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.96
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.96
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.96
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.96
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.96
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.96
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.96
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.96
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.96
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.96
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.96
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.96
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.96
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.96
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.96
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.96
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.95
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.95
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.95
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.95
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.95
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.95
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.95
1spx_A	278	Short-chain reductase family member (5L265); paral	99.95
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.95
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.95
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.95
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.95
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.95
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.95
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.95
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.95
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.95
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.95
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.95
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.95
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.95
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.95
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.95
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.95
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.95
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.95
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.95
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.95
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.95
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.95
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.95
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.95
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.95
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.95
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.95
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.95
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.95
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.95
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.95
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.95
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.95
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.95
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.95
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.95
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.95
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.94
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.94
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.94
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.94
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.94
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.94
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.94
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.94
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.94
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.94
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.94
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.94
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.94
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.94
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.94
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.94
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.94
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.94
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.94
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.94
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.94
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.94
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.94
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.94
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.94
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.94
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.94
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.93
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.93
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.93
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.93
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.93
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.93
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.93
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.93
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.93
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.92
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.92
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.92
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.92
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.92
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.92
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.92
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.91
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.91
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.91
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.91
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.91
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.9
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.9
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.89
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.89
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.89
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.88
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.88
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.87
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.87
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.86
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.85
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.85
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.84
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.82
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.82
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.8
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.8
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.79
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.78
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.75
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.74
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.73
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.73
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.73
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.72
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.71
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.71
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.7
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.69
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.69
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.69
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.69
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.67
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.67
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.67
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.66
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.66
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.66
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.66
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.65
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.65
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.65
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.65
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.64
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.63
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.63
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.63
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.62
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.62
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.62
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.62
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.62
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.61
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.61
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.61
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.6
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.59
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.58
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.58
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.58
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.58
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.58
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.58
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.58
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.57
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.57
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.56
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.55
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.55
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.54
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.54
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.54
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.54
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.53
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.53
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.53
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.51
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.51
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.49
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.48
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.48
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.46
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.46
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.45
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.4
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.4
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.39
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.38
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.38
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.37
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.35
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.35
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.34
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.34
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.34
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.3
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.29
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.28
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.25
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.22
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.16
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.15
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.14
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.13
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.13
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.1
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.08
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.06
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.03
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.01
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.92
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.87
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.87
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.84
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.77
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.76
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.74
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.72
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.71
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.7
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.68
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.67
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.64
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.64
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.61
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.6
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.59
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.58
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.56
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.56
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.5
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.48
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.46
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.44
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.44
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.42
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.4
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.4
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.4
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.36
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.3
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.3
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.29
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.28
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	98.22
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.2
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.19
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.18
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.16
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.16
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	98.13
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.05
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	98.04
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	98.03
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.03
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	98.0
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.97
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.96
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.95
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.94
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.9
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.87
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.82
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.81
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.8
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.79
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.78
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.78
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.76
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.75
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.71
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.68
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.61
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.61
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.6
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.6
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.59
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.56
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.54
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.52
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.51
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.51
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.5
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.5
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	97.5
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.49
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.47
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.47
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.45
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.45
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.44
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	97.44
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.44
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.42
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.42
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.4
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.4
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.4
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.39
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.38
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.37
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.37
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	97.36
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.36
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.36
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.35
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	97.35
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.34
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.32
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.29
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.29
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.26
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.23
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.22
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	97.22
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.21
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.21
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.2
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	97.19
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.18
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	97.16
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.16
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.16
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.16
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.14
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.12
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.09
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.08
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.06
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.0
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	97.0
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.93
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.92
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.89
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.86
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.83
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.81
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.79
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.76
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.74
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.73
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.73
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.68
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.66
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.65
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.58
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	96.58
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.56
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.55
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.49
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.49
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.48
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.48
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.47
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.44
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.41
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.4
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.4
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	96.36
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.34
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.34
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.34
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.31
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.3
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.27
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.26
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.26
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.24
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.23
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	96.22
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	96.21
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.14
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.12
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.08
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.07
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.07
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.03
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.02
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.01
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.96
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	95.93
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.92
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	95.9
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	95.88
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.82
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.79
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.77
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.75
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	95.62
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.61
1lnq_A	336	MTHK channels, potassium channel related protein;	95.6

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=2.1e-36  Score=240.70  Aligned_cols=145  Identities=27%  Similarity=0.341  Sum_probs=134.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++++|++++++.++.++++.++
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            567999999999999999999999999999999999999999999999876  567889999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||+... ..++.+.++|+|+++|++|+.|+|+++|+++|+|++++.|+|||+||++|.
T Consensus        82 ~G--~iDiLVNNAGi~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~  148 (254)
T 4fn4_A           82 YS--RIDVLCNNAGIMDG-VTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGI  148 (254)
T ss_dssp             HS--CCCEEEECCCCCCT-TCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             cC--CCCEEEECCcccCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhc
Confidence            98  69999999998654 234889999999999999999999999999999999999999999999985

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.8e-35  Score=235.56  Aligned_cols=145  Identities=27%  Similarity=0.438  Sum_probs=133.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.+...+++|++++.+.++.++++.+
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSKLDA   82 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            3677999999999999999999999999999999999999999999999876  56788899999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS~ag~  209 (210)
                      +++  ++|+||||||+....+  +.+.++|+|++++++|+.|+|+++|+++|+|+++ +.|+|||+||.+|.
T Consensus        83 ~~G--~iDiLVNNAG~~~~~~--~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~  150 (255)
T 4g81_D           83 EGI--HVDILINNAGIQYRKP--MVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQ  150 (255)
T ss_dssp             TTC--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             HCC--CCcEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhc
Confidence            887  6999999999987654  8899999999999999999999999999999765 56999999999875

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=2.2e-33  Score=225.40  Aligned_cols=139  Identities=24%  Similarity=0.269  Sum_probs=126.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.+...+++|++++.+.++.++++.++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~~  100 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKAE  100 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999999998887776     456778899999999999989999999


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.++|+|+++|++|+.|+++++|+++|+|++  .|+|||+||.+|.
T Consensus       101 ~G--~iDiLVNNAG~~~~~~--~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~  164 (273)
T 4fgs_A          101 AG--RIDVLFVNAGGGSMLP--LGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGS  164 (273)
T ss_dssp             HS--CEEEEEECCCCCCCCC--TTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGG
T ss_pred             cC--CCCEEEECCCCCCCCC--hhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhc
Confidence            98  6999999999876644  889999999999999999999999999999954  5899999999875

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=6.6e-33  Score=219.14  Aligned_cols=138  Identities=25%  Similarity=0.391  Sum_probs=119.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++++||+++||||++|||+++|+.|+++|++|++++|+.+  ++..+++++.  +.+...+++|++++...++.++    
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~----   76 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD--GGNASALLIDFADPLAAKDSFT----   76 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT--TCCEEEEECCTTSTTTTTTSST----
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHH----
Confidence            5678999999999999999999999999999999999864  3555666665  5678899999999866655432    


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                         ..++|+||||||+....+  +.++++|+|+++|++|+.|+|+++|+++|+|++++ .|+|||+||++|.
T Consensus        77 ---~g~iDiLVNNAGi~~~~~--~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~  143 (247)
T 4hp8_A           77 ---DAGFDILVNNAGIIRRAD--SVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSF  143 (247)
T ss_dssp             ---TTCCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             ---hCCCCEEEECCCCCCCCC--cccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhC
Confidence               237999999999987654  88999999999999999999999999999998875 6999999999875

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.1e-32  Score=218.52  Aligned_cols=136  Identities=18%  Similarity=0.271  Sum_probs=122.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +|+++||||++|||+++|++|+++|++|++++|+++++++..++      ..+...+++|++++.+.++.++++.++++ 
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g-   74 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE------RPNLFYFHGDVADPLTLKKFVEYAMEKLQ-   74 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT------CTTEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh------cCCEEEEEecCCCHHHHHHHHHHHHHHcC-
Confidence            58999999999999999999999999999999998877654432      45678899999999999999999999998 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|+||||||.....+  +.+.+.|+|+++|++|+.|+++++|+++|+|++++ |+|||+||.+|.
T Consensus        75 -~iDiLVNNAG~~~~~~--~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~  137 (247)
T 3ged_A           75 -RIDVLVNNACRGSKGI--LSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAF  137 (247)
T ss_dssp             -CCCEEEECCCCCCCCG--GGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGT
T ss_pred             -CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccc
Confidence             6999999999877654  88999999999999999999999999999998765 999999999875

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=2e-32  Score=218.53  Aligned_cols=143  Identities=17%  Similarity=0.255  Sum_probs=124.9

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      +++++||+++||||++|||+++|++|+++|++|++++|++++.+ ..+++.+.  +.+..++++|++++.+.++.++++.
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~   78 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQR--QPRATYLPVELQDDAQCRDAVAQTI   78 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhc--CCCEEEEEeecCCHHHHHHHHHHHH
Confidence            46788999999999999999999999999999999999987754 34556555  4567889999999999999899999


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++++  ++|+||||||+....   ..+.++|+|++++++|+.|+++++|+++|+|+++ +|+|||+||++|.
T Consensus        79 ~~~G--~iDiLVNnAGi~~~~---~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~  144 (258)
T 4gkb_A           79 ATFG--RLDGLVNNAGVNDGI---GLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAV  144 (258)
T ss_dssp             HHHS--CCCEEEECCCCCCCC---CTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHH
T ss_pred             HHhC--CCCEEEECCCCCCCC---CccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhc
Confidence            9998  699999999986543   3478999999999999999999999999999765 4999999999874

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.98  E-value=3.4e-32  Score=217.70  Aligned_cols=137  Identities=22%  Similarity=0.314  Sum_probs=121.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++++||+++||||++|||+++|++|+++|++|++++|++++.            ..+...+++|++++++.++.++++.+
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~   74 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATRQ   74 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999986421            12334678999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +++  ++|+||||||+......++.+.++|+|++++++|+.|+++++|+++|+|++++.|+|||+||.++.
T Consensus        75 ~~G--~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~  143 (261)
T 4h15_A           75 RLG--GVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRV  143 (261)
T ss_dssp             HTS--SCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HcC--CCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhc
Confidence            888  699999999987654456889999999999999999999999999999999999999999999875

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.97  E-value=5.2e-31  Score=211.30  Aligned_cols=147  Identities=20%  Similarity=0.299  Sum_probs=134.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+..++.++.++.+|++++.+.++.++++.+
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            45679999999999999999999999999999999999999999999998766566789999999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        84 ~~g--~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  150 (265)
T 3lf2_A           84 TLG--CASILVNNAGQGRVST--FAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLAS  150 (265)
T ss_dssp             HHC--SCSEEEECCCCCCCBC--TTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGT
T ss_pred             HcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccC
Confidence            887  6999999999876544  789999999999999999999999999999999889999999999875

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.97  E-value=9.4e-31  Score=208.88  Aligned_cols=146  Identities=25%  Similarity=0.325  Sum_probs=132.4

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      .+++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++.++++|++++.+.++.++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   83 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAA   83 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            345677999999999999999999999999999999999999999998888775  567888999999998888888888


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+.++  ++|+||||||.....+  + +.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        84 ~~~~g--~id~lv~nAg~~~~~~--~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  151 (256)
T 3gaf_A           84 LDQFG--KITVLVNNAGGGGPKP--F-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGE  151 (256)
T ss_dssp             HHHHS--CCCEEEECCCCCCCCC--T-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred             HHHcC--CCCEEEECCCCCCCCC--C-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHc
Confidence            88887  6999999999876644  5 8899999999999999999999999999999989999999999875

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.97  E-value=1.2e-30  Score=209.00  Aligned_cols=147  Identities=19%  Similarity=0.261  Sum_probs=133.2

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ..++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.. ..++.++++|++++.+.++.++++.
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            346779999999999999999999999999999999999999999988887653 3678899999999988888888888


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++.
T Consensus        84 ~~~g--~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~  151 (262)
T 3pk0_A           84 EEFG--GIDVVCANAGVFPDAP--LATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGP  151 (262)
T ss_dssp             HHHS--CCSEEEECCCCCCCCC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTT
T ss_pred             HHhC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc
Confidence            8887  6999999999876544  789999999999999999999999999999999889999999998874

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.97  E-value=9.2e-31  Score=208.51  Aligned_cols=144  Identities=21%  Similarity=0.234  Sum_probs=130.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++++|++++.+.++.++++.+
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            3456999999999999999999999999999999999999999999998876  56889999999999888888888877


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      . +  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        81 ~-g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  146 (252)
T 3h7a_A           81 H-A--PLEVTIFNVGANVNFP--ILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASL  146 (252)
T ss_dssp             H-S--CEEEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT
T ss_pred             h-C--CceEEEECCCcCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHc
Confidence            7 5  7999999999977544  778999999999999999999999999999999888999999999875

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.97  E-value=1.9e-31  Score=210.25  Aligned_cols=130  Identities=25%  Similarity=0.373  Sum_probs=111.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.||+++||||++|||+++|++|+++|++|++++|+++++++.        ...++..+++|++++    +.++++.+++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~----~~v~~~~~~~   76 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--------RHPRIRREELDITDS----QRLQRLFEAL   76 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--------CCTTEEEEECCTTCH----HHHHHHHHHC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--------hcCCeEEEEecCCCH----HHHHHHHHhc
Confidence            4699999999999999999999999999999999998765431        145778888998876    4456666677


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||+..+    +.+.+.|+|+++|++|+.|+++++|+++|+|+++ +|+|||+||++|.
T Consensus        77 g--~iDiLVNNAGi~~~----~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~  138 (242)
T 4b79_A           77 P--RLDVLVNNAGISRD----REEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYST  138 (242)
T ss_dssp             S--CCSEEEECCCCCCG----GGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGT
T ss_pred             C--CCCEEEECCCCCCC----cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeecccc
Confidence            6  69999999998643    5688999999999999999999999999988765 5999999999885

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.97  E-value=1.4e-30  Score=208.93  Aligned_cols=142  Identities=30%  Similarity=0.415  Sum_probs=130.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+|+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++.+|++++.+.++.++++.+.++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999999999999999998775  56788899999999888888888888887


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                        ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        81 --~iD~lVnnAG~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~  144 (264)
T 3tfo_A           81 --RIDVLVNNAGVMPLSP--LAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGAL  144 (264)
T ss_dssp             --CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             --CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHc
Confidence              6999999999876544  789999999999999999999999999999999889999999999875

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.97  E-value=2.4e-30  Score=205.84  Aligned_cols=145  Identities=27%  Similarity=0.388  Sum_probs=128.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCC-ceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPN-TQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+..++ .++.++++|++++.+.++.++++.+
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            456999999999999999999999999999999999999999999999876544 6788999999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||.....+  + +.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        84 ~~g--~iD~lvnnAg~~~~~~--~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  149 (250)
T 3nyw_A           84 KYG--AVDILVNAAAMFMDGS--L-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAK  149 (250)
T ss_dssp             HHC--CEEEEEECCCCCCCCC--C-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC----
T ss_pred             hcC--CCCEEEECCCcCCCCC--C-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhc
Confidence            887  6999999999976544  5 7789999999999999999999999999999889999999999875

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.97  E-value=5.3e-30  Score=204.00  Aligned_cols=149  Identities=25%  Similarity=0.359  Sum_probs=129.4

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEec--ccCccchhhHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDF--SCDVVSAGNIK  134 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~--~~~~~~~~~~~  134 (210)
                      ....++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.. ..+..++.+|+  +++.+.++.++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   84 (252)
T 3f1l_A            6 KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-GRQPQWFILDLLTCTSENCQQLAQ   84 (252)
T ss_dssp             CTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCceEEEEecccCCHHHHHHHHH
Confidence            3445779999999999999999999999999999999999999999988887653 34677888999  77767777777


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          135 AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++.+.++  ++|+||||||..... .++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++.
T Consensus        85 ~~~~~~g--~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~  156 (252)
T 3f1l_A           85 RIAVNYP--RLDGVLHNAGLLGDV-CPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGR  156 (252)
T ss_dssp             HHHHHCS--CCSEEEECCCCCCCC-SCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGT
T ss_pred             HHHHhCC--CCCEEEECCccCCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhc
Confidence            7777776  699999999985432 34778999999999999999999999999999999989999999999875

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.97  E-value=4.9e-30  Score=205.79  Aligned_cols=146  Identities=30%  Similarity=0.434  Sum_probs=132.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.. +.++.++++|++++.+.++.++++.+
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            45779999999999999999999999999999999999999999888887632 56788999999999999988899988


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.
T Consensus        95 ~~g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  162 (266)
T 4egf_A           95 AFG--GLDVLVNNAGISHPQP--VVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAAL  162 (266)
T ss_dssp             HHT--SCSEEEEECCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             HcC--CCCEEEECCCcCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhc
Confidence            887  6999999999987644  77899999999999999999999999999998876 6899999999875

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.97  E-value=2.5e-30  Score=207.98  Aligned_cols=145  Identities=26%  Similarity=0.358  Sum_probs=131.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.+...+.+|++++.+.++.++++.+
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVESTLK  101 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            3467999999999999999999999999999999999999999998888776  45678889999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus       102 ~~g--~iD~lvnnAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  168 (270)
T 3ftp_A          102 EFG--ALNVLVNNAGITQDQL--AMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGS  168 (270)
T ss_dssp             HHS--CCCEEEECCCCCCCBC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhC
Confidence            887  6999999999876644  778999999999999999999999999999999889999999998763

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.97  E-value=5.9e-30  Score=206.70  Aligned_cols=145  Identities=25%  Similarity=0.385  Sum_probs=129.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------------hhHHHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN------------HNKLEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~------------~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      .+++||+++||||++|||+++|++|+++|++|++++|+            .+++++..++++..  +.++.++++|++++
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVKDR   83 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCCCH
Confidence            35679999999999999999999999999999999997            56677777777664  56788999999999


Q ss_pred             ccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      .+.++.++++.+.++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.
T Consensus        84 ~~v~~~~~~~~~~~g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~  159 (281)
T 3s55_A           84 AALESFVAEAEDTLG--GIDIAITNAGISTIAL--LPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSM  159 (281)
T ss_dssp             HHHHHHHHHHHHHHT--CCCEEEECCCCCCCCC--TTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             HHHHHHHHHHHHhcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCh
Confidence            888888888888887  6999999999876644  779999999999999999999999999999999889999999999


Q ss_pred             ccc
Q 045749          207 AAI  209 (210)
Q Consensus       207 ag~  209 (210)
                      ++.
T Consensus       160 ~~~  162 (281)
T 3s55_A          160 LGH  162 (281)
T ss_dssp             GGG
T ss_pred             hhc
Confidence            875

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.97  E-value=2.2e-30  Score=208.49  Aligned_cols=145  Identities=24%  Similarity=0.435  Sum_probs=131.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++.++++|++++.+.++.++++.+
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4577999999999999999999999999999999999999999999998775  45788889999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus       100 ~~g--~iD~lv~nAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~  166 (271)
T 4ibo_A          100 QGI--DVDILVNNAGIQFRKP--MIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSE  166 (271)
T ss_dssp             HTC--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HCC--CCCEEEECCCCCCCCC--chhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhC
Confidence            877  6999999999876644  778999999999999999999999999999999888999999998875

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.97  E-value=2.8e-30  Score=205.19  Aligned_cols=142  Identities=34%  Similarity=0.511  Sum_probs=127.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++..     +...+++|++++.+.++.++++.+
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~~   79 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-----NGKGMALNVTNPESIEAVLKAITD   79 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG-----GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-----cceEEEEeCCCHHHHHHHHHHHHH
Confidence            356799999999999999999999999999999999999998888777633     467788999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        80 ~~g--~iD~lv~nAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~  146 (248)
T 3op4_A           80 EFG--GVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGT  146 (248)
T ss_dssp             HHC--CCSEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HcC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhc
Confidence            887  6999999999876644  788999999999999999999999999999999889999999998763

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.97  E-value=8.2e-30  Score=204.42  Aligned_cols=148  Identities=25%  Similarity=0.298  Sum_probs=130.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+..++.++.++.+|++++++.++.++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999999999988888887765456788899999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||..... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        89 ~~g--~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  156 (267)
T 1iy8_A           89 RFG--RIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGI  156 (267)
T ss_dssp             HHS--CCSEEEECCCCCCCC-BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             HcC--CCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhc
Confidence            887  699999999986541 23678899999999999999999999999999998888999999998874

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.97  E-value=5.5e-30  Score=206.34  Aligned_cols=145  Identities=19%  Similarity=0.283  Sum_probs=129.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH-------HHHHHHHHHhhCCCceeEEEEEecccCccchh
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK-------LEKISNEIQAENPNTQINIVEYDFSCDVVSAG  131 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~-------l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~  131 (210)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.++       +++..++++..  +.++.++++|++++.+.++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRA   79 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHH
Confidence            45679999999999999999999999999999999998753       66667777665  5688999999999988888


Q ss_pred             hHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          132 NIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       132 ~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++++.+.++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++.
T Consensus        80 ~~~~~~~~~g--~iD~lvnnAG~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~  153 (274)
T 3e03_A           80 AVAATVDTFG--GIDILVNNASAIWLRG--TLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSL  153 (274)
T ss_dssp             HHHHHHHHHS--CCCEEEECCCCCCCCC--GGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCC
T ss_pred             HHHHHHHHcC--CCCEEEECCCcccCCC--cccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhc
Confidence            8888888887  6999999999976644  778999999999999999999999999999999889999999998875

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.97  E-value=3.2e-30  Score=208.87  Aligned_cols=147  Identities=20%  Similarity=0.277  Sum_probs=130.2

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh-------HHHHHHHHHHhhCCCceeEEEEEecccCccc
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN-------KLEKISNEIQAENPNTQINIVEYDFSCDVVS  129 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~-------~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~  129 (210)
                      ..++++||+++||||++|||+++|++|+++|++|++++|+++       .+++..++++..  +.++.++++|++++.+.
T Consensus         3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v   80 (285)
T 3sc4_A            3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAV   80 (285)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHH
Confidence            345677999999999999999999999999999999999976       567777777766  56889999999999888


Q ss_pred             hhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          130 AGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       130 ~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++.++++.+.++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++.
T Consensus        81 ~~~~~~~~~~~g--~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~  156 (285)
T 3sc4_A           81 AAAVAKTVEQFG--GIDICVNNASAINLGS--IEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRL  156 (285)
T ss_dssp             HHHHHHHHHHHS--CCSEEEECCCCCCCCC--TTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCC
T ss_pred             HHHHHHHHHHcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhc
Confidence            888888888887  6999999999986544  789999999999999999999999999999999889999999998764

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.97  E-value=5.7e-30  Score=207.27  Aligned_cols=146  Identities=26%  Similarity=0.373  Sum_probs=129.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++.++++|++++.+.++.++++.+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4466999999999999999999999999999999999999999998888654  56788999999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||+... ..++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus       102 ~~g--~iD~lVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~  169 (283)
T 3v8b_A          102 KFG--HLDIVVANAGINGV-WAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGT  169 (283)
T ss_dssp             HHS--CCCEEEECCCCCCC-BCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT
T ss_pred             HhC--CCCEEEECCCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhc
Confidence            887  69999999998644 134778999999999999999999999999999999889999999998874

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=3.3e-30  Score=209.05  Aligned_cols=147  Identities=28%  Similarity=0.403  Sum_probs=131.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL---NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~---~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ++.||+++||||++|||+++|++|+++|+   +|++++|++++++++.+++....++.++.++++|++++++.++.++++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            35799999999999999999999999998   999999999999999999988776788999999999998777777777


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+.++  ++|+||||||.... ..++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus       110 ~~~~g--~iD~lVnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~  179 (287)
T 3rku_A          110 PQEFK--DIDILVNNAGKALG-SDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR  179 (287)
T ss_dssp             CGGGC--SCCEEEECCCCCCC-CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             HHhcC--CCCEEEECCCcCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhc
Confidence            76666  69999999998753 234778999999999999999999999999999999889999999999875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.97  E-value=1e-29  Score=204.94  Aligned_cols=144  Identities=24%  Similarity=0.361  Sum_probs=129.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-------------ChhHHHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-------------NHNKLEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-------------~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|             +.+++++..++++..  +.++.++.+|++++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   85 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDTRDF   85 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCH
Confidence            467999999999999999999999999999999998             677788887777665  56788999999999


Q ss_pred             ccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecc
Q 045749          127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGS  205 (210)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS  205 (210)
                      .+.++.++++.+.++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||
T Consensus        86 ~~v~~~~~~~~~~~g--~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS  161 (277)
T 3tsc_A           86 DRLRKVVDDGVAALG--RLDIIVANAGVAAPQA--WDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISS  161 (277)
T ss_dssp             HHHHHHHHHHHHHHS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             HHHHHHHHHHHHHcC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence            888888888888887  6999999999986644  77999999999999999999999999999998876 689999999


Q ss_pred             cccc
Q 045749          206 GAAI  209 (210)
Q Consensus       206 ~ag~  209 (210)
                      .++.
T Consensus       162 ~~~~  165 (277)
T 3tsc_A          162 AAGM  165 (277)
T ss_dssp             GGGT
T ss_pred             HhhC
Confidence            9875

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.97  E-value=8.8e-30  Score=204.85  Aligned_cols=144  Identities=24%  Similarity=0.304  Sum_probs=129.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.+..++.+|++++.+.++.++++.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFTID   81 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999999999988877766     45677889999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||........+.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        82 ~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~  150 (271)
T 3tzq_B           82 TFG--RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAH  150 (271)
T ss_dssp             HHS--CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred             HcC--CCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHc
Confidence            887  699999999987543445778999999999999999999999999999999999999999999875

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.97  E-value=1.1e-29  Score=204.93  Aligned_cols=143  Identities=26%  Similarity=0.369  Sum_probs=128.6

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+++|++++.+.++.++++.
T Consensus        22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (277)
T 4dqx_A           22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSAKDAESMVEKTT   96 (277)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999999999888877664     4567889999999988888888888


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        97 ~~~g--~iD~lv~nAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  164 (277)
T 4dqx_A           97 AKWG--RVDVLVNNAGFGTTGN--VVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTAT  164 (277)
T ss_dssp             HHHS--CCCEEEECCCCCCCBC--TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGT
T ss_pred             HHcC--CCCEEEECCCcCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhC
Confidence            8887  6999999999876544  778999999999999999999999999999999888999999999875

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.97  E-value=1.3e-29  Score=203.31  Aligned_cols=144  Identities=31%  Similarity=0.561  Sum_probs=127.8

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+++..+..+.+|++++    +.++++.
T Consensus         5 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~----~~~~~~~   80 (267)
T 3t4x_A            5 HMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE----QGCQDVI   80 (267)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSH----HHHHHHH
T ss_pred             ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCH----HHHHHHH
Confidence            345679999999999999999999999999999999999999999999998887677888888888776    4455566


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++.
T Consensus        81 ~~~g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  148 (267)
T 3t4x_A           81 EKYP--KVDILINNLGIFEPVE--YFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAI  148 (267)
T ss_dssp             HHCC--CCSEEEECCCCCCCCC--GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGT
T ss_pred             HhcC--CCCEEEECCCCCCCCc--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhc
Confidence            6665  6999999999986644  778999999999999999999999999999999989999999999875

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.97  E-value=1.7e-29  Score=200.53  Aligned_cols=142  Identities=30%  Similarity=0.489  Sum_probs=127.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.||+++||||++|||+++|++|+++|++|++++|+++++++..++++..  +.++.++.+|++++.+.++.++++.+.+
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999999999888888764  4578889999999988888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++ |+||++||.++.
T Consensus        83 g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~  146 (247)
T 2jah_A           83 G--GLDILVNNAGIMLLGP--VEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGR  146 (247)
T ss_dssp             S--CCSEEEECCCCCCCCC--STTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGT
T ss_pred             C--CCCEEEECCCCCCCCc--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhc
Confidence            7  6999999999875543  77899999999999999999999999999998887 999999999875

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.97  E-value=1.1e-29  Score=205.25  Aligned_cols=149  Identities=27%  Similarity=0.326  Sum_probs=131.0

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      +++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++... ..++.++++|++++.+.++.++++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A            6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            4567799999999999999999999999999999999999999999999877532 237889999999998888888888


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+.++  ++|+||||||.... ..++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        86 ~~~~g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  155 (281)
T 3svt_A           86 TAWHG--RLHGVVHCAGGSEN-IGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAAS  155 (281)
T ss_dssp             HHHHS--CCCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHH
T ss_pred             HHHcC--CCCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHc
Confidence            88887  69999999998433 234778999999999999999999999999999999989999999998764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.97  E-value=8.4e-30  Score=206.07  Aligned_cols=148  Identities=26%  Similarity=0.398  Sum_probs=126.9

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      +.++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.. +..+.++++|++++.+.++.++++.
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~  106 (281)
T 4dry_A           28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVGDPDQVAALFAAVR  106 (281)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            345679999999999999999999999999999999999999999988887653 3345889999999988888888888


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC--CCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK--KGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~--~g~iv~isS~ag~  209 (210)
                      +.++  ++|+||||||..... .++.+.+.++|++++++|+.|+++++++++|.|++++  .|+||++||.++.
T Consensus       107 ~~~g--~iD~lvnnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  177 (281)
T 4dry_A          107 AEFA--RLDLLVNNAGSNVPP-VPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ  177 (281)
T ss_dssp             HHHS--CCSEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGT
T ss_pred             HHcC--CCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhC
Confidence            8887  699999999986541 3377899999999999999999999999999999875  6899999999875

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.97  E-value=1.2e-29  Score=204.92  Aligned_cols=144  Identities=24%  Similarity=0.357  Sum_probs=129.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-------------ChhHHHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-------------NHNKLEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-------------~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|             +++++++..++++..  +.++.++++|++++
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~   89 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLDVRDD   89 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTTCH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcCCCCH
Confidence            467999999999999999999999999999999998             677888888887765  56788999999999


Q ss_pred             ccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecc
Q 045749          127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGS  205 (210)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS  205 (210)
                      .+.++.++++.+.++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||
T Consensus        90 ~~v~~~~~~~~~~~g--~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (280)
T 3pgx_A           90 AALRELVADGMEQFG--RLDVVVANAGVLSWGR--VWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS  165 (280)
T ss_dssp             HHHHHHHHHHHHHHC--CCCEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             HHHHHHHHHHHHHcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence            888888888888887  6999999999986644  78899999999999999999999999999998876 799999999


Q ss_pred             cccc
Q 045749          206 GAAI  209 (210)
Q Consensus       206 ~ag~  209 (210)
                      .++.
T Consensus       166 ~~~~  169 (280)
T 3pgx_A          166 SAGL  169 (280)
T ss_dssp             GGGT
T ss_pred             hhhc
Confidence            9875

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.97  E-value=9.1e-30  Score=203.22  Aligned_cols=143  Identities=24%  Similarity=0.355  Sum_probs=128.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++.++++|++++.+.++.++++.+.+
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            56999999999999999999999999999999999999999988888654  4578899999999988888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh-CCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR-RKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~-~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++ ++.|+||++||.++.
T Consensus        82 g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  147 (257)
T 3imf_A           82 G--RIDILINNAAGNFICP--AEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAW  147 (257)
T ss_dssp             S--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGG
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhc
Confidence            7  6999999999876544  789999999999999999999999999999954 457999999998874

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.97  E-value=7.3e-30  Score=207.62  Aligned_cols=146  Identities=21%  Similarity=0.309  Sum_probs=132.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.. ..++.++++|++++.+.++.++++.+
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            45679999999999999999999999999999999999999999888886653 35788999999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus       116 ~~g--~iD~lvnnAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~  182 (293)
T 3rih_A          116 AFG--ALDVVCANAGIFPEAR--LDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGP  182 (293)
T ss_dssp             HHS--CCCEEEECCCCCCCCC--TTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTT
T ss_pred             HcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhc
Confidence            887  6999999999876544  779999999999999999999999999999999989999999998874

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.97  E-value=1e-29  Score=203.19  Aligned_cols=142  Identities=23%  Similarity=0.342  Sum_probs=129.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~-~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +||+++||||++|||+++|++|+++|++|+++ +|+++++++..+++++.  +.++.++++|++++.+.++.++++.+.+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            48999999999999999999999999999996 89999999988888765  5678899999999988888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        81 g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~  145 (258)
T 3oid_A           81 G--RLDVFVNNAASGVLRP--VMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSI  145 (258)
T ss_dssp             S--CCCEEEECCCCCCCSC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGT
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhC
Confidence            7  6999999999876544  778999999999999999999999999999999989999999999875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.97  E-value=8.6e-30  Score=204.77  Aligned_cols=145  Identities=26%  Similarity=0.377  Sum_probs=130.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ++++||+++||||++|||+++|++|+++|++|++++| +++.+++..+++++.  +.++.++++|++++.+.++.++++.
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~~~  101 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEALFAAVI  101 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999998 677788888888765  5678889999999988888888888


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus       102 ~~~g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  169 (269)
T 4dmm_A          102 ERWG--RLDVLVNNAGITRDTL--LLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGE  169 (269)
T ss_dssp             HHHS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHH
T ss_pred             HHcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhc
Confidence            8887  6999999999876644  778999999999999999999999999999999889999999998763

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.97  E-value=7e-30  Score=206.03  Aligned_cols=145  Identities=17%  Similarity=0.263  Sum_probs=130.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++++.+.++.++++.+.
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3679999999999999999999999999999999999999988888886543 467889999999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus       103 ~g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  168 (277)
T 4fc7_A          103 FG--RIDILINCAAGNFLCP--AGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGN  168 (277)
T ss_dssp             HS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHH
T ss_pred             cC--CCCEEEECCcCCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhC
Confidence            87  6999999999876544  778999999999999999999999999999998888999999998763

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.97  E-value=1.1e-29  Score=204.82  Aligned_cols=144  Identities=26%  Similarity=0.310  Sum_probs=129.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++..++++..  +.++..+.+|+++..+.++.++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDLIERAEA  106 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            4577999999999999999999999999999999999999999988888775  56788999999999888887777766


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      . +  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus       107 ~-g--~iD~lvnnAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~  172 (275)
T 4imr_A          107 I-A--PVDILVINASAQINAT--LSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQL  172 (275)
T ss_dssp             H-S--CCCEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             h-C--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhC
Confidence            5 4  7999999999876644  778999999999999999999999999999999889999999999875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.97  E-value=1.3e-29  Score=204.52  Aligned_cols=145  Identities=23%  Similarity=0.339  Sum_probs=131.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++.++++|++++.+.++.++++.+
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4577999999999999999999999999999999999999999999888765  45788899999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCC-CEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK-GAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~-g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++|+++|.|++++. |+||++||.++.
T Consensus       106 ~~g--~iD~lvnnAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~  173 (276)
T 3r1i_A          106 ELG--GIDIAVCNAGIVSVQA--MLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGH  173 (276)
T ss_dssp             HHS--CCSEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             HcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhc
Confidence            887  6999999999876644  778999999999999999999999999999988764 899999998874

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.97  E-value=1.4e-29  Score=201.38  Aligned_cols=149  Identities=28%  Similarity=0.363  Sum_probs=128.7

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ..+++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++.++.+|++++.+.++.++++
T Consensus         3 ~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   80 (253)
T 3qiv_A            3 GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRT   80 (253)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            345677999999999999999999999999999999999999999999888775  567889999999998888888888


Q ss_pred             HHHhcCCCccEEEEcCCCCCC-CcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYP-KAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+.++  ++|++|||||+... ...++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.+++
T Consensus        81 ~~~~g--~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  152 (253)
T 3qiv_A           81 LAEFG--GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW  152 (253)
T ss_dssp             HHHHS--CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----
T ss_pred             HHHcC--CCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc
Confidence            88887  69999999998532 2234668899999999999999999999999999999989999999998764

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.97  E-value=8.8e-30  Score=204.42  Aligned_cols=145  Identities=29%  Similarity=0.473  Sum_probs=124.1

Q ss_pred             CCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           56 PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        56 ~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      ....++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++++|++++.+.++.+++
T Consensus        20 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~   94 (266)
T 3grp_A           20 GSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLSDRKSIKQLAEV   94 (266)
T ss_dssp             -CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHH
T ss_pred             cchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEeecCCHHHHHHHHHH
Confidence            3345678999999999999999999999999999999999999888776654     45788999999999888888888


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.+.++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        95 ~~~~~g--~iD~lvnnAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~  164 (266)
T 3grp_A           95 AEREME--GIDILVNNAGITRDGL--FVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGV  164 (266)
T ss_dssp             HHHHHT--SCCEEEECCCCC-------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC---
T ss_pred             HHHHcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHc
Confidence            888887  6999999999876544  778899999999999999999999999999999889999999998874

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.97  E-value=2.6e-29  Score=201.72  Aligned_cols=150  Identities=22%  Similarity=0.320  Sum_probs=128.7

Q ss_pred             CCCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHH
Q 045749           55 QPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        55 ~~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      ++++.++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.. +.++.++.+|++++.+.++.++
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~   91 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLE   91 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHH
Confidence            344556789999999999999999999999999999999999999888888773322 4567888999999888888888


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc-cc
Q 045749          135 AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA-AI  209 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a-g~  209 (210)
                      ++.+.++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.+ +.
T Consensus        92 ~~~~~~g--~iD~lvnnAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  163 (267)
T 1vl8_A           92 AVKEKFG--KLDTVVNAAGINRRHP--AEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE  163 (267)
T ss_dssp             HHHHHHS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC
T ss_pred             HHHHHcC--CCCEEEECCCcCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhc
Confidence            8888887  6999999999876543  7789999999999999999999999999999888889999999987 53

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.97  E-value=1.6e-29  Score=204.46  Aligned_cols=145  Identities=23%  Similarity=0.390  Sum_probs=129.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++.+|+++||||++|||+++|++|+++|++|++++| +++++++..+++.+.. +.++.++.+|++++.+.++.++++.+
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            466999999999999999999999999999999999 6677888888876543 46788899999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus       101 ~~g--~iD~lv~nAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  167 (281)
T 3v2h_A          101 RFG--GADILVNNAGVQFVEK--IEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGL  167 (281)
T ss_dssp             HTS--SCSEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HCC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccc
Confidence            887  6999999999876544  778999999999999999999999999999999989999999999875

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.97  E-value=3.2e-29  Score=200.26  Aligned_cols=145  Identities=21%  Similarity=0.315  Sum_probs=129.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++.||+++||||++|||+++|++|+++|++|++++|+++++++..++++..  +.++.++.+|++++.+.++.++++.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVAN   82 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999999999998888888664  45788899999998888887788877


Q ss_pred             Hh-cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AI-DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~-~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+ +  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        83 ~~~g--~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  150 (260)
T 2ae2_A           83 HFHG--KLNILVNNAGIVIYKE--AKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA  150 (260)
T ss_dssp             HTTT--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGT
T ss_pred             HcCC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc
Confidence            77 5  6999999999875543  678899999999999999999999999999998888999999998774

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.97  E-value=1.8e-29  Score=203.77  Aligned_cols=141  Identities=26%  Similarity=0.339  Sum_probs=127.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++++|++++.+.++.++++.+.
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVAA  100 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999999888877766     456788999999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus       101 ~g--~iD~lvnnAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~  166 (277)
T 3gvc_A          101 FG--GVDKLVANAGVVHLAS--LIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQ  166 (277)
T ss_dssp             HS--SCCEEEECCCCCCCBC--TTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred             cC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc
Confidence            87  6999999999986544  778999999999999999999999999999999999999999999875

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.97  E-value=9.7e-30  Score=201.98  Aligned_cols=141  Identities=30%  Similarity=0.398  Sum_probs=126.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+++|++++.+.++.++++.+.
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQAL   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            356999999999999999999999999999999999999888877766     456788899999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.
T Consensus        78 ~g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  144 (247)
T 3rwb_A           78 TG--GIDILVNNASIVPFVA--WDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFF  144 (247)
T ss_dssp             HS--CCSEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHH
T ss_pred             CC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhc
Confidence            87  6999999999876544  78999999999999999999999999999998876 6999999998763

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.97  E-value=2.6e-29  Score=203.36  Aligned_cols=146  Identities=23%  Similarity=0.355  Sum_probs=128.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC----------------hhHHHHHHHHHHhhCCCceeEEEEEe
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN----------------HNKLEKISNEIQAENPNTQINIVEYD  122 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~----------------~~~l~~~~~~l~~~~~~~~~~~~~~D  122 (210)
                      .++.||+++||||++|||+++|++|+++|++|++++|+                ++++++..++++..  +.++.++++|
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D   84 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAEVD   84 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEECC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEEcC
Confidence            35679999999999999999999999999999999987                67777777777654  5678899999


Q ss_pred             cccCccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEE
Q 045749          123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIV  201 (210)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv  201 (210)
                      ++++.+.++.++++.+.++  ++|+||||||+.... .++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||
T Consensus        85 v~~~~~v~~~~~~~~~~~g--~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv  161 (286)
T 3uve_A           85 VRDYDALKAAVDSGVEQLG--RLDIIVANAGIGNGG-DTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSII  161 (286)
T ss_dssp             TTCHHHHHHHHHHHHHHHS--CCCEEEECCCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             CCCHHHHHHHHHHHHHHhC--CCCEEEECCcccCCC-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEE
Confidence            9999888888888888887  699999999987653 2367889999999999999999999999999998876 68999


Q ss_pred             Eecccccc
Q 045749          202 NIGSGAAI  209 (210)
Q Consensus       202 ~isS~ag~  209 (210)
                      ++||.++.
T Consensus       162 ~isS~~~~  169 (286)
T 3uve_A          162 LTSSVGGL  169 (286)
T ss_dssp             EECCGGGT
T ss_pred             EECchhhc
Confidence            99999875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.97  E-value=1.8e-29  Score=203.88  Aligned_cols=143  Identities=27%  Similarity=0.409  Sum_probs=128.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++.++.+|++++.+.++.++++.+.+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999999888765  5678899999999988888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHH--HhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLT--GMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~--~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|  .|++++.|+||++||.++.
T Consensus       100 g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~  166 (279)
T 3sju_A          100 G--PIGILVNSAGRNGGGE--TADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGK  166 (279)
T ss_dssp             C--SCCEEEECCCCCCCSC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGT
T ss_pred             C--CCcEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhc
Confidence            7  6999999999876644  77899999999999999999999999999  6888888999999999875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.97  E-value=3.2e-29  Score=201.75  Aligned_cols=146  Identities=21%  Similarity=0.323  Sum_probs=129.7

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++..+.+|++++.+.++.++++.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   93 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVA   93 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHH
Confidence            34577999999999999999999999999999999999999998888888764  4567889999999888888778887


Q ss_pred             HHh-cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAI-DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~-~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.+ +  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        94 ~~~~g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~  162 (273)
T 1ae1_A           94 HVFDG--KLNILVNNAGVVIHKE--AKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGF  162 (273)
T ss_dssp             HHTTS--CCCEEEECCCCCCCCC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGT
T ss_pred             HHcCC--CCcEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhc
Confidence            777 5  6999999999875543  778999999999999999999999999999998888999999999875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.97  E-value=3.2e-29  Score=202.51  Aligned_cols=146  Identities=25%  Similarity=0.374  Sum_probs=124.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++.+|+++||||++|||+++|++|+++|++|++++| +++++++..+++...  +.++.++++|++++.+.++.++++.+
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  103 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADLSSHQATVDAVVA  103 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999995 778888888888765  56788999999999999998899988


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC---CCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK---KGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~---~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||.......++.+.+.++|++++++|+.|+++++++++|.|++++   .|+||++||.++.
T Consensus       104 ~~g--~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~  175 (280)
T 4da9_A          104 EFG--RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAV  175 (280)
T ss_dssp             HHS--CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC---
T ss_pred             HcC--CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhc
Confidence            887  69999999998533234478999999999999999999999999999998866   7899999998874

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.97  E-value=4.5e-29  Score=203.39  Aligned_cols=146  Identities=23%  Similarity=0.333  Sum_probs=129.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------------hhHHHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN------------HNKLEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~------------~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      .++.||+++||||++|||+++|++|+++|++|++++|+            .+++++..++++..  +.++.++++|++++
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~  101 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL--GRRIIASQVDVRDF  101 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc--CCceEEEECCCCCH
Confidence            34779999999999999999999999999999999987            77788888888765  56788999999999


Q ss_pred             ccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecc
Q 045749          127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGS  205 (210)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS  205 (210)
                      .+.++.++++.+.++  ++|+||||||+.... .++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||
T Consensus       102 ~~v~~~~~~~~~~~g--~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS  178 (299)
T 3t7c_A          102 DAMQAAVDDGVTQLG--RLDIVLANAALASEG-TRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSS  178 (299)
T ss_dssp             HHHHHHHHHHHHHHS--CCCEEEECCCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECC
T ss_pred             HHHHHHHHHHHHHhC--CCCEEEECCCCCCCC-CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence            888888888888887  699999999987653 2367899999999999999999999999999988765 789999999


Q ss_pred             cccc
Q 045749          206 GAAI  209 (210)
Q Consensus       206 ~ag~  209 (210)
                      .++.
T Consensus       179 ~~~~  182 (299)
T 3t7c_A          179 IGGL  182 (299)
T ss_dssp             GGGT
T ss_pred             hhhc
Confidence            9875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.97  E-value=1.3e-29  Score=204.89  Aligned_cols=145  Identities=19%  Similarity=0.274  Sum_probs=129.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++.+|++++.+.++.++++.+.
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            356999999999999999999999999999999999999999988888654  567888999999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||+... ..++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        83 ~g--~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  149 (280)
T 3tox_A           83 FG--GLDTAFNNAGALGA-MGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGH  149 (280)
T ss_dssp             HS--CCCEEEECCCCCCS-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTT
T ss_pred             cC--CCCEEEECCCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhC
Confidence            87  69999999998643 234778999999999999999999999999999999999999999998874

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.97  E-value=3.4e-29  Score=204.36  Aligned_cols=143  Identities=22%  Similarity=0.316  Sum_probs=130.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.||+++||||++|||+++|++|+++|++|++++|+++++++..++++..  +.++.++.+|++++.+.++.++++.+.+
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            67999999999999999999999999999999999999999999988775  5678899999999988888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.
T Consensus       107 g--~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  172 (301)
T 3tjr_A          107 G--GVDVVFSNAGIVVAGP--LAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGL  172 (301)
T ss_dssp             S--SCSEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             C--CCCEEEECCCcCCCCC--cccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc
Confidence            7  6999999999986644  77899999999999999999999999999998877 7899999999875

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.96  E-value=2.3e-29  Score=199.60  Aligned_cols=142  Identities=30%  Similarity=0.460  Sum_probs=127.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+|+++||||++|||+++|++|+++|++|++++| +++++++..+++++.  +.++.++++|++++.+.++.++++.+.+
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4899999999999999999999999999999887 567788888888765  5678889999999988888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        81 g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  145 (246)
T 3osu_A           81 G--SLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGA  145 (246)
T ss_dssp             S--CCCEEEECCCCCCCCC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             C--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhc
Confidence            7  6999999999876644  778999999999999999999999999999999889999999998763

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.96  E-value=4e-29  Score=200.23  Aligned_cols=144  Identities=22%  Similarity=0.285  Sum_probs=129.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++.++++|++++.+.++.++++.+.
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDETMKA   85 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            356999999999999999999999999999999999999999999988775  567889999999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.... ..++.+.+.++|++++++|+.|+++++++++|.|++++ |+||++||.++.
T Consensus        86 ~g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~  151 (264)
T 3ucx_A           86 YG--RVDVVINNAFRVPS-MKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVR  151 (264)
T ss_dssp             TS--CCSEEEECCCSCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGG
T ss_pred             cC--CCcEEEECCCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhc
Confidence            87  69999999998533 23477899999999999999999999999999998876 999999999875

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.96  E-value=6e-29  Score=198.94  Aligned_cols=145  Identities=30%  Similarity=0.423  Sum_probs=130.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++.++.+|++++.+..+.++.+.+.
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~  103 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFATGVLAA  103 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            367999999999999999999999999999999999999999998888765  567889999999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.... ..++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus       104 ~g--~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  170 (262)
T 3rkr_A          104 HG--RCDVLVNNAGVGWF-GGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGK  170 (262)
T ss_dssp             HS--CCSEEEECCCCCCC-SSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSS
T ss_pred             cC--CCCEEEECCCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhc
Confidence            87  69999999998433 133778899999999999999999999999999999989999999999875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.96  E-value=3.1e-29  Score=198.80  Aligned_cols=143  Identities=33%  Similarity=0.476  Sum_probs=127.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++||+++||||++|||+++|++|+++|++|++++| +++++++..++++..  +.++.++++|++++.+.++.++++.+.
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999999999999999 888888888888764  456788999999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        80 ~g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  145 (246)
T 2uvd_A           80 FG--QVDILVNNAGVTKDNL--LMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGV  145 (246)
T ss_dssp             HS--CCCEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH
T ss_pred             cC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhc
Confidence            87  6999999999876543  778999999999999999999999999999998888999999998763

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.96  E-value=4.6e-29  Score=199.27  Aligned_cols=141  Identities=23%  Similarity=0.345  Sum_probs=126.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.+..++++|++++++.++.++++.+.
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   79 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATVEH   79 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            356999999999999999999999999999999999999988877776     345788999999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.
T Consensus        80 ~g--~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  146 (259)
T 4e6p_A           80 AG--GLDILVNNAALFDLAP--IVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGR  146 (259)
T ss_dssp             SS--SCCEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             cC--CCCEEEECCCcCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhc
Confidence            77  6999999999876544  77899999999999999999999999999998876 7899999999875

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.96  E-value=5.7e-29  Score=204.58  Aligned_cols=146  Identities=24%  Similarity=0.378  Sum_probs=131.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++...+++.++.++.+|++++.+.++.++.+.+.
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            35699999999999999999999999999999999999999999999887755558999999999998888888888887


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC------CCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR------KKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~------~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|.|.++      +.|+||++||.+|+
T Consensus        85 ~g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~  156 (319)
T 3ioy_A           85 FG--PVSILCNNAGVNLFQP--IEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAF  156 (319)
T ss_dssp             TC--CEEEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGT
T ss_pred             CC--CCCEEEECCCcCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccc
Confidence            76  6999999999876544  7889999999999999999999999999999875      57999999999885

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.96  E-value=4.3e-29  Score=201.02  Aligned_cols=142  Identities=28%  Similarity=0.370  Sum_probs=125.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++++|++++.+.++.++++.+.
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~   99 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDVTDPDSVRALFTATVEK   99 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999988887776     356788999999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC--CCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK--KGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~--~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||...+. .++.+.+.++|++++++|+.|+++++++++|.|++++  .|+||++||.++.
T Consensus       100 ~g--~iD~lVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  168 (272)
T 4dyv_A          100 FG--RVDVLFNNAGTGAPA-IPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISAT  168 (272)
T ss_dssp             HS--CCCEEEECCCCCCCS-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTT
T ss_pred             cC--CCCEEEECCCCCCCC-CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhc
Confidence            87  699999999986542 3377899999999999999999999999999999876  6899999999875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.96  E-value=3.6e-29  Score=198.26  Aligned_cols=144  Identities=27%  Similarity=0.409  Sum_probs=129.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++.++++|++++.+.++.++++.+.
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            456999999999999999999999999999999999999999988888775  567889999999998888777777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||+....+  +.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        80 ~~--~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  145 (247)
T 3lyl_A           80 NL--AIDILVNNAGITRDNL--MMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGS  145 (247)
T ss_dssp             TC--CCSEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH
T ss_pred             cC--CCCEEEECCCCCCCCc--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc
Confidence            66  6999999999886644  778999999999999999999999999999999889999999998763

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.96  E-value=6.5e-29  Score=198.69  Aligned_cols=146  Identities=23%  Similarity=0.398  Sum_probs=129.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.. +.++.++++|++++.+.++.++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999999998888888876542 34678889999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        82 ~~g--~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  148 (263)
T 3ai3_A           82 SFG--GADILVNNAGTGSNET--IMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAV  148 (263)
T ss_dssp             HHS--SCSEEEECCCCCCCCC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhc
Confidence            887  6999999999876543  778899999999999999999999999999998888999999999875

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.96  E-value=3.4e-29  Score=199.98  Aligned_cols=146  Identities=15%  Similarity=0.174  Sum_probs=127.4

Q ss_pred             cccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           59 LKSYGSWALITGATD--GIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        59 ~~~~gk~vlITGass--GiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ++++||+++||||+|  |||+++|++|+++|++|++++|+++.++++.+++++.+ +.+..++++|++++++.++.++++
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHH
Confidence            356799999999875  99999999999999999999999999999888887653 557888999999998889989999


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCc--ccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKA--MFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+.++  ++|+||||||+....+  ..+.+.+.|+|+..+++|+.+++.+++.+.|+|.  ++|+|||+||.+|.
T Consensus        81 ~~~~G--~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~IVnisS~~~~  151 (256)
T 4fs3_A           81 GKDVG--NIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--EGGSIVATTYLGGE  151 (256)
T ss_dssp             HHHHC--CCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--TCEEEEEEECGGGT
T ss_pred             HHHhC--CCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCEEEEEeccccc
Confidence            99988  6999999999865422  2356889999999999999999999999988663  45999999999875

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.96  E-value=5.2e-29  Score=206.90  Aligned_cols=146  Identities=22%  Similarity=0.273  Sum_probs=130.3

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH-------HHHHHHHHHhhCCCceeEEEEEecccCccch
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK-------LEKISNEIQAENPNTQINIVEYDFSCDVVSA  130 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~-------l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~  130 (210)
                      ..+++||+++||||++|||+++|++|+++|++|++++|++++       +++..++++..  +.++.++.+|++++.+.+
T Consensus        40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~  117 (346)
T 3kvo_A           40 TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIVDVRDEQQIS  117 (346)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEECCTTCHHHHH
T ss_pred             CCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHH
Confidence            345779999999999999999999999999999999999764       56677777665  567889999999998888


Q ss_pred             hhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          131 GNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       131 ~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++++.+.++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus       118 ~~~~~~~~~~g--~iDilVnnAG~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~  192 (346)
T 3kvo_A          118 AAVEKAIKKFG--GIDILVNNASAISLTN--TLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNL  192 (346)
T ss_dssp             HHHHHHHHHHS--CCCEEEECCCCCCCCC--TTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCC
T ss_pred             HHHHHHHHHcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHc
Confidence            88888888887  6999999999876644  778999999999999999999999999999999888999999998864

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.96  E-value=3.6e-29  Score=197.33  Aligned_cols=138  Identities=17%  Similarity=0.154  Sum_probs=119.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+|+++||||++|||+++|++|+++|++|++++|+++++++..+++.     .++.++.+|++++.+.++.++++.+.++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-----NAVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999999999999999888877762     2588899999999888888888888887


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                        ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++ |+||++||.++.
T Consensus        77 --~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~  139 (235)
T 3l6e_A           77 --LPELVLHCAGTGEFGP--VGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQ  139 (235)
T ss_dssp             --SCSEEEEECCCC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECC
T ss_pred             --CCcEEEECCCCCCCCC--hHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhc
Confidence              6999999999876544  77899999999999999999999999999997765 699999998875

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.96  E-value=9.2e-29  Score=203.18  Aligned_cols=144  Identities=24%  Similarity=0.408  Sum_probs=128.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------------hhHHHHHHHHHHhhCCCceeEEEEEecccCc
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN------------HNKLEKISNEIQAENPNTQINIVEYDFSCDV  127 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~------------~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~  127 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|+            .+++++..+++++.  +.++.++.+|++++.
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVRDLA  120 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCHH
Confidence            4679999999999999999999999999999999886            67777777777665  567889999999998


Q ss_pred             cchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEeccc
Q 045749          128 VSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSG  206 (210)
Q Consensus       128 ~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~  206 (210)
                      +.++.++++.+.++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.
T Consensus       121 ~v~~~~~~~~~~~g--~iD~lVnnAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~  196 (317)
T 3oec_A          121 SLQAVVDEALAEFG--HIDILVSNVGISNQGE--VVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSST  196 (317)
T ss_dssp             HHHHHHHHHHHHHS--CCCEEEECCCCCCCBC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcH
Confidence            88888888888887  6999999999886644  77999999999999999999999999999998875 6899999999


Q ss_pred             ccc
Q 045749          207 AAI  209 (210)
Q Consensus       207 ag~  209 (210)
                      ++.
T Consensus       197 ~~~  199 (317)
T 3oec_A          197 VGL  199 (317)
T ss_dssp             GGS
T ss_pred             Hhc
Confidence            875

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.96  E-value=6.8e-29  Score=198.61  Aligned_cols=144  Identities=26%  Similarity=0.380  Sum_probs=127.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++.++++|++++.+.++.++++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999998888888664  456888999999998888888888888


Q ss_pred             hcCCCccEEEEcCCCC-CCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGIT-YPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.. ...  ++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        82 ~g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  148 (262)
T 1zem_A           82 FG--KIDFLFNNAGYQGAFA--PVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGV  148 (262)
T ss_dssp             HS--CCCEEEECCCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             hC--CCCEEEECCCCCCCCC--ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc
Confidence            87  699999999986 433  3778899999999999999999999999999998888999999998753

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.96  E-value=1.2e-28  Score=198.71  Aligned_cols=142  Identities=25%  Similarity=0.362  Sum_probs=124.6

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------------hhHHHHHHHHHHhhCCCceeEEEEEeccc
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN------------HNKLEKISNEIQAENPNTQINIVEYDFSC  125 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~------------~~~l~~~~~~l~~~~~~~~~~~~~~D~~~  125 (210)
                      ..++.||+++||||++|||+++|++|+++|++|++++|+            .+++++..+++...  +.++.++++|+++
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   85 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVRD   85 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTTC
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCCC
Confidence            345679999999999999999999999999999999987            77778777777665  5678899999999


Q ss_pred             CccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                      +.+.++.++++.+.++  ++|+||||||+....      .+.++|++++++|+.|+++++++++|+|++++ .|+||++|
T Consensus        86 ~~~v~~~~~~~~~~~g--~id~lv~nAg~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~is  157 (278)
T 3sx2_A           86 RESLSAALQAGLDELG--RLDIVVANAGIAPMS------AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLIS  157 (278)
T ss_dssp             HHHHHHHHHHHHHHHC--CCCEEEECCCCCCCS------STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHcC--CCCEEEECCCCCCCC------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEc
Confidence            9888888888888887  699999999986442      26899999999999999999999999998875 78999999


Q ss_pred             ccccc
Q 045749          205 SGAAI  209 (210)
Q Consensus       205 S~ag~  209 (210)
                      |.+++
T Consensus       158 S~~~~  162 (278)
T 3sx2_A          158 SSAGL  162 (278)
T ss_dssp             CGGGT
T ss_pred             cHHhc
Confidence            99875

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.96  E-value=1.4e-28  Score=194.75  Aligned_cols=148  Identities=24%  Similarity=0.366  Sum_probs=127.3

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEec--ccCccchhhHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDF--SCDVVSAGNIKA  135 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~--~~~~~~~~~~~~  135 (210)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+ ..+..++.+|+  ++..+.++.+++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHH
Confidence            345679999999999999999999999999999999999999999999887764 34566677776  776666676777


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.+.++  ++|+||||||..... .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        88 ~~~~~g--~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~  158 (247)
T 3i1j_A           88 VEHEFG--RLDGLLHNASIIGPR-TPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGR  158 (247)
T ss_dssp             HHHHHS--CCSEEEECCCCCCCC-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGT
T ss_pred             HHHhCC--CCCEEEECCccCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhc
Confidence            777777  699999999986432 34778999999999999999999999999999998888999999998875

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.96  E-value=1.2e-28  Score=196.66  Aligned_cols=141  Identities=25%  Similarity=0.315  Sum_probs=125.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH--HHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK--LEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~--l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +|+++||||++|||+++|++|+++|++|++++|++++  +++..++++..  +.++.++++|++++.+.++.++++.+.+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            7899999999999999999999999999999999887  78777777654  4578889999999988888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCC-CEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK-GAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~-g~iv~isS~ag~  209 (210)
                      +  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++. |+||++||.++.
T Consensus        80 g--~iD~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  145 (258)
T 3a28_C           80 G--GFDVLVNNAGIAQIKP--LLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAI  145 (258)
T ss_dssp             T--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGT
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhc
Confidence            7  6999999999876543  778999999999999999999999999999998876 999999998874

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.96  E-value=9.8e-29  Score=201.31  Aligned_cols=147  Identities=19%  Similarity=0.289  Sum_probs=127.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccC-ccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD-VVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~  138 (210)
                      ..++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+ +.++.++.+|+++. .+.+..++.+.+
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            3569999999999999999999999999999999999999999999987764 45788999999998 777887788888


Q ss_pred             HhcCCCccEEEEcCCCCCCC----------------------------cccccCCCHHHHHHHhHhhhhHHHHHHHHHHH
Q 045749          139 AIDGLEVGVLINNVGITYPK----------------------------AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLT  190 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~----------------------------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~  190 (210)
                      .++  ++|+||||||+....                            ...+.+.+.+++++++++|+.|++++++.++|
T Consensus        88 ~~g--~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (311)
T 3o26_A           88 HFG--KLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP  165 (311)
T ss_dssp             HHS--SCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             hCC--CCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence            887  699999999987431                            11245678999999999999999999999999


Q ss_pred             HhHhCCCCEEEEecccccc
Q 045749          191 GMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       191 ~m~~~~~g~iv~isS~ag~  209 (210)
                      .|++++.|+||++||.+|.
T Consensus       166 ~l~~~~~~~IV~isS~~~~  184 (311)
T 3o26_A          166 LLQLSDSPRIVNVSSSTGS  184 (311)
T ss_dssp             HHTTSSSCEEEEECCGGGS
T ss_pred             hhccCCCCeEEEEecCCcc
Confidence            9998888999999999874

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.96  E-value=1.7e-28  Score=196.09  Aligned_cols=145  Identities=26%  Similarity=0.335  Sum_probs=125.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++....++.++.++.+|++++.+.++.++++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            46699999999999999999999999999999999999998888888865433336888999999887777766666665


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++   +|+||||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        84 ~g---id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  148 (260)
T 2z1n_A           84 GG---ADILVYSTGGPRPGR--FMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLL  148 (260)
T ss_dssp             TC---CSEEEECCCCCCCBC--GGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             cC---CCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhc
Confidence            54   899999999865533  778999999999999999999999999999998888999999998874

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.96  E-value=1.6e-28  Score=195.72  Aligned_cols=141  Identities=22%  Similarity=0.325  Sum_probs=125.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +|+++||||++|||+++|++|+++|++|++++|+++++++..++++..  +.++.++++|++++.+.++.++++.+.++ 
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-   78 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLG-   78 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTT-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhC-
Confidence            689999999999999999999999999999999999988888888664  45678899999998888887888887776 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                       ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.
T Consensus        79 -~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  143 (256)
T 1geg_A           79 -GFDVIVNNAGVAPSTP--IESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH  143 (256)
T ss_dssp             -CCCEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             -CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhc
Confidence             6999999999875533  77899999999999999999999999999998877 7999999998764

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.96  E-value=1e-28  Score=198.51  Aligned_cols=148  Identities=23%  Similarity=0.356  Sum_probs=128.5

Q ss_pred             CCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHH
Q 045749           56 PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        56 ~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      ...+++.||+++||||++|||+++|++|+++|++|++++| +++..++..+++++.  +.++.++++|++++.+..+.++
T Consensus        22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~   99 (271)
T 4iin_A           22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEAIQ   99 (271)
T ss_dssp             --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHH
T ss_pred             hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHH
Confidence            3456678999999999999999999999999999999999 555566666677654  5678899999999988888888


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          135 AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++.+..+  ++|++|||||+....+  +.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus       100 ~~~~~~g--~id~li~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  170 (271)
T 4iin_A          100 TIVQSDG--GLSYLVNNAGVVRDKL--AIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGE  170 (271)
T ss_dssp             HHHHHHS--SCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHhcC--CCCEEEECCCcCCCcc--cccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhc
Confidence            8888877  6999999999987644  678999999999999999999999999999999888999999998763

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.96  E-value=1.5e-28  Score=197.86  Aligned_cols=144  Identities=28%  Similarity=0.379  Sum_probs=122.9

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ..++.||+++||||++|||+++|++|+++|++|++++|+ +++++..+++.+.  +.++.++.+|+++..+.++. .+..
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~-~~~~  101 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLADLEGAANV-AEEL  101 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT--TCEEEEEECCTTCHHHHHHH-HHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHH-HHHH
Confidence            356779999999999999999999999999999999976 5566677777654  56788999999988666665 3333


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +..+  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus       102 ~~~g--~iD~lv~nAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~  169 (273)
T 3uf0_A          102 AATR--RVDVLVNNAGIIARAP--AEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSF  169 (273)
T ss_dssp             HHHS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HhcC--CCcEEEECCCCCCCCC--chhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhc
Confidence            4454  6999999999976644  779999999999999999999999999999999989999999999875

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.96  E-value=8.6e-29  Score=197.74  Aligned_cols=144  Identities=26%  Similarity=0.403  Sum_probs=126.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH-HHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK-LEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~-l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.||+++||||++|||+++|++|+++|++|++++|++++ +++..+++.+.. +.++.++.+|++++.+.++.++++.+.
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            358999999999999999999999999999999999887 888877776542 346778889999988888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        81 ~g--~iD~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  146 (260)
T 1x1t_A           81 MG--RIDILVNNAGIQHTAL--IEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL  146 (260)
T ss_dssp             HS--CCSEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             cC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhC
Confidence            87  6999999999876543  778899999999999999999999999999998888999999999874

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.96  E-value=1.2e-28  Score=196.46  Aligned_cols=140  Identities=23%  Similarity=0.293  Sum_probs=123.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|++++.+.++.++++.+.+
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999998877765554     3467888999999888888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        78 g--~iD~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  142 (254)
T 1hdc_A           78 G--SVDGLVNNAGISTGMF--LETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGL  142 (254)
T ss_dssp             S--CCCEEEECCCCCCCSC--GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhc
Confidence            7  6999999999876543  678899999999999999999999999999998888999999998874

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.96  E-value=8e-29  Score=197.25  Aligned_cols=147  Identities=24%  Similarity=0.374  Sum_probs=126.2

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~-r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      .....++|+++||||++|||+++|++|+++|++|++++ |+.++.++..+++++.  +.++.++.+|+++..+.++.+++
T Consensus         7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~   84 (256)
T 3ezl_A            7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYASEGNVGDWDSTKQAFDK   84 (256)
T ss_dssp             ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeeEEEecCCCCHHHHHHHHHH
Confidence            33456799999999999999999999999999999988 6777777777777665  56788899999999888888888


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.+.++  ++|+||||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        85 ~~~~~g--~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  154 (256)
T 3ezl_A           85 VKAEVG--EIDVLVNNAGITRDVV--FRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ  154 (256)
T ss_dssp             HHHHTC--CEEEEEECCCCCCCCC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGG
T ss_pred             HHHhcC--CCCEEEECCCCCCCCc--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhc
Confidence            888877  6999999999876544  778999999999999999999999999999999989999999998874

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.96  E-value=2.4e-28  Score=195.14  Aligned_cols=145  Identities=25%  Similarity=0.318  Sum_probs=127.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|+++++++..++++..  +.++..+.+|++++.+.++.++++.+.
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAVNL   88 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            456999999999999999999999999999999999999988888888765  456788899999987777777888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.... ..++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.+++
T Consensus        89 ~g--~iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  155 (260)
T 2zat_A           89 HG--GVDILVSNAAVNPF-FGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAY  155 (260)
T ss_dssp             HS--CCCEEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred             cC--CCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhc
Confidence            87  69999999998642 123678899999999999999999999999999998888999999998874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.96  E-value=1.9e-28  Score=194.59  Aligned_cols=140  Identities=25%  Similarity=0.346  Sum_probs=122.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~-~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++||+++||||++|||+++|++|+++|++|++++|++ +++++   ++++.  +.++.++++|++++.+.++.++++.+.
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIST   79 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999998 66654   34333  456888999999988888878888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        80 ~g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  145 (249)
T 2ew8_A           80 FG--RCDILVNNAGIYPLIP--FDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYW  145 (249)
T ss_dssp             HS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG
T ss_pred             cC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc
Confidence            87  6999999999876543  778999999999999999999999999999998888999999998874

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.96  E-value=1.8e-28  Score=197.80  Aligned_cols=144  Identities=32%  Similarity=0.445  Sum_probs=128.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++.++.+|++++.+.++.++++.+.
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999999988888888765  456788999999988888878888777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHH--hHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTG--MMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~--m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.  |++++.|+||++||.++.
T Consensus        97 ~g--~iD~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~  164 (277)
T 2rhc_B           97 YG--PVDVLVNNAGRPGGGA--TAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK  164 (277)
T ss_dssp             TC--SCSEEEECCCCCCCSC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGT
T ss_pred             hC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccc
Confidence            76  6999999999876543  778999999999999999999999999999  988888999999999874

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.96  E-value=6e-29  Score=199.58  Aligned_cols=138  Identities=27%  Similarity=0.391  Sum_probs=121.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++||||++|||+++|++|+++|++|++++|+++++++..        ..+..++.+|++++.+.++.++++.+.
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN--------LPNTLCAQVDVTDKYTFDTAITRAEKI   84 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC--------CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh--------cCCceEEEecCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999987655321        336788899999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        85 ~g--~iD~lvnnAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~  150 (266)
T 3p19_A           85 YG--PADAIVNNAGMMLLGQ--IDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGK  150 (266)
T ss_dssp             HC--SEEEEEECCCCCCCCC--TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             CC--CCCEEEECCCcCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhC
Confidence            87  6999999999876544  778999999999999999999999999999999889999999999875

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.5e-28  Score=202.45  Aligned_cols=143  Identities=25%  Similarity=0.348  Sum_probs=125.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-----hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN-----HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      +.+|+++||||++|||+++|++|+++|++|++++|+     +++++++.+++...  +.++.++.+|++++.+.++.+++
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHH
Confidence            458999999999999999999999999999988775     55666666666554  56788999999999888888888


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.+.++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        81 ~~~~~g--~iD~lVnnAG~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~  150 (324)
T 3u9l_A           81 IIGEDG--RIDVLIHNAGHMVFGP--AEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSA  150 (324)
T ss_dssp             HHHHHS--CCSEEEECCCCCBCSC--GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HHHHcC--CCCEEEECCCcCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhc
Confidence            888887  6999999999876544  788999999999999999999999999999999999999999999875

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.96  E-value=7.6e-29  Score=197.76  Aligned_cols=138  Identities=22%  Similarity=0.289  Sum_probs=123.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++||+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++++|++++.+.++.++++.+.+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQTL   80 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence            56999999999999999999999999999999999999888877766     4578889999999988888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++  +|+||++||.++.
T Consensus        81 g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~  143 (255)
T 4eso_A           81 G--AIDLLHINAGVSELEP--FDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADE  143 (255)
T ss_dssp             S--SEEEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGS
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhc
Confidence            7  6999999999976544  789999999999999999999999999998854  4899999999875

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=2.6e-28  Score=198.80  Aligned_cols=147  Identities=22%  Similarity=0.347  Sum_probs=128.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+... ..++.++.+|++++.+.++.++++.+
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999999988888876421 12688899999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||.....+..+.+.+.++|++++++|+.|+++++++++|.|++++ |+||++||.++.
T Consensus       103 ~~g--~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~  170 (297)
T 1xhl_A          103 KFG--KIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAG  170 (297)
T ss_dssp             HHS--CCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGS
T ss_pred             hcC--CCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhc
Confidence            887  69999999998755332267889999999999999999999999999998877 999999998764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.96  E-value=2.1e-28  Score=195.41  Aligned_cols=145  Identities=27%  Similarity=0.376  Sum_probs=126.6

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ..+++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|++++.+.++.++++
T Consensus         3 ~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~   77 (261)
T 3n74_A            3 GSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAA   77 (261)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHH
Confidence            346678999999999999999999999999999999999999988877765     456888999999998888888888


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC----CCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK----KGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~----~g~iv~isS~ag~  209 (210)
                      .+.++  ++|++|||||.... ...+.+.+.++|++++++|+.|++++++.++|+|++++    .|+||++||.++.
T Consensus        78 ~~~~g--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~  151 (261)
T 3n74_A           78 LSKFG--KVDILVNNAGIGHK-PQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAG  151 (261)
T ss_dssp             HHHHS--CCCEEEECCCCCCC-SCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTT
T ss_pred             HHhcC--CCCEEEECCccCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhc
Confidence            88887  69999999998753 23367889999999999999999999999999998764    6789999998764

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.96  E-value=1.1e-28  Score=198.98  Aligned_cols=145  Identities=21%  Similarity=0.375  Sum_probs=126.7

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+++.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  + ++.++.+|++++++.++.++++.
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~v~~~~~~~~  100 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--G-DCQAIPADLSSEAGARRLAQALG  100 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--S-CEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--C-ceEEEEeeCCCHHHHHHHHHHHH
Confidence            34577999999999999999999999999999999999999888887777542  2 67888899999877777777777


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCC----CEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK----GAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~----g~iv~isS~ag~  209 (210)
                      +.++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.    |+||++||.++.
T Consensus       101 ~~~g--~iD~lvnnAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~  172 (276)
T 2b4q_A          101 ELSA--RLDILVNNAGTSWGAA--LESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGI  172 (276)
T ss_dssp             HHCS--CCSEEEECCCCCCCCC--TTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGT
T ss_pred             HhcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHc
Confidence            7776  6999999999876543  778899999999999999999999999999988766    899999998874

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.96  E-value=4.1e-28  Score=196.98  Aligned_cols=144  Identities=22%  Similarity=0.230  Sum_probs=125.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cChhHHHHHHHHHHhhCCCceeEEEEEecccCc------------
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEYDFSCDV------------  127 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~-r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~------------  127 (210)
                      +.+|+++||||++|||+++|++|+++|++|++++ |+++++++..++++... +.++.++++|+++..            
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-CCeeEEEEeecCCcccccccccccccc
Confidence            5689999999999999999999999999999999 99999998888886333 457888999999988            


Q ss_pred             -----cchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCC--------------HHHHHHHhHhhhhHHHHHHHHH
Q 045749          128 -----VSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVD--------------EKEWMDIVRVNLEGTTRVTKAV  188 (210)
Q Consensus       128 -----~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~--------------~~~~~~~~~vN~~g~~~l~~~~  188 (210)
                           +.++.++++.+.++  ++|+||||||+....+  +.+.+              .++|++++++|+.|++++++++
T Consensus        86 ~~~~~~v~~~~~~~~~~~g--~iD~lvnnAg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  161 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHWG--RCDVLVNNASSFYPTP--LLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  161 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHHS--CCCEEEECCCCCCCCC--CCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhcC--CCCEEEECCCCCCCCC--hhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHH
Confidence                 77777788888877  6999999999876543  66778              9999999999999999999999


Q ss_pred             HHHhHhCC------CCEEEEecccccc
Q 045749          189 LTGMMRRK------KGAIVNIGSGAAI  209 (210)
Q Consensus       189 l~~m~~~~------~g~iv~isS~ag~  209 (210)
                      +|+|++++      .|+||++||.++.
T Consensus       162 ~~~m~~~~~~~~~~~g~Iv~isS~~~~  188 (291)
T 1e7w_A          162 AHRVAGTPAKHRGTNYSIINMVDAMTN  188 (291)
T ss_dssp             HHHHHTSCGGGSCSCEEEEEECCTTTT
T ss_pred             HHHHHhcCCCCCCCCcEEEEEechhhc
Confidence            99998887      7999999999875

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.96  E-value=1.2e-28  Score=196.78  Aligned_cols=148  Identities=23%  Similarity=0.297  Sum_probs=125.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHH---cCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQ---HGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~---~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ++.+|+++||||++|||+++|++|++   +|++|++++|+++++++..+++++.+++.++.++++|++++.+.++.++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            35689999999999999999999999   899999999999999999888877655678899999999987777766666


Q ss_pred             HH--HhcCCCcc--EEEEcCCCCCCCcccccC-CCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC--CCCEEEEecccccc
Q 045749          137 EM--AIDGLEVG--VLINNVGITYPKAMFFHE-VDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR--KKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~--~~~~~~id--~lvnnAg~~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~--~~g~iv~isS~ag~  209 (210)
                      .+  .++  ++|  +||||||+......++.+ .+.++|++++++|+.|+++++++++|.|+++  +.|+||++||.++.
T Consensus        83 ~~~~~~g--~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
T 1oaa_A           83 RELPRPE--GLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL  160 (259)
T ss_dssp             HHSCCCT--TCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred             Hhccccc--cCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc
Confidence            65  333  466  999999986432123566 7899999999999999999999999999887  67999999999875

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.96  E-value=5.3e-28  Score=193.63  Aligned_cols=145  Identities=21%  Similarity=0.306  Sum_probs=130.3

Q ss_pred             ccCCcEEEEEcCC-ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGAT-DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGas-sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .++||+++||||+ +|||+++|++|+++|++|++++|+.+++++..+++++.. ..++.++++|++++.+.++.++++.+
T Consensus        19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            3679999999997 699999999999999999999999999999988886653 46889999999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||+....+  +.+.+.++|++++++|+.|++++++.++|+|+++ +.|+||++||.++.
T Consensus        98 ~~g--~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~  165 (266)
T 3o38_A           98 KAG--RLDVLVNNAGLGGQTP--VVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGW  165 (266)
T ss_dssp             HHS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGT
T ss_pred             HhC--CCcEEEECCCcCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHc
Confidence            887  6999999999876644  7789999999999999999999999999999887 67899999998875

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=3.7e-28  Score=195.37  Aligned_cols=150  Identities=25%  Similarity=0.352  Sum_probs=129.5

Q ss_pred             cCCCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhH
Q 045749           54 RQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNI  133 (210)
Q Consensus        54 ~~~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~  133 (210)
                      .+++..++.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++.++.+|++++.+.++.+
T Consensus        22 ~~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~   99 (272)
T 1yb1_A           22 MPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSA   99 (272)
T ss_dssp             ---CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCcccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHHH
Confidence            344456678999999999999999999999999999999999999988888888765  457888999999987777777


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          134 KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       134 ~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +++.+.++  ++|++|||||.....+  +.+.+.++|++.+++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus       100 ~~~~~~~g--~iD~li~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~  171 (272)
T 1yb1_A          100 KKVKAEIG--DVSILVNNAGVVYTSD--LFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGH  171 (272)
T ss_dssp             HHHHHHTC--CCSEEEECCCCCCCCC--CGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-C
T ss_pred             HHHHHHCC--CCcEEEECCCcCCCcc--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhc
Confidence            77777776  6999999999876543  667889999999999999999999999999998888999999998874

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.96  E-value=1.7e-28  Score=193.02  Aligned_cols=141  Identities=32%  Similarity=0.441  Sum_probs=123.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++++.+.++.++++.+.++ 
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG-   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC-
Confidence            7899999999999999999999999999999999999999888886433 56788999999999888887788888887 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|. ++.|++|++||.++.
T Consensus        80 -~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~ii~~sS~~~~  142 (235)
T 3l77_A           80 -DVDVVVANAGLGYFKR--LEELSEEEFHEMIEVNLLGVWRTLKAFLDSLK-RTGGLALVTTSDVSA  142 (235)
T ss_dssp             -SCSEEEECCCCCCCCC--TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEECCGGGS
T ss_pred             -CCCEEEECCccccccC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCcEEEEecchhc
Confidence             6999999999876544  78899999999999999999999999999994 446899999988764

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.96  E-value=3e-28  Score=194.76  Aligned_cols=140  Identities=23%  Similarity=0.353  Sum_probs=124.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.||+++||||++|||+++|++|+++|++|++++|+++++++..+++.     .++.++++|++++.+.++.++++.+.+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~   79 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVTAF   79 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----cCceEEEecCCCHHHHHHHHHHHHHHc
Confidence            568999999999999999999999999999999999988877666553     247788999999888888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        80 g--~iD~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  144 (260)
T 1nff_A           80 G--GLHVLVNNAGILNIGT--IEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGL  144 (260)
T ss_dssp             S--CCCEEEECCCCCCCBC--TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhc
Confidence            7  6999999999876543  778899999999999999999999999999998888999999999874

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.96  E-value=2.7e-28  Score=194.20  Aligned_cols=139  Identities=21%  Similarity=0.321  Sum_probs=123.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++++|++++.+.++.++.+.+.+
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999998888776665     3467888999999888888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++ |+||++||.++.
T Consensus        79 g--~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~  142 (253)
T 1hxh_A           79 G--TLNVLVNNAGILLPGD--METGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSW  142 (253)
T ss_dssp             C--SCCEEEECCCCCCCBC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGT
T ss_pred             C--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhc
Confidence            7  6999999999875533  77889999999999999999999999999998877 999999999875

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.2e-28  Score=196.55  Aligned_cols=143  Identities=22%  Similarity=0.250  Sum_probs=116.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++++|++++.+.++.++++.+.
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAKQE   78 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            466999999999999999999999999999999999998887776665     346788899999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcc--cccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC------CCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAM--FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR------KKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~------~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+.  ...+.+.++|++++++|+.|+++++++++|+|+++      +.|+||++||.++.
T Consensus        79 ~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tpc_A           79 FG--HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAF  154 (257)
T ss_dssp             HS--CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             cC--CCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhc
Confidence            87  69999999998765331  12367899999999999999999999999999885      57899999998763

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.96  E-value=3.9e-28  Score=195.08  Aligned_cols=141  Identities=21%  Similarity=0.278  Sum_probs=124.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+++||+++||||++|||+++|++|+++|++|+++++ +++.+++..+++++.  +.++.++++|++++.+.++.++++.
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   91 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFDQAV   91 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3567999999999999999999999999999999776 566778888888765  5678899999999988888888888


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +.++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.+
T Consensus        92 ~~~g--~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~  155 (270)
T 3is3_A           92 AHFG--HLDIAVSNSGVVSFGH--LKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNT  155 (270)
T ss_dssp             HHHS--CCCEEECCCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTT
T ss_pred             HHcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCch
Confidence            8887  6999999999986544  789999999999999999999999999999965  68999999987

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.96  E-value=1.1e-28  Score=197.52  Aligned_cols=143  Identities=20%  Similarity=0.273  Sum_probs=125.5

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC---hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN---HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~---~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+   .++++++.++++..  +.++.++++|++++.+.++.++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~   83 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFD   83 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHH
Confidence            345779999999999999999999999999999998764   45677777777665  5688999999999988888888


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          135 AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++.+.++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|+|  ++.|+||++||.++
T Consensus        84 ~~~~~~g--~iD~lvnnAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m--~~~g~iv~isS~~~  151 (262)
T 3ksu_A           84 FAEKEFG--KVDIAINTVGKVLKKP--IVETSEAEFDAMDTINNKVAYFFIKQAAKHM--NPNGHIITIATSLL  151 (262)
T ss_dssp             HHHHHHC--SEEEEEECCCCCCSSC--GGGCCHHHHHHHHHHHHHHHHHHHHHHHTTE--EEEEEEEEECCCHH
T ss_pred             HHHHHcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHhh--cCCCEEEEEechhh
Confidence            8888887  6999999999887644  7789999999999999999999999999998  34689999999875

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.96  E-value=1.8e-28  Score=196.23  Aligned_cols=142  Identities=15%  Similarity=0.202  Sum_probs=117.7

Q ss_pred             CCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           56 PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        56 ~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      ...+++.||+++||||++|||+++|++|+++|++|++++|+++++.+.   +.+.    .+.++.+|++++.+.++.+++
T Consensus        20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~----~~~~~~~Dv~~~~~v~~~~~~   92 (260)
T 3gem_A           20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQA----GAVALYGDFSCETGIMAFIDL   92 (260)
T ss_dssp             -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHHH----TCEEEECCTTSHHHHHHHHHH
T ss_pred             ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHhc----CCeEEECCCCCHHHHHHHHHH
Confidence            345667899999999999999999999999999999999998765433   3332    267789999999888888888


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.+.++  ++|+||||||......   .+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        93 ~~~~~g--~iD~lv~nAg~~~~~~---~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~  161 (260)
T 3gem_A           93 LKTQTS--SLRAVVHNASEWLAET---PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTR  161 (260)
T ss_dssp             HHHHCS--CCSEEEECCCCCCCCC---TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred             HHHhcC--CCCEEEECCCccCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhc
Confidence            888877  6999999999876533   46788999999999999999999999999999888999999999875

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.96  E-value=3.4e-28  Score=193.75  Aligned_cols=141  Identities=28%  Similarity=0.352  Sum_probs=122.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.||+++||||++|||+++|++|+++|++|++++|+++  ++..+++...  +.++.++.+|++++.+.++.++++.+.+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH--GVKAVHHPADLSDVAQIEALFALAEREF   77 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999876  4555566543  4567888899999888888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        78 g--~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  142 (255)
T 2q2v_A           78 G--GVDILVNNAGIQHVAP--VEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGL  142 (255)
T ss_dssp             S--SCSEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhc
Confidence            7  6999999999875543  678899999999999999999999999999999888999999999875

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.96  E-value=6.6e-28  Score=193.97  Aligned_cols=143  Identities=22%  Similarity=0.323  Sum_probs=125.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~-~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .++.||+++||||++|||+++|++|+++|++|++++++ .+++++..+++++.  +.++.++++|++++.+.++.++++.
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDAEAIEQAIRETV  104 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            45679999999999999999999999999999998665 56778888888765  5678889999999988888888888


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|.|++  .|+||++||.++.
T Consensus       105 ~~~g--~iD~lvnnAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~  170 (271)
T 3v2g_A          105 EALG--GLDILVNSAGIWHSAP--LEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAE  170 (271)
T ss_dssp             HHHS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGT
T ss_pred             HHcC--CCcEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhc
Confidence            8887  6999999999876544  789999999999999999999999999999854  6899999997653

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.96  E-value=1.9e-28  Score=196.87  Aligned_cols=138  Identities=22%  Similarity=0.318  Sum_probs=119.3

Q ss_pred             CCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           56 PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        56 ~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      +.+.+.+||+++||||++|||+++|++|+++|++|++++|+++..            ......+++|++++.+.++.+++
T Consensus         7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~   74 (269)
T 3vtz_A            7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEK   74 (269)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHH
Confidence            344567799999999999999999999999999999999987543            12456788999999888888888


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.+.++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.+++
T Consensus        75 ~~~~~g--~iD~lv~nAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  144 (269)
T 3vtz_A           75 TTKKYG--RIDILVNNAGIEQYSP--LHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSY  144 (269)
T ss_dssp             HHHHHS--CCCEEEECCCCCCCCC--GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HHHHcC--CCCEEEECCCcCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhc
Confidence            888887  6999999999876544  778999999999999999999999999999999889999999999875

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.96  E-value=7.2e-28  Score=192.04  Aligned_cols=137  Identities=26%  Similarity=0.385  Sum_probs=120.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.||+++||||++|||+++|++|+++|++|++++|++++ ++..+++.      . .++++|++++.+.++.++++.+.+
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~------~-~~~~~D~~~~~~~~~~~~~~~~~~   75 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG------G-AFFQVDLEDERERVRFVEEAAYAL   75 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT------C-EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh------C-CEEEeeCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999999877 66555542      3 678899999888888788888887


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        76 g--~iD~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~  140 (256)
T 2d1y_A           76 G--RVDVLVNNAAIAAPGS--ALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL  140 (256)
T ss_dssp             S--CCCEEEECCCCCCCBC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGT
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcccccc
Confidence            7  6999999999876543  778899999999999999999999999999998888999999998874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.96  E-value=6e-28  Score=192.35  Aligned_cols=138  Identities=22%  Similarity=0.330  Sum_probs=122.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ||+++||||++|||+++|++|+++|  ++|++++|++++++++.+++     +.++.++++|++++.+.++.++++.+.+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            7999999999999999999999985  78999999999888877665     4578889999999988888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||...+. .++.+.+.++|++++++|+.|+++++++++|+|++++ |+||++||.++.
T Consensus        77 g--~id~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~  141 (254)
T 3kzv_A           77 G--KIDSLVANAGVLEPV-QNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACN  141 (254)
T ss_dssp             S--CCCEEEEECCCCCCC-TTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCC
T ss_pred             C--CccEEEECCcccCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhc
Confidence            7  699999999986441 3377899999999999999999999999999998876 999999999875

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.96  E-value=4.3e-28  Score=193.66  Aligned_cols=145  Identities=26%  Similarity=0.314  Sum_probs=123.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH-
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA-  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-  139 (210)
                      +.||+++||||++|||+++|++|+++|++|++++|+++++++..++++..  +.++.++++|++++.+.++.++.+.+. 
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            45899999999999999999999999999999999999998888888765  457888999999987777777776665 


Q ss_pred             hcCCCccEEEEcCCCCCC-----CcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYP-----KAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||....     ...++.+.+.++|++++++|+.+++++++.++|.|++++.|+||++||.++.
T Consensus        81 ~g--~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  153 (260)
T 2qq5_A           81 QG--RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSL  153 (260)
T ss_dssp             TT--CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGT
T ss_pred             CC--CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhc
Confidence            55  69999999963211     1123668889999999999999999999999999998888999999998864

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.96  E-value=5.6e-28  Score=191.56  Aligned_cols=136  Identities=24%  Similarity=0.320  Sum_probs=120.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +  +.++.+|++++.+.++.++++.+.+
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~~~   75 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----G--AHPVVMDVADPASVERGFAEALAHL   75 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----T--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----C--CEEEEecCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999988777654432     2  6778899999888888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.+
T Consensus        76 g--~id~lvn~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~  138 (245)
T 1uls_A           76 G--RLDGVVHYAGITRDNF--HWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV  138 (245)
T ss_dssp             S--SCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch
Confidence            7  6999999999876543  7789999999999999999999999999999988889999999976

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.96  E-value=1.9e-28  Score=195.78  Aligned_cols=143  Identities=24%  Similarity=0.296  Sum_probs=124.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~-~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++||+++||||++|||+++|++|+++|++|+++ +|+++..++..+++++.  +.++.++++|++++.+.++.++++.+
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT--TSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4669999999999999999999999999999998 66777788888887665  45788899999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||.... ..++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++.
T Consensus        83 ~~g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~  148 (259)
T 3edm_A           83 KFG--EIHGLVHVAGGLIA-RKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGR  148 (259)
T ss_dssp             HHC--SEEEEEECCCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHH
T ss_pred             HhC--CCCEEEECCCccCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhc
Confidence            887  69999999997633 234778999999999999999999999999999865  5899999998764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=7.8e-28  Score=194.21  Aligned_cols=146  Identities=27%  Similarity=0.348  Sum_probs=126.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.||+++||||++|||+++|++|+++|++|++++|+++++++..+++..... ..++.++.+|++++.+.++.++++.+.
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999999999888888865421 126888999999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCc--ccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKA--MFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  ..+.+.+.++|++++++|+.|+++++++++|.|++++ |+||++||.++.
T Consensus        84 ~g--~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~  152 (280)
T 1xkq_A           84 FG--KIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAG  152 (280)
T ss_dssp             HS--CCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGS
T ss_pred             cC--CCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCcccc
Confidence            87  6999999999865422  0156789999999999999999999999999998777 999999998764

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.96  E-value=3.8e-28  Score=195.00  Aligned_cols=142  Identities=25%  Similarity=0.364  Sum_probs=122.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~-~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      +...||+++||||++|||+++|++|+++|++|+++ .|+++.++++.++++..  +.++.++++|++++.+.++.++++.
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  100 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADVSDPAAVRRLFATAE  100 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            34569999999999999999999999999999987 55667788888887765  5678889999999988888888888


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +.++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|.|++  +|+||++||.++
T Consensus       101 ~~~g--~iD~lvnnAG~~~~~~--~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~  165 (267)
T 3u5t_A          101 EAFG--GVDVLVNNAGIMPLTT--IAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQV  165 (267)
T ss_dssp             HHHS--CEEEEEECCCCCCCCC--GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHH
T ss_pred             HHcC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhh
Confidence            8887  6999999999976544  788999999999999999999999999999854  489999999865

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.96  E-value=1.5e-27  Score=196.78  Aligned_cols=144  Identities=22%  Similarity=0.230  Sum_probs=125.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cChhHHHHHHHHHHhhCCCceeEEEEEecccCc------------
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEYDFSCDV------------  127 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~-r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~------------  127 (210)
                      +.+|+++||||++|||+++|++|+++|++|++++ |++++++++.++++... +.++.++++|+++..            
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCC-------CC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCeEEEEEeeCCCchhccccccccccc
Confidence            6799999999999999999999999999999999 99999998888886333 457888999999988            


Q ss_pred             -----cchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCC--------------HHHHHHHhHhhhhHHHHHHHHH
Q 045749          128 -----VSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVD--------------EKEWMDIVRVNLEGTTRVTKAV  188 (210)
Q Consensus       128 -----~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~--------------~~~~~~~~~vN~~g~~~l~~~~  188 (210)
                           +.++.++++.+.++  ++|+||||||+....+  +.+.+              .++|++++++|+.|++++++++
T Consensus       123 ~~~~~~v~~~~~~~~~~~g--~iD~lVnnAG~~~~~~--~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  198 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWG--RCDVLVNNASSFYPTP--LLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  198 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHS--CCCEEEECCCCCCCCC--SCC-------------CHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcC--CCCEEEECCCCCCCCC--hhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence                 77777778878877  6999999999876543  66777              8999999999999999999999


Q ss_pred             HHHhHhCC------CCEEEEecccccc
Q 045749          189 LTGMMRRK------KGAIVNIGSGAAI  209 (210)
Q Consensus       189 l~~m~~~~------~g~iv~isS~ag~  209 (210)
                      +|.|.+++      .|+||++||.++.
T Consensus       199 ~~~m~~~~~~~~~~~g~IV~isS~~~~  225 (328)
T 2qhx_A          199 AHRVAGTPAKHRGTNYSIINMVDAMTN  225 (328)
T ss_dssp             HHHHHHSCGGGSCSCEEEEEECCTTTT
T ss_pred             HHHHHhcCCcCCCCCcEEEEECchhhc
Confidence            99998887      7999999999874

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.96  E-value=5.3e-28  Score=194.14  Aligned_cols=143  Identities=24%  Similarity=0.391  Sum_probs=125.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~-r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.+|+++||||++|||+++|++|+++|++|++++ |+.+.+++..+++...  +.++.++.+|+++..+.++.++++.+.
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESCERCAEKVLAD  100 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999998 6666666666666543  567889999999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus       101 ~g--~id~li~nAg~~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  166 (269)
T 3gk3_A          101 FG--KVDVLINNAGITRDAT--FMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGS  166 (269)
T ss_dssp             HS--CCSEEEECCCCCCCBC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             cC--CCCEEEECCCcCCCcc--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhc
Confidence            87  6999999999886644  778999999999999999999999999999999888999999998763

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.95  E-value=6.3e-28  Score=195.51  Aligned_cols=148  Identities=20%  Similarity=0.265  Sum_probs=119.3

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhCCCceeEEEEEeccc----Cccchh
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFSC----DVVSAG  131 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~-~~l~~~~~~l~~~~~~~~~~~~~~D~~~----~~~~~~  131 (210)
                      ...++.||+++||||++|||+++|++|+++|++|++++|++ ++++++.++++... +.++.++++|+++    +.+.++
T Consensus        17 ~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~v~~   95 (288)
T 2x9g_A           17 RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPASCEE   95 (288)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHHHHH
Confidence            34456799999999999999999999999999999999998 88888888886333 4578889999999    666666


Q ss_pred             hHHHHHHHhcCCCccEEEEcCCCCCCCcccc-----cC-----CCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-----
Q 045749          132 NIKAIEMAIDGLEVGVLINNVGITYPKAMFF-----HE-----VDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-----  196 (210)
Q Consensus       132 ~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~-----~~-----~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-----  196 (210)
                      .++++.+.++  ++|+||||||.....+  +     .+     .+.++|++++++|+.|++++++.++|.|++++     
T Consensus        96 ~~~~~~~~~g--~iD~lvnnAG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~  171 (288)
T 2x9g_A           96 IINSCFRAFG--RCDVLVNNASAFYPTP--LVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTS  171 (288)
T ss_dssp             HHHHHHHHHS--CCCEEEECCCCCCCCC--SCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------C
T ss_pred             HHHHHHHhcC--CCCEEEECCCCCCCCc--cccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCC
Confidence            6667777776  6999999999876533  4     45     78899999999999999999999999998876     


Q ss_pred             -CCEEEEecccccc
Q 045749          197 -KGAIVNIGSGAAI  209 (210)
Q Consensus       197 -~g~iv~isS~ag~  209 (210)
                       .|+||++||.++.
T Consensus       172 ~~g~iv~isS~~~~  185 (288)
T 2x9g_A          172 SNLSIVNLCDAMVD  185 (288)
T ss_dssp             CCEEEEEECCTTTT
T ss_pred             CCeEEEEEeccccc
Confidence             7899999999874

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.95  E-value=1.1e-27  Score=192.85  Aligned_cols=143  Identities=20%  Similarity=0.240  Sum_probs=118.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccC----ccchhhHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCD----VVSAGNIKA  135 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~----~~~~~~~~~  135 (210)
                      +.||+++||||++|||+++|++|+++|++|++++| ++++++++.+++++.. +.++.++.+|++++    .+.++.+++
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHHH
Confidence            56899999999999999999999999999999999 9988888888887653 34678899999998    777777777


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCH-----------HHHHHHhHhhhhHHHHHHHHHHHHhHhCCC------C
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDE-----------KEWMDIVRVNLEGTTRVTKAVLTGMMRRKK------G  198 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~-----------~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~------g  198 (210)
                      +.+.++  ++|+||||||.....+  +.+.+.           ++|++++++|+.|+++++++++|+|+ ++.      |
T Consensus        88 ~~~~~g--~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g  162 (276)
T 1mxh_A           88 SFRAFG--RCDVLVNNASAYYPTP--LLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNL  162 (276)
T ss_dssp             HHHHHS--CCCEEEECCCCCCCCC--SCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCE
T ss_pred             HHHhcC--CCCEEEECCCCCCCCC--ccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCc
Confidence            777777  6999999999876543  667777           99999999999999999999999997 555      8


Q ss_pred             EEEEecccccc
Q 045749          199 AIVNIGSGAAI  209 (210)
Q Consensus       199 ~iv~isS~ag~  209 (210)
                      +||++||.++.
T Consensus       163 ~iv~isS~~~~  173 (276)
T 1mxh_A          163 SVVNLCDAMTD  173 (276)
T ss_dssp             EEEEECCGGGG
T ss_pred             EEEEECchhhc
Confidence            99999998875

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.95  E-value=3.3e-28  Score=194.81  Aligned_cols=146  Identities=21%  Similarity=0.283  Sum_probs=128.4

Q ss_pred             cccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHH-HHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           59 LKSYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKL-EKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        59 ~~~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l-~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      ++++||+++||||+  +|||+++|++|+++|++|++++|+.++. ++..+++.+.. +.++.++++|++++.+.++.+++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~   94 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKLVKD   94 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHHHHH
Confidence            45679999999999  9999999999999999999999987654 66667776543 56788899999999888888888


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.+.++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        95 ~~~~~g--~id~li~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  164 (267)
T 3gdg_A           95 VVADFG--QIDAFIANAGATADSG--ILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGH  164 (267)
T ss_dssp             HHHHTS--CCSEEEECCCCCCCSC--TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             HHHHcC--CCCEEEECCCcCCCCC--cccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEcccccc
Confidence            888877  6999999999887654  778899999999999999999999999999999889999999998874

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=7.1e-28  Score=192.99  Aligned_cols=138  Identities=22%  Similarity=0.295  Sum_probs=118.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++     ..++.++.+|++++++.++.++++.+.+
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEEF   78 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999998877665544     2467888999999988888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.| ++ .|+||++||.++.
T Consensus        79 g--~iD~lvnnAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~  141 (263)
T 2a4k_A           79 G--RLHGVAHFAGVAHSAL--SWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL  141 (263)
T ss_dssp             S--CCCEEEEGGGGTTTTC------CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC
T ss_pred             C--CCcEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc
Confidence            7  6999999999876543  6788999999999999999999999999999 55 7999999998763

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.95  E-value=3.5e-28  Score=193.16  Aligned_cols=138  Identities=27%  Similarity=0.501  Sum_probs=116.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|++++.+.++.++++.+.++  
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--   73 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWC--   73 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHTSCTTTC--
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHhCC--
Confidence            58999999999999999999999999999999998888777665     24578888999887555554444444444  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|+||||||+... ..++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        74 ~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~  138 (248)
T 3asu_A           74 NIDILVNNAGLALG-MEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS  138 (248)
T ss_dssp             CCCEEEECCCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             CCCEEEECCCcCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhc
Confidence            69999999998632 123678899999999999999999999999999998888999999999874

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.95  E-value=1.6e-27  Score=192.62  Aligned_cols=143  Identities=19%  Similarity=0.282  Sum_probs=123.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH-HHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK-LEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~-l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++ .++..+++++.  +.++.++.+|++++.+.++.++++.
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~  102 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEAV  102 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999998754 56666666654  4568889999999888888788888


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|  ++.|+||++||.++.
T Consensus       103 ~~~g--~iD~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~  168 (283)
T 1g0o_A          103 KIFG--KLDIVCSNSGVVSFGH--VKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQ  168 (283)
T ss_dssp             HHHS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGT
T ss_pred             HHcC--CCCEEEECCCcCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhc
Confidence            8887  6999999999876543  7789999999999999999999999999998  456999999998874

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.95  E-value=9.3e-28  Score=194.02  Aligned_cols=141  Identities=21%  Similarity=0.307  Sum_probs=123.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------------hhHHHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN------------HNKLEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~------------~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      .+++||+++||||++|||+++|++|+++|++|++++|+            .+++++..++++..  +.++.++++|++++
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRDR   83 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTCH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCCH
Confidence            35679999999999999999999999999999999998            67777777777664  56788999999999


Q ss_pred             ccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      .+.++.++++.+.++  ++|+||||||+....    .+.+.++|++++++|+.|+++++++++|+|  ++.|+||++||.
T Consensus        84 ~~v~~~~~~~~~~~g--~id~lv~nAg~~~~~----~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~  155 (287)
T 3pxx_A           84 AAVSRELANAVAEFG--KLDVVVANAGICPLG----AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHHHHHHS--CCCEEEECCCCCCCC----TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCH
T ss_pred             HHHHHHHHHHHHHcC--CCCEEEECCCcCccc----CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccc
Confidence            888888888888887  699999999987543    247889999999999999999999999998  456899999998


Q ss_pred             ccc
Q 045749          207 AAI  209 (210)
Q Consensus       207 ag~  209 (210)
                      ++.
T Consensus       156 ~~~  158 (287)
T 3pxx_A          156 AGL  158 (287)
T ss_dssp             HHH
T ss_pred             hhc
Confidence            764

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=6.4e-28  Score=194.30  Aligned_cols=143  Identities=26%  Similarity=0.374  Sum_probs=119.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh-CCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAE-NPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++... ..+.++.++.+|++++.+.++.++++.+.
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999999999999999999988888777432 12456888999999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCC----CHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEV----DEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~----~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++  ++|+||||||.....+  +.+.    +.++|++++++|+.|+++++++++|.|++++ |+||++||.++
T Consensus        84 ~g--~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~  151 (278)
T 1spx_A           84 FG--KLDILVNNAGAAIPDS--QSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIAS  151 (278)
T ss_dssp             HS--CCCEEEECCC---------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTS
T ss_pred             cC--CCCEEEECCCCCCCcc--cccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccc
Confidence            87  6999999999875533  5667    9999999999999999999999999998876 99999999887

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.95  E-value=9.7e-28  Score=193.90  Aligned_cols=142  Identities=23%  Similarity=0.297  Sum_probs=121.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|++++.+.++.++++.+.
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCLAA   76 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            456999999999999999999999999999999999998887765543     457888999999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcc---cccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAM---FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||+......   ...+.+.++|++++++|+.|+++++|+++|+|++++ |+||++||.++.
T Consensus        77 ~g--~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~  146 (281)
T 3zv4_A           77 FG--KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGF  146 (281)
T ss_dssp             HS--CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGT
T ss_pred             cC--CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhc
Confidence            87  69999999998643211   122455678999999999999999999999998765 999999999875

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.95  E-value=9.4e-28  Score=212.22  Aligned_cols=142  Identities=25%  Similarity=0.355  Sum_probs=121.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh---------hHHHHHHHHHHhhCCCceeEEEEEecccCccc
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH---------NKLEKISNEIQAENPNTQINIVEYDFSCDVVS  129 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~---------~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~  129 (210)
                      +++.||+++||||++|||+++|++|+++|++|++.+|+.         ++++++.+++++.+  .+.   .+|+++..+.
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g--~~~---~~d~~d~~~~   78 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG--GVA---VADYNNVLDG   78 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTT--CEE---EEECCCTTCH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcC--CeE---EEEcCCHHHH
Confidence            456799999999999999999999999999999998865         66778888887652  222   3688887777


Q ss_pred             hhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          130 AGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       130 ~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++.++++.+.++  ++|+||||||+....+  +.+++.++|+++|++|+.|+++++|+++|+|++++.|+|||+||.+|.
T Consensus        79 ~~~v~~~~~~~G--~iDiLVnNAGi~~~~~--~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~  154 (604)
T 2et6_A           79 DKIVETAVKNFG--TVHVIINNAGILRDAS--MKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGL  154 (604)
T ss_dssp             HHHHHHHHHHHS--CCCEEEECCCCCCCBC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHcC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc
Confidence            777888888887  6999999999876543  789999999999999999999999999999999888999999998764

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.95  E-value=3.8e-28  Score=199.88  Aligned_cols=144  Identities=24%  Similarity=0.322  Sum_probs=128.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC----------hhHHHHHHHHHHhhCCCceeEEEEEecccCccc
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN----------HNKLEKISNEIQAENPNTQINIVEYDFSCDVVS  129 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~----------~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~  129 (210)
                      .+.||+++||||++|||+++|++|+++|++|++++|+          .+.+++..+++...  +.++.++.+|++++.+.
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v  101 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVADWDQA  101 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTTSHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHH
Confidence            4679999999999999999999999999999999998          77888888888765  56788899999999888


Q ss_pred             hhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC------CCEEEEe
Q 045749          130 AGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK------KGAIVNI  203 (210)
Q Consensus       130 ~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~------~g~iv~i  203 (210)
                      ++.++++.+.++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|.+++      .|+||++
T Consensus       102 ~~~~~~~~~~~g--~iD~lv~nAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~i  177 (322)
T 3qlj_A          102 AGLIQTAVETFG--GLDVLVNNAGIVRDRM--IANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINT  177 (322)
T ss_dssp             HHHHHHHHHHHS--CCCEEECCCCCCCCCC--GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHHHHHHHHHcC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEE
Confidence            888888888887  6999999999987644  78999999999999999999999999999997643      3899999


Q ss_pred             cccccc
Q 045749          204 GSGAAI  209 (210)
Q Consensus       204 sS~ag~  209 (210)
                      ||.++.
T Consensus       178 sS~~~~  183 (322)
T 3qlj_A          178 SSGAGL  183 (322)
T ss_dssp             CCHHHH
T ss_pred             cCHHHc
Confidence            998763

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=5.3e-27  Score=189.08  Aligned_cols=146  Identities=27%  Similarity=0.380  Sum_probs=129.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..++++......++.++.+|++++.+.++.++++.+.
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            46799999999999999999999999999999999999999888888877644467888999999988788777888777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCC--CEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK--GAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~--g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.++|++.+++|+.|++++++.++|.|++++.  |+||++||.++.
T Consensus       109 ~g--~iD~vi~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  176 (279)
T 1xg5_A          109 HS--GVDICINNAGLARPDT--LLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGH  176 (279)
T ss_dssp             HC--CCSEEEECCCCCCCCC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGT
T ss_pred             CC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhc
Confidence            76  6999999999876543  678899999999999999999999999999988764  899999998764

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.95  E-value=6.6e-28  Score=194.52  Aligned_cols=140  Identities=27%  Similarity=0.359  Sum_probs=124.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ..+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++++.+.++.++++.+.+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLARY   77 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            45899999999999999999999999999999999998877665543     4568889999999988888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        78 g--~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  142 (281)
T 3m1a_A           78 G--RVDVLVNNAGRTQVGA--FEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQ  142 (281)
T ss_dssp             S--CCSEEEECCCCEEECC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             C--CCCEEEECCCcCCCCC--hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc
Confidence            7  6999999999875543  778999999999999999999999999999999888999999998875

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.95  E-value=1.8e-27  Score=190.35  Aligned_cols=141  Identities=22%  Similarity=0.289  Sum_probs=123.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++.     .++.++++|++++.+.++.++++.+.
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~d~~~v~~~~~~~~~~   83 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-----NGGFAVEVDVTKRASVDAAMQKAIDA   83 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT-----TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-----cCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence            4569999999999999999999999999999999999888776654432     25678899999988888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.++|++.+++|+.|+++++++++|+|++++ .|+||++||.++.
T Consensus        84 ~g--~iD~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  150 (263)
T 3ak4_A           84 LG--GFDLLCANAGVSTMRP--AVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAK  150 (263)
T ss_dssp             HT--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT
T ss_pred             cC--CCCEEEECCCcCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccc
Confidence            87  6999999999876543  67889999999999999999999999999999887 7999999998764

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.95  E-value=4.7e-28  Score=194.96  Aligned_cols=142  Identities=27%  Similarity=0.431  Sum_probs=120.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +. |+++||||++|||+++|++|+++|++|++++|+++++++..+++...   .++.++.+|++++.+.++.++.+.+.+
T Consensus        20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~   95 (272)
T 2nwq_A           20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPEEF   95 (272)
T ss_dssp             -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred             cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            44 89999999999999999999999999999999999888887777432   467888999998866666555555555


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCC-EEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKG-AIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g-~iv~isS~ag~  209 (210)
                      +  ++|+||||||.... ..++.+.+.++|++++++|+.|++++++.++|.|++++.| +||++||.++.
T Consensus        96 g--~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~  162 (272)
T 2nwq_A           96 A--TLRGLINNAGLALG-TDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGK  162 (272)
T ss_dssp             S--SCCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGT
T ss_pred             C--CCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhc
Confidence            5  69999999998653 1237789999999999999999999999999999988888 99999999874

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.95  E-value=2.1e-27  Score=189.96  Aligned_cols=148  Identities=21%  Similarity=0.266  Sum_probs=122.2

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ..+++.+|+++||||++|||++++++|+++|++|++++|+++++++..++++..  +.++.++.+|++++.+.++.++++
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   85 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTV   85 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHH
Confidence            445677999999999999999999999999999999999999988888888765  456788899999887777777777


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+.+++ ++|++|||||.....+  +.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        86 ~~~~~~-~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~  155 (266)
T 1xq1_A           86 SSMFGG-KLDILINNLGAIRSKP--TLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGV  155 (266)
T ss_dssp             HHHHTT-CCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----
T ss_pred             HHHhCC-CCcEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence            777722 6999999999875533  678899999999999999999999999999998888999999998764

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.95  E-value=4e-27  Score=187.53  Aligned_cols=147  Identities=24%  Similarity=0.398  Sum_probs=128.6

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+++.+|+++||||++|||++++++|+++|++|++++|+++++++..++++..  +.++.++.+|++++.+.++.++++.
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   85 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRSVH   85 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999999999888888888664  4568889999999877777778887


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|++|||||.... ..++.+.+.++|++.+++|+.|+++++++++|.|++++.++||++||.++.
T Consensus        86 ~~~~--~id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  154 (260)
T 3awd_A           86 EQEG--RVDILVACAGICIS-EVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGL  154 (260)
T ss_dssp             HHHS--CCCEEEECCCCCCC-SCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HHcC--CCCEEEECCCCCCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhc
Confidence            7776  69999999998752 123678899999999999999999999999999998888999999998774

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.95  E-value=2.3e-27  Score=192.67  Aligned_cols=143  Identities=23%  Similarity=0.325  Sum_probs=121.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHH-HHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKL-EKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l-~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++. ++..+++++.  +.++.++++|++++.+.++.++++.+
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  121 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE--GVKCVLLPGDLSDEQHCKDIVQETVR  121 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999987654 4444444443  56788999999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||..... ..+.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++.
T Consensus       122 ~~g--~iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~  187 (291)
T 3ijr_A          122 QLG--SLNILVNNVAQQYPQ-QGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAY  187 (291)
T ss_dssp             HHS--SCCEEEECCCCCCCC-SSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHH
T ss_pred             HcC--CCCEEEECCCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhc
Confidence            887  699999999986542 33778899999999999999999999999999843  5899999998764

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.95  E-value=4.4e-27  Score=185.73  Aligned_cols=141  Identities=33%  Similarity=0.363  Sum_probs=125.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-------NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-------~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      +|+++||||++|||++++++|+++|+       +|++++|+++++++..+++...  +.++.++.+|++++.+.++.+++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHHH
Confidence            78999999999999999999999999       9999999999888888887654  56788999999998777777777


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.+.++  ++|++|||||.....+  +.+.+.++|++.+++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        80 ~~~~~g--~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  149 (244)
T 2bd0_A           80 IVERYG--HIDCLVNNAGVGRFGA--LSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT  149 (244)
T ss_dssp             HHHHTS--CCSEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HHHhCC--CCCEEEEcCCcCCcCc--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhc
Confidence            777776  6999999999875543  678899999999999999999999999999988888999999998874

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.95  E-value=1e-27  Score=191.76  Aligned_cols=134  Identities=22%  Similarity=0.349  Sum_probs=119.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.+           ..++.++++|++++.+.++.++++.+.
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~   93 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREGIER   93 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            456999999999999999999999999999999999865422           336788999999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++
T Consensus        94 ~g--~iD~lv~nAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (260)
T 3un1_A           94 FG--RIDSLVNNAGVFLAKP--FVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLV  158 (260)
T ss_dssp             HS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTT
T ss_pred             CC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhh
Confidence            87  6999999999976644  77899999999999999999999999999999999999999999865

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.95  E-value=2.5e-27  Score=189.37  Aligned_cols=143  Identities=21%  Similarity=0.331  Sum_probs=120.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH-HHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK-LEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~-l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +..+|+++||||++|||+++|++|+++|++|++++|+.++ .+...+.+.+.  +.++.++++|++++.+.++.++++.+
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   81 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV--EERLQFVQADVTKKEDLHKIVEEAMS   81 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG--GGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3458999999999999999999999999999999877654 44444433332  46789999999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      .++  ++|++|||||.......++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.
T Consensus        82 ~~g--~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~  147 (264)
T 3i4f_A           82 HFG--KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQ  147 (264)
T ss_dssp             HHS--CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             HhC--CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeec
Confidence            887  699999999954333344778999999999999999999999999999999989999999998

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.95  E-value=2.3e-27  Score=192.90  Aligned_cols=143  Identities=16%  Similarity=0.197  Sum_probs=122.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh--hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH--NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+.  +..+++.+++++.  +.++.++++|++++.+.++.++++.
T Consensus        46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            45799999999999999999999999999999999973  4566666666554  5678889999999988888888888


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|+||||||..... .++.+.+.++|++++++|+.|+++++++++|.|.+  +|+||++||.++.
T Consensus       124 ~~~g--~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~  190 (294)
T 3r3s_A          124 EALG--GLDILALVAGKQTAI-PEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAY  190 (294)
T ss_dssp             HHHT--CCCEEEECCCCCCCC-SSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGT
T ss_pred             HHcC--CCCEEEECCCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhc
Confidence            8887  699999999986532 23778999999999999999999999999998844  4899999999875

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.95  E-value=7.1e-27  Score=185.50  Aligned_cols=142  Identities=27%  Similarity=0.449  Sum_probs=123.0

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCcee-EEEEEecccCccchhhHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQI-NIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~  136 (210)
                      .+++.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++ .++.+|+++..+.++.++++
T Consensus         6 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~   80 (254)
T 2wsb_A            6 VFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAEA   80 (254)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHHH
Confidence            34567999999999999999999999999999999999998888776666     2345 78889999887777767776


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+ ++  ++|++|||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        81 ~~-~~--~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  148 (254)
T 2wsb_A           81 EA-VA--PVSILVNSAGIARLHD--ALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGT  148 (254)
T ss_dssp             HH-HS--CCCEEEECCCCCCCBC--STTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             Hh-hC--CCcEEEECCccCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhc
Confidence            66 65  6999999999876543  678899999999999999999999999999998888999999998764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.95  E-value=5.9e-27  Score=188.28  Aligned_cols=147  Identities=21%  Similarity=0.308  Sum_probs=126.9

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++..   ..++.++.+|++++.+.++.++++.
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   87 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTI   87 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHH
Confidence            3456799999999999999999999999999999999998887776666522   2368889999999888888788887


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|++|||||.....+.++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||.+++
T Consensus        88 ~~~~--~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  157 (278)
T 2bgk_A           88 AKHG--KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSF  157 (278)
T ss_dssp             HHHS--CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGT
T ss_pred             HHcC--CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeecccc
Confidence            7776  699999999987543344678899999999999999999999999999998888999999998764

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.95  E-value=2.3e-27  Score=188.04  Aligned_cols=142  Identities=23%  Similarity=0.410  Sum_probs=108.7

Q ss_pred             CCCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHH
Q 045749           55 QPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        55 ~~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      +..+.+.++|+++||||++|||+++|++|+++|++|++++|+++++++..+++     ..++.+..+|+++.    +.++
T Consensus         6 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~----~~~~   76 (249)
T 3f9i_A            6 HHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANK----EECS   76 (249)
T ss_dssp             ---CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSH----HHHH
T ss_pred             ccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCH----HHHH
Confidence            33455677999999999999999999999999999999999999988877766     34567777888765    3344


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          135 AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++.+..+  ++|++|||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        77 ~~~~~~~--~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  147 (249)
T 3f9i_A           77 NLISKTS--NLDILVCNAGITSDTL--AIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGI  147 (249)
T ss_dssp             HHHHTCS--CCSEEEECCC---------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC-
T ss_pred             HHHHhcC--CCCEEEECCCCCCCCc--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhc
Confidence            5555444  6999999999876543  667889999999999999999999999999999888999999998875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.95  E-value=8.2e-27  Score=185.94  Aligned_cols=143  Identities=21%  Similarity=0.377  Sum_probs=126.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.+|+++||||++|||++++++|+++|++|++++| +++++++..++++..  +.++.++.+|++++.+..+.++++.+.
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999 888888888887654  457888999999987777777888777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||.++.
T Consensus        83 ~g--~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~  149 (261)
T 1gee_A           83 FG--KLDVMINNAGLENPVS--SHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK  149 (261)
T ss_dssp             HS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT
T ss_pred             cC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhc
Confidence            77  6999999999876533  67889999999999999999999999999999877 7999999998764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.95  E-value=4.7e-27  Score=190.11  Aligned_cols=144  Identities=28%  Similarity=0.397  Sum_probs=126.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++||||++|||+++|++|+++|++|++++|+++++++..++++..  +.++.++.+|++++++.++.++++.+.
T Consensus        41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999999999888888887654  456888999999987777777777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus       119 ~~--~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~  184 (285)
T 2c07_A          119 HK--NVDILVNNAGITRDNL--FLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGL  184 (285)
T ss_dssp             CS--CCCEEEECCCCCCCCC--TTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHH
T ss_pred             cC--CCCEEEECCCCCCCCc--hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhc
Confidence            66  6999999999876543  678899999999999999999999999999988888999999998753

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.95  E-value=8.3e-27  Score=185.08  Aligned_cols=145  Identities=26%  Similarity=0.334  Sum_probs=127.2

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+++.+|+++||||++|||++++++|+++|++|++++|+++++++..++++..  +.++.++.+|++++.+.++.++++.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   83 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            45577999999999999999999999999999999999999888888888765  4467888999999877777777777


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|++|||||.....+  + +.+.++|++.+++|+.|++++++.++|.|++++.++||++||.++.
T Consensus        84 ~~~~--~~d~vi~~Ag~~~~~~--~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  150 (255)
T 1fmc_A           84 SKLG--KVDILVNNAGGGGPKP--F-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE  150 (255)
T ss_dssp             HHHS--SCCEEEECCCCCCCCC--T-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HhcC--CCCEEEECCCCCCCCC--C-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc
Confidence            7776  6999999999876533  4 6789999999999999999999999999988888999999998764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.95  E-value=5.6e-27  Score=187.90  Aligned_cols=143  Identities=23%  Similarity=0.375  Sum_probs=125.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEE-EecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~-~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.+|+++||||++|||+++|++|+++|++|++ .+|+.+++++..+++.+.  +.++.++.+|++++.+.++.++++.+.
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN--GGNGRLLSFDVANREQCREVLEHEIAQ  101 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999966 567888888888888776  457888999999998888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhH-hCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMM-RRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~-~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.++|++.+++|+.|++++++.++|.|+ +++.|+||++||.++.
T Consensus       102 ~g--~id~li~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  168 (267)
T 4iiu_A          102 HG--AWYGVVSNAGIARDAA--FPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGV  168 (267)
T ss_dssp             HC--CCSEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHH
T ss_pred             hC--CccEEEECCCCCCCCc--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhc
Confidence            87  6999999999886644  77899999999999999999999999999887 5677999999998763

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.95  E-value=4.6e-27  Score=188.31  Aligned_cols=133  Identities=28%  Similarity=0.370  Sum_probs=118.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++||||++|||+++|++|+++|++|++++|++++             +.++.++++|++++.+.++.++++.+.
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   71 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKE   71 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999998654             235678899999988888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        72 ~g--~iD~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  137 (264)
T 2dtx_A           72 YG--SISVLVNNAGIESYGK--IESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQAS  137 (264)
T ss_dssp             HS--CCCEEEECCCCCCCBC--TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGT
T ss_pred             cC--CCCEEEECCCCCCCCC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhc
Confidence            87  6999999999876543  778899999999999999999999999999998888999999998874

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.95  E-value=6.6e-27  Score=187.96  Aligned_cols=143  Identities=24%  Similarity=0.307  Sum_probs=125.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~-~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+|+++||||++|||+++|++|+++|++|+++ +|+++.+++..+++.+.  +.++.++.+|++++.+.++.++++.+.+
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            47999999999999999999999999999876 78888888888888765  5688899999999988888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC---CCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR---KKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~---~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||.... ..++.+.+.++|++++++|+.|++++++.++|.|.++   +.|+||++||.++.
T Consensus       103 g--~id~li~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~  171 (272)
T 4e3z_A          103 G--RLDGLVNNAGIVDY-PQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAI  171 (272)
T ss_dssp             S--CCCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHH
T ss_pred             C--CCCEEEECCCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhc
Confidence            7  69999999998754 1337788999999999999999999999999999763   46899999998763

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.95  E-value=5.2e-27  Score=185.51  Aligned_cols=145  Identities=31%  Similarity=0.499  Sum_probs=126.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++++|+++||||++|||++++++|+++|++|++++|+++++++..+++.+.. +.++.++.+|++++.+.++.++++.+
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            34669999999999999999999999999999999999998888877776522 45678889999988777777777777


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .++  ++|++|||||.....+  +.+.+.++|++.+++|+.|++++++.++|.|++++.|+||++||.++
T Consensus        82 ~~~--~~d~vi~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~  147 (248)
T 2pnf_A           82 LVD--GIDILVNNAGITRDKL--FLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVG  147 (248)
T ss_dssp             HSS--CCSEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHH
T ss_pred             hcC--CCCEEEECCCCCCCCc--cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHh
Confidence            776  6999999999876533  67889999999999999999999999999999888899999999865

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.95  E-value=1.1e-27  Score=190.95  Aligned_cols=138  Identities=30%  Similarity=0.368  Sum_probs=113.8

Q ss_pred             CCCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHH
Q 045749           55 QPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        55 ~~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      +....++.+|+++||||++|||+++|++|+++|++|++++|++++++             ++..+++|++++.+.++.++
T Consensus        13 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~Dl~d~~~v~~~~~   79 (253)
T 2nm0_A           13 GLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-------------GFLAVKCDITDTEQVEQAYK   79 (253)
T ss_dssp             -------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTSHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-------------cceEEEecCCCHHHHHHHHH
Confidence            33445677999999999999999999999999999999999875432             25778899999888888778


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          135 AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++.+.++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        80 ~~~~~~g--~iD~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~  150 (253)
T 2nm0_A           80 EIEETHG--PVEVLIANAGVTKDQL--LMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGL  150 (253)
T ss_dssp             HHHHHTC--SCSEEEEECSCCTTTC-----CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCC
T ss_pred             HHHHHcC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhC
Confidence            8877776  6999999999875533  678899999999999999999999999999998888999999999874

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.95  E-value=7e-27  Score=184.46  Aligned_cols=140  Identities=29%  Similarity=0.434  Sum_probs=123.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEE-EecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~-~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ||+++||||++|||++++++|+++|++|++ .+|+++++++..++++..  +.++.++.+|++++.+.++.++++.+.++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999998 589988888888887765  45788899999998777777777777776


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                        ++|++|||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++
T Consensus        79 --~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~  141 (244)
T 1edo_A           79 --TIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG  141 (244)
T ss_dssp             --CCSEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             --CCCEEEECCCCCCCcC--cccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhh
Confidence              6999999999876543  67889999999999999999999999999999888899999999865

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.95  E-value=8.4e-27  Score=184.76  Aligned_cols=142  Identities=29%  Similarity=0.384  Sum_probs=124.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+|+++||||++|||++++++|+++|++|++++|+++++++..+++..   ..++.++.+|++++.+.++.++.+.+.+
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---cCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999999999888777666632   2468889999999887888778888777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCC-CEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK-GAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~-g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++. ++||++||.++.
T Consensus        81 ~--~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  146 (251)
T 1zk4_A           81 G--PVSTLVNNAGIAVNKS--VEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF  146 (251)
T ss_dssp             S--SCCEEEECCCCCCCCC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT
T ss_pred             C--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhc
Confidence            7  6999999999875533  678899999999999999999999999999988876 899999998764

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.95  E-value=6.3e-27  Score=186.76  Aligned_cols=149  Identities=21%  Similarity=0.326  Sum_probs=125.9

Q ss_pred             CCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           56 PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        56 ~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      ...+++.+|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.. +.++.++.+|++++.+.++.+++
T Consensus         7 ~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~   85 (265)
T 1h5q_A            7 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQ   85 (265)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHH
Confidence            34456779999999999999999999999999999999998776666666665432 45688899999998777777777


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      +.+.++  ++|++|||||.....+  +.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||.++.
T Consensus        86 ~~~~~~--~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~  156 (265)
T 1h5q_A           86 IDADLG--PISGLIANAGVSVVKP--ATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQ  156 (265)
T ss_dssp             HHHHSC--SEEEEEECCCCCCCSC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             HHHhcC--CCCEEEECCCcCCCCc--hhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhh
Confidence            777766  6999999999876544  67889999999999999999999999999998776 4899999998764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.95  E-value=3.6e-27  Score=208.48  Aligned_cols=140  Identities=26%  Similarity=0.394  Sum_probs=117.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++.+|+  .++++.+++++.  +.+.....+|++  .+.++.++++.+.
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~--g~~~~~~~~Dv~--~~~~~~~~~~~~~  392 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAA--GGEAWPDQHDVA--KDSEAIIKNVIDK  392 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHT--TCEEEEECCCHH--HHHHHHHHHHHHH
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhc--CCeEEEEEcChH--HHHHHHHHHHHHh
Confidence            5679999999999999999999999999999999874  245566677654  446667778883  1234556777777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||+....+  +.++++|+|+++|++|+.|+++++|+++|+|++++.|+|||+||.+|.
T Consensus       393 ~G--~iDiLVnNAGi~~~~~--~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~  458 (604)
T 2et6_A          393 YG--TIDILVNNAGILRDRS--FAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGI  458 (604)
T ss_dssp             HS--CCCEEEECCCCCCCBC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHH
T ss_pred             cC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence            87  6999999999876544  789999999999999999999999999999999888999999998774

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.95  E-value=5.9e-27  Score=186.96  Aligned_cols=145  Identities=23%  Similarity=0.374  Sum_probs=122.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhC-----CCceeEEEEEecccCccchhhHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN-----PNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~-----~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+     +..++.++.+|+++..+.++.++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            3568999999999999999999999999999999999988887776664432     11567889999999877788778


Q ss_pred             HHHHHhcCCCc-cEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEeccccc
Q 045749          135 AIEMAIDGLEV-GVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAA  208 (210)
Q Consensus       135 ~~~~~~~~~~i-d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag  208 (210)
                      .+.+.++  ++ |++|||||.....+  +.+.+.++|++.+++|+.|+++++++++|.|.+++ .|+||++||.++
T Consensus        84 ~~~~~~g--~i~d~vi~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  155 (264)
T 2pd6_A           84 QVQACFS--RPPSVVVSCAGITQDEF--LLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVG  155 (264)
T ss_dssp             HHHHHHS--SCCSEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHH
T ss_pred             HHHHHhC--CCCeEEEECCCcCCCcc--hhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhh
Confidence            8887777  57 99999999876543  67889999999999999999999999999998876 789999999865

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.95  E-value=2.3e-27  Score=190.38  Aligned_cols=133  Identities=25%  Similarity=0.346  Sum_probs=115.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|+.+++++             .....+|+++..+..+.++++.+.
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-------------~~~~~~Dv~~~~~~~~~~~~~~~~   91 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-------------DLHLPGDLREAAYADGLPGAVAAG   91 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-------------SEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-------------hhccCcCCCCHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999998654321             133467888887777777788888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        92 ~g--~iD~lvnnAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~  157 (266)
T 3uxy_A           92 LG--RLDIVVNNAGVISRGR--ITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGL  157 (266)
T ss_dssp             HS--CCCEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT
T ss_pred             cC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhC
Confidence            87  6999999999987644  778999999999999999999999999999999889999999999875

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.95  E-value=4.1e-27  Score=186.14  Aligned_cols=143  Identities=31%  Similarity=0.464  Sum_probs=111.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~-~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++|+++||||++|||++++++|+++|++|+++ +|+++++++..++++..  +.++.++.+|++++.+.++.++++.+.
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            568999999999999999999999999999998 67777888877777664  456888999999987777777888777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.++|++.+++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        81 ~~--~~d~vi~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  146 (247)
T 2hq1_A           81 FG--RIDILVNNAGITRDTL--MLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGI  146 (247)
T ss_dssp             HS--CCCEEEECC-----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC----
T ss_pred             cC--CCCEEEECCCCCCCCc--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc
Confidence            77  6999999999875433  667888999999999999999999999999998888999999998653

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.95  E-value=1.6e-27  Score=190.06  Aligned_cols=141  Identities=18%  Similarity=0.296  Sum_probs=111.5

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+.++..   +++     +.++.++++|++++.+.++.++.+.
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADL-----GDRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHT-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence            45677999999999999999999999999999999999755432   222     4578889999999987777777665


Q ss_pred             HHhcCCCccEEEEcCCCCCCCc--ccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh--------CCCCEEEEecccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKA--MFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR--------RKKGAIVNIGSGA  207 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~--------~~~g~iv~isS~a  207 (210)
                      + ++  ++|+||||||.....+  .+..+.+.++|++++++|+.|+++++++++|+|++        ++.|+||++||.+
T Consensus        76 ~-~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  152 (257)
T 3tl3_A           76 T-MG--TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVA  152 (257)
T ss_dssp             H-HS--CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC
T ss_pred             H-hC--CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchh
Confidence            5 65  6999999999864322  11235899999999999999999999999999988        5678999999998


Q ss_pred             cc
Q 045749          208 AI  209 (210)
Q Consensus       208 g~  209 (210)
                      +.
T Consensus       153 ~~  154 (257)
T 3tl3_A          153 AF  154 (257)
T ss_dssp             --
T ss_pred             hc
Confidence            75

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=7.4e-27  Score=187.70  Aligned_cols=139  Identities=18%  Similarity=0.301  Sum_probs=120.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++.      ...++++|++++.+.++.++++.+.
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP------GAVFILCDVTQEDDVKTLVSETIRR   79 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT------TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------CCeEEEcCCCCHHHHHHHHHHHHHH
Confidence            3569999999999999999999999999999999999988776655431      3678899999988888888888888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++  ++|++|||||..... .++.+.+.++|++++++|+.|+++++++++|+|+++ .|+||++||.++
T Consensus        80 ~g--~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~  144 (270)
T 1yde_A           80 FG--RLDCVVNNAGHHPPP-QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVG  144 (270)
T ss_dssp             HS--CCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHH
T ss_pred             cC--CCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccc
Confidence            87  699999999986531 236788999999999999999999999999999766 599999999865

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.95  E-value=1.5e-26  Score=183.27  Aligned_cols=144  Identities=26%  Similarity=0.311  Sum_probs=123.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +|+++||||++|||++++++|+++|++|++++|+++++++..+++.+.. +.++.++.+|++++.+.++.++++.+.++ 
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATMEQFG-   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhC-
Confidence            7899999999999999999999999999999999988888777762221 45688899999998888887888888877 


Q ss_pred             CCccEEEEcCCCCCCCc-ccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKA-MFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|++|||||.....+ ..+.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        80 -~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  146 (250)
T 2cfc_A           80 -AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASL  146 (250)
T ss_dssp             -CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             -CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhc
Confidence             6999999999864321 11567899999999999999999999999999998888999999998764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.95  E-value=1.2e-26  Score=190.66  Aligned_cols=141  Identities=25%  Similarity=0.450  Sum_probs=120.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe---------cChhHHHHHHHHHHhhCCCceeEEEEEecccCccc
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVS---------RNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVS  129 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~---------r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~  129 (210)
                      +++.||+++||||++|||+++|++|+++|++|++.+         |+.+++++..++++...  ..   ..+|+++..+.
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~--~~---~~~D~~~~~~~   79 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG--GK---AVANYDSVEAG   79 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT--CE---EEEECCCGGGH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC--Ce---EEEeCCCHHHH
Confidence            456799999999999999999999999999999964         56778888888887653  22   24799888777


Q ss_pred             hhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          130 AGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       130 ~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++.++++.+.++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++
T Consensus        80 ~~~~~~~~~~~g--~iD~lVnnAG~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~  154 (319)
T 1gz6_A           80 EKLVKTALDTFG--RIDVVVNNAGILRDRS--FSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG  154 (319)
T ss_dssp             HHHHHHHHHHTS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHHHHHHHHHcC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            777777777776  6999999999876543  67889999999999999999999999999999888899999999865

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.95  E-value=1.3e-26  Score=182.13  Aligned_cols=138  Identities=31%  Similarity=0.444  Sum_probs=120.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+|+++||||++|||++++++|+++|++|++++|+++++++..+++.      ++..+.+|++++.+.++.++.+.+.++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE------GALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST------TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh------hceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999888776655431      567788999998777777778877776


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                        ++|++|||||.....+  +.+.+.++|++.+++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        78 --~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  141 (234)
T 2ehd_A           78 --ELSALVNNAGVGVMKP--VHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGK  141 (234)
T ss_dssp             --CCCEEEECCCCCCCSC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTT
T ss_pred             --CCCEEEECCCcCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhc
Confidence              6999999999875543  678899999999999999999999999999998888999999998764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.95  E-value=2.5e-26  Score=181.32  Aligned_cols=132  Identities=23%  Similarity=0.341  Sum_probs=115.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +|+++||||++|||+++|++|+++|++|++++|++++.   .+++     +  ...+.+|+++ .+.++.++++.+.++ 
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~-----~--~~~~~~D~~~-~~~~~~~~~~~~~~g-   69 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL-----G--AVPLPTDLEK-DDPKGLVKRALEALG-   69 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH-----T--CEEEECCTTT-SCHHHHHHHHHHHHT-
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh-----C--cEEEecCCch-HHHHHHHHHHHHHcC-
Confidence            68999999999999999999999999999999998662   2233     2  6678899999 778888888888887 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|++|||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        70 -~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  133 (239)
T 2ekp_A           70 -GLHVLVHAAAVNVRKP--ALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTF  133 (239)
T ss_dssp             -SCCEEEECCCCCCCCC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             -CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhc
Confidence             6999999999876543  778999999999999999999999999999998888999999998874

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.95  E-value=7.7e-27  Score=189.95  Aligned_cols=144  Identities=11%  Similarity=0.115  Sum_probs=121.4

Q ss_pred             cccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           59 LKSYGSWALITGATD--GIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        59 ~~~~gk~vlITGass--GiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      .++.||+++||||+|  |||+++|++|+++|++|++++|+++..+...+...+.   ....++++|++++.+.++.++++
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~  102 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL---GVKLTVPCDVSDAESVDNMFKVL  102 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH---TCCEEEECCTTCHHHHHHHHHHH
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHHHHHH
Confidence            446799999999996  9999999999999999999999976655554444433   23578899999998888888888


Q ss_pred             HHHhcCCCccEEEEcCCCCCCC--cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPK--AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+.++  ++|+||||||+....  ..++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++.
T Consensus       103 ~~~~g--~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~  173 (296)
T 3k31_A          103 AEEWG--SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAE  173 (296)
T ss_dssp             HHHHS--CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGT
T ss_pred             HHHcC--CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhc
Confidence            88887  699999999987531  123678999999999999999999999999999865  6999999998874

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=7.6e-27  Score=185.01  Aligned_cols=134  Identities=26%  Similarity=0.392  Sum_probs=113.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++.. ++      .++.++.+|++++    +.++++.+.+
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~------~~~~~~~~D~~~~----~~~~~~~~~~   72 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY------PGIQTRVLDVTKK----KQIDQFANEV   72 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS------TTEEEEECCTTCH----HHHHHHHHHC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc------cCceEEEeeCCCH----HHHHHHHHHh
Confidence            46899999999999999999999999999999999987765443 21      2567788888876    3344555556


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|++|||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        73 ~--~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  137 (246)
T 2ag5_A           73 E--RLDVLFNVAGFVHHGT--VLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS  137 (246)
T ss_dssp             S--CCSEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT
T ss_pred             C--CCCEEEECCccCCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhC
Confidence            5  6999999999876543  778899999999999999999999999999998888999999998764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.94  E-value=1e-26  Score=184.54  Aligned_cols=135  Identities=26%  Similarity=0.359  Sum_probs=113.4

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ..++.+|+++||||++|||+++|++|+++|++|++++|+++++++             ...+.+|++++++.++.++++.
T Consensus        10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~D~~~~~~~~~~~~~~~   76 (247)
T 1uzm_A           10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-------------LFGVEVDVTDSDAVDRAFTAVE   76 (247)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------------SEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-------------hcCeeccCCCHHHHHHHHHHHH
Confidence            345679999999999999999999999999999999998764322             1137789998877777778888


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|++|||||.....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        77 ~~~g--~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  144 (247)
T 1uzm_A           77 EHQG--PVEVLVSNAGLSADAF--LMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL  144 (247)
T ss_dssp             HHHS--SCSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-
T ss_pred             HHcC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhc
Confidence            7777  6999999999875533  678999999999999999999999999999998888999999999764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.94  E-value=1.5e-26  Score=183.76  Aligned_cols=134  Identities=22%  Similarity=0.306  Sum_probs=116.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|+++.         +   ...+..+.+|++++++.++.++++.+.
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~---~~~~~~~~~D~~d~~~~~~~~~~~~~~   71 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------E---QYPFATEVMDVADAAQVAQVCQRLLAE   71 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------S---CCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------h---cCCceEEEcCCCCHHHHHHHHHHHHHH
Confidence            4569999999999999999999999999999999998652         1   112677889999987777777787777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        72 ~g--~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~  137 (250)
T 2fwm_X           72 TE--RLDALVNAAGILRMGA--TDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAH  137 (250)
T ss_dssp             CS--CCCEEEECCCCCCCCC--TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             cC--CCCEEEECCCcCCCCC--cccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhC
Confidence            76  6999999999876543  778899999999999999999999999999998888999999999874

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=2.6e-26  Score=186.93  Aligned_cols=146  Identities=26%  Similarity=0.406  Sum_probs=126.7

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhC---CCceeEEEEEecccCccchhhHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN---PNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~---~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      +.++.||+++||||++|||+++|++|+++|++|++++|+.+++++..++++...   .+.++.++.+|++++.+.++.++
T Consensus        13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   92 (303)
T 1yxm_A           13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK   92 (303)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence            335679999999999999999999999999999999999999988888887631   24578899999999888888788


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          135 AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      .+.+.++  ++|++|||||.....+  +.+.+.++|++++++|+.|+++++++++|.+.+++.|+||++||.+
T Consensus        93 ~~~~~~g--~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~  161 (303)
T 1yxm_A           93 STLDTFG--KINFLVNNGGGQFLSP--AEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT  161 (303)
T ss_dssp             HHHHHHS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC
T ss_pred             HHHHHcC--CCCEEEECCCCCCCCc--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec
Confidence            8888887  6999999999765433  6788999999999999999999999999977666679999999975

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.94  E-value=1.3e-26  Score=186.63  Aligned_cols=145  Identities=21%  Similarity=0.250  Sum_probs=125.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++++|+++||||++|||++++++|+++|++|++++|++++.++..+++...  +.++.++.+|++++.+.++.++++.+.
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999988877777776654  456888999999987777777888777


Q ss_pred             hcCCCccEEEEcCCCCCCCccccc-CCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFH-EVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||..... .++. +.+.++|++.+++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus       109 ~g--~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~  176 (279)
T 3ctm_A          109 FG--TIDVFVANAGVTWTQ-GPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGK  176 (279)
T ss_dssp             HS--CCSEEEECGGGSTTC---CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTS
T ss_pred             hC--CCCEEEECCcccccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhc
Confidence            76  699999999986541 2255 7788999999999999999999999999998888999999998764

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.94  E-value=3e-26  Score=186.38  Aligned_cols=146  Identities=20%  Similarity=0.324  Sum_probs=126.9

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ..++.||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++.+|++++.+.++.++.+.
T Consensus        21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHHH
Confidence            345779999999999999999999999999999999999999888888886642 3468889999999877777777777


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhH-hCCCCEEEEeccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMM-RRKKGAIVNIGSGAA  208 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~-~~~~g~iv~isS~ag  208 (210)
                      +.++  ++|++|||||.....+  +.+.+.++|++.+++|+.|++++++.++|.|. +++.++||++||.++
T Consensus       100 ~~~g--~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~  167 (302)
T 1w6u_A          100 KVAG--HPNIVINNAAGNFISP--TERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA  167 (302)
T ss_dssp             HHTC--SCSEEEECCCCCCCSC--GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHH
T ss_pred             HHcC--CCCEEEECCCCCCCCc--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccc
Confidence            7776  6999999999865543  67889999999999999999999999999997 455689999999875

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.94  E-value=1.5e-26  Score=182.52  Aligned_cols=140  Identities=27%  Similarity=0.431  Sum_probs=122.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecChhHHHHHHHHHHhhCCCceeEE-EEEecccCccchhhHHHHHHHh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINI-VEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~-~r~~~~l~~~~~~l~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +|+++||||++|||++++++|+++|++|+++ +|+++++++..++++..  +.++.. +.+|+++..+.++.++++.+.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR--GSPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT--TCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999998 89998888888877664  334555 8899999877777778887777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +  ++|++|||||.....+  +.+.+.++|++.+++|+.|++++++.++|.|++++.|+||++||.++
T Consensus        79 ~--~~d~li~~Ag~~~~~~--~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~  142 (245)
T 2ph3_A           79 G--GLDTLVNNAGITRDTL--LVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVG  142 (245)
T ss_dssp             T--CCCEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             C--CCCEEEECCCCCCCCC--cccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhh
Confidence            7  6999999999875533  67889999999999999999999999999999888899999999865

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.94  E-value=2.1e-26  Score=183.81  Aligned_cols=142  Identities=23%  Similarity=0.292  Sum_probs=123.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++.+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++++.+.++.++++.+
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKG   82 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999999998887776665     34678899999998888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCccccc------CCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC------CCCEEEEeccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFH------EVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR------KKGAIVNIGSG  206 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~------~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~------~~g~iv~isS~  206 (210)
                      .++  ++|+||||||.....+  +.      +.+.++|++.+++|+.|+++++++++|.|+++      +.|+||++||.
T Consensus        83 ~~g--~id~li~~Ag~~~~~~--~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~  158 (265)
T 2o23_A           83 KFG--RVDVAVNCAGIAVASK--TYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV  158 (265)
T ss_dssp             HHS--CCCEEEECCCCCCCCC--SEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred             HCC--CCCEEEECCccCCCCc--cccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCCh
Confidence            877  6999999999875532  22      37899999999999999999999999999887      67999999998


Q ss_pred             ccc
Q 045749          207 AAI  209 (210)
Q Consensus       207 ag~  209 (210)
                      ++.
T Consensus       159 ~~~  161 (265)
T 2o23_A          159 AAF  161 (265)
T ss_dssp             HHH
T ss_pred             hhc
Confidence            753

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.94  E-value=2.7e-26  Score=183.72  Aligned_cols=146  Identities=14%  Similarity=0.158  Sum_probs=122.7

Q ss_pred             cccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           59 LKSYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        59 ~~~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ++++||+++||||+  +|||+++|++|+++|++|++++|++...+.. +++.+..+..++.++++|++++.+.++.++++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSV-HELAGTLDRNDSIILPCDVTNDAEIETCFASI   81 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHH-HHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence            35679999999999  7799999999999999999999997554444 34444443457899999999998888888888


Q ss_pred             HHHhcCCCccEEEEcCCCCCCC--cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPK--AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+.++  ++|++|||||.....  ...+.+.+.++|++++++|+.|+++++++++|+|++  +|+||++||.++.
T Consensus        82 ~~~~g--~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~  152 (266)
T 3oig_A           82 KEQVG--VIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGE  152 (266)
T ss_dssp             HHHHS--CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGT
T ss_pred             HHHhC--CeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEeccccc
Confidence            88887  699999999987521  133678899999999999999999999999998853  5899999999875

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.94  E-value=3.2e-26  Score=186.05  Aligned_cols=143  Identities=14%  Similarity=0.174  Sum_probs=119.1

Q ss_pred             ccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           60 KSYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        60 ~~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ++.||+++||||+  +|||+++|++|+++|++|++++|+++..+. .+++.+..  .++.++++|++++.+.++.++++.
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKR-VEPLAEEL--GAFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHH-HHHHHHHH--TCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhc--CCceEEECCCCCHHHHHHHHHHHH
Confidence            4679999999999  569999999999999999999999654433 34443332  357889999999988888888888


Q ss_pred             HHhcCCCccEEEEcCCCCCCC--cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPK--AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|+||||||+....  ..++.+.+.++|++++++|+.|+++++++++|+|++  .|+||++||.++.
T Consensus       105 ~~~g--~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~  174 (293)
T 3grk_A          105 KKWG--KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAE  174 (293)
T ss_dssp             HHTS--CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGT
T ss_pred             HhcC--CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhc
Confidence            8887  699999999987521  133678999999999999999999999999999864  6999999998875

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.94  E-value=4.2e-26  Score=184.02  Aligned_cols=143  Identities=18%  Similarity=0.292  Sum_probs=119.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .++.||+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++++|++++.+.++.++.+ +
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~-~   99 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIEAA-N   99 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH-T
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHH-H
Confidence            4577999999999999999999999999999999999999988887776     456888999999886666655555 4


Q ss_pred             HhcCCCccEEEEc-CCCCCCCccc---ccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh------CCCCEEEEeccccc
Q 045749          139 AIDGLEVGVLINN-VGITYPKAMF---FHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR------RKKGAIVNIGSGAA  208 (210)
Q Consensus       139 ~~~~~~id~lvnn-Ag~~~~~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~------~~~g~iv~isS~ag  208 (210)
                      .++  ++|++||| ||........   ..+.+.++|++++++|+.|++++++.++|.|.+      ++.|+||++||.++
T Consensus       100 ~~~--~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  177 (281)
T 3ppi_A          100 QLG--RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAG  177 (281)
T ss_dssp             TSS--EEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGG
T ss_pred             HhC--CCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccc
Confidence            443  79999999 5554432210   136789999999999999999999999999987      56789999999987


Q ss_pred             c
Q 045749          209 I  209 (210)
Q Consensus       209 ~  209 (210)
                      .
T Consensus       178 ~  178 (281)
T 3ppi_A          178 Y  178 (281)
T ss_dssp             T
T ss_pred             c
Confidence            5

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.94  E-value=8.7e-26  Score=182.64  Aligned_cols=143  Identities=20%  Similarity=0.243  Sum_probs=123.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+ ..++.++.+|++++.+.++.++++.+.
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999999998888887653 347888999999987777777777777


Q ss_pred             hcCCCccEEEEc-CCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINN-VGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnn-Ag~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++||| ||.... +  +.+.+.+++++++++|+.|+++++++++|.|+++ .|+||++||.++.
T Consensus       104 ~g--~iD~li~naag~~~~-~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~  168 (286)
T 1xu9_A          104 MG--GLDMLILNHITNTSL-N--LFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGK  168 (286)
T ss_dssp             HT--SCSEEEECCCCCCCC-C--CCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGT
T ss_pred             cC--CCCEEEECCccCCCC-c--cccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccc
Confidence            77  69999999 576533 2  4466899999999999999999999999998765 4999999999875

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.94  E-value=2.4e-26  Score=182.60  Aligned_cols=142  Identities=23%  Similarity=0.315  Sum_probs=124.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~-~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.+|+++||||++|||++++++|+++|++|++++|+ ++++++..++++..  +.++.++.+|++++.+.++.++++.+.
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFVAK   82 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999 88888888887764  457889999999988888888888888


Q ss_pred             hcCCCccEEEEcCCC-CCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC--C---CEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGI-TYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK--K---GAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~-~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~--~---g~iv~isS~ag  208 (210)
                      ++  ++|++|||||. ....  ++.+.+.++|++++++|+.|+++++++++|.|++++  .   ++||++||.++
T Consensus        83 ~g--~id~vi~~Ag~~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  153 (258)
T 3afn_B           83 FG--GIDVLINNAGGLVGRK--PLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAG  153 (258)
T ss_dssp             HS--SCSEEEECCCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHH
T ss_pred             cC--CCCEEEECCCCcCCcC--ccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhh
Confidence            76  69999999997 4433  367889999999999999999999999999997654  3   89999999875

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.94  E-value=1.4e-26  Score=184.01  Aligned_cols=143  Identities=25%  Similarity=0.335  Sum_probs=122.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~-~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++||+++||||++|||+++|++|+++|++|+++ +|+.+++++..+++.+.  +.++..+.+|+++..+.++.++.+.+.
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999885 77788888888888765  567888999999887777777777666


Q ss_pred             hcC----CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDG----LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~----~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++.    .++|++|||||+....+  +.+.+.++|++++++|+.|++++++.++|+|  ++.|+||++||.++.
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~~~iv~isS~~~~  152 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAF--IEETTEQFFDRMVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATR  152 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHTTTE--EEEEEEEEECCGGGT
T ss_pred             hcccccCCcccEEEECCCCCCCCC--hhhCCHHHHHHHHhhhchHHHHHHHHHHHhh--CCCCEEEEeCChhhc
Confidence            542    25999999999876543  7789999999999999999999999999998  345899999999875

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.94  E-value=9.5e-27  Score=206.31  Aligned_cols=146  Identities=24%  Similarity=0.418  Sum_probs=111.8

Q ss_pred             CCCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec---------ChhHHHHHHHHHHhhCCCceeEEEEEeccc
Q 045749           55 QPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR---------NHNKLEKISNEIQAENPNTQINIVEYDFSC  125 (210)
Q Consensus        55 ~~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r---------~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~  125 (210)
                      +....++.||+++||||++|||+++|++|+++|++|++++|         +.++++++.++++...  ..   ..+|+++
T Consensus        11 ~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~--~~---~~~D~~d   85 (613)
T 3oml_A           11 SDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG--GE---AVADYNS   85 (613)
T ss_dssp             ----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTT--CC---EEECCCC
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhC--Ce---EEEEeCC
Confidence            33456678999999999999999999999999999999988         7777888888887653  22   2378888


Q ss_pred             CccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecc
Q 045749          126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS  205 (210)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS  205 (210)
                      ..+.++.++++.+.++  ++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||
T Consensus        86 ~~~~~~~~~~~~~~~g--~iDiLVnnAGi~~~~~--~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS  161 (613)
T 3oml_A           86 VIDGAKVIETAIKAFG--RVDILVNNAGILRDRS--LVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSS  161 (613)
T ss_dssp             GGGHHHHHC------------CEECCCCCCCCCC--STTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHCC--CCcEEEECCCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            8766776777777766  6999999999986644  78999999999999999999999999999999999999999999


Q ss_pred             cccc
Q 045749          206 GAAI  209 (210)
Q Consensus       206 ~ag~  209 (210)
                      .+|.
T Consensus       162 ~a~~  165 (613)
T 3oml_A          162 NSGI  165 (613)
T ss_dssp             HHHH
T ss_pred             HHHc
Confidence            8764

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.94  E-value=3.4e-26  Score=185.05  Aligned_cols=143  Identities=21%  Similarity=0.207  Sum_probs=120.0

Q ss_pred             cCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +.||+++||||+  +|||+++|++|+++|++|++++|+++ .++..+++.+..+  .+.++.+|++++.+.++.++++.+
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~   95 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLEE   95 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHH
Confidence            679999999999  99999999999999999999999985 4555566655432  367889999998888887888888


Q ss_pred             HhcCCCccEEEEcCCCCCCC--cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPK--AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||.....  ..++.+.+.++|++++++|+.|+++++++++|.|+++ .|+||++||.++.
T Consensus        96 ~~g--~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~  165 (285)
T 2p91_A           96 NWG--SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAE  165 (285)
T ss_dssp             HTS--CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGT
T ss_pred             HcC--CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhc
Confidence            776  699999999986531  1236688999999999999999999999999999765 5999999998764

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.94  E-value=4e-26  Score=180.68  Aligned_cols=132  Identities=13%  Similarity=0.093  Sum_probs=112.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-e--cChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILV-S--RNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~-~--r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ||+++||||++|||+++|++|+++|++|+++ +  |+++++++..+++  .  +       .|+.++.+.++.++++.+.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~--~-------~~~~~~~~v~~~~~~~~~~   69 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--P--G-------TIALAEQKPERLVDATLQH   69 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--T--T-------EEECCCCCGGGHHHHHGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--C--C-------CcccCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999 6  9998887776655  1  2       2333666677777777777


Q ss_pred             hcCCCccEEEEcCCCCCC---CcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYP---KAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~---~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||....   .+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        70 ~g--~iD~lv~~Ag~~~~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~  138 (244)
T 1zmo_A           70 GE--AIDTIVSNDYIPRPMNRLP--LEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGK  138 (244)
T ss_dssp             SS--CEEEEEECCCCCTTGGGCC--STTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred             cC--CCCEEEECCCcCCCCCCCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhC
Confidence            66  69999999998754   33  778999999999999999999999999999999888999999998875

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.94  E-value=4.9e-26  Score=181.21  Aligned_cols=134  Identities=19%  Similarity=0.199  Sum_probs=113.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||++|||+++|++|+++|++|++++|+++++++..+ ++...  .++..+     ++.+.++.++++.+.++  
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~--~~~~~~-----d~~~v~~~~~~~~~~~g--   71 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETY--PQLKPM-----SEQEPAELIEAVTSAYG--   71 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHC--TTSEEC-----CCCSHHHHHHHHHHHHS--
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcC--CcEEEE-----CHHHHHHHHHHHHHHhC--
Confidence            689999999999999999999999999999999988877665 65542  233222     55566777778888877  


Q ss_pred             CccEEEEcCCCC-CCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          144 EVGVLINNVGIT-YPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|+||||||.. ...  ++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        72 ~iD~lv~nAg~~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  136 (254)
T 1zmt_A           72 QVDVLVSNDIFAPEFQ--PIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPF  136 (254)
T ss_dssp             CCCEEEEECCCCCCCC--CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTT
T ss_pred             CCCEEEECCCcCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccc
Confidence            699999999987 443  3678999999999999999999999999999998888999999998875

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.94  E-value=5.9e-26  Score=181.97  Aligned_cols=145  Identities=21%  Similarity=0.229  Sum_probs=125.4

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      ...++++|+++||||++|||++++++|+++|++|++++| +++++++..++++..  +.++.++.+|++++.+.++.+++
T Consensus        15 ~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~   92 (274)
T 1ja9_A           15 ASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDK   92 (274)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHH
Confidence            345577999999999999999999999999999999999 888888888887764  45678899999998777777777


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.+.++  ++|++|||||.....+  +.+.+.++|++.+++|+.|+++++++++|.|+ ++ |+||++||.++.
T Consensus        93 ~~~~~~--~~d~vi~~Ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~-~~iv~~sS~~~~  160 (274)
T 1ja9_A           93 AVSHFG--GLDFVMSNSGMEVWCD--ELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-RG-GRIILTSSIAAV  160 (274)
T ss_dssp             HHHHHS--CEEEEECCCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-EE-EEEEEECCGGGT
T ss_pred             HHHHcC--CCCEEEECCCCCCCcc--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hC-CEEEEEcChHhc
Confidence            877777  6999999999876543  67889999999999999999999999999987 33 899999998764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.94  E-value=2.3e-26  Score=185.12  Aligned_cols=142  Identities=14%  Similarity=0.172  Sum_probs=119.2

Q ss_pred             cCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +.||+++||||+  +|||+++|++|+++|++|++++|+++ .++..+++.+..+  .+.++++|++++.+.++.++++.+
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~   80 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVKK   80 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHHH
Confidence            458999999999  99999999999999999999999986 5555566655432  367889999998888887788877


Q ss_pred             HhcCCCccEEEEcCCCCCCC--cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPK--AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||.....  ..++.+.+.++|++++++|+.|+++++++++|.|++  .|+||++||.++.
T Consensus        81 ~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~  149 (275)
T 2pd4_A           81 DLG--SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGST  149 (275)
T ss_dssp             HTS--CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGT
T ss_pred             HcC--CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhc
Confidence            776  699999999987531  123678899999999999999999999999999864  4899999998764

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=3.7e-26  Score=183.05  Aligned_cols=137  Identities=26%  Similarity=0.380  Sum_probs=118.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+...+.++.++.+|++++.+.++.++.+.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999998888877777654334568889999999888888888888888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC---CCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK---KGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~---~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||...          .++|++.+++|+.|++.+++.++|.|++++   .|+||++||.++.
T Consensus        85 g--~id~lv~~Ag~~~----------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  144 (267)
T 2gdz_A           85 G--RLDILVNNAGVNN----------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL  144 (267)
T ss_dssp             S--CCCEEEECCCCCC----------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred             C--CCCEEEECCCCCC----------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCcccc
Confidence            7  6999999999642          356889999999999999999999997764   6899999999875

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.94  E-value=2.8e-26  Score=183.65  Aligned_cols=148  Identities=15%  Similarity=0.119  Sum_probs=120.2

Q ss_pred             CCCCcccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhh
Q 045749           55 QPKNLKSYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGN  132 (210)
Q Consensus        55 ~~~~~~~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~  132 (210)
                      ++.....++|+++||||+  +|||+++|++|+++|++|++++|++... +..+++.+..  .++.++.+|++++.+.++.
T Consensus         6 ~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~   82 (271)
T 3ek2_A            6 HHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEF--GSELVFPCDVADDAQIDAL   82 (271)
T ss_dssp             ---CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHHT--TCCCEEECCTTCHHHHHHH
T ss_pred             CCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH-HHHHHHHHHc--CCcEEEECCCCCHHHHHHH
Confidence            334556779999999998  9999999999999999999999995443 3444554443  2478899999999888888


Q ss_pred             HHHHHHHhcCCCccEEEEcCCCCCCCc--ccccC-CCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          133 IKAIEMAIDGLEVGVLINNVGITYPKA--MFFHE-VDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       133 ~~~~~~~~~~~~id~lvnnAg~~~~~~--~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++++.+.++  ++|+||||||+.....  ..+.+ .+.++|++++++|+.|+++++++++|+|++  .|+||++||.++.
T Consensus        83 ~~~~~~~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~  158 (271)
T 3ek2_A           83 FASLKTHWD--SLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAE  158 (271)
T ss_dssp             HHHHHHHCS--CEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGT
T ss_pred             HHHHHHHcC--CCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccc
Confidence            888888876  6999999999876411  22445 899999999999999999999999998864  5899999998874

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.94  E-value=5.2e-26  Score=183.58  Aligned_cols=143  Identities=15%  Similarity=0.142  Sum_probs=119.7

Q ss_pred             ccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           60 KSYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        60 ~~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      +++||+++||||+  +|||+++|++|+++|++|++++|++  .++..+++.+..  .++.++.+|++++.+.++.++++.
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~   98 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF--NPAAVLPCDVISDQEIKDLFVELG   98 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG--CCSEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc--CCceEEEeecCCHHHHHHHHHHHH
Confidence            4679999999988  8899999999999999999999987  344455565543  347889999999988888888888


Q ss_pred             HHhcCCCccEEEEcCCCCCCCc--ccccC-CCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKA--MFFHE-VDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~--~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|+||||||......  ..+.+ .+.++|++++++|+.|+++++++++|.|+++ .|+||++||.++.
T Consensus        99 ~~~g--~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~  170 (280)
T 3nrc_A           99 KVWD--GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAE  170 (280)
T ss_dssp             HHCS--SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGT
T ss_pred             HHcC--CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccc
Confidence            8876  6999999999875421  22444 8999999999999999999999999998766 6999999998875

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.94  E-value=1.1e-25  Score=179.97  Aligned_cols=151  Identities=23%  Similarity=0.269  Sum_probs=122.3

Q ss_pred             CCCCcccCCcEEEEEcCCChHHHHHHHHHHHcC---CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchh
Q 045749           55 QPKNLKSYGSWALITGATDGIGKAFAHQLAQHG---LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAG  131 (210)
Q Consensus        55 ~~~~~~~~gk~vlITGassGiG~~~a~~l~~~G---~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~  131 (210)
                      .+.+..+.+|+++||||++|||+++|++|+++|   ++|++++|+.++++++ +++.+.  +.++.++.+|++++++.++
T Consensus        13 ~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~--~~~~~~~~~Dl~~~~~v~~   89 (267)
T 1sny_A           13 GLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN--HSNIHILEIDLRNFDAYDK   89 (267)
T ss_dssp             -------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH--CTTEEEEECCTTCGGGHHH
T ss_pred             cccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc--CCceEEEEecCCChHHHHH
Confidence            344555779999999999999999999999999   9999999998766544 444443  4468889999999988888


Q ss_pred             hHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC------C-----CCEE
Q 045749          132 NIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR------K-----KGAI  200 (210)
Q Consensus       132 ~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~------~-----~g~i  200 (210)
                      .++++.+.++..++|++|||||.... ..++.+.+.+++++.+++|+.|+++++++++|.|+++      +     .|+|
T Consensus        90 ~~~~~~~~~g~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  168 (267)
T 1sny_A           90 LVADIEGVTKDQGLNVLFNNAGIAPK-SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAI  168 (267)
T ss_dssp             HHHHHHHHHGGGCCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEE
T ss_pred             HHHHHHHhcCCCCccEEEECCCcCCC-ccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceE
Confidence            88888887763359999999998762 1336788999999999999999999999999999876      3     6899


Q ss_pred             EEecccccc
Q 045749          201 VNIGSGAAI  209 (210)
Q Consensus       201 v~isS~ag~  209 (210)
                      |++||.++.
T Consensus       169 v~isS~~~~  177 (267)
T 1sny_A          169 INMSSILGS  177 (267)
T ss_dssp             EEECCGGGC
T ss_pred             EEEeccccc
Confidence            999998774

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.94  E-value=3.4e-26  Score=182.82  Aligned_cols=143  Identities=16%  Similarity=0.209  Sum_probs=119.2

Q ss_pred             ccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           60 KSYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        60 ~~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ++.||+++||||+  +|||+++|++|+++|++|++++|+++ .++..+++.+..+  .+.++++|++++.+.++.++++.
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   81 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG--GALLFRADVTQDEELDALFAGVK   81 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHHHHH
Confidence            4569999999999  99999999999999999999999975 4445555655432  36788999999888888888888


Q ss_pred             HHhcCCCccEEEEcCCCCCCC--cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPK--AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.++  ++|+||||||.....  ..++.+.+.++|++++++|+.|+++++++++|.|++  .|+||++||.++.
T Consensus        82 ~~~g--~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~  151 (261)
T 2wyu_A           82 EAFG--GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASE  151 (261)
T ss_dssp             HHHS--SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGT
T ss_pred             HHcC--CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEeccccc
Confidence            8887  699999999986430  123668899999999999999999999999999853  4899999998764

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.94  E-value=9e-26  Score=177.05  Aligned_cols=133  Identities=21%  Similarity=0.324  Sum_probs=111.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|+++.    +.++++.+...+ 
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~----~~v~~~~~~~~~-   71 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASH----QEVEQLFEQLDS-   71 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCH----HHHHHHHHSCSS-
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCH----HHHHHHHHHHhh-
Confidence            57999999999999999999999999999999999888776655     45677888888876    334455444443 


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ..|++|||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++ ++||++||.++.
T Consensus        72 ~~d~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~  134 (230)
T 3guy_A           72 IPSTVVHSAGSGYFGL--LQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQ  134 (230)
T ss_dssp             CCSEEEECCCCCCCSC--GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGT
T ss_pred             cCCEEEEeCCcCCCCc--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccC
Confidence            3599999999876544  77899999999999999999999999999997765 599999998875

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.94  E-value=1.1e-25  Score=178.99  Aligned_cols=136  Identities=27%  Similarity=0.388  Sum_probs=113.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccC-ccchhhHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD-VVSAGNIKAIE  137 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~  137 (210)
                      +++||+++||||++|||+++|++|+++|++ |++++|+++.  +..+++.+..++.++.++.+|++++ .+.++.++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            356899999999999999999999999997 9999998642  2234454444456788999999988 77888788888


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC---CCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK---KGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~---~g~iv~isS~ag~  209 (210)
                      +.++  ++|++|||||..          +.++|++++++|+.|+++++++++|.|.+++   .|+||++||.++.
T Consensus        80 ~~~g--~id~lv~~Ag~~----------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~  142 (254)
T 1sby_A           80 DQLK--TVDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF  142 (254)
T ss_dssp             HHHS--CCCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred             HhcC--CCCEEEECCccC----------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhc
Confidence            8887  699999999963          3466889999999999999999999997764   5899999998874

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.93  E-value=2.6e-26  Score=189.31  Aligned_cols=141  Identities=25%  Similarity=0.328  Sum_probs=113.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh----CCCceeEEEEEecccCccchhhHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAE----NPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +|+++||||++|||+++|++|+++|++|++++|+..++++..+.++..    .++.++.++.+|++++.+.++.++++  
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~--   79 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV--   79 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH--
Confidence            789999999999999999999999999998888755544433333221    12357888999998875444443333  


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                        ...++|+||||||+....+  +.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.
T Consensus        80 --~~g~iD~lVnnAG~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~  146 (327)
T 1jtv_A           80 --TEGRVDVLVCNAGLGLLGP--LEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL  146 (327)
T ss_dssp             --TTSCCSEEEECCCCCCCSC--GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT
T ss_pred             --hcCCCCEEEECCCcCCCCc--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc
Confidence              2237999999999875543  678899999999999999999999999999998888999999999875

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.93  E-value=4.3e-25  Score=175.38  Aligned_cols=135  Identities=23%  Similarity=0.346  Sum_probs=106.9

Q ss_pred             cCCCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhH
Q 045749           54 RQPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNI  133 (210)
Q Consensus        54 ~~~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~  133 (210)
                      .++....++||+++||||++|||+++|++|+++|++|++++|+++.++    ++     + ....+ +|+  +    +.+
T Consensus        10 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~-----~-~~~~~-~D~--~----~~~   72 (249)
T 1o5i_A           10 HHHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS-----G-HRYVV-CDL--R----KDL   72 (249)
T ss_dssp             ------CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT-----C-SEEEE-CCT--T----TCH
T ss_pred             hhhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh-----C-CeEEE-eeH--H----HHH
Confidence            344455678999999999999999999999999999999999974322    11     2 34555 787  2    224


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          134 KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       134 ~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.+.+...  ++|++|||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.
T Consensus        73 ~~~~~~~~--~iD~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  144 (249)
T 1o5i_A           73 DLLFEKVK--EVDILVLNAGGPKAGF--FDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVI  144 (249)
T ss_dssp             HHHHHHSC--CCSEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HHHHHHhc--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhc
Confidence            45555554  6999999999875543  778999999999999999999999999999998888999999998874

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=1.8e-25  Score=176.47  Aligned_cols=142  Identities=19%  Similarity=0.307  Sum_probs=120.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++|+++||||++|||++++++|+++|  ++|++++|+.++++++.+    . .+.++.++.+|++++.+.++.++++.+.
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I-KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C-CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----c-cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999  999999999887765432    1 2557889999999987777777778777


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC------C-----CCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR------K-----KGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~------~-----~g~iv~isS~ag  208 (210)
                      ++..++|++|||||...+ ..++.+.+.+++++++++|+.|+++++++++|.|.++      +     .++||++||.++
T Consensus        77 ~g~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  155 (250)
T 1yo6_A           77 VGSDGLSLLINNAGVLLS-YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HGGGCCCEEEECCCCCCC-BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             cCCCCCcEEEECCcccCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence            762259999999998762 2336788999999999999999999999999999876      5     799999999877


Q ss_pred             c
Q 045749          209 I  209 (210)
Q Consensus       209 ~  209 (210)
                      .
T Consensus       156 ~  156 (250)
T 1yo6_A          156 S  156 (250)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.93  E-value=5.6e-26  Score=181.87  Aligned_cols=142  Identities=15%  Similarity=0.145  Sum_probs=115.7

Q ss_pred             cCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +.||+++||||+  +|||+++|++|+++|++|++++|++ +.++..+++.+..+.  ..++++|++++.+.++.++++.+
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~--~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS--DIVLQCDVAEDASIDTMFAELGK   83 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTC--CCEEECCTTCHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCC--cEEEEccCCCHHHHHHHHHHHHH
Confidence            568999999999  9999999999999999999999987 455555666554322  36788999988777766666666


Q ss_pred             HhcCCCccEEEEcCCCCCCC--cccccC-CCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPK--AMFFHE-VDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~--~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||.....  ..++.+ .+.++|++++++|+.|+++++++++|.|++  .|+||++||.++.
T Consensus        84 ~~g--~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~  153 (265)
T 1qsg_A           84 VWP--KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAE  153 (265)
T ss_dssp             TCS--SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGT
T ss_pred             HcC--CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhc
Confidence            655  799999999986531  123567 899999999999999999999999999864  4899999998764

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.93  E-value=1.8e-26  Score=190.40  Aligned_cols=143  Identities=14%  Similarity=0.175  Sum_probs=113.1

Q ss_pred             CcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecChh---------HHHHHHHHHHhh-CCCceeEEEEEecccC--c-
Q 045749           63 GSWALITGATD--GIGKAFAHQLAQHGLNLILVSRNHN---------KLEKISNEIQAE-NPNTQINIVEYDFSCD--V-  127 (210)
Q Consensus        63 gk~vlITGass--GiG~~~a~~l~~~G~~Vi~~~r~~~---------~l~~~~~~l~~~-~~~~~~~~~~~D~~~~--~-  127 (210)
                      +|+++||||++  |||+++|++|+++|++|++++|++.         +++...+..... ........+++|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            78999999986  9999999999999999998887652         221111111111 1123478888999887  6 


Q ss_pred             -----------------cchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHH
Q 045749          128 -----------------VSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLT  190 (210)
Q Consensus       128 -----------------~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~  190 (210)
                                       +..+.++++.+.++  ++|+||||||+......++.+.+.++|++++++|+.|+++++++++|
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g--~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p  159 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYG--KINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHC--CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcC--CCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                             66777788888877  69999999998543234578999999999999999999999999999


Q ss_pred             HhHhCCCCEEEEecccccc
Q 045749          191 GMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       191 ~m~~~~~g~iv~isS~ag~  209 (210)
                      +|+++  |+||++||.+|.
T Consensus       160 ~m~~~--g~Iv~isS~~~~  176 (329)
T 3lt0_A          160 IMKPQ--SSIISLTYHASQ  176 (329)
T ss_dssp             GEEEE--EEEEEEECGGGT
T ss_pred             HHhhC--CeEEEEeCcccc
Confidence            99765  999999999875

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.93  E-value=8.6e-25  Score=172.55  Aligned_cols=137  Identities=29%  Similarity=0.421  Sum_probs=111.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++.||+++||||++|||++++++|+++|++|++++|+++++++..+++    +  ...++.+|++++.    .++++.+
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~----~~~~~~~   72 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----P--GIEPVCVDLGDWE----ATERALG   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHH----HHHHHHT
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C--CCCEEEEeCCCHH----HHHHHHH
Confidence            3466999999999999999999999999999999999988777655443    1  2345678887663    3333333


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||.....+  +.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||.++.
T Consensus        73 ~~~--~id~vi~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  140 (244)
T 3d3w_A           73 SVG--PVDLLVNNAAVALLQP--FLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ  140 (244)
T ss_dssp             TCC--CCCEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             HcC--CCCEEEECCccCCCcc--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhc
Confidence            333  6999999999876533  67889999999999999999999999999998877 7999999998764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.93  E-value=9.4e-25  Score=172.24  Aligned_cols=136  Identities=29%  Similarity=0.397  Sum_probs=111.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++||||++|||++++++|+++|++|++++|+++++++..+++    +  ...++.+|++++    +.++++.+.
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~----~~~~~~~~~   73 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----P--GIEPVCVDLGDW----DATEKALGG   73 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCH----HHHHHHHTT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----c--CCCcEEecCCCH----HHHHHHHHH
Confidence            456899999999999999999999999999999999988776654432    1  234567888776    333344333


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||.++.
T Consensus        74 ~~--~id~vi~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~  140 (244)
T 1cyd_A           74 IG--PVDLLVNNAALVIMQP--FLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH  140 (244)
T ss_dssp             CC--CCSEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             cC--CCCEEEECCcccCCCC--cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhc
Confidence            33  6999999999876533  67889999999999999999999999999998877 7999999998764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.93  E-value=1.5e-25  Score=179.76  Aligned_cols=141  Identities=16%  Similarity=0.239  Sum_probs=116.2

Q ss_pred             cCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecChhH-HHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           61 SYGSWALITGA--TDGIGKAFAHQLAQHGLNLILVSRNHNK-LEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        61 ~~gk~vlITGa--ssGiG~~~a~~l~~~G~~Vi~~~r~~~~-l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      +.||+++||||  ++|||+++|++|+++|++|++++|++++ +++..+++     +.++.++++|++++.+.++.++++.
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-----PAKAPLLELDVQNEEHLASLAGRVT   79 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-----SSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-----CCCceEEEccCCCHHHHHHHHHHHH
Confidence            56899999999  9999999999999999999999998765 34433222     3467788999999988888888888


Q ss_pred             HHhcC-CCccEEEEcCCCCCCC---cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          138 MAIDG-LEVGVLINNVGITYPK---AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       138 ~~~~~-~~id~lvnnAg~~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +.++. .++|+||||||.....   ..++.+.+.++|++++++|+.|+++++++++|+|++  +|+||++||.++
T Consensus        80 ~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~  152 (269)
T 2h7i_A           80 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS  152 (269)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS
T ss_pred             HHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc
Confidence            87761 1599999999986521   133678899999999999999999999999999865  389999999764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.93  E-value=1.2e-25  Score=182.23  Aligned_cols=132  Identities=23%  Similarity=0.294  Sum_probs=111.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++.+|+++..+    ++++.+
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~----v~~~~~   82 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSS----VRRFAD   82 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHH----HHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHH----HHHHHH
Confidence            4577999999999999999999999999999999999998887765544     4578889999987743    444444


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|+||||||+..+    ..+.+.++|++++++|+.|+++++++++|.|.+    +||++||.++.
T Consensus        83 ~~~--~iD~lv~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~  143 (291)
T 3rd5_A           83 GVS--GADVLINNAGIMAV----PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHW  143 (291)
T ss_dssp             TCC--CEEEEEECCCCCSC----CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGT
T ss_pred             hcC--CCCEEEECCcCCCC----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhc
Confidence            443  79999999998753    246688999999999999999999999998854    89999998874

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.92  E-value=9.4e-25  Score=187.18  Aligned_cols=141  Identities=26%  Similarity=0.391  Sum_probs=118.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.||+++||||++|||+++|++|+++|++|++++|+... ++..+...+.    ...++.+|+++..+.++.++++.+.+
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~----~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV----GGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH----TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc----CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999997532 2222222222    24578899999988888888887777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++ ++|++|||||+....+  +.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus       286 g~-~id~lV~nAGv~~~~~--~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~  351 (454)
T 3u0b_A          286 GG-KVDILVNNAGITRDKL--LANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGI  351 (454)
T ss_dssp             TT-CCSEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHH
T ss_pred             CC-CceEEEECCcccCCCc--cccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhC
Confidence            63 5999999999987644  789999999999999999999999999999988888999999998764

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.92  E-value=2.7e-25  Score=175.53  Aligned_cols=133  Identities=11%  Similarity=0.047  Sum_probs=111.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .++|+++||||++|||+++|++|+++|++|++++|++++.+            .....+.+|++++.+.++.++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~   72 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLL   72 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            35899999999999999999999999999999999876532            134667789998877777778887777


Q ss_pred             cCCCccEEEEcCCCCCCCcccc-cCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFF-HEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +..++|+||||||.....+  + .+.+.++|++.+++|+.|+++++++++|+|++  +|+||++||.++.
T Consensus        73 ~~g~iD~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~  138 (241)
T 1dhr_A           73 GDQKVDAILCVAGGWAGGN--AKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAAL  138 (241)
T ss_dssp             TTCCEEEEEECCCCCCCBC--TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGG
T ss_pred             CCCCCCEEEEcccccCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHc
Confidence            3126999999999876533  5 67889999999999999999999999999864  4899999999875

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.92  E-value=1e-25  Score=178.28  Aligned_cols=136  Identities=19%  Similarity=0.306  Sum_probs=96.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|||+++|++|++ |++|++++|+++++++..+       ..++..+.+|++++.. .+...+..+.
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~-~~~~~~~~~~   72 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEVL-EEGGVDKLKN   72 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHHH-TSSSCGGGTT
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHHH-HHHHHHHHHh
Confidence            35689999999999999999999988 9999999999887765533       2347788889887643 2222222233


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||.....+  +.+.+.++|++++++|+.|++++++.++|.|++++ |+||++||.++.
T Consensus        73 ~~--~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~  137 (245)
T 3e9n_A           73 LD--HVDTLVHAAAVARDTT--IEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGN  137 (245)
T ss_dssp             CS--CCSEEEECC------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC-----
T ss_pred             cC--CCCEEEECCCcCCCCc--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccc
Confidence            33  7999999999876544  77889999999999999999999999999998765 999999998874

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.92  E-value=6.5e-25  Score=175.57  Aligned_cols=139  Identities=22%  Similarity=0.275  Sum_probs=119.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQ-HGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~-~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++|+++||||++|||+++|++|++ +|++|++++|+.+++++..+++...  +.++.++.+|+++..+.++.++++.+.+
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            489999999999999999999999 9999999999999888888888765  4567889999999877777778887777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCC-HHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVD-EKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~-~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||......   .+.+ .+++++++++|+.|++++++.++|.|++  .|+||++||.++.
T Consensus        81 g--~id~li~~Ag~~~~~~---~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~  143 (276)
T 1wma_A           81 G--GLDVLVNNAGIAFKVA---DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSV  143 (276)
T ss_dssp             S--SEEEEEECCCCCCCTT---CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHH
T ss_pred             C--CCCEEEECCcccccCC---CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhh
Confidence            6  6999999999865432   2334 5899999999999999999999998854  4899999998653

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.92  E-value=3.1e-25  Score=174.62  Aligned_cols=132  Identities=12%  Similarity=0.108  Sum_probs=110.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ++|+++||||++|||+++|++|+++|++|++++|++++.+            .....+.+|++++.+.++.++++.+.++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   69 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSLQ   69 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999999999999876532            1345667888888777777777777773


Q ss_pred             CCCccEEEEcCCCCCCCcccc-cCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFF-HEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ..++|++|||||.....+  + .+.+.++|++.+++|+.|+++++++++|.|++  .|+||++||.++.
T Consensus        70 ~g~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~  134 (236)
T 1ooe_A           70 GSQVDGVFCVAGGWAGGS--ASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAM  134 (236)
T ss_dssp             TCCEEEEEECCCCCCCBC--TTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGG
T ss_pred             CCCCCEEEECCcccCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhc
Confidence            226999999999876533  5 67789999999999999999999999999854  4899999998874

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.92  E-value=1.6e-24  Score=180.78  Aligned_cols=146  Identities=15%  Similarity=0.060  Sum_probs=116.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecChhHHH------------HHHHHHHhhCCCceeEEEEEeccc
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQ-HGLNLILVSRNHNKLE------------KISNEIQAENPNTQINIVEYDFSC  125 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~-~G~~Vi~~~r~~~~l~------------~~~~~l~~~~~~~~~~~~~~D~~~  125 (210)
                      ....||+++||||++|||+++|+.|++ +|++|++++|+.+..+            ...+++++.  +.+...+.+|+++
T Consensus        43 ~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~--G~~a~~i~~Dvtd  120 (405)
T 3zu3_A           43 IANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK--GLYAKSINGDAFS  120 (405)
T ss_dssp             CTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTS
T ss_pred             cCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc--CCceEEEECCCCC
Confidence            345689999999999999999999999 9999999998765432            223344443  5577889999999


Q ss_pred             CccchhhHHHHHHHhcCCCccEEEEcCCCCCC-----------Ccccc---------------------cCCCHHHHHHH
Q 045749          126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYP-----------KAMFF---------------------HEVDEKEWMDI  173 (210)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~-----------~~~~~---------------------~~~~~~~~~~~  173 (210)
                      +.+.++.++++.+.++  ++|+||||||....           ...++                     .+.++|+|+++
T Consensus       121 ~~~v~~~v~~i~~~~G--~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~  198 (405)
T 3zu3_A          121 DEIKQLTIDAIKQDLG--QVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDST  198 (405)
T ss_dssp             HHHHHHHHHHHHHHTS--CEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcC--CCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHH
Confidence            9888888899998887  69999999998510           01123                     67899999999


Q ss_pred             hHhhhhHHH-HHHHHHHHH-hHhCCCCEEEEecccccc
Q 045749          174 VRVNLEGTT-RVTKAVLTG-MMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       174 ~~vN~~g~~-~l~~~~l~~-m~~~~~g~iv~isS~ag~  209 (210)
                      +++|..+.+ .+++++.+. |++ +.|+|||+||+++.
T Consensus       199 v~Vn~~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~  235 (405)
T 3zu3_A          199 VAVMGGEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEK  235 (405)
T ss_dssp             HHHHSSHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCG
T ss_pred             HHhhchhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhh
Confidence            999999998 788887754 544 45999999999874

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.92  E-value=6e-25  Score=184.82  Aligned_cols=149  Identities=15%  Similarity=0.054  Sum_probs=118.4

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecChhHHHH------------HHHHHHhhCCCceeEEEEEec
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQ-HGLNLILVSRNHNKLEK------------ISNEIQAENPNTQINIVEYDF  123 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~-~G~~Vi~~~r~~~~l~~------------~~~~l~~~~~~~~~~~~~~D~  123 (210)
                      .++...||+++||||++|||+++|+.|++ +|++|++++|+.+.+++            +.+++++.  +.+...+.+|+
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~--G~~a~~i~~Dv  132 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA--GLYSKSINGDA  132 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT--TCCEEEEESCT
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc--CCcEEEEEecC
Confidence            34445699999999999999999999999 99999999998654332            23455544  56778899999


Q ss_pred             ccCccchhhHHHHHHHh-cCCCccEEEEcCCCC-------------CCCcc-------------------cccCCCHHHH
Q 045749          124 SCDVVSAGNIKAIEMAI-DGLEVGVLINNVGIT-------------YPKAM-------------------FFHEVDEKEW  170 (210)
Q Consensus       124 ~~~~~~~~~~~~~~~~~-~~~~id~lvnnAg~~-------------~~~~~-------------------~~~~~~~~~~  170 (210)
                      +++.+.++.++.+.+.+ +  ++|+||||||..             ...+.                   .+.+.++++|
T Consensus       133 td~~~v~~~v~~i~~~~~G--~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~  210 (422)
T 3s8m_A          133 FSDAARAQVIELIKTEMGG--QVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEI  210 (422)
T ss_dssp             TSHHHHHHHHHHHHHHSCS--CEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCC--CCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHH
Confidence            99988888889999888 6  799999999973             11121                   0136899999


Q ss_pred             HHHhHhhhhHHH-HHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          171 MDIVRVNLEGTT-RVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       171 ~~~~~vN~~g~~-~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++++++|..+.+ .+++.+.+.+..+++|+|||+||++|.
T Consensus       211 ~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~  250 (422)
T 3s8m_A          211 EDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTE  250 (422)
T ss_dssp             HHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCG
T ss_pred             HHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhh
Confidence            999999999997 888888765444446999999999875

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.91  E-value=1.3e-24  Score=171.88  Aligned_cols=128  Identities=18%  Similarity=0.236  Sum_probs=106.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQ-HGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~-~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++|+++||||++|||+++|++|++ .|++|++.+|+++.            ...++.++++|++++.+.++.+    +..
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~----~~~   66 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQQDITNVL----DII   66 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCHHHHHHHH----HHT
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCHHHHHHHH----HHH
Confidence            589999999999999999999999 89999999998641            1345678889998875544433    333


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ...++|+||||||.....+  +.+.+.++|++++++|+.|+++++++++|+|+++  |+||++||.++.
T Consensus        67 ~~~~id~lv~nAg~~~~~~--~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~  131 (244)
T 4e4y_A           67 KNVSFDGIFLNAGILIKGS--IFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCF  131 (244)
T ss_dssp             TTCCEEEEEECCCCCCCBC--TTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGT
T ss_pred             HhCCCCEEEECCccCCCCC--cccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHc
Confidence            3337999999999976644  7789999999999999999999999999998654  899999999875

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.91  E-value=1.5e-24  Score=172.35  Aligned_cols=134  Identities=14%  Similarity=0.058  Sum_probs=106.6

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      +..+..+|+++||||++|||+++|++|+++|++|++++|++++.+              -..+.+|+++..+.++.++++
T Consensus        16 ~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~   81 (251)
T 3orf_A           16 PRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKI   81 (251)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHH
T ss_pred             ccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHH
Confidence            344567999999999999999999999999999999999976432              124567777776666666666


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+.++  ++|++|||||.....+ .+.+.+.++|++++++|+.|+++++++++|.|++  +|+||++||.++.
T Consensus        82 ~~~~g--~iD~li~~Ag~~~~~~-~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~  149 (251)
T 3orf_A           82 NSKSI--KVDTFVCAAGGWSGGN-ASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAAL  149 (251)
T ss_dssp             HTTTC--CEEEEEECCCCCCCBC-TTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGG
T ss_pred             HHHcC--CCCEEEECCccCCCCC-cccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhc
Confidence            66555  7999999999876532 2557789999999999999999999999999855  4899999999875

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.91  E-value=1.2e-24  Score=169.84  Aligned_cols=119  Identities=20%  Similarity=0.156  Sum_probs=99.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++                      +|++++    +.++++.+.
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~----~~v~~~~~~   56 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDE----KSVYHYFET   56 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCH----HHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCH----HHHHHHHHH
Confidence            356899999999999999999999999999999999754                      567666    444555555


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.... ..++.+.+.++|++++++|+.|+++++++++|+|++  +|+||++||.++.
T Consensus        57 ~g--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~  121 (223)
T 3uce_A           57 IG--AFDHLIVTAGSYAP-AGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSR  121 (223)
T ss_dssp             HC--SEEEEEECCCCCCC-CSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGT
T ss_pred             hC--CCCEEEECCCCCCC-CCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhc
Confidence            65  79999999998733 234778999999999999999999999999999855  4899999998874

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.91  E-value=3.6e-24  Score=186.51  Aligned_cols=142  Identities=15%  Similarity=0.190  Sum_probs=115.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEE-ecC-------------hhHHHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLN-LILV-SRN-------------HNKLEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~-~r~-------------~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      .+++++||||++|||+++|++|+++|++ |+++ +|+             .+++++..+++++.  +.++.++.+|+++.
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL--GATATVVTCDLTDA  327 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH--TCEEEEEECCTTSH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc--CCEEEEEECCCCCH
Confidence            5899999999999999999999999998 7777 898             45567777788776  67889999999988


Q ss_pred             ccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecc
Q 045749          127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGS  205 (210)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS  205 (210)
                      .+..+.++++. .++  ++|++|||||+....+  +.+.+.++|+++|++|+.|++++.+.+.|.|++++ .++||++||
T Consensus       328 ~~v~~~~~~i~-~~g--~id~vVh~AGv~~~~~--~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS  402 (525)
T 3qp9_A          328 EAAARLLAGVS-DAH--PLSAVLHLPPTVDSEP--LAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSS  402 (525)
T ss_dssp             HHHHHHHHTSC-TTS--CEEEEEECCCCCCCCC--TTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEE
T ss_pred             HHHHHHHHHHH-hcC--CCcEEEECCcCCCCCc--hhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECC
Confidence            55555544444 333  7999999999987644  78999999999999999999999999999998776 799999999


Q ss_pred             ccccC
Q 045749          206 GAAIV  210 (210)
Q Consensus       206 ~ag~~  210 (210)
                      ++|++
T Consensus       403 ~a~~~  407 (525)
T 3qp9_A          403 VAAIW  407 (525)
T ss_dssp             GGGTT
T ss_pred             HHHcC
Confidence            98863

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.91  E-value=3.6e-24  Score=174.03  Aligned_cols=147  Identities=14%  Similarity=0.137  Sum_probs=106.4

Q ss_pred             cccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecChhHHH--H-----HHHHHHhhCCC---ceeEEEEEe----
Q 045749           59 LKSYGSWALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLE--K-----ISNEIQAENPN---TQINIVEYD----  122 (210)
Q Consensus        59 ~~~~gk~vlITGas--sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~--~-----~~~~l~~~~~~---~~~~~~~~D----  122 (210)
                      +++.||+++||||+  +|||+++|++|+++|++|++++|++..-.  +     ..+++.+...+   .......+|    
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence            45679999999999  99999999999999999999998642110  0     00011110001   112334443    


Q ss_pred             ----ccc------------CccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHH
Q 045749          123 ----FSC------------DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTK  186 (210)
Q Consensus       123 ----~~~------------~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  186 (210)
                          +++            +.+.++.++++.+.++  ++|+||||||+......++.+.+.++|++++++|+.|++++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g--~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  161 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFG--SIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHS--CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcC--CCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence                222            3455666677777776  6999999999754222346789999999999999999999999


Q ss_pred             HHHHHhHhCCCCEEEEecccccc
Q 045749          187 AVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       187 ~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +++|+|++  +|+||++||.++.
T Consensus       162 ~~~~~m~~--~g~iv~isS~~~~  182 (297)
T 1d7o_A          162 HFLPIMNP--GGASISLTYIASE  182 (297)
T ss_dssp             HHGGGEEE--EEEEEEEECGGGT
T ss_pred             HHHHHhcc--CceEEEEeccccc
Confidence            99999965  3899999998764

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.90  E-value=8.3e-24  Score=173.38  Aligned_cols=147  Identities=15%  Similarity=0.133  Sum_probs=107.0

Q ss_pred             cccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecChh------HHHH-HHHHHHhhCCCc---eeEEEEEe----
Q 045749           59 LKSYGSWALITGA--TDGIGKAFAHQLAQHGLNLILVSRNHN------KLEK-ISNEIQAENPNT---QINIVEYD----  122 (210)
Q Consensus        59 ~~~~gk~vlITGa--ssGiG~~~a~~l~~~G~~Vi~~~r~~~------~l~~-~~~~l~~~~~~~---~~~~~~~D----  122 (210)
                      +++.||+++||||  ++|||+++|++|+++|++|++++|++.      ..++ ..+++.+...+.   ....+.+|    
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCS
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccc
Confidence            3467999999999  899999999999999999999998642      1110 011122111111   12334443    


Q ss_pred             --------ccc--------CccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHH
Q 045749          123 --------FSC--------DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTK  186 (210)
Q Consensus       123 --------~~~--------~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  186 (210)
                              +++        +.+.++.++++.+.++  ++|+||||||+......++.+.+.++|++++++|+.|++++++
T Consensus        85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g--~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  162 (315)
T 2o2s_A           85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLG--NIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQ  162 (315)
T ss_dssp             STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHC--SEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhcccccccCCHHHHHHHHHHHHHhcC--CCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence                    332        3455666677777776  6999999999764212346789999999999999999999999


Q ss_pred             HHHHHhHhCCCCEEEEecccccc
Q 045749          187 AVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       187 ~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +++|+|++  +|+||++||.++.
T Consensus       163 ~~~~~m~~--~g~Iv~isS~~~~  183 (315)
T 2o2s_A          163 HFGPIMNE--GGSAVTLSYLAAE  183 (315)
T ss_dssp             HHSTTEEE--EEEEEEEEEGGGT
T ss_pred             HHHHHHhc--CCEEEEEeccccc
Confidence            99999965  3899999998764

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.90  E-value=4.7e-24  Score=175.09  Aligned_cols=147  Identities=15%  Similarity=0.210  Sum_probs=102.8

Q ss_pred             cccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCh-----------hHHH-----------HHHHHHHhhCCC-
Q 045749           59 LKSYGSWALITGA--TDGIGKAFAHQLAQHGLNLILVSRNH-----------NKLE-----------KISNEIQAENPN-  113 (210)
Q Consensus        59 ~~~~gk~vlITGa--ssGiG~~~a~~l~~~G~~Vi~~~r~~-----------~~l~-----------~~~~~l~~~~~~-  113 (210)
                      +++.||+++||||  ++|||+++|++|+++|++|++++|++           ++++           ++.+++++.... 
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            3467999999999  89999999999999999999998753           2222           222333222100 


Q ss_pred             ceeEEEEEe------------ccc--------CccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHH
Q 045749          114 TQINIVEYD------------FSC--------DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDI  173 (210)
Q Consensus       114 ~~~~~~~~D------------~~~--------~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~  173 (210)
                      .....+.+|            +++        +.+.++.++++.+.++  ++|+||||||+......++.+.+.++|+++
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g--~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~  162 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVG--QIDILVHSLANGPEVTKPLLQTSRKGYLAA  162 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHS--CEEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcC--CCCEEEECCccCCCCCCccccCCHHHHHHH
Confidence            012334443            332        3355666677777776  699999999976321234778999999999


Q ss_pred             hHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          174 VRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       174 ~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +++|+.|+++++++++|+|++  +|+||++||.++.
T Consensus       163 ~~vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~  196 (319)
T 2ptg_A          163 VSSSSYSFVSLLQHFLPLMKE--GGSALALSYIASE  196 (319)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEE--EEEEEEEEECC--
T ss_pred             HhHhhHHHHHHHHHHHHHHhc--CceEEEEeccccc
Confidence            999999999999999999965  3899999998764

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.89  E-value=3.4e-23  Score=197.76  Aligned_cols=151  Identities=18%  Similarity=0.197  Sum_probs=123.8

Q ss_pred             CcccCCcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEE-ecChhHHHHHHHHHHhhCC--CceeEEEEEecccCccchhhH
Q 045749           58 NLKSYGSWALITGATDG-IGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGNI  133 (210)
Q Consensus        58 ~~~~~gk~vlITGassG-iG~~~a~~l~~~G~~Vi~~-~r~~~~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~  133 (210)
                      .+++.||+++||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.+..+  +.++.++.+|+++..+.++.+
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence            34567999999999998 9999999999999999998 6888888877777754322  457889999999987777666


Q ss_pred             HHHHHH---hcCC-CccEEEEcCCCCCCCcccccCCC--HHHHHHHhHhhhhHHHHHHHHH--HHHhHhCCCCEEEEecc
Q 045749          134 KAIEMA---IDGL-EVGVLINNVGITYPKAMFFHEVD--EKEWMDIVRVNLEGTTRVTKAV--LTGMMRRKKGAIVNIGS  205 (210)
Q Consensus       134 ~~~~~~---~~~~-~id~lvnnAg~~~~~~~~~~~~~--~~~~~~~~~vN~~g~~~l~~~~--l~~m~~~~~g~iv~isS  205 (210)
                      +.+.+.   ++.. ++|+||||||+.... .++.+.+  .++|+++|++|+.|++.+++.+  +|.|++++.|+||++||
T Consensus       750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~~-~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS  828 (1887)
T 2uv8_A          750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQG-IELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSP  828 (1887)
T ss_dssp             HHHHSCTTTTSCCCCCSEEEECCCCCCCS-BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECS
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCC-CChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcC
Confidence            666554   2112 599999999987654 0367888  8999999999999999999998  78888777799999999


Q ss_pred             cccc
Q 045749          206 GAAI  209 (210)
Q Consensus       206 ~ag~  209 (210)
                      .+|.
T Consensus       829 ~ag~  832 (1887)
T 2uv8_A          829 NHGT  832 (1887)
T ss_dssp             CTTC
T ss_pred             hHhc
Confidence            9875

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.89  E-value=1.4e-23  Score=195.54  Aligned_cols=151  Identities=18%  Similarity=0.220  Sum_probs=124.2

Q ss_pred             CCcccCCcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEE-ecChhHHHHHHHHHHhhCC--CceeEEEEEecccCccchhh
Q 045749           57 KNLKSYGSWALITGATDG-IGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGN  132 (210)
Q Consensus        57 ~~~~~~gk~vlITGassG-iG~~~a~~l~~~G~~Vi~~-~r~~~~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~  132 (210)
                      ..+++.||+++||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.+..+  +.++.++++|+++..+.++.
T Consensus       470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL  549 (1688)
T 2pff_A          470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  549 (1688)
T ss_dssp             SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence            345677999999999998 9999999999999999998 6777777777677644322  45788999999999777777


Q ss_pred             HHHHHHH-----hcCCCccEEEEcCCCCCCCcccccCCC--HHHHHHHhHhhhhHHHHHHHHH--HHHhHhCCCCEEEEe
Q 045749          133 IKAIEMA-----IDGLEVGVLINNVGITYPKAMFFHEVD--EKEWMDIVRVNLEGTTRVTKAV--LTGMMRRKKGAIVNI  203 (210)
Q Consensus       133 ~~~~~~~-----~~~~~id~lvnnAg~~~~~~~~~~~~~--~~~~~~~~~vN~~g~~~l~~~~--l~~m~~~~~g~iv~i  203 (210)
                      ++.+.+.     ++. ++|+||||||+.... .++.+.+  .++|+++|++|+.|++.+++.+  +|.|++++.|+||++
T Consensus       550 Ve~I~e~~~~~GfG~-~IDILVNNAGI~~~g-~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnI  627 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGW-DLDAIIPFAAIPEQG-IELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPM  627 (1688)
T ss_dssp             HHHHHSCTTSSSCCC-CCCEEECCCCCCCCS-BCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCC
T ss_pred             HHHHHHhccccccCC-CCeEEEECCCcCCCC-CChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEE
Confidence            6666654     321 599999999987554 1367777  9999999999999999999999  888988877999999


Q ss_pred             cccccc
Q 045749          204 GSGAAI  209 (210)
Q Consensus       204 sS~ag~  209 (210)
                      ||.+|.
T Consensus       628 SSiAG~  633 (1688)
T 2pff_A          628 SPNHGT  633 (1688)
T ss_dssp             CSCTTT
T ss_pred             EChHhc
Confidence            999875

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.89  E-value=9.3e-23  Score=160.36  Aligned_cols=128  Identities=22%  Similarity=0.275  Sum_probs=106.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +|+++||||++|||++++++|+++|++|++++|+++ .             .++.++.+|++++.+.++.++++ +.++ 
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~-   65 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARA-QEEA-   65 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHH-HHHS-
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHH-HhhC-
Confidence            689999999999999999999999999999999864 1             13477889999987777777777 6665 


Q ss_pred             CCccEEEEcCCCCCCCcccccCC----CHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC---C---CEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEV----DEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK---K---GAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~----~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~---~---g~iv~isS~ag~  209 (210)
                       ++|++|||||.....+  +.+.    +.++|++.+++|+.++++++++++|.|.+++   .   |+||++||.++.
T Consensus        66 -~~d~li~~ag~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  139 (242)
T 1uay_A           66 -PLFAVVSAAGVGLAEK--ILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF  139 (242)
T ss_dssp             -CEEEEEECCCCCCCCC--SBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH
T ss_pred             -CceEEEEcccccCccc--ccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc
Confidence             6999999999876533  3343    4559999999999999999999999998765   3   499999998753

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.88  E-value=1.1e-22  Score=193.94  Aligned_cols=149  Identities=19%  Similarity=0.205  Sum_probs=120.7

Q ss_pred             cccCCcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEEe-cChhHHHHHHHHHHhhC--CCceeEEEEEecccCccchhhHH
Q 045749           59 LKSYGSWALITGATDG-IGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAEN--PNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        59 ~~~~gk~vlITGassG-iG~~~a~~l~~~G~~Vi~~~-r~~~~l~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      +++.||+++||||++| ||+++|++|+++|++|++++ |+.+++++..+++.+..  .+.++.++.+|+++..+..+.++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            3567999999999999 99999999999999999985 77777777666664332  14578899999998866666666


Q ss_pred             HHHHH---hcCCCccEEEEcCCCCCCCcccccCCC--HHHHHHHhHhhhhHHHHHHHH--HHHHhHhCCCCEEEEecccc
Q 045749          135 AIEMA---IDGLEVGVLINNVGITYPKAMFFHEVD--EKEWMDIVRVNLEGTTRVTKA--VLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       135 ~~~~~---~~~~~id~lvnnAg~~~~~~~~~~~~~--~~~~~~~~~vN~~g~~~l~~~--~l~~m~~~~~g~iv~isS~a  207 (210)
                      .+.+.   ++. ++|+||||||+.... .++.+.+  .++|+++|++|+.|++++++.  ++|.|++++.|+||++||.+
T Consensus       728 ~i~~~~~~~G~-~IDiLVnNAGi~~~~-~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~a  805 (1878)
T 2uv9_A          728 YIYDTKNGLGW-DLDYVVPFAAIPENG-REIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNH  805 (1878)
T ss_dssp             HHHCSSSSCCC-CCSEEEECCCCCCTT-CCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCS
T ss_pred             HHHHhhcccCC-CCcEEEeCcccccCC-CChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchh
Confidence            55544   321 599999999987653 1377888  899999999999999999987  78888877779999999998


Q ss_pred             cc
Q 045749          208 AI  209 (210)
Q Consensus       208 g~  209 (210)
                      |.
T Consensus       806 g~  807 (1878)
T 2uv9_A          806 GT  807 (1878)
T ss_dssp             SS
T ss_pred             hc
Confidence            75

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.88  E-value=1.9e-22  Score=170.52  Aligned_cols=145  Identities=13%  Similarity=0.025  Sum_probs=115.3

Q ss_pred             cCCcEEEEEcCCChHHHH--HHHHHHHcCCeEEEEecChhH------------HHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           61 SYGSWALITGATDGIGKA--FAHQLAQHGLNLILVSRNHNK------------LEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~--~a~~l~~~G~~Vi~~~r~~~~------------l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      ..||+++||||++|||++  +|+.|+++|++|++++|+.+.            .+.+.+.+++.  +.++..+.+|++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dvtd~  135 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK--GLVAKNFIEDAFSN  135 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc--CCcEEEEEeeCCCH
Confidence            569999999999999999  999999999999999997543            23333344443  56788899999999


Q ss_pred             ccchhhHHHHHHHhcCCCccEEEEcCCCC-------------CCCcc-------------------cccCCCHHHHHHHh
Q 045749          127 VVSAGNIKAIEMAIDGLEVGVLINNVGIT-------------YPKAM-------------------FFHEVDEKEWMDIV  174 (210)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lvnnAg~~-------------~~~~~-------------------~~~~~~~~~~~~~~  174 (210)
                      ++.++.++++.+.++  ++|+||||||..             ...+.                   .+.+.++++|++++
T Consensus       136 ~~v~~~v~~i~~~~G--~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~  213 (418)
T 4eue_A          136 ETKDKVIKYIKDEFG--KIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETR  213 (418)
T ss_dssp             HHHHHHHHHHHHTTC--CEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcC--CCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHH
Confidence            888888888888876  799999999975             11111                   12467999999999


Q ss_pred             HhhhhHHH-HHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          175 RVNLEGTT-RVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       175 ~vN~~g~~-~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|..+.+ .+++.+.+.+..++.|+||++||+++.
T Consensus       214 ~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~  249 (418)
T 4eue_A          214 KVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSP  249 (418)
T ss_dssp             HHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCG
T ss_pred             HHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhc
Confidence            99999998 778888776544556999999999864

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.87  E-value=5.2e-22  Score=171.48  Aligned_cols=136  Identities=21%  Similarity=0.293  Sum_probs=111.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCh---hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNH---NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~---~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++++||||++|||+++|++|+++|+ +|++++|+.   +..++..+++++.  +.++.++.+|+++..+..+.++++.+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            49999999999999999999999999 799999974   3467777777765  67889999999988555544444332


Q ss_pred             HhcCCCccEEEEcCCCC-CCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGIT-YPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .   .++|++|||||+. ...  .+.+.+.++|+++|++|+.|++++.+.+.+    .+.++||++||++++
T Consensus       317 ~---g~ld~vVh~AGv~~~~~--~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~----~~~~~iV~~SS~a~~  379 (496)
T 3mje_A          317 D---APLTAVFHSAGVAHDDA--PVADLTLGQLDALMRAKLTAARHLHELTAD----LDLDAFVLFSSGAAV  379 (496)
T ss_dssp             T---SCEEEEEECCCCCCSCC--CTTTCCHHHHHHHHHTTHHHHHHHHHHHTT----SCCSEEEEEEEHHHH
T ss_pred             h---CCCeEEEECCcccCCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEEEeChHhc
Confidence            2   2799999999987 443  378999999999999999999999988654    456899999998875

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.87  E-value=4.8e-22  Score=157.91  Aligned_cols=117  Identities=21%  Similarity=0.232  Sum_probs=93.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||++|||+++|++|+++|++|++++|+++++++            .   +.+|+++.    +.++++.+.+. .
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~---~~~Dl~~~----~~v~~~~~~~~-~   61 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------D---LSTAEGRK----QAIADVLAKCS-K   61 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------C---TTSHHHHH----HHHHHHHTTCT-T
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------------c---cccCCCCH----HHHHHHHHHhC-C
Confidence            689999999999999999999999999999998754321            0   33566554    33444444441 2


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|+||||||.....         +.|++++++|+.|+++++++++|.|++++.|+||++||.++.
T Consensus        62 ~id~lv~~Ag~~~~~---------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  118 (257)
T 1fjh_A           62 GMDGLVLCAGLGPQT---------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA  118 (257)
T ss_dssp             CCSEEEECCCCCTTC---------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred             CCCEEEECCCCCCCc---------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence            799999999975421         128899999999999999999999998888999999999875

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.86  E-value=2.9e-22  Score=182.02  Aligned_cols=135  Identities=17%  Similarity=0.288  Sum_probs=114.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHH-HcCCe-EEEEecC---hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLA-QHGLN-LILVSRN---HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~-~~G~~-Vi~~~r~---~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      .+|+++||||++|||+++|++|+ ++|++ |++++|+   .+++++..+++++.  +.++.++.+|+++..+.++.++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHH
Confidence            58999999999999999999999 79995 9999999   45577777888765  678999999999885555544444


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+.   .++|++|||||+....+  +.+++.|+|+++|++|+.|++++++++.|.|      +||++||++|.
T Consensus       607 ~~~---~~id~lVnnAGv~~~~~--~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~  668 (795)
T 3slk_A          607 PDE---HPLTAVVHAAGVLDDGV--SESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGV  668 (795)
T ss_dssp             CTT---SCEEEEEECCCCCCCCC--GGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHH
T ss_pred             HHh---CCCEEEEECCCcCCCCc--hhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhc
Confidence            332   27999999999987644  8899999999999999999999999998776      89999999874

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.85  E-value=1.1e-21  Score=150.71  Aligned_cols=124  Identities=24%  Similarity=0.321  Sum_probs=97.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||++|||++++++|+++  +|++++|+++++++..+++.    .   .++.+|++++.+.+    ++.+.++  
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~----~---~~~~~D~~~~~~~~----~~~~~~~--   65 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG----A---RALPADLADELEAK----ALLEEAG--   65 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT----C---EECCCCTTSHHHHH----HHHHHHC--
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc----C---cEEEeeCCCHHHHH----HHHHhcC--
Confidence            57999999999999999999998  99999999988877666552    1   66778888764333    3333344  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++|++|||||.....+  +.+.+.++|++.+++|+.|++++++++    ++++.++||++||.++
T Consensus        66 ~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~  124 (207)
T 2yut_A           66 PLDLLVHAVGKAGRAS--VREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPR  124 (207)
T ss_dssp             SEEEEEECCCCCCCBC--SCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHH
T ss_pred             CCCEEEECCCcCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhh
Confidence            6999999999875543  678899999999999999999999997    3455689999999875

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.85  E-value=3.7e-21  Score=147.52  Aligned_cols=117  Identities=16%  Similarity=0.198  Sum_probs=96.8

Q ss_pred             Cc-EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GS-WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk-~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +| +++||||++|||++++++|+ +|++|++++|+++                   .+.+|++++.    .++++.+.++
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~----~~~~~~~~~~   57 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNID----SIKKMYEQVG   57 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHH----HHHHHHHHHC
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHH----HHHHHHHHhC
Confidence            44 79999999999999999999 9999999999864                   2567887663    3444444444


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                        ++|++|||||.....+  +.+.+.++|++.+++|+.+++++++++.|.|.+  +|+||++||.++.
T Consensus        58 --~~d~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~  119 (202)
T 3d7l_A           58 --KVDAIVSATGSATFSP--LTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMME  119 (202)
T ss_dssp             --CEEEEEECCCCCCCCC--GGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGT
T ss_pred             --CCCEEEECCCCCCCCC--hhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhc
Confidence              6999999999875433  678899999999999999999999999998854  3899999998764

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.84  E-value=1.1e-20  Score=163.34  Aligned_cols=137  Identities=18%  Similarity=0.190  Sum_probs=111.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChh---HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHN---KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~---~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+++++||||++|||++++++|+++|++ |++++|+..   .+++..++++..  +.++.++.+|+++..+..+.++.+ 
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~i-  301 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGI-  301 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHHHH-
Confidence            4799999999999999999999999995 999999875   466677777664  567889999998875444444433 


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +..  .++|++|||||+.....  +.+.+.+++++++++|+.|++++.+.+.    +.+.++||++||+++.
T Consensus       302 ~~~--g~ld~VIh~AG~~~~~~--l~~~~~~~~~~~~~~nv~g~~~L~~~~~----~~~~~~~V~~SS~a~~  365 (486)
T 2fr1_A          302 GDD--VPLSAVFHAAATLDDGT--VDTLTGERIERASRAKVLGARNLHELTR----ELDLTAFVLFSSFASA  365 (486)
T ss_dssp             CTT--SCEEEEEECCCCCCCCC--GGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSCCSEEEEEEEHHHH
T ss_pred             Hhc--CCCcEEEECCccCCCCc--cccCCHHHHHHHHHHHHHHHHHHHHHhC----cCCCCEEEEEcChHhc
Confidence            122  27999999999876644  7789999999999999999999998864    3467899999998764

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.82  E-value=1.4e-19  Score=157.15  Aligned_cols=134  Identities=18%  Similarity=0.257  Sum_probs=108.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChh---HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHN---KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~---~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+++++||||++|||++++++|+++|+ +|++++|+..   .+++..++++..  +.++.++.+|+++..+    ++++.
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~----v~~~~  331 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDA----LAALV  331 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHH----HHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHH----HHHHH
Confidence            479999999999999999999999999 5999999874   466677777654  5678899999987743    33333


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +. +  ++|++|||||+.....  +.+.+.+++++++++|+.|++++.+.+.+ +  .+.++||++||.++.
T Consensus       332 ~~-~--~ld~VVh~AGv~~~~~--~~~~~~~~~~~~~~~nv~g~~~L~~~~~~-~--~~~~~~V~~SS~a~~  395 (511)
T 2z5l_A          332 TA-Y--PPNAVFHTAGILDDAV--IDTLSPESFETVRGAKVCGAELLHQLTAD-I--KGLDAFVLFSSVTGT  395 (511)
T ss_dssp             HH-S--CCSEEEECCCCCCCBC--GGGCCHHHHHHHHHHHHHHHHHHHHHTSS-C--TTCCCEEEEEEGGGT
T ss_pred             hc-C--CCcEEEECCcccCCcc--cccCCHHHHHHHHHHHHHHHHHHHHHHhh-c--cCCCEEEEEeCHHhc
Confidence            33 2  7999999999876644  77899999999999999999999987543 1  156899999999875

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.82  E-value=2.2e-20  Score=185.30  Aligned_cols=139  Identities=17%  Similarity=0.161  Sum_probs=103.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHH---HHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKL---EKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l---~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+|+++||||++|||+++|+.|+++|++ |++++|+..+.   ++..++++..  +.++.++.+|+++..+.++.++++.
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT--TCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC--CCEEEEEecCCCCHHHHHHHHHHHH
Confidence            5899999999999999999999999997 88899986543   3444555443  5678889999999887777777765


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      + ++  ++|++|||||+....+  +.+++.|+|++++++|+.|++++.+.+.|.|.+.  |+||++||++|.
T Consensus      1961 ~-~g--~id~lVnnAgv~~~~~--~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~ 2025 (2512)
T 2vz8_A         1961 Q-LG--PVGGVFNLAMVLRDAV--LENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCG 2025 (2512)
T ss_dssp             H-HS--CEEEEEECCCC------------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHH
T ss_pred             h-cC--CCcEEEECCCcCCCCc--hhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhc
Confidence            3 54  7999999999876543  7899999999999999999999999999987543  899999999875

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.80  E-value=6.1e-20  Score=146.85  Aligned_cols=114  Identities=21%  Similarity=0.215  Sum_probs=91.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ++|+++||||++|||++++++|+++|++|++++|++.+.+           ..++.++.+|++++.       .+.+.+.
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~-------~~~~~~~   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADAN-------AVNAMVA   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHH-------HHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHH-------HHHHHHc
Confidence            3689999999999999999999999999999999875432           346788899998662       3333333


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                        ++|+||||||..          +.++|++++++|+.|++++++++.    +++.++||++||.+++
T Consensus        64 --~~D~vi~~Ag~~----------~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~~~~  115 (267)
T 3rft_A           64 --GCDGIVHLGGIS----------VEKPFEQILQGNIIGLYNLYEAAR----AHGQPRIVFASSNHTI  115 (267)
T ss_dssp             --TCSEEEECCSCC----------SCCCHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEEEEGGGG
T ss_pred             --CCCEEEECCCCc----------CcCCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcchHHh
Confidence              589999999973          223477899999999999999973    4567899999998764

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.80  E-value=2.5e-19  Score=141.53  Aligned_cols=117  Identities=24%  Similarity=0.246  Sum_probs=92.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||++|||++++++|+++|++|++++|++++++.               .+.+|+++.    +.++++.+.+. .
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~----~~~~~~~~~~~-~   61 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRE----TAVAAVLDRCG-G   61 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHH----HHHHHHHHHHT-T
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccH----HHHHHHHHHcC-C
Confidence            579999999999999999999999999999998654321               023455554    33444444442 2


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|++|||||....         .+++++.+++|+.|+++++++++|.|++++.++||++||.+++
T Consensus        62 ~~d~vi~~Ag~~~~---------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  118 (255)
T 2dkn_A           62 VLDGLVCCAGVGVT---------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAAT  118 (255)
T ss_dssp             CCSEEEECCCCCTT---------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred             CccEEEECCCCCCc---------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccc
Confidence            69999999997542         1237889999999999999999999988888999999998764

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.79  E-value=5.7e-19  Score=138.47  Aligned_cols=118  Identities=15%  Similarity=0.222  Sum_probs=90.9

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCcee-EEEEEecccCccchhhHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQI-NIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ..+++|++++||||+++||++++++|+++|++|++++|+++++++..+        ..+ .++.+|++ + .       +
T Consensus        16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~-~-~-------~   78 (236)
T 3e8x_A           16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLE-E-D-------F   78 (236)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTT-S-C-------C
T ss_pred             ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccH-H-H-------H
Confidence            345779999999999999999999999999999999999988765432        145 77888988 2 2       2


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .+.++  ++|++|||||....          +++++.+++|+.++.++++++.    +++.++||++||..+
T Consensus        79 ~~~~~--~~D~vi~~ag~~~~----------~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~  134 (236)
T 3e8x_A           79 SHAFA--SIDAVVFAAGSGPH----------TGADKTILIDLWGAIKTIQEAE----KRGIKRFIMVSSVGT  134 (236)
T ss_dssp             GGGGT--TCSEEEECCCCCTT----------SCHHHHHHTTTHHHHHHHHHHH----HHTCCEEEEECCTTC
T ss_pred             HHHHc--CCCEEEECCCCCCC----------CCccccchhhHHHHHHHHHHHH----HcCCCEEEEEecCCC
Confidence            22344  58999999996431          3477899999999999999873    446789999999765

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.78  E-value=3.1e-19  Score=177.49  Aligned_cols=143  Identities=13%  Similarity=0.124  Sum_probs=107.6

Q ss_pred             cCCcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEEecChhH-----HHHHHHHHHhhCCCceeEEEEEecccCccchhhHH
Q 045749           61 SYGSWALITGATDG-IGKAFAHQLAQHGLNLILVSRNHNK-----LEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        61 ~~gk~vlITGassG-iG~~~a~~l~~~G~~Vi~~~r~~~~-----l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      +.||+++||||++| ||+++|+.|+++|++|++++|+.++     ++++.+++...  +.++..+++|+++..+.++.++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~--G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF--DATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHH
Confidence            67999999999999 9999999999999999999998766     55555555332  5678889999999877777777


Q ss_pred             HHHH----HhcCCCccEEEEcCCCCC---CCcccccCCCHHHHHH----HhHhhhhHHHHHHHHHHHHhHhCCCC----E
Q 045749          135 AIEM----AIDGLEVGVLINNVGITY---PKAMFFHEVDEKEWMD----IVRVNLEGTTRVTKAVLTGMMRRKKG----A  199 (210)
Q Consensus       135 ~~~~----~~~~~~id~lvnnAg~~~---~~~~~~~~~~~~~~~~----~~~vN~~g~~~l~~~~l~~m~~~~~g----~  199 (210)
                      ++.+    .++  ++|+||||||+..   +......+.+.++|++    .+++|+.+++.+++.+.|.|.+++.+    .
T Consensus      2212 ~i~~~~~~~fG--~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~i 2289 (3089)
T 3zen_D         2212 WVGTEQTESLG--PQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHV 2289 (3089)
T ss_dssp             HHTSCCEEEES--SSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred             HHHhhhhhhcC--CCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEE
Confidence            7766    455  7999999999721   1111122334444544    49999999999999999999887642    3


Q ss_pred             EEEecccc
Q 045749          200 IVNIGSGA  207 (210)
Q Consensus       200 iv~isS~a  207 (210)
                      |++.||..
T Consensus      2290 i~~~ss~~ 2297 (3089)
T 3zen_D         2290 VLPGSPNR 2297 (3089)
T ss_dssp             EEEECSST
T ss_pred             EEECCccc
Confidence            44555544

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.75  E-value=3.6e-18  Score=140.47  Aligned_cols=129  Identities=19%  Similarity=0.173  Sum_probs=96.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+++++||||+++||++++++|+++|++|++++|+.++.++..+++.... +..+.++.+|+++..    .++++.+.  
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~----~~~~~~~~--   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDER----ALARIFDA--   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHH----HHHHHHHH--
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHH----HHHHHHhc--
Confidence            36799999999999999999999999999999998776665555554432 346777888888763    33333332  


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       .++|++|||||......      ..++.++.+++|+.++.+++++    +++.+.++||++||.+.
T Consensus        77 -~~~d~vih~A~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~iv~~SS~~~  132 (341)
T 3enk_A           77 -HPITAAIHFAALKAVGE------SVAKPIEYYRNNLDSLLSLLRV----MRERAVKRIVFSSSATV  132 (341)
T ss_dssp             -SCCCEEEECCCCCCHHH------HHHCHHHHHHHHHHHHHHHHHH----HHHTTCCEEEEEEEGGG
T ss_pred             -cCCcEEEECccccccCc------cccChHHHHHHHHHHHHHHHHH----HHhCCCCEEEEEecceE
Confidence             25999999999754321      2344557899999999887766    45566789999999764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.73  E-value=5.2e-18  Score=133.20  Aligned_cols=119  Identities=17%  Similarity=0.146  Sum_probs=92.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +.+|+++||||++|||++++++|+++|+  +|++++|+++++++..        ...+.++.+|++++.+..+.      
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~------   81 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASA------   81 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGG------
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHH------
Confidence            3478999999999999999999999999  9999999876543211        12467788999887544432      


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       +.  ++|++|||||....         .+++++.+++|+.++..+++++    ++++.++||++||.+++
T Consensus        82 -~~--~~d~vi~~ag~~~~---------~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~~~  136 (242)
T 2bka_A           82 -FQ--GHDVGFCCLGTTRG---------KAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGAD  136 (242)
T ss_dssp             -GS--SCSEEEECCCCCHH---------HHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCC
T ss_pred             -hc--CCCEEEECCCcccc---------cCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCcCC
Confidence             22  58999999996421         2356789999999998888764    45567899999998764

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.73  E-value=4.5e-17  Score=133.68  Aligned_cols=127  Identities=17%  Similarity=0.185  Sum_probs=98.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEE-EEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIV-EYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .++++++||||+|+||++++++|+++|++|++++|+.++.+++.+.+.... +.++.++ .+|+++..+..+.+      
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~------   81 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVI------   81 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTT------
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHH------
Confidence            458999999999999999999999999999999999887776666554432 2456677 78998875444422      


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       .  ++|++|||||.....         +++++.+++|+.|+.++++++.+   +.+.+++|++||.+++
T Consensus        82 -~--~~d~vih~A~~~~~~---------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~  136 (342)
T 1y1p_A           82 -K--GAAGVAHIASVVSFS---------NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSA  136 (342)
T ss_dssp             -T--TCSEEEECCCCCSCC---------SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGT
T ss_pred             -c--CCCEEEEeCCCCCCC---------CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHh
Confidence             2  589999999975321         23567999999999999999764   2345899999998653

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.73  E-value=7.6e-18  Score=138.47  Aligned_cols=129  Identities=17%  Similarity=0.191  Sum_probs=94.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ++++++||||+|+||++++++|+++|++|++++|+.++.+.  +.+.......++.++.+|+++..    .++++.+.. 
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~----~~~~~~~~~-   74 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFS----NIIRTIEKV-   74 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHH----HHHHHHHHH-
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHH----HHHHHHHhc-
Confidence            47899999999999999999999999999999998765322  12222222345777788887653    333333333 


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                        ++|++|||||....      +.+.+++++.+++|+.|+.++++++.+ +  ...+++|++||.+.
T Consensus        75 --~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~-~--~~~~~iv~~SS~~v  130 (345)
T 2z1m_A           75 --QPDEVYNLAAQSFV------GVSFEQPILTAEVDAIGVLRILEALRT-V--KPDTKFYQASTSEM  130 (345)
T ss_dssp             --CCSEEEECCCCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHH-H--CTTCEEEEEEEGGG
T ss_pred             --CCCEEEECCCCcch------hhhhhCHHHHHHHHHHHHHHHHHHHHH-h--CCCceEEEEechhh
Confidence              48999999997532      223456788999999999999999875 2  11389999999853

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.72  E-value=8.5e-18  Score=138.09  Aligned_cols=128  Identities=11%  Similarity=0.120  Sum_probs=93.5

Q ss_pred             CCCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHH
Q 045749           55 QPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        55 ~~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      +..+.++.+++++||||+++||++++++|+++|++|++++|+.+...+..++      -.++.++.+|+++..    .++
T Consensus        12 ~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------l~~v~~~~~Dl~d~~----~~~   81 (330)
T 2pzm_A           12 SGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP------VAGLSVIEGSVTDAG----LLE   81 (330)
T ss_dssp             --CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS------CTTEEEEECCTTCHH----HHH
T ss_pred             cCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc------cCCceEEEeeCCCHH----HHH
Confidence            3344556799999999999999999999999999999999975432211111      135677888888763    233


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          135 AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++.+..   ++|++|||||....      . +.++++  +++|+.++.++++++..    .+.++||++||.++
T Consensus        82 ~~~~~~---~~D~vih~A~~~~~------~-~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~  139 (330)
T 2pzm_A           82 RAFDSF---KPTHVVHSAAAYKD------P-DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALC  139 (330)
T ss_dssp             HHHHHH---CCSEEEECCCCCSC------T-TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGG
T ss_pred             HHHhhc---CCCEEEECCccCCC------c-cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHH
Confidence            333333   48999999997532      1 345555  99999999999999763    45689999999865

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.71  E-value=9.1e-17  Score=132.98  Aligned_cols=125  Identities=19%  Similarity=0.324  Sum_probs=98.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHc-CC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQH-GL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~-G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++|+++||||+|+||++++++|+++ |+ +|++++|++.+.++..+++.    ..++.++.+|+++.       +.+.+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~-------~~l~~   87 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDL-------ERLNY   87 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCH-------HHHHH
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCH-------HHHHH
Confidence            56899999999999999999999999 98 99999999888776655552    34678888898865       23334


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .+.  ++|++|||||.....      ...++.++.+++|+.|+.++++++.+.    +.+++|++||..+
T Consensus        88 ~~~--~~D~Vih~Aa~~~~~------~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~  145 (344)
T 2gn4_A           88 ALE--GVDICIHAAALKHVP------IAEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKA  145 (344)
T ss_dssp             HTT--TCSEEEECCCCCCHH------HHHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGG
T ss_pred             HHh--cCCEEEECCCCCCCC------chhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCcc
Confidence            444  589999999975421      122345679999999999999998763    5689999999764

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.71  E-value=3.5e-17  Score=136.08  Aligned_cols=132  Identities=20%  Similarity=0.167  Sum_probs=89.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH-HHHHHHHhhC--CCceeEEEEEecccCccchhhHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE-KISNEIQAEN--PNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~-~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +|+++||||+|+||++++++|+++|++|++++|+.+... +..+++....  .+.++.++.+|++++    +.++++.+.
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~----~~~~~~~~~   76 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDT----SNLTRILRE   76 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCH----HHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCH----HHHHHHHHh
Confidence            468999999999999999999999999999999865421 1111221110  124567778888765    333333333


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .   ++|++|||||....      +.+.+++++.+++|+.|+.++++++.+...+ +++++|++||.+.
T Consensus        77 ~---~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v  135 (372)
T 1db3_A           77 V---QPDEVYNLGAMSHV------AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSEL  135 (372)
T ss_dssp             H---CCSEEEECCCCCTT------TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGG
T ss_pred             c---CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhh
Confidence            3   48999999997543      2244567789999999999999998775433 2489999999754

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.70  E-value=1.6e-16  Score=123.31  Aligned_cols=106  Identities=12%  Similarity=0.242  Sum_probs=83.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHH-HcCCeEEEEecChh-HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           63 GSWALITGATDGIGKAFAHQLA-QHGLNLILVSRNHN-KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~-~~G~~Vi~~~r~~~-~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|+++||||++|||++++++|+ ++|++|++++|+++ +++++.    ..  ..++..+.+|++++       +.+.+.+
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~-------~~~~~~~   71 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNP-------GXLEQAV   71 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCH-------HHHHHHH
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCH-------HHHHHHH
Confidence            4789999999999999999999 89999999999987 655432    12  45678888998866       2333344


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .  ++|++|||||..                     |+.     ++.+++.|++++.++||++||.+++
T Consensus        72 ~--~~d~vv~~ag~~---------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~  112 (221)
T 3r6d_A           72 T--NAEVVFVGAMES---------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLS  112 (221)
T ss_dssp             T--TCSEEEESCCCC---------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTT
T ss_pred             c--CCCEEEEcCCCC---------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceec
Confidence            4  589999999842                     222     7888999998888999999998754

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.69  E-value=5.7e-17  Score=127.53  Aligned_cols=125  Identities=18%  Similarity=0.075  Sum_probs=91.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQH--GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~--G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+++++||||+++||++++++|+++  |++|++++|++++.++.         ..++.++.+|+++.       +.+.+.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~D~~d~-------~~~~~~   66 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDA-------DSINPA   66 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSH-------HHHHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc---------CCCeeEEEecCCCH-------HHHHHH
Confidence            4789999999999999999999999  89999999997665432         23456778888765       233333


Q ss_pred             hcCCCccEEEEcCCCCCCCcc-------cccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAM-------FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~-------~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +.  ++|++|||||.......       ...+.+.+++++.+++|+.++.++++++.    +.+.++||++||.++
T Consensus        67 ~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~  136 (253)
T 1xq6_A           67 FQ--GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK----VAGVKHIVVVGSMGG  136 (253)
T ss_dssp             HT--TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHH----HHTCSEEEEEEETTT
T ss_pred             Hc--CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHH----HcCCCEEEEEcCccC
Confidence            44  48999999997642110       00122234455688999999988888764    345689999999875

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.69  E-value=9.5e-17  Score=132.33  Aligned_cols=128  Identities=19%  Similarity=0.214  Sum_probs=92.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH------HHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK------LEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~------l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      +|+++||||+++||.+++++|+++|++|++++|+...      ..+..+++.... +.++.++.+|+++..    .++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~----~~~~~   76 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQG----ALQRL   76 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHH----HHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHH----HHHHH
Confidence            5789999999999999999999999999999985432      222223333211 345677888988763    23333


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .+..   ++|++|||||.....      .+.+++++.+++|+.++.++++++    .+.+.+++|++||.+.
T Consensus        77 ~~~~---~~d~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~  135 (348)
T 1ek6_A           77 FKKY---SFMAVIHFAGLKAVG------ESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATV  135 (348)
T ss_dssp             HHHC---CEEEEEECCSCCCHH------HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGG
T ss_pred             HHhc---CCCEEEECCCCcCcc------chhhchHHHHHHHHHHHHHHHHHH----HHhCCCEEEEECcHHH
Confidence            3322   599999999975321      134567789999999999998874    4456689999999764

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.69  E-value=6.3e-17  Score=134.03  Aligned_cols=129  Identities=15%  Similarity=0.075  Sum_probs=96.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+++++||||+|+||++++++|+++|++|++++|+.++.++..+.+.   ...++.++.+|+++..    .++++.+..
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~----~~~~~~~~~   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQN----KLLESIREF   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHH----HHHHHHHHH
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc---cCCceEEEEccccCHH----HHHHHHHhc
Confidence            457899999999999999999999999999999998765444333332   1346778888988763    233333332


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                         ++|++|||||....      +.+.+++++.+++|+.|+.++++++.+.   .+.+++|++||.+.
T Consensus        80 ---~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~v  135 (357)
T 1rkx_A           80 ---QPEIVFHMAAQPLV------RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKC  135 (357)
T ss_dssp             ---CCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGG
T ss_pred             ---CCCEEEECCCCccc------ccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHH
Confidence               48999999996321      2345677889999999999999998752   23579999999763

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.69  E-value=1.5e-16  Score=130.94  Aligned_cols=126  Identities=14%  Similarity=0.095  Sum_probs=93.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~-~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      ++++||||+|+||++++++|+++|++|++++|+. ...++..+++..   ..++.++.+|+++..    .++++.+..  
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~~----~~~~~~~~~--   72 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKN----DVTRLITKY--   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHH----HHHHHHHHH--
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCHH----HHHHHHhcc--
Confidence            4799999999999999999999999999999853 223333344433   235777888988763    233333322  


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       ++|++|||||....      +.+.+++++.+++|+.|+.++++++.+.+.   +++||++||.+.
T Consensus        73 -~~d~vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v  128 (347)
T 1orr_A           73 -MPDSCFHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKV  128 (347)
T ss_dssp             -CCSEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGG
T ss_pred             -CCCEEEECCcccCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHH
Confidence             58999999996432      224556788999999999999999987642   379999999764

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.67  E-value=1.8e-16  Score=130.40  Aligned_cols=129  Identities=19%  Similarity=0.202  Sum_probs=97.6

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcC-------CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccc
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHG-------LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVS  129 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G-------~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~  129 (210)
                      .++.+.+++++||||+|+||.+++++|+++|       ++|++++|+.++..+        ....++.++.+|+++..+.
T Consensus         8 ~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~   79 (342)
T 2hrz_A            8 ENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEA   79 (342)
T ss_dssp             CCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHH
T ss_pred             CCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHH
Confidence            4456779999999999999999999999999       899999998643221        1145678888999877432


Q ss_pred             hhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEeccccc
Q 045749          130 AGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGSGAA  208 (210)
Q Consensus       130 ~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS~ag  208 (210)
                          +++.+  +  ++|++|||||...       ..+.+++++.+++|+.|+.++++++.+...++ +.++||++||.+.
T Consensus        80 ----~~~~~--~--~~d~vih~A~~~~-------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~  144 (342)
T 2hrz_A           80 ----EKLVE--A--RPDVIFHLAAIVS-------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAV  144 (342)
T ss_dssp             ----HHHHH--T--CCSEEEECCCCCH-------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGG
T ss_pred             ----HHHHh--c--CCCEEEECCccCc-------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHh
Confidence                22222  2  5899999999642       12456788999999999999999987643322 2589999999865

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.67  E-value=7.6e-16  Score=129.14  Aligned_cols=130  Identities=14%  Similarity=0.159  Sum_probs=94.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHH-HcCCeEEEEecChhH---------HHHHHHHHHhhCC---Cce---eEEEEEecccC
Q 045749           63 GSWALITGATDGIGKAFAHQLA-QHGLNLILVSRNHNK---------LEKISNEIQAENP---NTQ---INIVEYDFSCD  126 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~-~~G~~Vi~~~r~~~~---------l~~~~~~l~~~~~---~~~---~~~~~~D~~~~  126 (210)
                      +++++||||+++||.+++++|+ ++|++|++++|+...         .+.+.+.+++...   ..+   +.++.+|+++.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4579999999999999999999 999999999997654         3444333433321   123   77888898876


Q ss_pred             ccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      .    .++++.+..+  ++|++|||||.....      .+.+++++.+++|+.++.++++++    ++.+.++||++||.
T Consensus        82 ~----~~~~~~~~~~--~~d~vih~A~~~~~~------~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~~~iv~~SS~  145 (397)
T 1gy8_A           82 D----FLNGVFTRHG--PIDAVVHMCAFLAVG------ESVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSA  145 (397)
T ss_dssp             H----HHHHHHHHSC--CCCEEEECCCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEG
T ss_pred             H----HHHHHHHhcC--CCCEEEECCCccCcC------cchhhHHHHHHHHhHHHHHHHHHH----HHhCCCEEEEECCH
Confidence            3    3333433332  499999999975331      144667889999999999999985    34566899999996


Q ss_pred             cc
Q 045749          207 AA  208 (210)
Q Consensus       207 ag  208 (210)
                      +.
T Consensus       146 ~v  147 (397)
T 1gy8_A          146 AI  147 (397)
T ss_dssp             GG
T ss_pred             HH
Confidence            53

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.67  E-value=1.5e-16  Score=132.86  Aligned_cols=130  Identities=18%  Similarity=0.123  Sum_probs=94.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH-----HHHHHHHHHhhCCCc-eeEEEEEecccCccchhhHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK-----LEKISNEIQAENPNT-QINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~-----l~~~~~~l~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      |+++||||+|+||.+++++|+++|++|++++|+.++     +++..++....  +. ++.++.+|+++..    .++++.
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~----~~~~~~  102 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDAS----SLRRWI  102 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHH----HHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc--cccceEEEECCCCCHH----HHHHHH
Confidence            789999999999999999999999999999998653     22222221111  12 5778888887653    233333


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEeccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGSGAA  208 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS~ag  208 (210)
                      +..   ++|++|||||....      +.+.++++..+++|+.|+.++++++.+...++ +++++|++||.+.
T Consensus       103 ~~~---~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~v  165 (381)
T 1n7h_A          103 DVI---KPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEM  165 (381)
T ss_dssp             HHH---CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGG
T ss_pred             Hhc---CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHH
Confidence            332   48999999996532      12456678899999999999999999977553 3479999999764

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.66  E-value=4.2e-16  Score=128.92  Aligned_cols=128  Identities=13%  Similarity=0.124  Sum_probs=94.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh----HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN----KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~----~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      +.+++++||||+|+||++++++|+++|++|++++|+..    .++++.+++.... ..++.++.+|+++.    +   .+
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~----~---~~   96 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQ-WSNFKFIQGDIRNL----D---DC   96 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHH-HTTEEEEECCTTSH----H---HH
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhccccc-CCceEEEECCCCCH----H---HH
Confidence            45789999999999999999999999999999999753    3333332221100 13577888888765    2   23


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .+.+.  ++|++|||||.....      .+.+++++.+++|+.++.++++++.+    .+.+++|++||.+.
T Consensus        97 ~~~~~--~~d~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~  156 (352)
T 1sb8_A           97 NNACA--GVDYVLHQAALGSVP------RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSST  156 (352)
T ss_dssp             HHHHT--TCSEEEECCSCCCHH------HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGG
T ss_pred             HHHhc--CCCEEEECCcccCch------hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHh
Confidence            33343  589999999965321      13466788999999999999998764    35689999999865

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.66  E-value=1.2e-16  Score=130.28  Aligned_cols=119  Identities=20%  Similarity=0.224  Sum_probs=90.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ..++++||||+|+||++++++|+++|++|++++|+.+. +.    +       ++.++.+|+++..    .++++.+.  
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-------~~~~~~~Dl~d~~----~~~~~~~~--   72 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-------NVEMISLDIMDSQ----RVKKVISD--   72 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-------TEEEEECCTTCHH----HHHHHHHH--
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-------eeeEEECCCCCHH----HHHHHHHh--
Confidence            46899999999999999999999999999999998654 21    1       4677788887653    23333332  


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       .++|++|||||....      +.+.+++++.+++|+.|+.++++++ +.+  .+.+++|++||.+.
T Consensus        73 -~~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v  129 (321)
T 2pk3_A           73 -IKPDYIFHLAAKSSV------KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEE  129 (321)
T ss_dssp             -HCCSEEEECCSCCCH------HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGG
T ss_pred             -cCCCEEEEcCcccch------hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHh
Confidence             258999999997532      1123457789999999999999998 544  34689999999864

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.66  E-value=4.6e-16  Score=128.43  Aligned_cols=130  Identities=13%  Similarity=0.081  Sum_probs=97.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCC---ceeEEEEEecccCccchhhHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPN---TQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ...+++++||||+|+||++++++|+++|++|++++|+.....+..+++....+.   .++.++.+|+++.       +.+
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-------~~~   94 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDL-------TTC   94 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCH-------HHH
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCH-------HHH
Confidence            345899999999999999999999999999999999765444444444432211   4678888998765       234


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .+.+.  ++|++||+||....      ..+.++.+..+++|+.++.++++++.    +.+.+++|++||.+.
T Consensus        95 ~~~~~--~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~v~~SS~~v  154 (351)
T 3ruf_A           95 EQVMK--GVDHVLHQAALGSV------PRSIVDPITTNATNITGFLNILHAAK----NAQVQSFTYAASSST  154 (351)
T ss_dssp             HHHTT--TCSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEGGG
T ss_pred             HHHhc--CCCEEEECCccCCc------chhhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEecHHh
Confidence            44444  58999999996532      22445677899999999999998864    345679999999764

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.66  E-value=1.6e-16  Score=132.49  Aligned_cols=130  Identities=18%  Similarity=0.118  Sum_probs=91.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH-----HHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK-----LEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~-----l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      |+++||||+++||++++++|+++|++|++++|+.+.     +++..++.... ...++.++.+|+++..    .++++.+
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~----~~~~~~~   99 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDST----CLVKIIN   99 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHH----HHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCHH----HHHHHHH
Confidence            689999999999999999999999999999998543     22211111100 1345777888887663    2333333


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ..   ++|++|||||....      +.+.+++++.+++|+.|+.++++++.+... ++.++||++||.+.
T Consensus       100 ~~---~~d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~~  159 (375)
T 1t2a_A          100 EV---KPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSEL  159 (375)
T ss_dssp             HH---CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGG
T ss_pred             hc---CCCEEEECCCcccc------cccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchhh
Confidence            32   48999999996432      123566788999999999999999877543 22379999999765

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.65  E-value=3.1e-16  Score=128.83  Aligned_cols=126  Identities=19%  Similarity=0.223  Sum_probs=87.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+++||++++++|+++|++|++++|......+..+++.+.. +.++.++.+|++++.    .++++.+..   +
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~----~~~~~~~~~---~   73 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEA----LMTEILHDH---A   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHH----HHHHHHHHT---T
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHH----HHHHHhhcc---C
Confidence            58999999999999999999999999999874322111122222211 335677788887653    233333322   5


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +|++|||||......      +.++.++.+++|+.|+.++++++    ++.+.++||++||.+.
T Consensus        74 ~D~vih~A~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~  127 (338)
T 1udb_A           74 IDTVIHFAGLKAVGE------SVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATV  127 (338)
T ss_dssp             CSEEEECCSCCCHHH------HHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGG
T ss_pred             CCEEEECCccCcccc------chhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHH
Confidence            899999999653211      23445678999999999998864    4455689999999764

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.65  E-value=7.8e-16  Score=126.86  Aligned_cols=117  Identities=20%  Similarity=0.147  Sum_probs=86.3

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      +..+..+|+++||||+|+||.+++++|+++|++|++++|+.+.              .++.++.+|+++.       +.+
T Consensus        13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~-------~~~   71 (347)
T 4id9_A           13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDG-------QAL   71 (347)
T ss_dssp             --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCH-------HHH
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCH-------HHH
Confidence            3445678999999999999999999999999999999998654              3456677888765       233


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .+.+.  ++|++||+||....        +.+++++.+++|+.|+.++++++.    +.+.+++|++||.+.
T Consensus        72 ~~~~~--~~d~vih~A~~~~~--------~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~V~~SS~~v  129 (347)
T 4id9_A           72 SDAIM--GVSAVLHLGAFMSW--------APADRDRMFAVNVEGTRRLLDAAS----AAGVRRFVFASSGEV  129 (347)
T ss_dssp             HHHHT--TCSEEEECCCCCCS--------SGGGHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEGGG
T ss_pred             HHHHh--CCCEEEECCcccCc--------chhhHHHHHHHHHHHHHHHHHHHH----HcCCCeEEEECCHHH
Confidence            33444  58999999996533        334458899999999999998864    356679999999653

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.65  E-value=8.9e-16  Score=126.13  Aligned_cols=127  Identities=14%  Similarity=0.175  Sum_probs=90.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++|+++||||+|+||.+++++|+++|++|+++.|+.+..++.. .+.+... ..++.++.+|++++.+..+.       +
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-------~   75 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLDLPKAETHLTLWKADLADEGSFDEA-------I   75 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHTSTTHHHHEEEEECCTTSTTTTHHH-------H
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHhcccCCCeEEEEEcCCCCHHHHHHH-------H
Confidence            4789999999999999999999999999999999876543332 1211100 13577888999887443332       2


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .  .+|++||+|+...     ....  +..++.+++|+.|+.++++++.+..   +.++||++||.++
T Consensus        76 ~--~~d~Vih~A~~~~-----~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~  131 (337)
T 2c29_D           76 K--GCTGVFHVATPMD-----FESK--DPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGT  131 (337)
T ss_dssp             T--TCSEEEECCCCCC-----SSCS--SHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGG
T ss_pred             c--CCCEEEEeccccC-----CCCC--ChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhh
Confidence            3  4789999998541     1111  2235689999999999999987632   2579999999874

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.65  E-value=2.4e-16  Score=129.56  Aligned_cols=123  Identities=15%  Similarity=0.148  Sum_probs=88.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+.+++++||||+|+||++++++|+++|++|++++|+.....+   .+..   ..++.++.+|+++..    .++++.+.
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~---~~~~~~~~~Dl~d~~----~~~~~~~~   87 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKD---HPNLTFVEGSIADHA----LVNQLIGD   87 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCC---CTTEEEEECCTTCHH----HHHHHHHH
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhh---cCCceEEEEeCCCHH----HHHHHHhc
Confidence            3568999999999999999999999999999999997543211   0100   135677888888763    23333322


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .   ++|++|||||.....       +.++++  +++|+.++.++++++.+    .+.++||++||.+.
T Consensus        88 ~---~~D~vih~A~~~~~~-------~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~  140 (333)
T 2q1w_A           88 L---QPDAVVHTAASYKDP-------DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALC  140 (333)
T ss_dssp             H---CCSEEEECCCCCSCT-------TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGG
T ss_pred             c---CCcEEEECceecCCC-------ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHH
Confidence            1   589999999975321       234444  99999999999999865    45689999999764

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.64  E-value=3.3e-15  Score=125.45  Aligned_cols=133  Identities=16%  Similarity=0.101  Sum_probs=93.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH----------------HHHHHHHhhCCCceeEEEEEecc
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE----------------KISNEIQAENPNTQINIVEYDFS  124 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~----------------~~~~~l~~~~~~~~~~~~~~D~~  124 (210)
                      .++..++||||+|.||.+++++|+++|++|++++|+.....                +..+++.... ..++.++.+|++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~Dl~   87 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDIC   87 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTT
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEECCCC
Confidence            45889999999999999999999999999999998754321                1111111111 345778888888


Q ss_pred             cCccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCC-CEEEEe
Q 045749          125 CDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKK-GAIVNI  203 (210)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~-g~iv~i  203 (210)
                      ++.    .++++.+..   ++|++|||||.....   ....++++++..+++|+.|+.++++++.+.    +. .++|++
T Consensus        88 d~~----~~~~~~~~~---~~D~Vih~A~~~~~~---~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~  153 (404)
T 1i24_A           88 DFE----FLAESFKSF---EPDSVVHFGEQRSAP---YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKL  153 (404)
T ss_dssp             SHH----HHHHHHHHH---CCSEEEECCSCCCHH---HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEE
T ss_pred             CHH----HHHHHHhcc---CCCEEEECCCCCCcc---chhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEe
Confidence            663    333333332   489999999975432   112367778889999999999999997653    33 499999


Q ss_pred             ccccc
Q 045749          204 GSGAA  208 (210)
Q Consensus       204 sS~ag  208 (210)
                      ||.+.
T Consensus       154 SS~~v  158 (404)
T 1i24_A          154 GTMGE  158 (404)
T ss_dssp             CCGGG
T ss_pred             CcHHH
Confidence            99754

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.63  E-value=1.2e-15  Score=124.19  Aligned_cols=112  Identities=16%  Similarity=0.215  Sum_probs=63.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +++++||||+|+||++++++|+++|++|++++|+.++            ++    ++.+|+++..+..+.++.    .  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~----~~~~Dl~d~~~~~~~~~~----~--   59 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------PK----FEQVNLLDSNAVHHIIHD----F--   59 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHH----H--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------CC----eEEecCCCHHHHHHHHHh----h--
Confidence            6789999999999999999999999999999987543            01    566788877544443322    2  


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       ++|++|||||....      +.+.+++++.+++|+.++.++++++.+.    + +++|++||.+.
T Consensus        60 -~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v  113 (315)
T 2ydy_A           60 -QPHVIVHCAAERRP------DVVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYV  113 (315)
T ss_dssp             -CCSEEEECC-------------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGG
T ss_pred             -CCCEEEECCcccCh------hhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHH
Confidence             48999999997533      2255678889999999999999998752    3 59999999865

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.63  E-value=7.8e-16  Score=120.70  Aligned_cols=107  Identities=21%  Similarity=0.178  Sum_probs=81.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ...|+++||||++|||++++++|+++| ++|++++|+++++++.        ....+.++.+|++++       +.+.+.
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~-------~~~~~~   85 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNH-------AALKQA   85 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCH-------HHHHHH
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCH-------HHHHHH
Confidence            346899999999999999999999999 8999999998764321        134677888898865       233444


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +.  .+|++|||||..          +.+              ..++.+++.|++++.++||++||.++
T Consensus        86 ~~--~~D~vv~~a~~~----------~~~--------------~~~~~~~~~~~~~~~~~iV~iSS~~~  128 (236)
T 3qvo_A           86 MQ--GQDIVYANLTGE----------DLD--------------IQANSVIAAMKACDVKRLIFVLSLGI  128 (236)
T ss_dssp             HT--TCSEEEEECCST----------THH--------------HHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred             hc--CCCEEEEcCCCC----------chh--------------HHHHHHHHHHHHcCCCEEEEEeccee
Confidence            44  479999999841          011              23567888898888899999999765

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.63  E-value=1.6e-15  Score=125.74  Aligned_cols=143  Identities=11%  Similarity=-0.022  Sum_probs=105.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHH-HcCCeEEEEecChhH------------HHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLA-QHGLNLILVSRNHNK------------LEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~-~~G~~Vi~~~r~~~~------------l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      ...+|++||||||+|||++.+..++ +.|+.++++++..+.            .+...+++++.  +.+...+.+|++++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~--G~~a~~i~~Dv~d~  124 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE--GLYSVTIDGDAFSD  124 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH--TCCEEEEESCTTSH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc--CCCceeEeCCCCCH
Confidence            4558999999999999999999999 789999999886432            33445566666  67888999999999


Q ss_pred             ccchhhHHHHHHHhcCCCccEEEEcCCCCCCCc-----------c---------------------cccCCCHHHHHH--
Q 045749          127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKA-----------M---------------------FFHEVDEKEWMD--  172 (210)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~-----------~---------------------~~~~~~~~~~~~--  172 (210)
                      +..++.++++.+.++  ++|+||||++......           .                     .+...+.++++.  
T Consensus       125 e~i~~vi~~i~~~~G--~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~  202 (401)
T 4ggo_A          125 EIKAQVIEEAKKKGI--KFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATV  202 (401)
T ss_dssp             HHHHHHHHHHHHTTC--CEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcC--CCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHH
Confidence            999999999998887  6999999999763210           0                     011234555554  


Q ss_pred             -HhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          173 -IVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       173 -~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       .|....++.+...+...+.|  .++++++.+|+..+
T Consensus       203 ~vMg~s~~s~w~~al~~a~ll--a~G~siva~SYiGs  237 (401)
T 4ggo_A          203 KVMGGEDWERWIKQLSKEGLL--EEGCITLAYSYIGP  237 (401)
T ss_dssp             HHHSSHHHHHHHHHHHHTTCE--EEEEEEEEEECCCC
T ss_pred             HHHhhhHHHHHHHHHHhhhcc--cCCceEEEEeccCc
Confidence             45556666666666666655  33589999998765

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.62  E-value=4e-16  Score=129.59  Aligned_cols=127  Identities=9%  Similarity=0.109  Sum_probs=89.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHH--cCCeEEEEecChhHHHHHH------HHHHhhCCCceeEEEEEecccCccch
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQ--HGLNLILVSRNHNKLEKIS------NEIQAENPNTQINIVEYDFSCDVVSA  130 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~--~G~~Vi~~~r~~~~l~~~~------~~l~~~~~~~~~~~~~~D~~~~~~~~  130 (210)
                      +++.+++++||||+|+||++++++|++  +|++|++++|+........      ..... ..+..+.++.+|+++.    
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~----   80 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKN-LIGFKGEVIAADINNP----   80 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGG-GTTCCSEEEECCTTCH----
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhh-ccccCceEEECCCCCH----
Confidence            456789999999999999999999999  9999999999764211000      00011 1134567888898876    


Q ss_pred             hhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          131 GNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       131 ~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +.++++  ...  ++|++|||||....        +.+++++.+++|+.|+.++++++.    +. ++++|++||.+
T Consensus        81 ~~~~~~--~~~--~~D~vih~A~~~~~--------~~~~~~~~~~~Nv~gt~~ll~aa~----~~-~~~~V~~SS~~  140 (362)
T 3sxp_A           81 LDLRRL--EKL--HFDYLFHQAAVSDT--------TMLNQELVMKTNYQAFLNLLEIAR----SK-KAKVIYASSAG  140 (362)
T ss_dssp             HHHHHH--TTS--CCSEEEECCCCCGG--------GCCCHHHHHHHHTHHHHHHHHHHH----HT-TCEEEEEEEGG
T ss_pred             HHHHHh--hcc--CCCEEEECCccCCc--------cccCHHHHHHHHHHHHHHHHHHHH----Hc-CCcEEEeCcHH
Confidence            222332  122  69999999995422        335567899999999999999873    23 35699999954

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.62  E-value=7.5e-16  Score=119.29  Aligned_cols=108  Identities=15%  Similarity=0.307  Sum_probs=86.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEeccc-CccchhhHHHHHHHhcCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC-DVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~  143 (210)
                      +++||||+|+||++++++|+++|++|++++|+++++++.          .++.++.+|+++ .       +.+.+.+.  
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~-------~~~~~~~~--   62 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTP-------EEMAKQLH--   62 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCH-------HHHHTTTT--
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCH-------HHHHHHHc--
Confidence            589999999999999999999999999999998654321          467888899887 4       33444444  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|++|||||....              +.+++|+.++.++++++    ++.+.+++|++||..+.
T Consensus        63 ~~d~vi~~ag~~~~--------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~  110 (219)
T 3dqp_A           63 GMDAIINVSGSGGK--------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSL  110 (219)
T ss_dssp             TCSEEEECCCCTTS--------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTT
T ss_pred             CCCEEEECCcCCCC--------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECccccc
Confidence            58999999997531              27889999999888885    45566899999998764

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.62  E-value=3.7e-16  Score=127.35  Aligned_cols=126  Identities=15%  Similarity=0.197  Sum_probs=83.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHHHHHh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ||+++||||+|+||++++++|+++|++|++++| +.+..++. +.+.+... ..++.++.+|++++.+..+       .+
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-------~~   72 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNLPGASEKLHFFNADLSNPDSFAA-------AI   72 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTSTTHHHHEEECCCCTTCGGGGHH-------HH
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhhhccCCceEEEecCCCCHHHHHH-------HH
Confidence            578999999999999999999999999999998 65321111 11111100 1246677788887643322       23


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .  .+|++||||+..   .  .  ...+.+++.+++|+.|+.++++++.+.   .+.++||++||.++
T Consensus        73 ~--~~d~vih~A~~~---~--~--~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~~~~iV~~SS~~~  128 (322)
T 2p4h_X           73 E--GCVGIFHTASPI---D--F--AVSEPEEIVTKRTVDGALGILKACVNS---KTVKRFIYTSSGSA  128 (322)
T ss_dssp             T--TCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHTTC---SSCCEEEEEEEGGG
T ss_pred             c--CCCEEEEcCCcc---c--C--CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccHHH
Confidence            3  479999999632   1  1  111224568999999999999997653   14579999999874

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.62  E-value=1.1e-15  Score=125.41  Aligned_cols=128  Identities=13%  Similarity=0.083  Sum_probs=90.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+++++||||+|+||++++++|+++|++|++++|+.++...  ..+.......++.++.+|+++..    .++++.+.. 
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~----~~~~~~~~~-   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELGIEGDIQYEDGDMADAC----SVQRAVIKA-   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTTCGGGEEEEECCTTCHH----HHHHHHHHH-
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc--cchhhccccCceEEEECCCCCHH----HHHHHHHHc-
Confidence            47899999999999999999999999999999998654210  01111111346778888887653    233333332 


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEeccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAA  208 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag  208 (210)
                        ++|++|||||.....      .+.+++++.+++|+.|+.++++++.+.    + .+++|++||.+.
T Consensus        86 --~~d~Vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v  141 (335)
T 1rpn_A           86 --QPQEVYNLAAQSFVG------ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEM  141 (335)
T ss_dssp             --CCSEEEECCSCCCHH------HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGG
T ss_pred             --CCCEEEECccccchh------hhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHH
Confidence              489999999964321      122446789999999999999987543    4 379999999754

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.62  E-value=3.9e-15  Score=126.34  Aligned_cols=124  Identities=17%  Similarity=0.180  Sum_probs=91.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh---HHHHHHHHHHhhCC-------CceeEEEEEecccCccch
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN---KLEKISNEIQAENP-------NTQINIVEYDFSCDVVSA  130 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~---~l~~~~~~l~~~~~-------~~~~~~~~~D~~~~~~~~  130 (210)
                      ..+++++||||+|+||++++++|+++|++|++++|+++   ..+++.+.++..++       ..++.++.+|+++.....
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            45789999999999999999999999999999999977   44444444433221       357889999999865554


Q ss_pred             hhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          131 GNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       131 ~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                              ...  ++|++|||||...         ..+++++.+++|+.|+.++++++.+     +.+++|++||.++
T Consensus       147 --------~~~--~~d~Vih~A~~~~---------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~  200 (427)
T 4f6c_A          147 --------LPE--NMDTIIHAGARTD---------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV  200 (427)
T ss_dssp             --------CSS--CCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGG
T ss_pred             --------CcC--CCCEEEECCcccC---------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHh
Confidence                    222  6999999999753         1245678999999999999999865     4579999999764

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.61  E-value=3e-15  Score=122.96  Aligned_cols=124  Identities=19%  Similarity=0.214  Sum_probs=86.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH--HHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS--NEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~--~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +|+++||||+|+||++++++|+++|++|+++.|+.++.++..  .++. .  ..++.++.+|++++.+..+.       +
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~~~~~~~-------~   78 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E--LGDLKIFRADLTDELSFEAP-------I   78 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G--GSCEEEEECCTTTSSSSHHH-------H
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C--CCcEEEEecCCCChHHHHHH-------H
Confidence            789999999999999999999999999999999865432111  1221 1  23577888999887544432       2


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .  .+|++||+||....     .  ..+..++.+++|+.|+.++++++.+..   +.++||++||.++
T Consensus        79 ~--~~D~Vih~A~~~~~-----~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~  134 (338)
T 2rh8_A           79 A--GCDFVFHVATPVHF-----A--SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAA  134 (338)
T ss_dssp             T--TCSEEEEESSCCCC----------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHH
T ss_pred             c--CCCEEEEeCCccCC-----C--CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHH
Confidence            2  37999999985411     1  112224589999999999999976532   2579999999763

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.61  E-value=2e-15  Score=125.00  Aligned_cols=126  Identities=14%  Similarity=0.141  Sum_probs=92.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCh--hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           65 WALITGATDGIGKAFAHQLAQH-GLNLILVSRNH--NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +++||||+|+||++++++|+++ |++|++++|+.  ...+.+ +++.   ...++.++.+|+++..    .++++.+.. 
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~----~~~~~~~~~-   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS---ESNRYNFEHADICDSA----EITRIFEQY-   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCHH----HHHHHHHHH-
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh---cCCCeEEEECCCCCHH----HHHHHHhhc-
Confidence            4899999999999999999998 79999999864  222221 1111   1346778888988763    233333322 


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-----CCEEEEecccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-----KGAIVNIGSGA  207 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-----~g~iv~isS~a  207 (210)
                        ++|++|||||....      +.+.+++++.+++|+.|+.++++++.+.|...+     .++||++||.+
T Consensus        73 --~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~  135 (361)
T 1kew_A           73 --QPDAVMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE  135 (361)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG
T ss_pred             --CCCEEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHH
Confidence              58999999997532      224566788999999999999999999875422     36999999965

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.61  E-value=1e-15  Score=125.59  Aligned_cols=123  Identities=12%  Similarity=0.149  Sum_probs=89.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecChh--HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHG--LNLILVSRNHN--KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~--~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++++||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +++   ....++.++.+|+++..    .+++   
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~---~~~~~~~~~~~Dl~d~~----~~~~---   71 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDL---EDDPRYTFVKGDVADYE----LVKE---   71 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTT---TTCTTEEEEECCTTCHH----HHHH---
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhh---ccCCceEEEEcCCCCHH----HHHH---
Confidence            5679999999999999999999997  89999998642  11111 111   11346778888988762    2222   


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      .+.  ++|++|||||....      +.+.+++++.+++|+.|+.++++++.+.   ...++||++||.+
T Consensus        72 ~~~--~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~  129 (336)
T 2hun_A           72 LVR--KVDGVVHLAAESHV------DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDE  129 (336)
T ss_dssp             HHH--TCSEEEECCCCCCH------HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGG
T ss_pred             Hhh--CCCEEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHH
Confidence            233  58999999997532      2245667789999999999999998875   2247999999975

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.60  E-value=1.2e-14  Score=112.02  Aligned_cols=105  Identities=17%  Similarity=0.254  Sum_probs=79.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+|+||++++++|+++|++|++++|+++++++..         ..+.++.+|+++..+         +.+.  +
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~---------~~~~--~   61 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTL---------SDLS--D   61 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCH---------HHHT--T
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhh---------hhhc--C
Confidence            5899999999999999999999999999999987655431         356788999988843         3344  5


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +|++|||||....               ..++|+.+    ++.+++.+++.+.+++|++||.++
T Consensus        62 ~d~vi~~ag~~~~---------------~~~~~~~~----~~~l~~a~~~~~~~~~v~~SS~~~  106 (221)
T 3ew7_A           62 QNVVVDAYGISPD---------------EAEKHVTS----LDHLISVLNGTVSPRLLVVGGAAS  106 (221)
T ss_dssp             CSEEEECCCSSTT---------------TTTSHHHH----HHHHHHHHCSCCSSEEEEECCCC-
T ss_pred             CCEEEECCcCCcc---------------ccchHHHH----HHHHHHHHHhcCCceEEEEecceE
Confidence            8999999997321               12335444    555666677777799999999875

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.59  E-value=1.4e-14  Score=112.22  Aligned_cols=107  Identities=14%  Similarity=0.158  Sum_probs=81.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+|+||++++++|+++|++|++++|+++++++..        ...+.++.+|+++..+         +.+.  +
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~~D~~d~~~---------~~~~--~   62 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--------GATVATLVKEPLVLTE---------ADLD--S   62 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--------CTTSEEEECCGGGCCH---------HHHT--T
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc--------CCCceEEecccccccH---------hhcc--c
Confidence            4899999999999999999999999999999987765331        3467888999998843         3344  5


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +|++|||||.....     +        ..++|+.++    +.+++.+++.+ +++|++||.++
T Consensus        63 ~d~vi~~ag~~~~~-----~--------~~~~n~~~~----~~l~~a~~~~~-~~~v~~SS~~~  108 (224)
T 3h2s_A           63 VDAVVDALSVPWGS-----G--------RGYLHLDFA----THLVSLLRNSD-TLAVFILGSAS  108 (224)
T ss_dssp             CSEEEECCCCCTTS-----S--------CTHHHHHHH----HHHHHTCTTCC-CEEEEECCGGG
T ss_pred             CCEEEECCccCCCc-----c--------hhhHHHHHH----HHHHHHHHHcC-CcEEEEeccee
Confidence            89999999976211     1        134566665    55566677777 99999999765

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.58  E-value=1.3e-15  Score=125.51  Aligned_cols=129  Identities=16%  Similarity=0.143  Sum_probs=87.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ..+++++||||+|+||.+++++|+++|  ++|+..+|......  .+.+.......++.++.+|+++..    .++++.+
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~----~~~~~~~   95 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGE----LLEHVIK   95 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHH----HHHHHHH
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHH----HHHHHHh
Confidence            457899999999999999999999999  67777777642110  111222222357888999988763    2333333


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ..   ++|++||+||.....      .+.+++++.+++|+.|+.++++++.+    .+.+++|++||.+.
T Consensus        96 ~~---~~d~Vih~A~~~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~v  152 (346)
T 4egb_A           96 ER---DVQVIVNFAAESHVD------RSIENPIPFYDTNVIGTVTLLELVKK----YPHIKLVQVSTDEV  152 (346)
T ss_dssp             HH---TCCEEEECCCCC---------------CHHHHHHTHHHHHHHHHHHH----STTSEEEEEEEGGG
T ss_pred             hc---CCCEEEECCcccchh------hhhhCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeCchHH
Confidence            22   589999999976432      24566778999999999999888643    46679999999754

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.58  E-value=3.5e-15  Score=115.84  Aligned_cols=111  Identities=14%  Similarity=0.231  Sum_probs=83.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      ++++||||+|+||++++++|+++|++|++++|++++.++.         ...+.++.+|+++.       +.+.+.+.  
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~-------~~~~~~~~--   66 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSL-------DEVCEVCK--   66 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCH-------HHHHHHHT--
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCH-------HHHHHHhc--
Confidence            6899999999999999999999999999999997764321         24677888888765       23344444  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++|++|||||....        +    .+.+++|+.++.++.+++    .+.+.+++|++||.++
T Consensus        67 ~~d~vi~~a~~~~~--------~----~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~  115 (227)
T 3dhn_A           67 GADAVISAFNPGWN--------N----PDIYDETIKVYLTIIDGV----KKAGVNRFLMVGGAGS  115 (227)
T ss_dssp             TCSEEEECCCC------------------CCSHHHHHHHHHHHHH----HHTTCSEEEEECCSTT
T ss_pred             CCCEEEEeCcCCCC--------C----hhHHHHHHHHHHHHHHHH----HHhCCCEEEEeCChhh
Confidence            48999999985421        1    127889999988888875    4455679999999764

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.58  E-value=1.4e-15  Score=117.04  Aligned_cols=113  Identities=13%  Similarity=0.080  Sum_probs=86.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+++++||||+++||++++++|+++|+  +|++++|++++          .  ..++..+.+|++++++..+.+      
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~--~~~~~~~~~D~~~~~~~~~~~------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRLDNPVGPLAELLPQLDGS------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTEECCBSCHHHHGGGCCSC------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c--CCCceEEeccccCHHHHHHhh------
Confidence            468899999999999999999999998  99999998764          1  234566677777653333211      


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                           +|++|||||....        +.+++++.+++|+.++..+++++.+    .+.+++|++||..+.
T Consensus        66 -----~d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~  118 (215)
T 2a35_A           66 -----IDTAFCCLGTTIK--------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGAD  118 (215)
T ss_dssp             -----CSEEEECCCCCHH--------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCC
T ss_pred             -----hcEEEECeeeccc--------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCcccC
Confidence                 7899999996421        2345678899999999999988643    456799999998653

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.58  E-value=1e-15  Score=121.93  Aligned_cols=112  Identities=23%  Similarity=0.309  Sum_probs=86.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .|+++||||+++||++++++|+++|++|++++|++++..           ...+.++.+|++++       +.+.+.+. 
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~-------~~~~~~~~-   62 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADA-------QAVHDLVK-   62 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCH-------HHHHHHHT-
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCH-------HHHHHHHc-
Confidence            368999999999999999999999999999999865310           12356777787765       23333344 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       ++|++|||||...          .+++++.+++|+.++.++++++.+    .+.++||++||.++
T Consensus        63 -~~d~vi~~a~~~~----------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~  113 (267)
T 3ay3_A           63 -DCDGIIHLGGVSV----------ERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHT  113 (267)
T ss_dssp             -TCSEEEECCSCCS----------CCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGG
T ss_pred             -CCCEEEECCcCCC----------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHH
Confidence             4899999999641          133568999999999999998754    45689999999864

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.58  E-value=5.3e-15  Score=123.69  Aligned_cols=127  Identities=14%  Similarity=-0.026  Sum_probs=93.0

Q ss_pred             CCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           56 PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        56 ~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      +..+...+++++||||+++||++++++|+++|++|++++|+.++....      .  ..++.++.+|+++.    +   .
T Consensus        22 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~--~~~v~~~~~Dl~d~----~---~   86 (379)
T 2c5a_A           22 EQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------D--MFCDEFHLVDLRVM----E---N   86 (379)
T ss_dssp             CCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------G--GTCSEEEECCTTSH----H---H
T ss_pred             cccccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------c--cCCceEEECCCCCH----H---H
Confidence            334445678999999999999999999999999999999986542210      0  23567788888765    2   2


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +.+.+.  ++|++|||||......     .+.+++++.+++|+.++.++++++.    +.+.+++|++||.+.
T Consensus        87 ~~~~~~--~~d~Vih~A~~~~~~~-----~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~~V~~SS~~v  148 (379)
T 2c5a_A           87 CLKVTE--GVDHVFNLAADMGGMG-----FIQSNHSVIMYNNTMISFNMIEAAR----INGIKRFFYASSACI  148 (379)
T ss_dssp             HHHHHT--TCSEEEECCCCCCCHH-----HHTTCHHHHHHHHHHHHHHHHHHHH----HTTCSEEEEEEEGGG
T ss_pred             HHHHhC--CCCEEEECceecCccc-----ccccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEeehhe
Confidence            333333  5899999999753211     1134567899999999999999874    345679999999754

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.58  E-value=4.5e-15  Score=133.32  Aligned_cols=131  Identities=15%  Similarity=0.171  Sum_probs=91.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+.+++++||||+++||++++++|+++|++|++++|+.....+..+++.... ..++.++.+|+++..    .++++.+.
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~----~l~~~~~~   82 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRK----GLEKVFKE   82 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHH----HHHHHHHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHH----HHHHHHHh
Confidence            3558999999999999999999999999999999997643322222332211 345677888888763    33333332


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .   ++|++|||||......      ..+..++.+++|+.++.++++++    ++.+.++||++||.+.
T Consensus        83 ~---~~D~Vih~A~~~~~~~------~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~~iV~~SS~~v  138 (699)
T 1z45_A           83 Y---KIDSVIHFAGLKAVGE------STQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATV  138 (699)
T ss_dssp             S---CCCEEEECCSCCCHHH------HHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGG
T ss_pred             C---CCCEEEECCcccCcCc------cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECcHHH
Confidence            2   5899999999753211      12334568999999999987764    4445689999999764

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.58  E-value=1.9e-15  Score=122.72  Aligned_cols=116  Identities=15%  Similarity=0.126  Sum_probs=88.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      ++++||||+|+||++++++|+++|++|++++|+.+...+..        ...+.++.+|+++.. ..+       .+.  
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~-------~~~--   62 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGA-------GIK--   62 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTT-------TCC--
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHh-------hcC--
Confidence            46999999999999999999999999999999865432211        345677888988773 222       222  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      . |++|||||....      +.+.++++..+++|+.++.++++++.    +.+.+++|++||.+.
T Consensus        63 ~-d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~v  116 (312)
T 3ko8_A           63 G-DVVFHFAANPEV------RLSTTEPIVHFNENVVATFNVLEWAR----QTGVRTVVFASSSTV  116 (312)
T ss_dssp             C-SEEEECCSSCSS------SGGGSCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGG
T ss_pred             C-CEEEECCCCCCc------hhhhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeCcHHH
Confidence            2 899999996432      33556677899999999999999874    345679999999764

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.57  E-value=7.9e-15  Score=120.43  Aligned_cols=117  Identities=20%  Similarity=0.268  Sum_probs=83.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      .+++||||+|+||++++++|+++|++|++++|+.++.++.    .    ..++.++.+|+++.       +.+.+.+.  
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~----~~~~~~~~~Dl~d~-------~~~~~~~~--   76 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----A----YLEPECRVAEMLDH-------AGLERALR--   76 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----G----GGCCEEEECCTTCH-------HHHHHHTT--
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----c----cCCeEEEEecCCCH-------HHHHHHHc--
Confidence            3799999999999999999999999999999987654321    1    12567788888765       23444444  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++|++|||||...        .+.+++++.+++|+.++.++++++.+.    +.+++|++||.+.+
T Consensus        77 ~~d~vih~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~  130 (342)
T 2x4g_A           77 GLDGVIFSAGYYP--------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAM  130 (342)
T ss_dssp             TCSEEEEC--------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGS
T ss_pred             CCCEEEECCccCc--------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhh
Confidence            4899999999642        134567789999999999999998763    45799999998653

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.57  E-value=9.2e-15  Score=119.54  Aligned_cols=120  Identities=14%  Similarity=0.164  Sum_probs=89.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      ++++||||+|+||++++++|+++|++|++++|+.....   +.+     ..++.++.+|+++..    .++++.+.   .
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~-----~~~~~~~~~D~~~~~----~~~~~~~~---~   66 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI-----TEGAKFYNGDLRDKA----FLRDVFTQ---E   66 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS-----CTTSEEEECCTTCHH----HHHHHHHH---S
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc-----CCCcEEEECCCCCHH----HHHHHHhh---c
Confidence            57999999999999999999999999999999754321   111     125677888887652    23333332   2


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++|++||+||.....      .+.+++++.+++|+.++.++++++.    +.+.+++|++||.+.
T Consensus        67 ~~d~vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~Ss~~~  121 (330)
T 2c20_A           67 NIEAVMHFAADSLVG------VSMEKPLQYYNNNVYGALCLLEVMD----EFKVDKFIFSSTAAT  121 (330)
T ss_dssp             CEEEEEECCCCCCHH------HHHHSHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEECCGGG
T ss_pred             CCCEEEECCcccCcc------ccccCHHHHHHHHhHHHHHHHHHHH----HcCCCEEEEeCCcee
Confidence            599999999975321      1446678899999999999998853    445679999999764

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.56  E-value=4.5e-15  Score=120.73  Aligned_cols=116  Identities=16%  Similarity=0.155  Sum_probs=83.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||+|+||++++++|+++|..|++..|+....+..         ...+.++.+|+++ .+..+.       +.  
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~-~~~~~~-------~~--   62 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV---------NEAARLVKADLAA-DDIKDY-------LK--   62 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS---------CTTEEEECCCTTT-SCCHHH-------HT--
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc---------CCCcEEEECcCCh-HHHHHH-------hc--
Confidence            4799999999999999999999995555544443322111         3457778889886 444332       22  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++|++||+||....      +.+.+++++.+++|+.|+.++++++    ++.+.+++|++||.+.
T Consensus        63 ~~d~vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~v  117 (313)
T 3ehe_A           63 GAEEVWHIAANPDV------RIGAENPDEIYRNNVLATYRLLEAM----RKAGVSRIVFTSTSTV  117 (313)
T ss_dssp             TCSEEEECCCCCCC------C-CCCCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEECCGGG
T ss_pred             CCCEEEECCCCCCh------hhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCchHH
Confidence            58999999995422      3355677889999999999998884    4456689999999764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.55  E-value=3.4e-14  Score=108.27  Aligned_cols=112  Identities=18%  Similarity=0.151  Sum_probs=82.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +++++||||+++||++++++|+++|++|++++|++++.++.        ...++.++.+|++++       +.+.+.+. 
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~-------~~~~~~~~-   66 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQA-------ADVDKTVA-   66 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSH-------HHHHHHHT-
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCH-------HHHHHHHc-
Confidence            47899999999999999999999999999999998654211        034577888888765       23334444 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       ++|++|||||.....     +.        .++|+.++..+.+++.    +.+.+++|++||...
T Consensus        67 -~~d~vi~~a~~~~~~-----~~--------~~~n~~~~~~~~~~~~----~~~~~~~v~~Ss~~~  114 (206)
T 1hdo_A           67 -GQDAVIVLLGTRNDL-----SP--------TTVMSEGARNIVAAMK----AHGVDKVVACTSAFL  114 (206)
T ss_dssp             -TCSEEEECCCCTTCC-----SC--------CCHHHHHHHHHHHHHH----HHTCCEEEEECCGGG
T ss_pred             -CCCEEEECccCCCCC-----Cc--------cchHHHHHHHHHHHHH----HhCCCeEEEEeeeee
Confidence             479999999965331     11        2478888877777654    445689999999864

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.55  E-value=7.9e-15  Score=121.99  Aligned_cols=121  Identities=12%  Similarity=0.223  Sum_probs=90.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecc-cCccchhhHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS-CDVVSAGNIKAIE  137 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~  137 (210)
                      ++.+++++||||+|.||.+++++|+++ |++|++++|+.++.++..    .   ..++.++.+|++ +.    +.++++ 
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----~---~~~v~~~~~Dl~~d~----~~~~~~-   88 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV----K---HERMHFFEGDITINK----EWVEYH-   88 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG----G---STTEEEEECCTTTCH----HHHHHH-
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc----c---CCCeEEEeCccCCCH----HHHHHH-
Confidence            356889999999999999999999998 999999999876543321    1   346788889988 43    222332 


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                        +.  ++|++||+||......      ..++.++.+++|+.++.++++++..    .+ +++|++||.+
T Consensus        89 --~~--~~d~Vih~A~~~~~~~------~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~v~~SS~~  143 (372)
T 3slg_A           89 --VK--KCDVILPLVAIATPAT------YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSE  143 (372)
T ss_dssp             --HH--HCSEEEECBCCCCHHH------HHHCHHHHHHHHTTTTHHHHHHHHH----HT-CEEEEECCGG
T ss_pred             --hc--cCCEEEEcCccccHHH------HhhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEeCcHH
Confidence              22  4899999999764321      2345667899999999988888643    34 7999999964

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.54  E-value=8.8e-15  Score=122.21  Aligned_cols=124  Identities=11%  Similarity=0.108  Sum_probs=91.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++++++++||||+|+||++++++|+++| ++|++++|+.++..+   .+.   ...++.++.+|++++       +.+.+
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~---~~~~v~~~~~Dl~d~-------~~l~~   95 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP---DHPAVRFSETSITDD-------ALLAS   95 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC---CCTTEEEECSCTTCH-------HHHHH
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc---CCCceEEEECCCCCH-------HHHHH
Confidence            4568899999999999999999999999 999999998653211   110   134577778888765       23333


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEeccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGSGAA  208 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS~ag  208 (210)
                      .+.  ++|++|||||....      +.+.+++++.+++|+.++.++++++    .+. +.+++|++||.+.
T Consensus        96 ~~~--~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~V~~SS~~v  154 (377)
T 2q1s_A           96 LQD--EYDYVFHLATYHGN------QSSIHDPLADHENNTLTTLKLYERL----KHFKRLKKVVYSAAGCS  154 (377)
T ss_dssp             CCS--CCSEEEECCCCSCH------HHHHHCHHHHHHHHTHHHHHHHHHH----TTCSSCCEEEEEEEC--
T ss_pred             Hhh--CCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCCHHH
Confidence            344  58999999996532      1234567889999999999999886    334 5579999999753

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.54  E-value=2e-14  Score=118.38  Aligned_cols=120  Identities=11%  Similarity=0.168  Sum_probs=88.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecChhH-HHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           64 SWALITGATDGIGKAFAHQLAQH--GLNLILVSRNHNK-LEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~--G~~Vi~~~r~~~~-l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++++||||+|+||++++++|+++  |++|++++|+... ..+   .+... ...++.++.+|+++.       +.+.+.+
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~---~~~~~-~~~~~~~~~~Dl~d~-------~~~~~~~   73 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKA---NLEAI-LGDRVELVVGDIADA-------ELVDKLA   73 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG---GTGGG-CSSSEEEEECCTTCH-------HHHHHHH
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChh---HHhhh-ccCCeEEEECCCCCH-------HHHHHHh
Confidence            68999999999999999999999  8999999996421 111   11111 134677888888765       2334444


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      .  .+|++|||||....      +.+.+++++.+++|+.|+.++++++.+.    + +++|++||.+
T Consensus        74 ~--~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~  127 (348)
T 1oc2_A           74 A--KADAIVHYAAESHN------DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDE  127 (348)
T ss_dssp             T--TCSEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGG
T ss_pred             h--cCCEEEECCcccCc------cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccc
Confidence            4  36999999997532      2234567789999999999999998764    3 4999999975

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.54  E-value=1.3e-14  Score=115.51  Aligned_cols=110  Identities=20%  Similarity=0.225  Sum_probs=83.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+|+||++++++|+ +|++|++++|+++. +          ++     +.+|+++.    +.++++.+..   +
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~----------~~-----~~~Dl~~~----~~~~~~~~~~---~   57 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q----------GG-----YKLDLTDF----PRLEDFIIKK---R   57 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T----------TC-----EECCTTSH----HHHHHHHHHH---C
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C----------CC-----ceeccCCH----HHHHHHHHhc---C
Confidence            58999999999999999999 58999999998642 0          12     66787765    3333333332   4


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +|++|||||....      +.+.+++++.+++|+.++.++++++.+    .+ +++|++||.+++
T Consensus        58 ~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~  111 (273)
T 2ggs_A           58 PDVIINAAAMTDV------DKCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVF  111 (273)
T ss_dssp             CSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGS
T ss_pred             CCEEEECCcccCh------hhhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeE
Confidence            8999999997532      224567889999999999999999754    33 599999998753

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.54  E-value=2.9e-14  Score=117.10  Aligned_cols=119  Identities=15%  Similarity=0.230  Sum_probs=88.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      ++++||||+|+||++++++|+++ |++|++++|+.++.++.       ....++.++.+|++++.   +.++++   +. 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~D~~~~~---~~~~~~---~~-   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LNHPHFHFVEGDISIHS---EWIEYH---VK-   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG-------TTCTTEEEEECCTTTCS---HHHHHH---HH-
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh-------hcCCCeEEEeccccCcH---HHHHhh---cc-
Confidence            36999999999999999999998 89999999987654321       11346778889998742   222222   22 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       ++|++|||||...+..      ..+++++.+++|+.++.++.+++.+    .+ +++|++||.+.
T Consensus        67 -~~d~vih~A~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v  120 (345)
T 2bll_A           67 -KCDVVLPLVAIATPIE------YTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEV  120 (345)
T ss_dssp             -HCSEEEECBCCCCHHH------HHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGG
T ss_pred             -CCCEEEEcccccCccc------hhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHH
Confidence             4789999999754311      2345677999999999998888643    44 79999999754

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.53  E-value=3.9e-14  Score=122.06  Aligned_cols=129  Identities=15%  Similarity=0.222  Sum_probs=93.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHc---CCeEEEEecChhHHHHHHHHHHhhCC--------------CceeEEEEEe
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQH---GLNLILVSRNHNKLEKISNEIQAENP--------------NTQINIVEYD  122 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~---G~~Vi~~~r~~~~l~~~~~~l~~~~~--------------~~~~~~~~~D  122 (210)
                      ...+++|+||||+|+||.+++++|+++   |++|++++|+++..+. .+.+.+...              ..++.++.+|
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA-RRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHH-HHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHH-HHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            346899999999999999999999999   9999999998765322 222322211              2578899999


Q ss_pred             cccCcc--chhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEE
Q 045749          123 FSCDVV--SAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAI  200 (210)
Q Consensus       123 ~~~~~~--~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~i  200 (210)
                      ++++..  ..+.++++   +.  ++|++|||||....          +.+++.+++|+.|+.++++++.    +.+.+++
T Consensus       149 l~~~~~gld~~~~~~~---~~--~~D~Vih~Aa~~~~----------~~~~~~~~~Nv~gt~~ll~aa~----~~~~~~~  209 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRL---AE--TVDLIVDSAAMVNA----------FPYHELFGPNVAGTAELIRIAL----TTKLKPF  209 (478)
T ss_dssp             TTSGGGGCCHHHHHHH---HH--HCCEEEECCSSCSB----------SSCCEEHHHHHHHHHHHHHHHT----SSSCCCE
T ss_pred             CCCcccCCCHHHHHHH---Hc--CCCEEEECccccCC----------cCHHHHHHHHHHHHHHHHHHHH----hCCCCeE
Confidence            987632  23333333   33  48999999997543          1233578999999999988864    3455689


Q ss_pred             EEeccccc
Q 045749          201 VNIGSGAA  208 (210)
Q Consensus       201 v~isS~ag  208 (210)
                      |++||.+.
T Consensus       210 V~iSS~~v  217 (478)
T 4dqv_A          210 TYVSTADV  217 (478)
T ss_dssp             EEEEEGGG
T ss_pred             EEEeehhh
Confidence            99999643

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.53  E-value=1.8e-14  Score=117.06  Aligned_cols=117  Identities=15%  Similarity=0.157  Sum_probs=85.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+|+||++++++|+++|++|++++|......+   .+     ...+.++.+|++++.    .++++.+..   +
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~-----~~~~~~~~~Dl~~~~----~~~~~~~~~---~   66 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV-----PKGVPFFRVDLRDKE----GVERAFREF---R   66 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS-----CTTCCEECCCTTCHH----HHHHHHHHH---C
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc-----ccCeEEEECCCCCHH----HHHHHHHhc---C
Confidence            58999999999999999999999999999985432110   01     124556778887653    233333322   4


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      +|++|||||....      +.+.+++++.+++|+.|+.++++++.    +.+.+++|++||.
T Consensus        67 ~d~vi~~a~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~  118 (311)
T 2p5y_A           67 PTHVSHQAAQASV------KVSVEDPVLDFEVNLLGGLNLLEACR----QYGVEKLVFASTG  118 (311)
T ss_dssp             CSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEH
T ss_pred             CCEEEECccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCC
Confidence            8999999996432      12456678899999999999999864    3456799999997

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.53  E-value=2.1e-14  Score=117.76  Aligned_cols=121  Identities=15%  Similarity=0.232  Sum_probs=88.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc---C---CeEEEEecChhH--HHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQH---G---LNLILVSRNHNK--LEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~---G---~~Vi~~~r~~~~--l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      +++||||+|+||++++++|+++   |   ++|++++|+...  .+.    +.......++.++.+|+++.    +   .+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~----~---~~   70 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN----LAPVDADPRLRFVHGDIRDA----G---LL   70 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGG----GGGGTTCTTEEEEECCTTCH----H---HH
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhh----hhhcccCCCeEEEEcCCCCH----H---HH
Confidence            5899999999999999999997   8   899999986421  111    11111134677888888765    2   23


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .+.+.  ++|++|||||....      +.+.+++++.+++|+.++.++++++.+.    +.++||++||.+.
T Consensus        71 ~~~~~--~~d~Vih~A~~~~~------~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~v  130 (337)
T 1r6d_A           71 ARELR--GVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQV  130 (337)
T ss_dssp             HHHTT--TCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGG
T ss_pred             HHHhc--CCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHH
Confidence            33333  68999999996532      1234566789999999999999998663    4579999999753

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.51  E-value=1.6e-14  Score=116.28  Aligned_cols=106  Identities=20%  Similarity=0.207  Sum_probs=81.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ..++++||||+|+||++++++|+++|++|++++|++                       +|+++.    +.++++.+.. 
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-----------------------~Dl~d~----~~~~~~~~~~-   62 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNV----LAVNKFFNEK-   62 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCH----HHHHHHHHHH-
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc-----------------------CCCCCH----HHHHHHHHhc-
Confidence            368999999999999999999999999999999961                       466554    3333333322 


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                        ++|++|||||....      +.+.+++++.+++|+.++.++++++.+    .+ .++|++||.+.
T Consensus        63 --~~d~vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~-~~iv~~SS~~v  116 (292)
T 1vl0_A           63 --KPNVVINCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYS----VG-AEIVQISTDYV  116 (292)
T ss_dssp             --CCSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGG
T ss_pred             --CCCEEEECCccCCH------HHHhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEechHHe
Confidence              48999999996432      224567788999999999999999765    23 39999999754

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.51  E-value=1.5e-14  Score=117.36  Aligned_cols=118  Identities=15%  Similarity=0.048  Sum_probs=87.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQH--GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~--G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++++||||+|+||.+++++|+++  |++|++++|+..+.+     +..     ++.++.+|+++.    +.++++.+..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~-----~~~~~~~D~~d~----~~~~~~~~~~   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN-----SGPFEVVNALDF----NQIEHLVEVH   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH-----SSCEEECCTTCH----HHHHHHHHHT
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC-----CCceEEecCCCH----HHHHHHHhhc
Confidence            578999999999999999999999  899999999865521     111     245677888765    3333333322


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                         ++|++||+||.....       ..+++++.+++|+.++.++.+++.+    .+.+++|++||.+.
T Consensus        68 ---~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~  121 (312)
T 2yy7_A           68 ---KITDIYLMAALLSAT-------AEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAV  121 (312)
T ss_dssp             ---TCCEEEECCCCCHHH-------HHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGG
T ss_pred             ---CCCEEEECCccCCCc-------hhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHH
Confidence               489999999964221       2355678999999999999988643    45579999999764

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.49  E-value=1.2e-14  Score=117.44  Aligned_cols=110  Identities=15%  Similarity=0.157  Sum_probs=81.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.||+++||||++|+|+++++.|+++|++|++++|+.++++++.+++....   .+.+..+|++++       +.+.+.
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~---~~~~~~~D~~~~-------~~~~~~  185 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADD-------ASRAEA  185 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSH-------HHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEecCCCH-------HHHHHH
Confidence            3568999999999999999999999999999999999999888888775531   245567788765       233333


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCH-HHHHHHhHhhhhHHH
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDE-KEWMDIVRVNLEGTT  182 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~-~~~~~~~~vN~~g~~  182 (210)
                      +.  ++|++|||||..... .+..+.+. ++++.++++|+.+++
T Consensus       186 ~~--~~DvlVn~ag~g~~~-~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          186 VK--GAHFVFTAGAIGLEL-LPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             TT--TCSEEEECCCTTCCS-BCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             HH--hCCEEEECCCccccC-CChhHcCchHHHHHHHHhhhhhhH
Confidence            44  479999999864321 11223333 556678999998877

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.48  E-value=1.7e-13  Score=111.26  Aligned_cols=111  Identities=14%  Similarity=0.142  Sum_probs=83.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +++++||||+|.||.+++++|+++|++|++++|++...+     +.      ++.++.+|++ .       +.+.+.+. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~------~~~~~~~Dl~-~-------~~~~~~~~-   61 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----IN------DYEYRVSDYT-L-------EDLINQLN-   61 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-H-------HHHHHHTT-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----CC------ceEEEEcccc-H-------HHHHHhhc-
Confidence            478999999999999999999999999999999843322     11      4667777776 4       23444444 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       ++|++||+||.....          +.++.+++|+.++.++.+++.    +.+.+++|++||.+.
T Consensus        62 -~~d~Vih~a~~~~~~----------~~~~~~~~n~~~~~~ll~a~~----~~~~~r~v~~SS~~v  112 (311)
T 3m2p_A           62 -DVDAVVHLAATRGSQ----------GKISEFHDNEILTQNLYDACY----ENNISNIVYASTISA  112 (311)
T ss_dssp             -TCSEEEECCCCCCSS----------SCGGGTHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGG
T ss_pred             -CCCEEEEccccCCCC----------ChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEccHHH
Confidence             589999999975432          234578999999988888864    455679999999654

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.48  E-value=3.9e-14  Score=115.17  Aligned_cols=114  Identities=20%  Similarity=0.239  Sum_probs=85.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc--CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           65 WALITGATDGIGKAFAHQLAQH--GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~--G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +++||||+|+||++++++|+++  |++|++++|+..+.+             .+.++.+|+++.    +.++++.+..  
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~D~~d~----~~~~~~~~~~--   61 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------------GIKFITLDVSNR----DEIDRAVEKY--   61 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------------TCCEEECCTTCH----HHHHHHHHHT--
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------------CceEEEecCCCH----HHHHHHHhhc--
Confidence            3899999999999999999998  899999998754321             245677888765    2233333322  


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|++|||||....       .+.+++++.+++|+.++.++++++.+    .+.+++|++||.+.+
T Consensus        62 -~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~  116 (317)
T 3ajr_A           62 -SIDAIFHLAGILSA-------KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVF  116 (317)
T ss_dssp             -TCCEEEECCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGC
T ss_pred             -CCcEEEECCcccCC-------ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHh
Confidence             58999999996421       12355678999999999999998653    456799999998653

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.46  E-value=1.2e-13  Score=114.33  Aligned_cols=122  Identities=13%  Similarity=0.150  Sum_probs=83.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ..+++++||||+|+||++++++|+++| ++|++++|+.....  .+.+    ++..   +.+|++++    +.++.+.+.
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~----~~~~---~~~d~~~~----~~~~~~~~~  110 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL----VDLN---IADYMDKE----DFLIQIMAG  110 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT----TTSC---CSEEEEHH----HHHHHHHTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc----cCce---EeeecCcH----HHHHHHHhh
Confidence            457899999999999999999999999 99999999865421  0011    1111   45666654    323333221


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ....++|++|||||....        +.+++++.+++|+.++.++++++.+    .+. ++|++||.+.
T Consensus       111 ~~~~~~d~Vih~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v  166 (357)
T 2x6t_A          111 EEFGDVEAIFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAAT  166 (357)
T ss_dssp             CCCSSCCEEEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGG
T ss_pred             cccCCCCEEEECCcccCC--------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHH
Confidence            101159999999997532        2234677999999999999999865    344 8999999864

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.46  E-value=9.2e-14  Score=114.39  Aligned_cols=120  Identities=13%  Similarity=0.116  Sum_probs=85.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ..+++++||||+|+||++++++|+++|++|++++|+.....+.   +.......++.++.+|+.+..            +
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~------------~   89 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---VEHWIGHENFELINHDVVEPL------------Y   89 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---TGGGTTCTTEEEEECCTTSCC------------C
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhh---hhhhccCCceEEEeCccCChh------------h
Confidence            4578999999999999999999999999999999975322111   111111345777888887652            2


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .  ++|++|||||......      ..+++++.+++|+.++.++++++.+    .+ .++|++||.+.
T Consensus        90 ~--~~d~vih~A~~~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v  144 (343)
T 2b69_A           90 I--EVDQIYHLASPASPPN------YMYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEV  144 (343)
T ss_dssp             C--CCSEEEECCSCCSHHH------HTTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGG
T ss_pred             c--CCCEEEECccccCchh------hhhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEECcHHH
Confidence            2  5899999999754211      1123467899999999999998754    23 49999999754

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.45  E-value=2.4e-13  Score=121.43  Aligned_cols=122  Identities=15%  Similarity=0.224  Sum_probs=90.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ..+++++||||+|+||.+++++|+++ |++|++++|+.++.++.       ....++.++.+|++++.   +.++++   
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~-------~~~~~v~~v~~Dl~d~~---~~~~~~---  379 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LNHPHFHFVEGDISIHS---EWIEYH---  379 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG-------TTCTTEEEEECCTTTCH---HHHHHH---
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh-------ccCCceEEEECCCCCcH---HHHHHh---
Confidence            35789999999999999999999998 89999999987654321       11346778888988762   112222   


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +.  ++|++|||||......      ..+++++.+++|+.|+.++.+++.+    .+ +++|++||.+.
T Consensus       380 ~~--~~D~Vih~Aa~~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~v  435 (660)
T 1z7e_A          380 VK--KCDVVLPLVAIATPIE------YTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEV  435 (660)
T ss_dssp             HH--HCSEEEECCCCCCTHH------HHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGG
T ss_pred             hc--CCCEEEECceecCccc------cccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHH
Confidence            22  4889999999754311      2345678999999999999888654    34 89999999754

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.40  E-value=6.5e-13  Score=106.51  Aligned_cols=103  Identities=19%  Similarity=0.223  Sum_probs=78.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+|+||++++++|+++|++|++++|.+                       +|+++.    +.++++.+..   +
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-----------------------~D~~d~----~~~~~~~~~~---~   56 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL-----------------------LDITNI----SQVQQVVQEI---R   56 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT-----------------------SCTTCH----HHHHHHHHHH---C
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc-----------------------cCCCCH----HHHHHHHHhc---C
Confidence            799999999999999999999999999999921                       455544    3333343333   4


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +|++||+||.....      .+.+++++.+++|+.++.++.+++.+.    + .++|++||.+.
T Consensus        57 ~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~SS~~v  109 (287)
T 3sc6_A           57 PHIIIHCAAYTKVD------QAEKERDLAYVINAIGARNVAVASQLV----G-AKLVYISTDYV  109 (287)
T ss_dssp             CSEEEECCCCCCHH------HHTTCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGG
T ss_pred             CCEEEECCcccChH------HHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchhhh
Confidence            89999999976431      122456789999999999999997542    3 48999999754

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.40  E-value=8.3e-13  Score=105.81  Aligned_cols=108  Identities=20%  Similarity=0.233  Sum_probs=80.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           64 SWALITGATDGIGKAFAHQLAQH--GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~--G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      |+++||||+|+||++++++|+++  |++|++++|+.++.++..    .    ..+.++.+|+++.       +.+.+.+.
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~d~-------~~l~~~~~   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D----QGVEVRHGDYNQP-------ESLQKAFA   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H----TTCEEEECCTTCH-------HHHHHHTT
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h----cCCeEEEeccCCH-------HHHHHHHh
Confidence            46899999999999999999998  999999999877654332    1    2356778888765       23444444


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                        ++|++||+||..   .      . +      ++|+.++.++.+++    ++.+.+++|++||.++
T Consensus        66 --~~d~vi~~a~~~---~------~-~------~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~  110 (287)
T 2jl1_A           66 --GVSKLLFISGPH---Y------D-N------TLLIVQHANVVKAA----RDAGVKHIAYTGYAFA  110 (287)
T ss_dssp             --TCSEEEECCCCC---S------C-H------HHHHHHHHHHHHHH----HHTTCSEEEEEEETTG
T ss_pred             --cCCEEEEcCCCC---c------C-c------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCC
Confidence              489999999852   1      1 1      57888888887775    4456679999999764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.39  E-value=1.2e-12  Score=106.61  Aligned_cols=108  Identities=13%  Similarity=0.128  Sum_probs=80.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +++++||||+|+||.+++++|+++|++|++++|+.                      .+|+++.    +.++++.+..  
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~----~~~~~~~~~~--   54 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDS----RAVHDFFASE--   54 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCH----HHHHHHHHHH--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCH----HHHHHHHHhc--
Confidence            57899999999999999999999999999988762                      1456554    3333333332  


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       ++|++||+||.....     +...++.++.+++|+.++.++.+++.+    .+.+++|++||.+.
T Consensus        55 -~~d~vih~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~v  110 (321)
T 1e6u_A           55 -RIDQVYLAAAKVGGI-----VANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCI  110 (321)
T ss_dssp             -CCSEEEECCCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGG
T ss_pred             -CCCEEEEcCeecCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHH
Confidence             489999999965321     113445677899999999999988654    45579999999764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.38  E-value=3.6e-13  Score=108.15  Aligned_cols=110  Identities=16%  Similarity=0.135  Sum_probs=82.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +++++||| +|+||.+++++|+++|++|++++|+.+++            ...+.++.+|+++.....+.++       +
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~-------~   62 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVH-------L   62 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGG-------G
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhc-------C
Confidence            56899999 59999999999999999999999987642            2456778899988755444322       1


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       ++|++||+||..           .++.+..+++|+.++.++.+++    .+.+.+++|++||.+.
T Consensus        63 -~~d~vih~a~~~-----------~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~v~~SS~~v  112 (286)
T 3gpi_A           63 -RPEILVYCVAAS-----------EYSDEHYRLSYVEGLRNTLSAL----EGAPLQHVFFVSSTGV  112 (286)
T ss_dssp             -CCSEEEECHHHH-----------HHC-----CCSHHHHHHHHHHT----TTSCCCEEEEEEEGGG
T ss_pred             -CCCEEEEeCCCC-----------CCCHHHHHHHHHHHHHHHHHHH----hhCCCCEEEEEcccEE
Confidence             589999999852           1334568899999998888875    3456689999999754

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.38  E-value=2.2e-12  Score=111.77  Aligned_cols=122  Identities=17%  Similarity=0.185  Sum_probs=89.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH---HHHHHHHHHhhC-------CCceeEEEEEecccCccchhh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK---LEKISNEIQAEN-------PNTQINIVEYDFSCDVVSAGN  132 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~---l~~~~~~l~~~~-------~~~~~~~~~~D~~~~~~~~~~  132 (210)
                      .++++||||+|.||.+++++|.++|++|++++|+..+   .+++.+.++...       ...++.++.+|+++.....  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            5799999999999999999999999999999998763   333333332221       1357899999999865444  


Q ss_pred             HHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          133 IKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       133 ~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                            ...  ++|++|||||....         .++++..+++|+.|+.++++++.+     +..++|++||.+.
T Consensus       228 ------~~~--~~D~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~v  281 (508)
T 4f6l_B          228 ------LPE--NMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV  281 (508)
T ss_dssp             ------CSS--CCSEEEECCCC-----------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCT
T ss_pred             ------Ccc--CCCEEEECCceecC---------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhh
Confidence                  222  69999999996531         234567889999999999998654     4579999999764

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.37  E-value=1.9e-12  Score=104.61  Aligned_cols=118  Identities=13%  Similarity=0.150  Sum_probs=81.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      +++||||+|+||++++++|+++| ++|++++|+.....  .+.+.    +..   +.+|++++    +.++.+.+.....
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~---~~~d~~~~----~~~~~~~~~~~~~   67 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN---IADYMDKE----DFLIQIMAGEEFG   67 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----TSC---CSEEEEHH----HHHHHHHTTCCCS
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----cce---eccccccH----HHHHHHHhccccC
Confidence            37999999999999999999999 89999999865421  11121    111   44676654    2233332211001


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++|++|||||....        +.+++++.+++|+.++.++++++.+    .+. ++|++||.+.
T Consensus        68 ~~d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v  119 (310)
T 1eq2_A           68 DVEAIFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAAT  119 (310)
T ss_dssp             SCCEEEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGG
T ss_pred             CCcEEEECcccccC--------cccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHH
Confidence            58999999996532        2234567899999999999998754    345 8999999754

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.35  E-value=3.7e-13  Score=108.50  Aligned_cols=106  Identities=20%  Similarity=0.131  Sum_probs=77.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+|+||++++++|+ +|++|++++|+..                   .+.+|+++.    +.++++.+..   +
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~----~~~~~~~~~~---~   54 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNP----KGVAETVRKL---R   54 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCH----HHHHHHHHHH---C
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCH----HHHHHHHHhc---C
Confidence            58999999999999999999 8999999999751                   123566554    3333333322   4


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +|++||+||.....      .+.+++++.+++|+.++.++.+++.    +.+ .++|++||.+.
T Consensus        55 ~d~vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~----~~~-~~~v~~SS~~v  107 (299)
T 1n2s_A           55 PDVIVNAAAHTAVD------KAESEPELAQLLNATSVEAIAKAAN----ETG-AWVVHYSTDYV  107 (299)
T ss_dssp             CSEEEECCCCCCHH------HHTTCHHHHHHHHTHHHHHHHHHHT----TTT-CEEEEEEEGGG
T ss_pred             CCEEEECcccCCHh------hhhcCHHHHHHHHHHHHHHHHHHHH----HcC-CcEEEEecccE
Confidence            89999999965321      1224456789999999999998863    233 48999999754

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.35  E-value=4.4e-13  Score=108.33  Aligned_cols=114  Identities=15%  Similarity=0.065  Sum_probs=76.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+++++++||||+|+||++++++|+++|+      +...             ....+..+.+|+++.    +.++++.+.
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-------------~~~~~~~~~~D~~d~----~~~~~~~~~   59 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-------------DWVFVSSKDADLTDT----AQTRALFEK   59 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-------------EEEECCTTTCCTTSH----HHHHHHHHH
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-------------cccccCceecccCCH----HHHHHHHhh
Confidence            45688999999999999999999999997      1100             011122223565544    333333332


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                         .++|++||+||.....     ..+.++.++.+++|+.|+.++.+++.    +.+.+++|++||.+.
T Consensus        60 ---~~~d~Vih~A~~~~~~-----~~~~~~~~~~~~~nv~gt~~ll~a~~----~~~~~~~v~~SS~~v  116 (319)
T 4b8w_A           60 ---VQPTHVIHLAAMVGGL-----FRNIKYNLDFWRKNVHMNDNVLHSAF----EVGARKVVSCLSTCI  116 (319)
T ss_dssp             ---SCCSEEEECCCCCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHHH----HTTCSEEEEECCGGG
T ss_pred             ---cCCCEEEECceecccc-----cccccCHHHHHHHHHHHHHHHHHHHH----HcCCCeEEEEcchhh
Confidence               2589999999974321     11223455789999999999988864    445679999999854

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.34  E-value=2.1e-12  Score=106.73  Aligned_cols=116  Identities=22%  Similarity=0.158  Sum_probs=84.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC-----CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHG-----LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G-----~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      +++++||||+|+||.+++++|+++|     ++|++++|+.....         ....++.++.+|+++.    +   .+.
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~----~---~~~   64 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDP----D---DSQ   64 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSH----H---HHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCH----H---HHH
Confidence            4689999999999999999999999     99999999865432         0134577788888765    2   233


Q ss_pred             HHhcCCC-ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEE-------Eecccc
Q 045749          138 MAIDGLE-VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIV-------NIGSGA  207 (210)
Q Consensus       138 ~~~~~~~-id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv-------~isS~a  207 (210)
                      +.+.+.+ +|++||+||...           ++.++.+++|+.++.++++++.+..  .+..++|       ++||.+
T Consensus        65 ~~~~~~~~~d~vih~a~~~~-----------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~  129 (364)
T 2v6g_A           65 AKLSPLTDVTHVFYVTWANR-----------STEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFE  129 (364)
T ss_dssp             HHHTTCTTCCEEEECCCCCC-----------SSHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGG
T ss_pred             HHHhcCCCCCEEEECCCCCc-----------chHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechh
Confidence            3343323 899999999642           1245689999999999999875431  1345776       688764

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.34  E-value=4e-14  Score=115.01  Aligned_cols=117  Identities=15%  Similarity=0.082  Sum_probs=73.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ++++++||||+|+||.+++++|+++|++|++++|+.......         ......    +.....    ++.+...+.
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~----~~~~~~----~~~~~~Dl~   68 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIP---------PEGTGK----FLEKPV----LELEERDLS   68 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSC---------CTTSSE----EECSCG----GGCCHHHHT
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccc---------hhhhhh----hccCCC----eeEEeCccc
Confidence            478999999999999999999999999999999986521000         000000    000000    011111121


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                        ++|++||+||......  . .   ++.+..++ |+.++.++.+++..    .+.+++|++||.+.
T Consensus        69 --~~d~vi~~a~~~~~~~--~-~---~~~~~~~~-n~~~~~~ll~a~~~----~~v~~~v~~SS~~v  122 (321)
T 3vps_A           69 --DVRLVYHLASHKSVPR--S-F---KQPLDYLD-NVDSGRHLLALCTS----VGVPKVVVGSTCEV  122 (321)
T ss_dssp             --TEEEEEECCCCCCHHH--H-T---TSTTTTHH-HHHHHHHHHHHHHH----HTCCEEEEEEEGGG
T ss_pred             --cCCEEEECCccCChHH--H-H---hCHHHHHH-HHHHHHHHHHHHHH----cCCCeEEEecCHHH
Confidence              5899999999764311  0 1   11123456 99999988888644    34579999999754

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.34  E-value=5.3e-12  Score=101.32  Aligned_cols=106  Identities=16%  Similarity=0.181  Sum_probs=77.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           65 WALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      +++||||+|+||++++++|.++ |++|++++|+.++.++.    .    ...+.++.+|+++.       +.+.+.+.  
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~----~~~v~~~~~D~~d~-------~~l~~~~~--   64 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----W----RGKVSVRQLDYFNQ-------ESMVEAFK--   64 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----G----BTTBEEEECCTTCH-------HHHHHHTT--
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----h----hCCCEEEEcCCCCH-------HHHHHHHh--
Confidence            4899999999999999999998 99999999998764322    1    34577888898766       33444454  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      .+|++|||||.....                ..|+.++    +.+++.+++.+.++||++||..
T Consensus        65 ~~d~vi~~a~~~~~~----------------~~~~~~~----~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           65 GMDTVVFIPSIIHPS----------------FKRIPEV----ENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             TCSEEEECCCCCCSH----------------HHHHHHH----HHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCCEEEEeCCCCccc----------------hhhHHHH----HHHHHHHHHcCCCEEEEEcccC
Confidence            589999999864321                1144443    4555656777778999999964

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.30  E-value=5.6e-12  Score=109.55  Aligned_cols=111  Identities=17%  Similarity=0.133  Sum_probs=81.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +++++||||+|.||.+++++|+++|++|++++|+..+.+                .+.+|+.+.  .       .+.+. 
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~----------------~v~~d~~~~--~-------~~~l~-  200 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG----------------KRFWDPLNP--A-------SDLLD-  200 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT----------------CEECCTTSC--C-------TTTTT-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc----------------ceeecccch--h-------HHhcC-
Confidence            678999999999999999999999999999999865421                134565432  1       11222 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       ++|++||+||.....     +.+.+..+..+++|+.|+.++++++.   .+.+.+++|++||.+.
T Consensus       201 -~~D~Vih~A~~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~v  257 (516)
T 3oh8_A          201 -GADVLVHLAGEPIFG-----RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGF  257 (516)
T ss_dssp             -TCSEEEECCCC----------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGG
T ss_pred             -CCCEEEECCCCcccc-----ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceE
Confidence             589999999975331     34556678899999999999999743   3445679999999753

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.29  E-value=6e-12  Score=100.62  Aligned_cols=105  Identities=20%  Similarity=0.192  Sum_probs=72.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc--CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           65 WALITGATDGIGKAFAHQLAQH--GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~--G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +++||||+|+||++++++|+++  |++|++++|++++.++..    .    ..+.++.+|++++       +.+.+.+. 
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~-------~~~~~~~~-   64 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A----QGITVRQADYGDE-------AALTSALQ-   64 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H----TTCEEEECCTTCH-------HHHHHHTT-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c----CCCeEEEcCCCCH-------HHHHHHHh-
Confidence            3799999999999999999998  999999999977654322    1    2356778888765       23444444 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       .+|++||+||..   +    +           .|+.++.++.++    +++.+.+++|++||.++
T Consensus        65 -~~d~vi~~a~~~---~----~-----------~~~~~~~~l~~a----~~~~~~~~~v~~Ss~~~  107 (286)
T 2zcu_A           65 -GVEKLLLISSSE---V----G-----------QRAPQHRNVINA----AKAAGVKFIAYTSLLHA  107 (286)
T ss_dssp             -TCSEEEECC--------------------------CHHHHHHHH----HHHHTCCEEEEEEETTT
T ss_pred             -CCCEEEEeCCCC---c----h-----------HHHHHHHHHHHH----HHHcCCCEEEEECCCCC
Confidence             479999999842   1    0           255555555544    55556689999999764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.28  E-value=2.2e-11  Score=98.28  Aligned_cols=111  Identities=17%  Similarity=0.166  Sum_probs=76.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|+++||||+|+||++++++|+++| ++|++++|++++...  +++..    ..+.++.+|+++.       +.+.+.+.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~----~~~~~~~~D~~d~-------~~l~~~~~   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL----QGAEVVQGDQDDQ-------VIMELALN   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH----TTCEEEECCTTCH-------HHHHHHHT
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH----CCCEEEEecCCCH-------HHHHHHHh
Confidence            5789999999999999999999999 999999999765421  22322    2356778888765       23444444


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                        .+|++|||||....       ..       .+.|+.    .++.+++.+++.+.++||++||.
T Consensus        72 --~~d~vi~~a~~~~~-------~~-------~~~~~~----~~~~~~~aa~~~gv~~iv~~S~~  116 (299)
T 2wm3_A           72 --GAYATFIVTNYWES-------CS-------QEQEVK----QGKLLADLARRLGLHYVVYSGLE  116 (299)
T ss_dssp             --TCSEEEECCCHHHH-------TC-------HHHHHH----HHHHHHHHHHHHTCSEEEECCCC
T ss_pred             --cCCEEEEeCCCCcc-------cc-------chHHHH----HHHHHHHHHHHcCCCEEEEEcCc
Confidence              48999999984211       01       223433    44555566666777899996664

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.25  E-value=8.4e-11  Score=97.41  Aligned_cols=109  Identities=13%  Similarity=0.068  Sum_probs=76.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEe-cccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD-FSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~~  141 (210)
                      +++++||||+++||++++++|+++|++|++++|+.++..  .+++..   ...+..+.+| +++.       +.+.+.+.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~~~v~~v~~D~l~d~-------~~l~~~~~   72 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNV-------PLMDTLFE   72 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCH-------HHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---cCCcEEEECCccCCH-------HHHHHHHh
Confidence            678999999999999999999999999999999876542  123322   2346777888 7765       23334444


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGA  207 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~a  207 (210)
                        .+|++|+|++....                 +.|..+     +.+++.+++.+ .+++|++||.+
T Consensus        73 --~~d~Vi~~a~~~~~-----------------~~~~~~-----~~l~~aa~~~g~v~~~V~~SS~~  115 (352)
T 1xgk_A           73 --GAHLAFINTTSQAG-----------------DEIAIG-----KDLADAAKRAGTIQHYIYSSMPD  115 (352)
T ss_dssp             --TCSEEEECCCSTTS-----------------CHHHHH-----HHHHHHHHHHSCCSEEEEEECCC
T ss_pred             --cCCEEEEcCCCCCc-----------------HHHHHH-----HHHHHHHHHcCCccEEEEeCCcc
Confidence              47899999874310                 124333     44555556666 68999999975

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.22  E-value=7e-11  Score=95.38  Aligned_cols=79  Identities=24%  Similarity=0.298  Sum_probs=59.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh-------hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH-------NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~-------~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      +++++||||+|+||++++++|+++|++|++++|+.       ++.+.. +++..    ..+.++.+|+++.       +.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~----~~v~~v~~D~~d~-------~~   69 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS----LGVILLEGDINDH-------ET   69 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH----TTCEEEECCTTCH-------HH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh----CCCEEEEeCCCCH-------HH
Confidence            46799999999999999999999999999999986       444432 23332    2466788888765       23


Q ss_pred             HHHHhcCCCccEEEEcCCCC
Q 045749          136 IEMAIDGLEVGVLINNVGIT  155 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~  155 (210)
                      +.+.+.  .+|++|||||..
T Consensus        70 l~~~~~--~~d~vi~~a~~~   87 (307)
T 2gas_A           70 LVKAIK--QVDIVICAAGRL   87 (307)
T ss_dssp             HHHHHT--TCSEEEECSSSS
T ss_pred             HHHHHh--CCCEEEECCccc
Confidence            444444  489999999853

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.16  E-value=1.7e-10  Score=93.79  Aligned_cols=79  Identities=15%  Similarity=0.224  Sum_probs=57.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh-h----HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH-N----KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~-~----~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .++++||||+|++|++++++|+++|++|++++|+. .    ...+..+++..    ..+.++.+|+++.       +.+.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~----~~v~~v~~D~~d~-------~~l~   72 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS----MGVTIIEGEMEEH-------EKMV   72 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH----TTCEEEECCTTCH-------HHHH
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc----CCcEEEEecCCCH-------HHHH
Confidence            46799999999999999999999999999999986 1    12222222322    2467788888765       3344


Q ss_pred             HHhcCCCccEEEEcCCC
Q 045749          138 MAIDGLEVGVLINNVGI  154 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~  154 (210)
                      +.+.  .+|++|||||.
T Consensus        73 ~a~~--~~d~vi~~a~~   87 (321)
T 3c1o_A           73 SVLK--QVDIVISALPF   87 (321)
T ss_dssp             HHHT--TCSEEEECCCG
T ss_pred             HHHc--CCCEEEECCCc
Confidence            4454  48999999985

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.15  E-value=3.7e-10  Score=91.37  Aligned_cols=105  Identities=16%  Similarity=0.192  Sum_probs=72.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh-----hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH-----NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~-----~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .++++||||+|++|++++++|+++|++|++++|+.     ++.+.+ +++.    ...+.++.+|+++.       +.+.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~----~~~~~~~~~D~~d~-------~~l~   71 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK----QLGAKLIEASLDDH-------QRLV   71 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH----TTTCEEECCCSSCH-------HHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH----hCCeEEEeCCCCCH-------HHHH
Confidence            46799999999999999999999999999999984     333222 2222    23466778888765       2344


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEE
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVN  202 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~  202 (210)
                      +.+.  .+|++||+||.....                 .|+.++..+.++    +++.+ .+++|+
T Consensus        72 ~~~~--~~d~vi~~a~~~~~~-----------------~~~~~~~~l~~a----a~~~g~v~~~v~  114 (313)
T 1qyd_A           72 DALK--QVDVVISALAGGVLS-----------------HHILEQLKLVEA----IKEAGNIKRFLP  114 (313)
T ss_dssp             HHHT--TCSEEEECCCCSSSS-----------------TTTTTHHHHHHH----HHHSCCCSEEEC
T ss_pred             HHHh--CCCEEEECCccccch-----------------hhHHHHHHHHHH----HHhcCCCceEEe
Confidence            4444  489999999864321                 155555555544    45565 678884

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.14  E-value=6.7e-11  Score=91.75  Aligned_cols=81  Identities=21%  Similarity=0.239  Sum_probs=59.7

Q ss_pred             cCCcEEEEEcC----------------CChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecc
Q 045749           61 SYGSWALITGA----------------TDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS  124 (210)
Q Consensus        61 ~~gk~vlITGa----------------ssGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~  124 (210)
                      +.||+++||||                |+|||+++|+.++++|++|++++++.. ++         .+. ..  -.+|++
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~~-g~--~~~dv~   72 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TPP-FV--KRVDVM   72 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CCT-TE--EEEECC
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cCC-CC--eEEccC
Confidence            56999999999                689999999999999999999988652 11         011 11  134554


Q ss_pred             cCccchhhHHHHHHHhcCCCccEEEEcCCCCCCCc
Q 045749          125 CDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKA  159 (210)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~  159 (210)
                      +   ..+..+.+.+.++  ++|++|||||+....+
T Consensus        73 ~---~~~~~~~v~~~~~--~~Dili~~Aav~d~~p  102 (226)
T 1u7z_A           73 T---ALEMEAAVNASVQ--QQNIFIGCAAVADYRA  102 (226)
T ss_dssp             S---HHHHHHHHHHHGG--GCSEEEECCBCCSEEE
T ss_pred             c---HHHHHHHHHHhcC--CCCEEEECCcccCCCC
Confidence            3   4555667777777  6999999999876443

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.13  E-value=1.5e-10  Score=94.03  Aligned_cols=79  Identities=20%  Similarity=0.244  Sum_probs=58.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .++++||||+|++|++++++|+++|++|++++|+.+...+..+++..    ..+.++.+|+++.       +.+.+.+. 
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~----~~v~~v~~Dl~d~-------~~l~~a~~-   78 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS----LGAIIVKGELDEH-------EKLVELMK-   78 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH----TTCEEEECCTTCH-------HHHHHHHT-
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc----CCCEEEEecCCCH-------HHHHHHHc-
Confidence            35799999999999999999999999999999987522222223332    2366788888765       23444444 


Q ss_pred             CCccEEEEcCCC
Q 045749          143 LEVGVLINNVGI  154 (210)
Q Consensus       143 ~~id~lvnnAg~  154 (210)
                       .+|++|||||.
T Consensus        79 -~~d~vi~~a~~   89 (318)
T 2r6j_A           79 -KVDVVISALAF   89 (318)
T ss_dssp             -TCSEEEECCCG
T ss_pred             -CCCEEEECCch
Confidence             48999999985

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.13  E-value=1.5e-10  Score=95.31  Aligned_cols=103  Identities=17%  Similarity=0.145  Sum_probs=72.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh----hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH----NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~----~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .++++||||+|+||++++++|+++|++|++++|+.    ++.+. .+++.    ...+.++.+|+++.    +.+.++.+
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~~~l~----~~~v~~~~~Dl~d~----~~l~~~~~   80 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKI-FKALE----DKGAIIVYGLINEQ----EAMEKILK   80 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HHHHH----HTTCEEEECCTTCH----HHHHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHH-HHHHH----hCCcEEEEeecCCH----HHHHHHHh
Confidence            56899999999999999999999999999999986    33322 22332    23567888898865    32333333


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEE
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVN  202 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~  202 (210)
                      ..   ++|++||+||..                     |+.++.++++++.    +.+ ..++|.
T Consensus        81 ~~---~~d~Vi~~a~~~---------------------n~~~~~~l~~aa~----~~g~v~~~v~  117 (346)
T 3i6i_A           81 EH---EIDIVVSTVGGE---------------------SILDQIALVKAMK----AVGTIKRFLP  117 (346)
T ss_dssp             HT---TCCEEEECCCGG---------------------GGGGHHHHHHHHH----HHCCCSEEEC
T ss_pred             hC---CCCEEEECCchh---------------------hHHHHHHHHHHHH----HcCCceEEee
Confidence            22   489999999851                     7777777776653    344 567775

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.10  E-value=7.4e-10  Score=88.53  Aligned_cols=100  Identities=18%  Similarity=0.138  Sum_probs=72.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .++++|||| |.||.+++++|.++|++|++++|++++.+...+        ..+.++.+|+++..            .. 
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~------------~~-   62 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS------------LD-   62 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC------------CT-
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc------------cC-
Confidence            368999998 999999999999999999999999877654321        24677888887631            22 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh--CCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR--RKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~--~~~g~iv~isS~ag  208 (210)
                       ++|++||+||.....       +.                .++.++..+.+  .+.+++|++||.+.
T Consensus        63 -~~d~vi~~a~~~~~~-------~~----------------~~~~l~~a~~~~~~~~~~~v~~Ss~~v  106 (286)
T 3ius_A           63 -GVTHLLISTAPDSGG-------DP----------------VLAALGDQIAARAAQFRWVGYLSTTAV  106 (286)
T ss_dssp             -TCCEEEECCCCBTTB-------CH----------------HHHHHHHHHHHTGGGCSEEEEEEEGGG
T ss_pred             -CCCEEEECCCccccc-------cH----------------HHHHHHHHHHhhcCCceEEEEeeccee
Confidence             589999999965321       11                02344444555  45579999999753

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.08  E-value=2.5e-10  Score=92.13  Aligned_cols=79  Identities=25%  Similarity=0.327  Sum_probs=56.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHH-----HHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKL-----EKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l-----~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .++++||||+|++|++++++|+++|++|++++|+....     .+..+++.    ...+.++.+|+++.    +   .+.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~----~~~v~~v~~D~~d~----~---~l~   72 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK----ASGANIVHGSIDDH----A---SLV   72 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH----TTTCEEECCCTTCH----H---HHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH----hCCCEEEEeccCCH----H---HHH
Confidence            46799999999999999999999999999999984321     11112222    23467778888765    2   233


Q ss_pred             HHhcCCCccEEEEcCCC
Q 045749          138 MAIDGLEVGVLINNVGI  154 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~  154 (210)
                      +.+.  .+|++||+||.
T Consensus        73 ~~~~--~~d~vi~~a~~   87 (308)
T 1qyc_A           73 EAVK--NVDVVISTVGS   87 (308)
T ss_dssp             HHHH--TCSEEEECCCG
T ss_pred             HHHc--CCCEEEECCcc
Confidence            3343  48899999985

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.06  E-value=2.4e-10  Score=88.87  Aligned_cols=82  Identities=15%  Similarity=0.222  Sum_probs=60.5

Q ss_pred             CCcEEEEEcC----------------CChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEeccc
Q 045749           62 YGSWALITGA----------------TDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC  125 (210)
Q Consensus        62 ~gk~vlITGa----------------ssGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~  125 (210)
                      .||+++||||                ||++|.++|+.++++|++|++++|+... ..       .. ...     +|+.+
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~-------~~-~~~-----~~~~~   67 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP-------EP-HPN-----LSIRE   67 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC-------CC-CTT-----EEEEE
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc-------cC-CCC-----eEEEE
Confidence            4899999999                7779999999999999999999997531 10       00 112     23334


Q ss_pred             CccchhhHHHHHHHhcCCCccEEEEcCCCCCCCc
Q 045749          126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKA  159 (210)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~  159 (210)
                      ..+..+..+.+.+.++  ++|++|||||+....+
T Consensus        68 v~s~~em~~~v~~~~~--~~Dili~aAAvsD~~p   99 (232)
T 2gk4_A           68 ITNTKDLLIEMQERVQ--DYQVLIHSMAVSDYTP   99 (232)
T ss_dssp             CCSHHHHHHHHHHHGG--GCSEEEECSBCCSEEE
T ss_pred             HhHHHHHHHHHHHhcC--CCCEEEEcCccccccc
Confidence            4456666777887776  6899999999876544

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.03  E-value=2.5e-10  Score=94.79  Aligned_cols=95  Identities=20%  Similarity=0.221  Sum_probs=70.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      +++||||+|.||++++++|+++|+ +|+..+|+                           .+    .+.++++   +.  
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d----~~~l~~~---~~--   45 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TK----EEELESA---LL--   45 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CC----HHHHHHH---HH--
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CC----HHHHHHH---hc--
Confidence            589999999999999999999998 88888875                           11    1222222   22  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCC-EEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKG-AIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g-~iv~isS~ag~  209 (210)
                      ++|++||+||...+.          +.++.+++|+.++.++++++    ++.+.. ++|++||....
T Consensus        46 ~~d~Vih~a~~~~~~----------~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~   98 (369)
T 3st7_A           46 KADFIVHLAGVNRPE----------HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQAT   98 (369)
T ss_dssp             HCSEEEECCCSBCTT----------CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGG
T ss_pred             cCCEEEECCcCCCCC----------CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhc
Confidence            388999999975431          22346889999999888875    334434 99999998653

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.01  E-value=3.9e-09  Score=84.98  Aligned_cols=110  Identities=22%  Similarity=0.246  Sum_probs=75.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||+|-||.+++++|.++|++|+++.|++..              ..       +..+       +...+.+.  +
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~-------~~~~-------~~~~~~l~--~   51 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GR-------ITWD-------ELAASGLP--S   51 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TE-------EEHH-------HHHHHCCC--S
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Ce-------eecc-------hhhHhhcc--C
Confidence            48999999999999999999999999999997532              11       1111       01112233  5


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +|.+||.||......  ....+.+..+..++.|+.++-.+.+.+..  .+.+..++|+.||.+.
T Consensus        52 ~d~vihla~~~i~~~--~~~~~~~~~~~~~~~~v~~t~~l~~~~~~--~~~~~~~~i~~Ss~~v  111 (298)
T 4b4o_A           52 CDAAVNLAGENILNP--LRRWNETFQKEVLGSRLETTQLLAKAITK--APQPPKAWVLVTGVAY  111 (298)
T ss_dssp             CSEEEECCCCCSSCT--TSCCCHHHHHHHHHHHHHHHHHHHHHHHH--CSSCCSEEEEEEEGGG
T ss_pred             CCEEEEeccCcccch--hhhhhhhhhhhhhhHHHHHHHHHHHHHHH--hCCCceEEEEEeeeee
Confidence            899999998643322  33457777788999999988877776532  1233455777777653

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.92  E-value=6.2e-09  Score=78.95  Aligned_cols=79  Identities=23%  Similarity=0.217  Sum_probs=57.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++||||++|+|.++++.+...|++|++++|++++.+.+    ++.  +..   ...|.+++    +..+.+.+...
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~--g~~---~~~d~~~~----~~~~~~~~~~~  104 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRL--GVE---YVGDSRSV----DFADEILELTD  104 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTT--CCS---EEEETTCS----THHHHHHHHTT
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHc--CCC---EEeeCCcH----HHHHHHHHHhC
Confidence            489999999999999999999999999999999998776543    222  222   12355543    23345555444


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      +..+|++|||+|
T Consensus       105 ~~~~D~vi~~~g  116 (198)
T 1pqw_A          105 GYGVDVVLNSLA  116 (198)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCCeEEEECCc
Confidence            336999999997

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.87  E-value=3.5e-10  Score=98.43  Aligned_cols=101  Identities=15%  Similarity=0.171  Sum_probs=67.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.||+++|||| +|+|+++++.|++.|++|++++|+.++++++.+++.     .+.    .++. +  .        +.+
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~-----~~~----~~~~-d--l--------~~~  420 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG-----GKA----LSLT-D--L--------DNY  420 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT-----C-C----EETT-T--T--------TTC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-----Cce----eeHH-H--h--------hhc
Confidence            46899999999 599999999999999999999999988887766541     111    1221 1  1        111


Q ss_pred             cCCCccEEEEcCCCCCCC---cccccCCCHHHHHHHhHhhhhHHH
Q 045749          141 DGLEVGVLINNVGITYPK---AMFFHEVDEKEWMDIVRVNLEGTT  182 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~---~~~~~~~~~~~~~~~~~vN~~g~~  182 (210)
                      ...++|++|||+|.....   ..++.+.+.++++.++++|+.+..
T Consensus       421 ~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          421 HPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             --CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             cccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence            112589999999975321   123455667778889999998753

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.87  E-value=5.4e-11  Score=101.64  Aligned_cols=136  Identities=15%  Similarity=0.146  Sum_probs=76.8

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCC----CceeEEEEEecccCccchhhH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENP----NTQINIVEYDFSCDVVSAGNI  133 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~----~~~~~~~~~D~~~~~~~~~~~  133 (210)
                      ...+.||+++|||++ |||+++|+.|+..|++|+++++++.+.++...+......    .....++......    ...+
T Consensus       260 g~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~----~~vl  334 (488)
T 3ond_A          260 DVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGN----KDII  334 (488)
T ss_dssp             CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSC----SCSB
T ss_pred             CCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCC----hhhh
Confidence            345679999999997 999999999999999999999998776654432100000    0011111100001    1111


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHH-------hHhhhhHHHHHH-HHHHHHhHhCCCCEEEEecc
Q 045749          134 KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDI-------VRVNLEGTTRVT-KAVLTGMMRRKKGAIVNIGS  205 (210)
Q Consensus       134 ~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~-------~~vN~~g~~~l~-~~~l~~m~~~~~g~iv~isS  205 (210)
                      ..  +.+...+.+.+|+|+|...      .+.+.+.++..       +..|+.+..... +..++.|   ..|+|||+||
T Consensus       335 ~~--e~l~~mk~gaiVvNaG~~~------~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lL---aeGRIVNlsS  403 (488)
T 3ond_A          335 ML--DHMKKMKNNAIVCNIGHFD------NEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIIL---AEGRLMNLGC  403 (488)
T ss_dssp             CH--HHHTTSCTTEEEEESSSTT------TTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEE---GGGSCHHHHH
T ss_pred             hH--HHHHhcCCCeEEEEcCCCC------cccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHH---cCCcEEEEec
Confidence            11  1222224567888888642      24466666554       233333332222 2223322   2389999999


Q ss_pred             cccc
Q 045749          206 GAAI  209 (210)
Q Consensus       206 ~ag~  209 (210)
                      +.|+
T Consensus       404 ~~G~  407 (488)
T 3ond_A          404 ATGH  407 (488)
T ss_dssp             SCCS
T ss_pred             Cccc
Confidence            9875

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.84  E-value=1.9e-08  Score=69.40  Aligned_cols=73  Identities=14%  Similarity=0.184  Sum_probs=55.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +++++|+|+ |++|.++++.|.++| ++|++++|++++++...    .    ..+.....|+++.       +.+.+.+.
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~-------~~~~~~~~   68 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDE-------AGLAKALG   68 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCH-------HHHHHHTT
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCH-------HHHHHHHc
Confidence            578999999 999999999999999 89999999988776543    1    2334556666544       23444444


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                        ++|++|++++
T Consensus        69 --~~d~vi~~~~   78 (118)
T 3ic5_A           69 --GFDAVISAAP   78 (118)
T ss_dssp             --TCSEEEECSC
T ss_pred             --CCCEEEECCC
Confidence              5899999996

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.77  E-value=2.9e-08  Score=83.72  Aligned_cols=82  Identities=24%  Similarity=0.335  Sum_probs=63.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC---CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           64 SWALITGATDGIGKAFAHQLAQHG---LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G---~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.++|+|| +|+|+++++.|++.|   .+|++++|+.+++++..+++.... +.++..+.+|+++.    +.++++.+..
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~----~~l~~~l~~~   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSI----EELVALINEV   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCH----HHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCH----HHHHHHHHhh
Confidence            46889999 899999999999998   489999999999999888886543 24567778887765    3333333333


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                         ++|++|||||.
T Consensus        76 ---~~DvVin~ag~   86 (405)
T 4ina_A           76 ---KPQIVLNIALP   86 (405)
T ss_dssp             ---CCSEEEECSCG
T ss_pred             ---CCCEEEECCCc
Confidence               48999999985

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.76  E-value=3.5e-08  Score=80.85  Aligned_cols=80  Identities=15%  Similarity=0.240  Sum_probs=57.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++||||++|||.++++.+...|++|+++++++++++.+ +++     +..   ..+|.++..+..   +.+.+..+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~~~~---~~~~~~~~  212 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-----GFD---AAFNYKTVNSLE---EALKKASP  212 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSCSCHH---HHHHHHCT
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-----CCc---EEEecCCHHHHH---HHHHHHhC
Confidence            489999999999999999999999999999999998877655 332     221   224666522222   33333333


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                       ..+|++|||+|.
T Consensus       213 -~~~d~vi~~~g~  224 (333)
T 1v3u_A          213 -DGYDCYFDNVGG  224 (333)
T ss_dssp             -TCEEEEEESSCH
T ss_pred             -CCCeEEEECCCh
Confidence             269999999984

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.74  E-value=2e-08  Score=80.91  Aligned_cols=82  Identities=28%  Similarity=0.374  Sum_probs=59.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++|||++ |+|+++++.|++.| +|++++|+.++++++.+++....... . .+.+|+++.          .+.
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~-~-~~~~d~~~~----------~~~  190 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKK-F-GEEVKFSGL----------DVD  190 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCC-H-HHHEEEECT----------TCC
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccc-c-ceeEEEeeH----------HHh
Confidence            3568999999997 99999999999999 99999999999888887775431000 0 112344331          112


Q ss_pred             hcCCCccEEEEcCCCCCC
Q 045749          140 IDGLEVGVLINNVGITYP  157 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~  157 (210)
                      ++  ++|++|||+|....
T Consensus       191 ~~--~~DilVn~ag~~~~  206 (287)
T 1nvt_A          191 LD--GVDIIINATPIGMY  206 (287)
T ss_dssp             CT--TCCEEEECSCTTCT
T ss_pred             hC--CCCEEEECCCCCCC
Confidence            22  68999999997653

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.72  E-value=3.9e-08  Score=81.90  Aligned_cols=107  Identities=20%  Similarity=0.261  Sum_probs=68.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+.+++++|+|+ +++|+++++.+...|++|++++|++++++.+.+.+     +..   +..|.++.    +   .+.+.
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-----g~~---~~~~~~~~----~---~l~~~  226 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-----GGR---VITLTATE----A---NIKKS  226 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTS---EEEEECCH----H---HHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-----Cce---EEEecCCH----H---HHHHH
Confidence            366899999999 99999999999999999999999998776654332     222   23444433    2   22233


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +.  +.|++|+|+|......                     +..+.+..++.|+  +.|.||++++..
T Consensus       227 ~~--~~DvVi~~~g~~~~~~---------------------~~li~~~~l~~mk--~gg~iV~v~~~~  269 (369)
T 2eez_A          227 VQ--HADLLIGAVLVPGAKA---------------------PKLVTRDMLSLMK--EGAVIVDVAVDQ  269 (369)
T ss_dssp             HH--HCSEEEECCC----------------------------CCSCHHHHTTSC--TTCEEEECC---
T ss_pred             Hh--CCCEEEECCCCCcccc---------------------chhHHHHHHHhhc--CCCEEEEEecCC
Confidence            33  4889999998642110                     0122355566663  458999998864

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.71  E-value=9.4e-08  Score=78.04  Aligned_cols=79  Identities=16%  Similarity=0.188  Sum_probs=58.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++||||++|+|.++++.+...|++|+++++++++++.+.+ +     +..   ...|.+++    +..+++.+...
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~-----g~~---~~~~~~~~----~~~~~~~~~~~  206 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAW---QVINYREE----DLVERLKEITG  206 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTS----CHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCC---EEEECCCc----cHHHHHHHHhC
Confidence            48999999999999999999999999999999999887765533 2     221   12355443    33445555544


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      +..+|++|||+|
T Consensus       207 ~~~~D~vi~~~g  218 (327)
T 1qor_A          207 GKKVRVVYDSVG  218 (327)
T ss_dssp             TCCEEEEEECSC
T ss_pred             CCCceEEEECCc
Confidence            446999999998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.70  E-value=1.1e-07  Score=77.90  Aligned_cols=80  Identities=19%  Similarity=0.314  Sum_probs=59.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++||||++|+|.++++.+...|++|++++|++++++.+.+ +     +..   ...|.+++    +..+++.+..+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~-----g~~---~~~d~~~~----~~~~~i~~~~~  211 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L-----GCH---HTINYSTQ----DFAEVVREITG  211 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTS----CHHHHHHHHHT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCC---EEEECCCH----HHHHHHHHHhC
Confidence            38899999999999999999999999999999999887765432 2     222   12355443    23445555544


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|++|||+|.
T Consensus       212 ~~~~d~vi~~~g~  224 (333)
T 1wly_A          212 GKGVDVVYDSIGK  224 (333)
T ss_dssp             TCCEEEEEECSCT
T ss_pred             CCCCeEEEECCcH
Confidence            3469999999985

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.68  E-value=1.5e-07  Score=77.85  Aligned_cols=80  Identities=16%  Similarity=0.308  Sum_probs=59.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|.++++.+...|++|+++++++++++.+ +++     +..   ..+|.+++    +..+.+.+..+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~----~~~~~~~~~~~  228 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL-----GAA---AGFNYKKE----DFSEATLKFTK  228 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCS---EEEETTTS----CHHHHHHHHTT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEecCCh----HHHHHHHHHhc
Confidence            489999999999999999999999999999999998887655 333     221   12455443    33455555544


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|++|+|+|.
T Consensus       229 ~~~~d~vi~~~G~  241 (354)
T 2j8z_A          229 GAGVNLILDCIGG  241 (354)
T ss_dssp             TSCEEEEEESSCG
T ss_pred             CCCceEEEECCCc
Confidence            3469999999985

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.67  E-value=1.2e-07  Score=77.55  Aligned_cols=120  Identities=18%  Similarity=0.189  Sum_probs=78.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCh--hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL-------NLILVSRNH--NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~-------~Vi~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      .+++||||+|.||..++..|+++|.       .|++.|+++  ++.+....++...  ...+  . .|+.+...      
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--~~~~--~-~di~~~~~------   73 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--AFPL--L-AGLEATDD------   73 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--TCTT--E-EEEEEESC------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--cccc--c-CCeEeccC------
Confidence            4699999999999999999999996       799999875  3333333344321  1111  2 35554311      


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          135 AIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                       ..+.+.  +.|++||.||.... +    ..++   ++.+++|+.++..+.+++...-  ..+++++++|+..
T Consensus        74 -~~~a~~--~~D~Vih~Ag~~~~-~----~~~~---~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~  133 (327)
T 1y7t_A           74 -PKVAFK--DADYALLVGAAPRK-A----GMER---RDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPA  133 (327)
T ss_dssp             -HHHHTT--TCSEEEECCCCCCC-T----TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSH
T ss_pred             -hHHHhC--CCCEEEECCCcCCC-C----CCCH---HHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCch
Confidence             222333  48999999997542 1    1233   3579999999999988865421  1346888888753

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.64  E-value=1.1e-08  Score=75.05  Aligned_cols=77  Identities=9%  Similarity=0.068  Sum_probs=56.9

Q ss_pred             hHHHHHHHHHHHcCCeEEEEecChhHHH---HHHHHHHhhCCCceeEEEEEecccC--ccchhhHHHHHHHhcCCCccEE
Q 045749           74 GIGKAFAHQLAQHGLNLILVSRNHNKLE---KISNEIQAENPNTQINIVEYDFSCD--VVSAGNIKAIEMAIDGLEVGVL  148 (210)
Q Consensus        74 GiG~~~a~~l~~~G~~Vi~~~r~~~~l~---~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~~id~l  148 (210)
                      -++.+.++.|++.|++|++..|++++.+   +..+++++.  +.+...+++|++++  ...++.++.+.+.++  + |+|
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G--~-dVL  101 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKG--K-DVL  101 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHHTTT--S-CEE
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHhcCC--C-CEE
Confidence            3678999999999999999998765432   234445444  56778888899887  666666666666555  5 899


Q ss_pred             EEcCCCC
Q 045749          149 INNVGIT  155 (210)
Q Consensus       149 vnnAg~~  155 (210)
                      |||||..
T Consensus       102 VnnAgg~  108 (157)
T 3gxh_A          102 VHCLANY  108 (157)
T ss_dssp             EECSBSH
T ss_pred             EECCCCC
Confidence            9999974

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.64  E-value=1.3e-07  Score=78.20  Aligned_cols=78  Identities=17%  Similarity=0.240  Sum_probs=57.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      ++++||||++|+|..+++.+...|+ +|+++++++++++.+.+++     +..   ..+|..++    +..+.+.+..++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~----~~~~~~~~~~~~  229 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL-----GFD---AAINYKKD----NVAEQLRESCPA  229 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS-----CCS---EEEETTTS----CHHHHHHHHCTT
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CCc---eEEecCch----HHHHHHHHhcCC
Confidence            8999999999999999999999999 9999999987776554322     221   12455543    233445444444


Q ss_pred             CCccEEEEcCCC
Q 045749          143 LEVGVLINNVGI  154 (210)
Q Consensus       143 ~~id~lvnnAg~  154 (210)
                       .+|++|+|+|.
T Consensus       230 -~~d~vi~~~G~  240 (357)
T 2zb4_A          230 -GVDVYFDNVGG  240 (357)
T ss_dssp             -CEEEEEESCCH
T ss_pred             -CCCEEEECCCH
Confidence             69999999983

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.61  E-value=1.1e-07  Score=78.49  Aligned_cols=80  Identities=15%  Similarity=0.240  Sum_probs=58.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|.++++.+...|++|+++++++++++.+ ++   .  +..   ...|.+++    +..+++.+..+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~---~--ga~---~~~d~~~~----~~~~~~~~~~~  236 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQ---N--GAH---EVFNHREV----NYIDKIKKYVG  236 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---T--TCS---EEEETTST----THHHHHHHHHC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HH---c--CCC---EEEeCCCc----hHHHHHHHHcC
Confidence            388999999999999999999999999999999998877633 22   2  221   12355433    33455655555


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|++|+|+|.
T Consensus       237 ~~~~D~vi~~~G~  249 (351)
T 1yb5_A          237 EKGIDIIIEMLAN  249 (351)
T ss_dssp             TTCEEEEEESCHH
T ss_pred             CCCcEEEEECCCh
Confidence            4469999999974

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.60  E-value=5e-07  Score=73.55  Aligned_cols=84  Identities=21%  Similarity=0.331  Sum_probs=61.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC---hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN---HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~---~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      .++.||+++|+|+ +|+|++++..|++.|+ +|++++|+   .++++++.+++.... +..+.  ..++.+.       +
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~-~~~~~--~~~~~~~-------~  218 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT-DCKAQ--LFDIEDH-------E  218 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEE--EEETTCH-------H
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc-CCceE--EeccchH-------H
Confidence            4567999999998 6999999999999999 89999999   888888888887654 22222  2233221       2


Q ss_pred             HHHHHhcCCCccEEEEcCCCC
Q 045749          135 AIEMAIDGLEVGVLINNVGIT  155 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~  155 (210)
                      .+.+...  +.|++||+....
T Consensus       219 ~l~~~l~--~aDiIINaTp~G  237 (315)
T 3tnl_A          219 QLRKEIA--ESVIFTNATGVG  237 (315)
T ss_dssp             HHHHHHH--TCSEEEECSSTT
T ss_pred             HHHhhhc--CCCEEEECccCC
Confidence            3334444  478999987654

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.59  E-value=2.3e-07  Score=76.40  Aligned_cols=80  Identities=24%  Similarity=0.287  Sum_probs=57.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|.++++.+...|++|++++|++++++.+. +   .  +..   ...|.+++.+..   +.+.+...
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~---~--g~~---~~~d~~~~~~~~---~~~~~~~~  236 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S---I--GGE---VFIDFTKEKDIV---GAVLKATD  236 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-H---T--TCC---EEEETTTCSCHH---HHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-H---c--CCc---eEEecCccHhHH---HHHHHHhC
Confidence            4899999999999999999999999999999999988765432 2   2  222   124666443333   33444344


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      + .+|++|+|+|.
T Consensus       237 ~-~~D~vi~~~g~  248 (347)
T 2hcy_A          237 G-GAHGVINVSVS  248 (347)
T ss_dssp             S-CEEEEEECSSC
T ss_pred             C-CCCEEEECCCc
Confidence            4 69999999984

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.58  E-value=1.7e-07  Score=76.73  Aligned_cols=80  Identities=16%  Similarity=0.267  Sum_probs=58.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|.+.++.+...|++|+++++++++++.+.+++     +..   ...|..++    +..+.+.+..+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~----~~~~~~~~~~~  216 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-----GFD---GAIDYKNE----DLAAGLKRECP  216 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-----CCS---EEEETTTS----CHHHHHHHHCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCC---EEEECCCH----HHHHHHHHhcC
Confidence            4899999999999999999999999999999999988776553332     221   12344443    23344544443


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      + .+|++++|+|.
T Consensus       217 ~-~~d~vi~~~g~  228 (336)
T 4b7c_A          217 K-GIDVFFDNVGG  228 (336)
T ss_dssp             T-CEEEEEESSCH
T ss_pred             C-CceEEEECCCc
Confidence            3 69999999984

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.56  E-value=2.3e-07  Score=76.29  Aligned_cols=81  Identities=11%  Similarity=0.233  Sum_probs=57.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|..+++.+...|++|+++++++++++.+.+++     +..   ...|.+++.+..+   .+.+..+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~~~~~~---~~~~~~~  223 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-----GFD---DAFNYKEESDLTA---ALKRCFP  223 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-----CCS---EEEETTSCSCSHH---HHHHHCT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCc---eEEecCCHHHHHH---HHHHHhC
Confidence            4899999999999999999999999999999999988776543222     221   1246655433333   3333222


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                       ..+|++|+|+|.
T Consensus       224 -~~~d~vi~~~g~  235 (345)
T 2j3h_A          224 -NGIDIYFENVGG  235 (345)
T ss_dssp             -TCEEEEEESSCH
T ss_pred             -CCCcEEEECCCH
Confidence             369999999984

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.56  E-value=2.9e-07  Score=73.46  Aligned_cols=77  Identities=16%  Similarity=0.189  Sum_probs=56.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++|+|+ +|+|+++++.|++.|++|++++|+.++++++.+++...  . .     ++..+.   ++    +.+ 
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~--~-~-----~~~~~~---~~----~~~-  178 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--G-S-----IQALSM---DE----LEG-  178 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--S-S-----EEECCS---GG----GTT-
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc--C-C-----eeEecH---HH----hcc-
Confidence            356899999998 79999999999999999999999999888877666432  1 1     122221   11    111 


Q ss_pred             hcCCCccEEEEcCCCCC
Q 045749          140 IDGLEVGVLINNVGITY  156 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~  156 (210)
                       +  +.|++|||+|...
T Consensus       179 -~--~~DivVn~t~~~~  192 (271)
T 1nyt_A          179 -H--EFDLIINATSSGI  192 (271)
T ss_dssp             -C--CCSEEEECCSCGG
T ss_pred             -C--CCCEEEECCCCCC
Confidence             2  6899999999754

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.50  E-value=2.4e-07  Score=79.09  Aligned_cols=78  Identities=15%  Similarity=0.266  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+|+++|+| ++|+|+++++.|++.|++|++++|+.++++++.+++      .....+.+|+++.    +   .+.+.+.
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~------~~~~~~~~Dv~d~----~---~l~~~l~   67 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV------QHSTPISLDVNDD----A---ALDAEVA   67 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC------TTEEEEECCTTCH----H---HHHHHHT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc------CCceEEEeecCCH----H---HHHHHHc
Confidence            368899997 799999999999999999999999987765443221      1245566677654    2   2333333


Q ss_pred             CCCccEEEEcCCCC
Q 045749          142 GLEVGVLINNVGIT  155 (210)
Q Consensus       142 ~~~id~lvnnAg~~  155 (210)
                        ++|++|||++..
T Consensus        68 --~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 --KHDLVISLIPYT   79 (450)
T ss_dssp             --TSSEEEECCC--
T ss_pred             --CCcEEEECCccc
Confidence              589999999864

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.48  E-value=1.1e-06  Score=72.17  Aligned_cols=79  Identities=15%  Similarity=0.241  Sum_probs=57.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|...++.+...|++|+.+++++++++.+. ++     +...   ..|.+++    +..+.+.+..+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----ga~~---~~d~~~~----~~~~~~~~~~~  232 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL-----GADE---TVNYTHP----DWPKEVRRLTG  232 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTST----THHHHHHHHTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCCE---EEcCCcc----cHHHHHHHHhC
Confidence            4889999999999999999999999999999999988876553 22     2221   2455543    22344544443


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      +..+|++|+|+|
T Consensus       233 ~~~~d~vi~~~g  244 (343)
T 2eih_A          233 GKGADKVVDHTG  244 (343)
T ss_dssp             TTCEEEEEESSC
T ss_pred             CCCceEEEECCC
Confidence            336999999998

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.46  E-value=5.5e-07  Score=73.47  Aligned_cols=80  Identities=21%  Similarity=0.252  Sum_probs=59.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|...++.+...|++|+++++++++++.+. ++     +...   ..|..++    +..+.+.+..+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~----~~~~~~~~~~~  206 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL-----GAWE---TIDYSHE----DVAKRVLELTD  206 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTTS----CHHHHHHHHTT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEeCCCc----cHHHHHHHHhC
Confidence            4899999999999999999999999999999999988876543 22     2211   1344332    33455666555


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|++++|+|.
T Consensus       207 ~~g~Dvvid~~g~  219 (325)
T 3jyn_A          207 GKKCPVVYDGVGQ  219 (325)
T ss_dssp             TCCEEEEEESSCG
T ss_pred             CCCceEEEECCCh
Confidence            4479999999985

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.44  E-value=6.7e-07  Score=71.79  Aligned_cols=81  Identities=20%  Similarity=0.265  Sum_probs=59.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++.+|+++|+|+ +|+|++++..|++.|+ +|++++|+.++.+++.+++...++...+..  .+.       +   .+.+
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~--~~~-------~---~l~~  190 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVG--VDA-------R---GIED  190 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEE--ECS-------T---THHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEE--cCH-------H---HHHH
Confidence            456999999998 7999999999999999 699999999999999888876543333222  211       1   1122


Q ss_pred             HhcCCCccEEEEcCCCC
Q 045749          139 AIDGLEVGVLINNVGIT  155 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~  155 (210)
                      ...  +.|++||+....
T Consensus       191 ~l~--~~DiVInaTp~G  205 (283)
T 3jyo_A          191 VIA--AADGVVNATPMG  205 (283)
T ss_dssp             HHH--HSSEEEECSSTT
T ss_pred             HHh--cCCEEEECCCCC
Confidence            222  367999987643

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.44  E-value=7.5e-07  Score=73.32  Aligned_cols=80  Identities=16%  Similarity=0.163  Sum_probs=56.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++||||+||+|...++.+... |++|+++++++++++.+. ++     +..   ...|..++    +..+++.+..
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~-----g~~---~~~~~~~~----~~~~~~~~~~  236 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA-----GAD---YVINASMQ----DPLAEIRRIT  236 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTS----CHHHHHHHHT
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCC---EEecCCCc----cHHHHHHHHh
Confidence            3889999999999999999999999 999999999988776542 22     221   12354433    2234444444


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ....+|++|+|+|.
T Consensus       237 ~~~~~d~vi~~~g~  250 (347)
T 1jvb_A          237 ESKGVDAVIDLNNS  250 (347)
T ss_dssp             TTSCEEEEEESCCC
T ss_pred             cCCCceEEEECCCC
Confidence            31269999999985

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.42  E-value=5.9e-07  Score=73.54  Aligned_cols=80  Identities=21%  Similarity=0.320  Sum_probs=58.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|...++.+...|++|+++++++++++.+. ++     +...   ..|..++    +..+.+.+..+
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~~---~~~~~~~----~~~~~~~~~~~  214 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EY-----GAEY---LINASKE----DILRQVLKFTN  214 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-----TCSE---EEETTTS----CHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCcE---EEeCCCc----hHHHHHHHHhC
Confidence            4899999999999999999999999999999999988776432 22     2211   1343332    33455655554


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|++++|+|.
T Consensus       215 ~~g~D~vid~~g~  227 (334)
T 3qwb_A          215 GKGVDASFDSVGK  227 (334)
T ss_dssp             TSCEEEEEECCGG
T ss_pred             CCCceEEEECCCh
Confidence            4479999999984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.40  E-value=9.6e-07  Score=72.91  Aligned_cols=79  Identities=19%  Similarity=0.335  Sum_probs=57.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|...++.+...|++|+++++++++++.+.+ +     +...   ..|..++    +..+.+.+.. 
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~---~~~~~~~----~~~~~~~~~~-  232 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L-----GAKR---GINYRSE----DFAAVIKAET-  232 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-----TCSE---EEETTTS----CHHHHHHHHH-
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCCE---EEeCCch----HHHHHHHHHh-
Confidence            48899999999999999999999999999999999988765432 2     2211   1344433    2234444444 


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|++++|+|.
T Consensus       233 ~~g~Dvvid~~g~  245 (353)
T 4dup_A          233 GQGVDIILDMIGA  245 (353)
T ss_dssp             SSCEEEEEESCCG
T ss_pred             CCCceEEEECCCH
Confidence            3379999999984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.40  E-value=7.2e-07  Score=73.24  Aligned_cols=80  Identities=20%  Similarity=0.280  Sum_probs=58.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|...++.+...|++|+++++++++++.+.+ +     +...   ..|..++    +..+.+.+..+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----ga~~---~~~~~~~----~~~~~~~~~~~  210 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L-----GAAY---VIDTSTA----PLYETVMELTN  210 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSE---EEETTTS----CHHHHHHHHTT
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C-----CCcE---EEeCCcc----cHHHHHHHHhC
Confidence            48999999999999999999888899999999999888765533 2     2221   1344332    33455555555


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|++++|+|.
T Consensus       211 ~~g~Dvvid~~g~  223 (340)
T 3gms_A          211 GIGADAAIDSIGG  223 (340)
T ss_dssp             TSCEEEEEESSCH
T ss_pred             CCCCcEEEECCCC
Confidence            4479999999984

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.40  E-value=1.1e-06  Score=72.34  Aligned_cols=79  Identities=25%  Similarity=0.383  Sum_probs=57.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|...++.+...|++|+++++++++++.+.+ +     +... .  .|..     .+..+.+.+..+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~-----ga~~-v--~~~~-----~~~~~~v~~~~~  224 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V-----GADI-V--LPLE-----EGWAKAVREATG  224 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H-----TCSE-E--EESS-----TTHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCcE-E--ecCc-----hhHHHHHHHHhC
Confidence            48999999999999999999999999999999999888764432 2     2211 1  2322     233455655555


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|++++|+|.
T Consensus       225 ~~g~Dvvid~~g~  237 (342)
T 4eye_A          225 GAGVDMVVDPIGG  237 (342)
T ss_dssp             TSCEEEEEESCC-
T ss_pred             CCCceEEEECCch
Confidence            4469999999985

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.36  E-value=8.1e-07  Score=75.64  Aligned_cols=42  Identities=24%  Similarity=0.272  Sum_probs=37.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|++|+|+||++|+|...++.+...|++|+++++++++++.+
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~  261 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV  261 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            489999999999999999998889999999999998877654

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.30  E-value=4.9e-06  Score=67.60  Aligned_cols=84  Identities=19%  Similarity=0.323  Sum_probs=59.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC---hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN---HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~---~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      .++.||+++|+|+ +|.|++++..|++.|+ +|++++|+   .++++++.+++.... +..+.  ..+..+.       +
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~-~~~v~--~~~~~~l-------~  212 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT-DCVVT--VTDLADQ-------H  212 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS-SCEEE--EEETTCH-------H
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc-CcceE--EechHhh-------h
Confidence            4566999999997 8999999999999998 79999999   888888888887653 22222  2222211       1


Q ss_pred             HHHHHhcCCCccEEEEcCCCC
Q 045749          135 AIEMAIDGLEVGVLINNVGIT  155 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~  155 (210)
                      .+.+...  +.|++||+....
T Consensus       213 ~~~~~l~--~~DiIINaTp~G  231 (312)
T 3t4e_A          213 AFTEALA--SADILTNGTKVG  231 (312)
T ss_dssp             HHHHHHH--HCSEEEECSSTT
T ss_pred             hhHhhcc--CceEEEECCcCC
Confidence            1222333  478999987654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.30  E-value=1.3e-06  Score=74.86  Aligned_cols=80  Identities=16%  Similarity=0.294  Sum_probs=55.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .++.++.++|+|| ||+|+++++.|++. |++|++++|+.++++++.++   .  +  +..+.+|+.+.    +   .+.
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---~--~--~~~~~~D~~d~----~---~l~   83 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---S--G--SKAISLDVTDD----S---ALD   83 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---G--T--CEEEECCTTCH----H---HHH
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---c--C--CcEEEEecCCH----H---HHH
Confidence            3456889999997 99999999999998 78999999998887665432   1  2  34455666543    2   222


Q ss_pred             HHhcCCCccEEEEcCCCC
Q 045749          138 MAIDGLEVGVLINNVGIT  155 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~  155 (210)
                      +.+.  ++|++||+++..
T Consensus        84 ~~l~--~~DvVIn~tp~~   99 (467)
T 2axq_A           84 KVLA--DNDVVISLIPYT   99 (467)
T ss_dssp             HHHH--TSSEEEECSCGG
T ss_pred             HHHc--CCCEEEECCchh
Confidence            3333  488999999864

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.29  E-value=1.9e-06  Score=71.47  Aligned_cols=75  Identities=20%  Similarity=0.237  Sum_probs=52.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh---hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH---NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~---~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      +.|++++|+|| +|+|...++.+...|++|+++++++   ++++.+ +++     +..  .+  | .+  +..   +++.
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~-----ga~--~v--~-~~--~~~---~~~~  241 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET-----KTN--YY--N-SS--NGY---DKLK  241 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH-----TCE--EE--E-CT--TCS---HHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh-----CCc--ee--c-hH--HHH---HHHH
Confidence            44899999999 9999999999999999999999987   665433 222     221  12  4 33  222   2333


Q ss_pred             HHhcCCCccEEEEcCCC
Q 045749          138 MAIDGLEVGVLINNVGI  154 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~  154 (210)
                      + .+ ..+|++|+|+|.
T Consensus       242 ~-~~-~~~d~vid~~g~  256 (366)
T 2cdc_A          242 D-SV-GKFDVIIDATGA  256 (366)
T ss_dssp             H-HH-CCEEEEEECCCC
T ss_pred             H-hC-CCCCEEEECCCC
Confidence            3 22 269999999984

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.28  E-value=6.7e-06  Score=65.52  Aligned_cols=78  Identities=22%  Similarity=0.313  Sum_probs=56.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++.+|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++....   .+.  ..|+.      +    +.+ 
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~---~~~--~~~~~------~----~~~-  178 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG---NIQ--AVSMD------S----IPL-  178 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS---CEE--EEEGG------G----CCC-
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC---CeE--EeeHH------H----hcc-
Confidence            456899999998 799999999999999999999999999888877764321   121  12321      0    000 


Q ss_pred             hcCCCccEEEEcCCCCCC
Q 045749          140 IDGLEVGVLINNVGITYP  157 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~  157 (210)
                       +  +.|++|||++....
T Consensus       179 -~--~~DivIn~t~~~~~  193 (272)
T 1p77_A          179 -Q--TYDLVINATSAGLS  193 (272)
T ss_dssp             -S--CCSEEEECCCC---
T ss_pred             -C--CCCEEEECCCCCCC
Confidence             2  58999999987643

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=98.22  E-value=8.8e-06  Score=66.90  Aligned_cols=79  Identities=20%  Similarity=0.197  Sum_probs=55.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+|| +++|...++.+...|+ +|+++++++++++.+. ++     +...   ..|..++    +..+++.+..
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~----~~~~~v~~~~  232 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV-----GADY---VINPFEE----DVVKEVMDIT  232 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH-----TCSE---EECTTTS----CHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCCE---EECCCCc----CHHHHHHHHc
Confidence            6899999999 9999999998888999 8999999988766443 22     2211   1233322    2334555544


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++..+|++|+++|.
T Consensus       233 ~g~g~D~vid~~g~  246 (348)
T 2d8a_A          233 DGNGVDVFLEFSGA  246 (348)
T ss_dssp             TTSCEEEEEECSCC
T ss_pred             CCCCCCEEEECCCC
Confidence            43369999999983

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.20  E-value=2.6e-06  Score=60.54  Aligned_cols=75  Identities=15%  Similarity=0.198  Sum_probs=51.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH-h
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA-I  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~  140 (210)
                      +++.++|+|+ |++|..+++.|.+.|++|+++++++++.++.    .+.  +  ...+..|.++.    +   .+.+. .
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~--~--~~~~~~d~~~~----~---~l~~~~~   68 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASY--A--THAVIANATEE----N---ELLSLGI   68 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTT--C--SEEEECCTTCH----H---HHHTTTG
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHh--C--CEEEEeCCCCH----H---HHHhcCC
Confidence            4677999998 9999999999999999999999997665432    111  1  23444554432    2   22221 2


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      .  +.|++|++++.
T Consensus        69 ~--~~d~vi~~~~~   80 (144)
T 2hmt_A           69 R--NFEYVIVAIGA   80 (144)
T ss_dssp             G--GCSEEEECCCS
T ss_pred             C--CCCEEEECCCC
Confidence            2  58899998873

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.19  E-value=7e-06  Score=58.49  Aligned_cols=74  Identities=16%  Similarity=0.250  Sum_probs=52.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      ++.++|+|+ |.+|.++++.|.++|++|+++++++++.++..+    .  +  ..++..|.+++    +.   +.+ .+-
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~--~--~~~~~gd~~~~----~~---l~~-~~~   68 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E--G--FDAVIADPTDE----SF---YRS-LDL   68 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--T--CEEEECCTTCH----HH---HHH-SCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C--C--CcEEECCCCCH----HH---HHh-CCc
Confidence            567999998 779999999999999999999999887665432    1  2  34566676655    22   222 222


Q ss_pred             CCccEEEEcCC
Q 045749          143 LEVGVLINNVG  153 (210)
Q Consensus       143 ~~id~lvnnAg  153 (210)
                      .+.|.+|.+.+
T Consensus        69 ~~~d~vi~~~~   79 (141)
T 3llv_A           69 EGVSAVLITGS   79 (141)
T ss_dssp             TTCSEEEECCS
T ss_pred             ccCCEEEEecC
Confidence            25788887765

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.18  E-value=3.3e-06  Score=69.53  Aligned_cols=79  Identities=9%  Similarity=0.125  Sum_probs=55.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +++++|+||++|+|...++.+...|++|+++++++++++.+. ++     +...   ..|..++    +..+.+.+..++
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~----~~~~~v~~~~~~  231 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI-----GAAH---VLNEKAP----DFEATLREVMKA  231 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH-----TCSE---EEETTST----THHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEECCcH----HHHHHHHHHhcC
Confidence            489999999999999999988899999999999998876553 22     2211   1343332    233444444332


Q ss_pred             CCccEEEEcCCC
Q 045749          143 LEVGVLINNVGI  154 (210)
Q Consensus       143 ~~id~lvnnAg~  154 (210)
                      ..+|++++|+|.
T Consensus       232 ~g~D~vid~~g~  243 (349)
T 3pi7_A          232 EQPRIFLDAVTG  243 (349)
T ss_dssp             HCCCEEEESSCH
T ss_pred             CCCcEEEECCCC
Confidence            259999999983

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.16  E-value=4e-06  Score=69.43  Aligned_cols=79  Identities=15%  Similarity=0.143  Sum_probs=55.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|...++.+...|++|+++++++++++.+.+    .  +...   ..|..++    +..+.+.+..+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~--Ga~~---~~~~~~~----~~~~~~~~~~~  229 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----L--GCDR---PINYKTE----PVGTVLKQEYP  229 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T--TCSE---EEETTTS----CHHHHHHHHCT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----c--CCcE---EEecCCh----hHHHHHHHhcC
Confidence            38899999999999999999999999999999999877665432    2  2221   1344332    22233433332


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                       ..+|++|+|+|.
T Consensus       230 -~g~D~vid~~g~  241 (362)
T 2c0c_A          230 -EGVDVVYESVGG  241 (362)
T ss_dssp             -TCEEEEEECSCT
T ss_pred             -CCCCEEEECCCH
Confidence             369999999984

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.16  E-value=4.9e-05  Score=62.17  Aligned_cols=120  Identities=17%  Similarity=0.147  Sum_probs=78.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecC----hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhh
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL-------NLILVSRN----HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGN  132 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~-------~Vi~~~r~----~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~  132 (210)
                      .+++||||+|.+|..++..|+.+|.       .|++.|++    +++++....++.+..  ...   ..|+....     
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~--~~~---~~~i~~~~-----   75 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA--FPL---LAGMTAHA-----   75 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT--CTT---EEEEEEES-----
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc--ccc---cCcEEEec-----
Confidence            4699999999999999999999885       79999999    666666566665421  111   12333221     


Q ss_pred             HHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          133 IKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       133 ~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                        ...+.+.  +.|++|+.||.... +    ..+.+   +.++.|+...-.+.+.+..+-  ...++++++|.-.
T Consensus        76 --~~~~al~--~aD~Vi~~ag~~~~-~----g~~r~---dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv  136 (329)
T 1b8p_A           76 --DPMTAFK--DADVALLVGARPRG-P----GMERK---DLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPA  136 (329)
T ss_dssp             --SHHHHTT--TCSEEEECCCCCCC-T----TCCHH---HHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSH
T ss_pred             --CcHHHhC--CCCEEEEeCCCCCC-C----CCCHH---HHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCch
Confidence              1233344  47899999997543 1    22333   367888887777777754320  1457899998643

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=98.13  E-value=2.2e-05  Score=64.43  Aligned_cols=77  Identities=16%  Similarity=0.235  Sum_probs=54.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|...++.+...|++|+++ +++++++.+ +++     +...    .| .++    +..+.+.+..+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l-----Ga~~----i~-~~~----~~~~~~~~~~~  213 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL-----GATP----ID-ASR----EPEDYAAEHTA  213 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH-----TSEE----EE-TTS----CHHHHHHHHHT
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc-----CCCE----ec-cCC----CHHHHHHHHhc
Confidence            48999999999999999999999999999999 777775543 222     3221    34 222    22344555554


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|++++|+|.
T Consensus       214 ~~g~D~vid~~g~  226 (343)
T 3gaz_A          214 GQGFDLVYDTLGG  226 (343)
T ss_dssp             TSCEEEEEESSCT
T ss_pred             CCCceEEEECCCc
Confidence            4479999999984

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.05  E-value=1.6e-05  Score=64.13  Aligned_cols=78  Identities=18%  Similarity=0.308  Sum_probs=56.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++....  ..  .  .+          .+.+.+
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~--~~--~--~~----------~~~~~~  200 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR--SA--Y--FS----------LAEAET  200 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS--CC--E--EC----------HHHHHH
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc--Cc--e--ee----------HHHHHh
Confidence            356899999998 7999999999999998 89999999988887766542210  01  0  11          123444


Q ss_pred             HhcCCCccEEEEcCCCCC
Q 045749          139 AIDGLEVGVLINNVGITY  156 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~  156 (210)
                      ...  +.|++||+.+...
T Consensus       201 ~~~--~aDivIn~t~~~~  216 (297)
T 2egg_A          201 RLA--EYDIIINTTSVGM  216 (297)
T ss_dssp             TGG--GCSEEEECSCTTC
T ss_pred             hhc--cCCEEEECCCCCC
Confidence            444  5889999998754

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=98.04  E-value=2.3e-05  Score=64.32  Aligned_cols=78  Identities=14%  Similarity=0.178  Sum_probs=55.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++++|...++.+...|++|+++++++++++.+.+ +     +...   ..|..+     +..+.+.+. .
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~---vi~~~~-----~~~~~~~~~-~  214 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M-----GADI---VLNHKE-----SLLNQFKTQ-G  214 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H-----TCSE---EECTTS-----CHHHHHHHH-T
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCcE---EEECCc-----cHHHHHHHh-C
Confidence            58999999999999999999988999999999999887665433 2     2211   122221     223444444 3


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|++++|+|.
T Consensus       215 ~~g~Dvv~d~~g~  227 (346)
T 3fbg_A          215 IELVDYVFCTFNT  227 (346)
T ss_dssp             CCCEEEEEESSCH
T ss_pred             CCCccEEEECCCc
Confidence            3368999998874

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=98.03  E-value=1.2e-05  Score=63.26  Aligned_cols=60  Identities=32%  Similarity=0.426  Sum_probs=49.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCh-------------------hHHHHHHHHHHhhCCCceeEEE
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNH-------------------NKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~-------------------~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      ++.+++|+|.|+ +|+|.++++.|++.|. +++++|++.                   .+.+.+.+.+.+.+|..++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            345789999986 7999999999999997 799999987                   7888888888887766665554


Q ss_pred             E
Q 045749          120 E  120 (210)
Q Consensus       120 ~  120 (210)
                      .
T Consensus       107 ~  107 (249)
T 1jw9_B          107 N  107 (249)
T ss_dssp             C
T ss_pred             e
Confidence            4

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.03  E-value=1.5e-05  Score=67.98  Aligned_cols=84  Identities=21%  Similarity=0.208  Sum_probs=57.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCcc-------------
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVV-------------  128 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~-------------  128 (210)
                      .|++|+|+||++|+|...++.....|++|+++++++++++.+ +++     +...   ..|..+++.             
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~---vi~~~~~d~~~~~~~~~~~~~~  298 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM-----GAEA---IIDRNAEGYRFWKDENTQDPKE  298 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH-----TCCE---EEETTTTTCCSEEETTEECHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh-----CCcE---EEecCcCcccccccccccchHH
Confidence            489999999999999999988888999999999988877654 233     2211   123332211             


Q ss_pred             chhhHHHHHHHhcCCCccEEEEcCCC
Q 045749          129 SAGNIKAIEMAIDGLEVGVLINNVGI  154 (210)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lvnnAg~  154 (210)
                      .++..+.+.+..++..+|++++++|.
T Consensus       299 ~~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          299 WKRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence            12223555555554479999999883

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=98.00  E-value=2.8e-05  Score=64.36  Aligned_cols=75  Identities=16%  Similarity=0.187  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+|+ +|+|...++.+...|++|+++++++++++.+.+++     +...   ..|..+    .   +.+.+..+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~---v~~~~~----~---~~~~~~~~  250 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-----GADS---FLVSRD----Q---EQMQAAAG  250 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-----CCSE---EEETTC----H---HHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----CCce---EEeccC----H---HHHHHhhC
Confidence            4889999996 99999999999899999999999988876543222     2211   124332    1   22333333


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                        .+|++++++|.
T Consensus       251 --~~D~vid~~g~  261 (366)
T 1yqd_A          251 --TLDGIIDTVSA  261 (366)
T ss_dssp             --CEEEEEECCSS
T ss_pred             --CCCEEEECCCc
Confidence              69999999985

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.97  E-value=0.00013  Score=59.51  Aligned_cols=115  Identities=16%  Similarity=0.232  Sum_probs=70.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           64 SWALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+++||||+|.+|..++..|+.+|  ..|++.|++++  +....++........+..    +...       ....+.+.
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t-------~d~~~al~   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQ-------QQLEAALT   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESH-------HHHHHHHT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCC-------CCHHHHcC
Confidence            469999999999999999999998  78999998876  333334443211111111    1111       22334454


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEec
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIG  204 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~is  204 (210)
                        +.|++|++||......     .+.+   ..+..|+.+.-.+.+.+.+.   ..++.|++.|
T Consensus        76 --gaDvVi~~ag~~~~~g-----~~r~---dl~~~N~~~~~~i~~~i~~~---~p~~~viv~S  125 (326)
T 1smk_A           76 --GMDLIIVPAGVPRKPG-----MTRD---DLFKINAGIVKTLCEGIAKC---CPRAIVNLIS  125 (326)
T ss_dssp             --TCSEEEECCCCCCCSS-----CCCS---HHHHHHHHHHHHHHHHHHHH---CTTSEEEECC
T ss_pred             --CCCEEEEcCCcCCCCC-----CCHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEEC
Confidence              4889999999754311     1222   35788888777777765442   2334555543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.96  E-value=4.3e-05  Score=63.29  Aligned_cols=77  Identities=19%  Similarity=0.266  Sum_probs=54.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +++++++|+|+ ||+|++.++.+...|++|++++|++++++.+.+....     .+..   +..+    .   +.+.+..
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~---~~~~----~---~~~~~~~  228 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVEL---LYSN----S---AEIETAV  228 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEE---EECC----H---HHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-----eeEe---eeCC----H---HHHHHHH
Confidence            55799999999 9999999999999999999999999888776544321     1111   1111    1   1233333


Q ss_pred             cCCCccEEEEcCCCC
Q 045749          141 DGLEVGVLINNVGIT  155 (210)
Q Consensus       141 ~~~~id~lvnnAg~~  155 (210)
                      .  ..|++||+++..
T Consensus       229 ~--~~DvVI~~~~~~  241 (361)
T 1pjc_A          229 A--EADLLIGAVLVP  241 (361)
T ss_dssp             H--TCSEEEECCCCT
T ss_pred             c--CCCEEEECCCcC
Confidence            3  478999999864

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.95  E-value=8.7e-05  Score=60.24  Aligned_cols=116  Identities=23%  Similarity=0.280  Sum_probs=72.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEec--ChhHHHHHHHHHHhhCCC--ceeEEEEEecccCccchhhHHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL--NLILVSR--NHNKLEKISNEIQAENPN--TQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r--~~~~l~~~~~~l~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++||||+|.+|..++..|+.+|.  .+.+.|+  ++++++....++.+..+.  ...     ++....+      .+.+
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~-----~i~~~~d------~l~~   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDA-----NIYVESD------ENLR   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCC-----EEEEEET------TCGG
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCe-----EEEeCCc------chHH
Confidence            589999999999999999998884  5888999  776666555555432111  111     2221100      0111


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS  205 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS  205 (210)
                      .+.  +.|++|+.||.... +    ..+..   ..++.|+.+...+.+.+..+    .++.++++|.
T Consensus        71 al~--gaD~Vi~~Ag~~~~-~----g~~r~---dl~~~N~~i~~~i~~~i~~~----~~~~vlv~SN  123 (313)
T 1hye_A           71 IID--ESDVVIITSGVPRK-E----GMSRM---DLAKTNAKIVGKYAKKIAEI----CDTKIFVITN  123 (313)
T ss_dssp             GGT--TCSEEEECCSCCCC-T----TCCHH---HHHHHHHHHHHHHHHHHHHH----CCCEEEECSS
T ss_pred             HhC--CCCEEEECCCCCCC-C----CCcHH---HHHHHHHHHHHHHHHHHHHh----CCeEEEEecC
Confidence            233  58899999997532 2    12333   45889988888887776542    3455666554

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.94  E-value=0.0003  Score=56.75  Aligned_cols=112  Identities=10%  Similarity=0.126  Sum_probs=70.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEec--ChhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL--NLILVSR--NHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r--~~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||||+|.+|..++..|+.+|.  .+++.|+  ++++++....++.+... ...+.+.. +   +   .+       .
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~---~---~~-------a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G---G---YE-------D   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C---C---GG-------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C---C---HH-------H
Confidence            589999999999999999998875  5889999  87776655555544311 11222111 1   1   11       1


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                      +.  +.|++|+.||.... +    ..+.+   +.+..|+.+.-.+.+.+    .+.+ .+.++++|
T Consensus        68 ~~--~aDvVi~~ag~~~~-~----g~~r~---dl~~~N~~i~~~i~~~i----~~~~p~~~viv~S  119 (303)
T 1o6z_A           68 TA--GSDVVVITAGIPRQ-P----GQTRI---DLAGDNAPIMEDIQSSL----DEHNDDYISLTTS  119 (303)
T ss_dssp             GT--TCSEEEECCCCCCC-T----TCCHH---HHHHHHHHHHHHHHHHH----HTTCSCCEEEECC
T ss_pred             hC--CCCEEEEcCCCCCC-C----CCCHH---HHHHHHHHHHHHHHHHH----HHHCCCcEEEEeC
Confidence            33  58899999997532 1    12333   35788888777666664    4444 34555543

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.90  E-value=4e-05  Score=62.72  Aligned_cols=77  Identities=19%  Similarity=0.261  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+|| +|+|...++.+...|++|+.+++++++++.+.    +.  +..   ...|..++    +..+.+.+..+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~l--Ga~---~~~d~~~~----~~~~~~~~~~~  229 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----EL--GAD---LVVNPLKE----DAAKFMKEKVG  229 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HT--TCS---EEECTTTS----CHHHHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HC--CCC---EEecCCCc----cHHHHHHHHhC
Confidence            3889999999 88999999999999999999999988876543    22  222   12355433    22234443333


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                        .+|++|+++|.
T Consensus       230 --~~d~vid~~g~  240 (339)
T 1rjw_A          230 --GVHAAVVTAVS  240 (339)
T ss_dssp             --SEEEEEESSCC
T ss_pred             --CCCEEEECCCC
Confidence              69999999984

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.87  E-value=0.00012  Score=52.71  Aligned_cols=76  Identities=14%  Similarity=0.258  Sum_probs=49.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH-h
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA-I  140 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~-~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~  140 (210)
                      ++.++|.|+ +.+|..++++|.+.|++|++++++ +++.++..+..     ...+.++..|.+++    +   .+.+. .
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~----~---~l~~a~i   69 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDS----S---VLKKAGI   69 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSH----H---HHHHHTT
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCH----H---HHHHcCh
Confidence            456888886 999999999999999999999997 45554443322     12345566665544    2   22222 3


Q ss_pred             cCCCccEEEEcCC
Q 045749          141 DGLEVGVLINNVG  153 (210)
Q Consensus       141 ~~~~id~lvnnAg  153 (210)
                      .  +.|.+|.+.+
T Consensus        70 ~--~ad~vi~~~~   80 (153)
T 1id1_A           70 D--RCRAILALSD   80 (153)
T ss_dssp             T--TCSEEEECSS
T ss_pred             h--hCCEEEEecC
Confidence            3  4667776654

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.82  E-value=8.2e-05  Score=61.45  Aligned_cols=78  Identities=13%  Similarity=0.212  Sum_probs=55.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+| ++++|...++.+...|++|+++++++++++.+ +++     +...   ..| .++   .+..+++.+..+
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~---vi~-~~~---~~~~~~v~~~~~  254 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL-----GADH---GIN-RLE---EDWVERVYALTG  254 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCSE---EEE-TTT---SCHHHHHHHHHT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc-----CCCE---EEc-CCc---ccHHHHHHHHhC
Confidence            488999999 89999999988888999999999998877653 222     2211   123 222   233455555555


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      +..+|++++++|
T Consensus       255 g~g~D~vid~~g  266 (363)
T 3uog_A          255 DRGADHILEIAG  266 (363)
T ss_dssp             TCCEEEEEEETT
T ss_pred             CCCceEEEECCC
Confidence            447999999998

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.81  E-value=6.2e-05  Score=62.09  Aligned_cols=87  Identities=22%  Similarity=0.245  Sum_probs=54.0

Q ss_pred             CC-cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YG-SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~g-k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .| ++++|+||++++|...++.....|++|++++++.+++++..+.+++.  +... +  .|..+. ...+..+++.+..
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l--Ga~~-v--i~~~~~-~~~~~~~~i~~~t  239 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL--GATQ-V--ITEDQN-NSREFGPTIKEWI  239 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH--TCSE-E--EEHHHH-HCGGGHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhc--CCeE-E--EecCcc-chHHHHHHHHHHh
Confidence            37 89999999999999988877788999999987766533333333333  2211 1  233220 0012334444433


Q ss_pred             --cCCCccEEEEcCCC
Q 045749          141 --DGLEVGVLINNVGI  154 (210)
Q Consensus       141 --~~~~id~lvnnAg~  154 (210)
                        ++..+|++++++|.
T Consensus       240 ~~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          240 KQSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHHTCCEEEEEESSCH
T ss_pred             hccCCCceEEEECCCc
Confidence              22369999999873

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.80  E-value=6.5e-05  Score=59.80  Aligned_cols=49  Identities=22%  Similarity=0.292  Sum_probs=43.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQ  108 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~  108 (210)
                      .++.||+++|+|+ +|.|++++..|++.|+ +|++++|+.++.+++.+++.
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~  165 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD  165 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            4567999999998 6999999999999996 89999999999888887764

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.79  E-value=0.00011  Score=61.27  Aligned_cols=45  Identities=18%  Similarity=0.187  Sum_probs=40.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISN  105 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~  105 (210)
                      .+.|++++|+|+ |++|+++++.+...|++|++++|++++++.+.+
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~  209 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDA  209 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence            467999999998 999999999999999999999999988766543

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.78  E-value=0.00015  Score=51.01  Aligned_cols=40  Identities=23%  Similarity=0.539  Sum_probs=34.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      +..++|+|+ +.+|..+++.|.+.|++|++++|+++..++.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~   43 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKA   43 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            456889987 9999999999999999999999998776544

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.78  E-value=5.9e-05  Score=60.35  Aligned_cols=51  Identities=20%  Similarity=0.308  Sum_probs=44.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhh
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAE  110 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~  110 (210)
                      .++.+|+++|+|+ +|+|++++..|++.|+ +|++++|+.++.+++.+++...
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~  173 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY  173 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc
Confidence            3456999999998 6999999999999996 8999999999999888887543

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.76  E-value=4.5e-05  Score=61.32  Aligned_cols=42  Identities=21%  Similarity=0.283  Sum_probs=37.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|+||++|+|...++.+...|++|+.+++++++++.+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  166 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP  166 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            388999999999999999999989999999999998877654

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.75  E-value=0.0002  Score=58.83  Aligned_cols=80  Identities=20%  Similarity=0.150  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+|+ +|+|...++.+...|++|+++++++++++.+.    +.  +.. .  ..|..++.   +..+++.+..+
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~l--Ga~-~--~~~~~~~~---~~~~~i~~~~~  234 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK----NC--GAD-V--TLVVDPAK---EEESSIIERIR  234 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HT--TCS-E--EEECCTTT---SCHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH----Hh--CCC-E--EEcCcccc---cHHHHHHHHhc
Confidence            3889999997 89999999888889999999999988766442    22  222 1  13443211   22344444443


Q ss_pred             ---CCCccEEEEcCCC
Q 045749          142 ---GLEVGVLINNVGI  154 (210)
Q Consensus       142 ---~~~id~lvnnAg~  154 (210)
                         +..+|++++++|.
T Consensus       235 ~~~g~g~D~vid~~g~  250 (352)
T 1e3j_A          235 SAIGDLPNVTIDCSGN  250 (352)
T ss_dssp             HHSSSCCSEEEECSCC
T ss_pred             cccCCCCCEEEECCCC
Confidence               2368999999974

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.71  E-value=0.00025  Score=58.47  Aligned_cols=83  Identities=22%  Similarity=0.296  Sum_probs=56.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+|+ |++|...++.....|++ |+++++++++++.+. ++ .   .. +.....|   +...++..+++.+..
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-~---~~-~~~~~~~---~~~~~~~~~~v~~~t  248 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-C---PE-VVTHKVE---RLSAEESAKKIVESF  248 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-C---TT-CEEEECC---SCCHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-c---hh-ccccccc---ccchHHHHHHHHHHh
Confidence            3889999998 99999998888889997 999999988876543 33 2   11 1111111   112234445666665


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++..+|++++++|.
T Consensus       249 ~g~g~Dvvid~~g~  262 (363)
T 3m6i_A          249 GGIEPAVALECTGV  262 (363)
T ss_dssp             SSCCCSEEEECSCC
T ss_pred             CCCCCCEEEECCCC
Confidence            55579999999884

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.68  E-value=0.00015  Score=60.07  Aligned_cols=72  Identities=24%  Similarity=0.279  Sum_probs=52.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      ...|+|.|| |++|+.+|+.|++ .++|.+.+++.++++++.         .....+.+|+++.       +.+.+.+. 
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~---------~~~~~~~~d~~d~-------~~l~~~~~-   76 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK---------EFATPLKVDASNF-------DKLVEVMK-   76 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT---------TTSEEEECCTTCH-------HHHHHHHT-
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh---------ccCCcEEEecCCH-------HHHHHHHh-
Confidence            346888898 9999999999875 579999999988876542         2234456676544       34555555 


Q ss_pred             CCccEEEEcCCC
Q 045749          143 LEVGVLINNVGI  154 (210)
Q Consensus       143 ~~id~lvnnAg~  154 (210)
                       +.|++||+++.
T Consensus        77 -~~DvVi~~~p~   87 (365)
T 3abi_A           77 -EFELVIGALPG   87 (365)
T ss_dssp             -TCSEEEECCCG
T ss_pred             -CCCEEEEecCC
Confidence             47899999874

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.61  E-value=0.00013  Score=60.54  Aligned_cols=77  Identities=17%  Similarity=0.276  Sum_probs=51.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|...++.+...|++|+.++ ++++++.+    ++.  +...   ..|..++    +..+++.+. .
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~----~~l--Ga~~---v~~~~~~----~~~~~~~~~-~  247 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV----RKL--GADD---VIDYKSG----SVEEQLKSL-K  247 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH----HHT--TCSE---EEETTSS----CHHHHHHTS-C
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH----HHc--CCCE---EEECCch----HHHHHHhhc-C
Confidence            489999999999999999988888999999888 45554432    222  2221   1344332    222333322 2


Q ss_pred             CCCccEEEEcCCCC
Q 045749          142 GLEVGVLINNVGIT  155 (210)
Q Consensus       142 ~~~id~lvnnAg~~  155 (210)
                        .+|++++|+|..
T Consensus       248 --g~D~vid~~g~~  259 (375)
T 2vn8_A          248 --PFDFILDNVGGS  259 (375)
T ss_dssp             --CBSEEEESSCTT
T ss_pred             --CCCEEEECCCCh
Confidence              699999999864

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.61  E-value=7.9e-05  Score=53.23  Aligned_cols=44  Identities=14%  Similarity=0.266  Sum_probs=39.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      +++++|.|+ |++|+.+++.|.+.|++|++++|++++.++..+++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~   64 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY   64 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence            889999996 99999999999999999999999999887766654

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.60  E-value=0.00022  Score=59.23  Aligned_cols=82  Identities=17%  Similarity=0.146  Sum_probs=54.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+| ++++|...++.....| ++|+.+++++++++.+.    +.  +.. .+  .|.... ...+..+++.+..
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~----~l--Ga~-~v--i~~~~~-~~~~~~~~v~~~~  263 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE----EI--GAD-LT--LNRRET-SVEERRKAIMDIT  263 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH----HT--TCS-EE--EETTTS-CHHHHHHHHHHHT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH----Hc--CCc-EE--Eecccc-CcchHHHHHHHHh
Confidence            488999999 8999999998888899 59999999988766543    22  221 11  232210 0123334555544


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++..+|++++++|.
T Consensus       264 ~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          264 HGRGADFILEATGD  277 (380)
T ss_dssp             TTSCEEEEEECSSC
T ss_pred             CCCCCcEEEECCCC
Confidence            43369999999984

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.60  E-value=0.00031  Score=58.86  Aligned_cols=79  Identities=20%  Similarity=0.278  Sum_probs=55.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+|+ +++|...++.....|+ +|+.+++++++++.+ +++     +...   ..|..++    +..+++.+..
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~---vi~~~~~----~~~~~i~~~t  278 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL-----GADH---VIDPTKE----NFVEAVLDYT  278 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCSE---EECTTTS----CHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCCE---EEcCCCC----CHHHHHHHHh
Confidence            4889999998 8999998888888999 899999998876644 233     2211   1233222    3345666655


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++..+|+++.++|.
T Consensus       279 ~g~g~D~vid~~g~  292 (404)
T 3ip1_A          279 NGLGAKLFLEATGV  292 (404)
T ss_dssp             TTCCCSEEEECSSC
T ss_pred             CCCCCCEEEECCCC
Confidence            54469999999884

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.59  E-value=0.00018  Score=58.82  Aligned_cols=77  Identities=23%  Similarity=0.229  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+|| +|+|...++.....|+ +|+.+++++++++.+.+ + .   .     ...|..++    +..+.+.+..
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a---~-----~v~~~~~~----~~~~~~~~~~  228 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-A---D-----RLVNPLEE----DLLEVVRRVT  228 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-C---S-----EEECTTTS----CHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-H---H-----hccCcCcc----CHHHHHHHhc
Confidence            5899999999 9999999988888999 89999999877653321 1 1   1     11233322    2233444333


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                       +..+|++++++|.
T Consensus       229 -~~g~D~vid~~g~  241 (343)
T 2dq4_A          229 -GSGVEVLLEFSGN  241 (343)
T ss_dssp             -SSCEEEEEECSCC
T ss_pred             -CCCCCEEEECCCC
Confidence             2368999999874

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.56  E-value=0.00028  Score=58.14  Aligned_cols=79  Identities=22%  Similarity=0.293  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+|| +++|...++..... |++|+.+++++++++.+. ++     +...   ..|..++     ..+.+.+..
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~-----~~~~v~~~~  250 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL-----GADH---VVDARRD-----PVKQVMELT  250 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT-----TCSE---EEETTSC-----HHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh-----CCCE---EEeccch-----HHHHHHHHh
Confidence            3889999999 89999998877778 999999999988766543 22     2211   1243322     223444433


Q ss_pred             cCCCccEEEEcCCCC
Q 045749          141 DGLEVGVLINNVGIT  155 (210)
Q Consensus       141 ~~~~id~lvnnAg~~  155 (210)
                      ++..+|++++++|..
T Consensus       251 ~g~g~Dvvid~~G~~  265 (359)
T 1h2b_A          251 RGRGVNVAMDFVGSQ  265 (359)
T ss_dssp             TTCCEEEEEESSCCH
T ss_pred             CCCCCcEEEECCCCc
Confidence            333699999999853

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.54  E-value=9.3e-05  Score=60.15  Aligned_cols=39  Identities=26%  Similarity=0.373  Sum_probs=35.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      +++|+||++|+|...++.+...|++|+.+++++++++.+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  190 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL  190 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            799999999999999998888999999999998877654

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.52  E-value=0.00036  Score=55.99  Aligned_cols=65  Identities=22%  Similarity=0.411  Sum_probs=51.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCh------------------hHHHHHHHHHHhhCCCceeEEE
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNH------------------NKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~------------------~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      .++++++|+|.|+ +|+|.++++.|++.|. ++.++|.+.                  .+.+.+++.+++.+|..++..+
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~  110 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH  110 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence            3456789999977 8999999999999995 699999875                  6777788888888887777766


Q ss_pred             EEecc
Q 045749          120 EYDFS  124 (210)
Q Consensus       120 ~~D~~  124 (210)
                      ..+++
T Consensus       111 ~~~l~  115 (292)
T 3h8v_A          111 NYNIT  115 (292)
T ss_dssp             CCCTT
T ss_pred             cccCC
Confidence            54443

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.51  E-value=0.00033  Score=57.19  Aligned_cols=77  Identities=16%  Similarity=0.232  Sum_probs=53.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+|+ +|+|...++.....|++|+.+++++++++.+.    +.  +...   ..|..++    +..+.+.+..+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~l--Ga~~---~i~~~~~----~~~~~~~~~~g  231 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR----RL--GAEV---AVNARDT----DPAAWLQKEIG  231 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HT--TCSE---EEETTTS----CHHHHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----Hc--CCCE---EEeCCCc----CHHHHHHHhCC
Confidence            4889999997 89999999888889999999999988876432    22  2211   1343332    23345555333


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                        .+|+++.++|.
T Consensus       232 --~~d~vid~~g~  242 (340)
T 3s2e_A          232 --GAHGVLVTAVS  242 (340)
T ss_dssp             --SEEEEEESSCC
T ss_pred             --CCCEEEEeCCC
Confidence              68899998873

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.51  E-value=8.2e-05  Score=59.35  Aligned_cols=43  Identities=23%  Similarity=0.332  Sum_probs=37.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKI  103 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~  103 (210)
                      ++.||+++|+|+ +|.|++++..|++.|+ +|++++|+.++.+++
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            355899999997 7999999999999999 899999998775543

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.50  E-value=0.0057  Score=49.78  Aligned_cols=114  Identities=14%  Similarity=0.173  Sum_probs=73.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCC--ceeEEEEEecccCccchhhHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPN--TQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .+.+.|+|+ +.+|.++|..++..|.  .|++.|+++++++....++.+..+.  ..+...    +++          .+
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~----~~~----------~~   69 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTS----YGT----------YE   69 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEE----EEC----------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEE----eCc----------HH
Confidence            457889996 9999999999999997  8999999999888877777654221  122221    111          01


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGS  205 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS  205 (210)
                      .+.  +-|++|..||.... +    ..+..+   .++.|..-.-.+.+.    +.+. ..+.++++|-
T Consensus        70 a~~--~aDvVvi~ag~p~k-p----G~~R~d---L~~~N~~Iv~~i~~~----I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           70 DCK--DADIVCICAGANQK-P----GETRLE---LVEKNLKIFKGIVSE----VMASGFDGIFLVATN  123 (326)
T ss_dssp             GGT--TCSEEEECCSCCCC-T----TCCHHH---HHHHHHHHHHHHHHH----HHHTTCCSEEEECSS
T ss_pred             HhC--CCCEEEEecccCCC-C----CccHHH---HHHHHHHHHHHHHHH----HHHhcCCeEEEEcCC
Confidence            233  47899999997432 2    224443   566776544444444    4333 4567777664

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.50  E-value=0.0003  Score=55.23  Aligned_cols=60  Identities=28%  Similarity=0.419  Sum_probs=46.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCh-------------------hHHHHHHHHHHhhCCCceeEEE
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNH-------------------NKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~-------------------~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      ++.+++|+|.|+ +|+|.++++.|++.|. ++.++|++.                   .+.+.+.+.+++.+|..++..+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            355789999987 7899999999999997 688887642                   5677778888887777666554


Q ss_pred             E
Q 045749          120 E  120 (210)
Q Consensus       120 ~  120 (210)
                      .
T Consensus       104 ~  104 (251)
T 1zud_1          104 Q  104 (251)
T ss_dssp             C
T ss_pred             e
Confidence            3

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=97.50  E-value=0.00037  Score=57.18  Aligned_cols=79  Identities=15%  Similarity=0.140  Sum_probs=53.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+|+ +++|...++.....|+ +|+.+++++++++.+ +++     +...   ..|..++    +..+++.+..
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~---vi~~~~~----~~~~~v~~~t  231 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY-----GATD---IINYKNG----DIVEQILKAT  231 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH-----TCCE---EECGGGS----CHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh-----CCce---EEcCCCc----CHHHHHHHHc
Confidence            3889999985 8999998888878899 799999998876543 223     2211   1233322    3345565555


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++..+|++++++|.
T Consensus       232 ~g~g~D~v~d~~g~  245 (352)
T 3fpc_A          232 DGKGVDKVVIAGGD  245 (352)
T ss_dssp             TTCCEEEEEECSSC
T ss_pred             CCCCCCEEEECCCC
Confidence            54468999998875

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.49  E-value=0.00055  Score=48.58  Aligned_cols=73  Identities=12%  Similarity=0.258  Sum_probs=48.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      +.++|.|+ |.+|..+++.|.+.|++|+++++++++.++..+    .  +  ...+..|.+++    +   .+.+ .+-.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~--g--~~~i~gd~~~~----~---~l~~-a~i~   70 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R--G--VRAVLGNAANE----E---IMQL-AHLE   70 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--T--CEEEESCTTSH----H---HHHH-TTGG
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c--C--CCEEECCCCCH----H---HHHh-cCcc
Confidence            45777786 889999999999999999999999988765432    1  2  34455565544    2   1221 1111


Q ss_pred             CccEEEEcCC
Q 045749          144 EVGVLINNVG  153 (210)
Q Consensus       144 ~id~lvnnAg  153 (210)
                      +.|.+|.+.+
T Consensus        71 ~ad~vi~~~~   80 (140)
T 3fwz_A           71 CAKWLILTIP   80 (140)
T ss_dssp             GCSEEEECCS
T ss_pred             cCCEEEEECC
Confidence            5677876654

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.47  E-value=0.0038  Score=51.21  Aligned_cols=116  Identities=21%  Similarity=0.233  Sum_probs=71.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhh-CCCceeEEEEEecccCccchhhHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAE-NPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .++.+.|+|++|.+|..+|..++.+|.  +|+++|+++++++....++... ++..++.     .+.+         ..+
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~-----~t~d---------~~~   72 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLT-----FTSD---------IKE   72 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCE-----EESC---------HHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceE-----EcCC---------HHH
Confidence            467799999999999999999999984  7999999999888777777653 1111111     1111         222


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCE-EEEecc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGA-IVNIGS  205 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~-iv~isS  205 (210)
                      .+.  +-|++|.+||.... +    ..+..   +.++.|..-.-.+    .+.+.+. ..+. ++++|-
T Consensus        73 al~--dADvVvitaG~p~k-p----G~~R~---dLl~~N~~I~~~i----~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           73 ALT--DAKYIVSSGGAPRK-E----GMTRE---DLLKGNAEIAAQL----GKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             HHT--TEEEEEECCC------------CHH---HHHHHHHHHHHHH----HHHHHHHCTTCCEEEECSS
T ss_pred             HhC--CCCEEEEccCCCCC-C----CCCHH---HHHHHHHHHHHHH----HHHHHHhccCcEEEEEecC
Confidence            344  48899999997432 2    22333   3566776544444    4444443 3453 666653

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.47  E-value=0.00014  Score=60.56  Aligned_cols=79  Identities=14%  Similarity=0.252  Sum_probs=53.8

Q ss_pred             CcEEEEEc-CCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITG-ATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITG-assGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      |++++|.| |++++|...++.....|++|+.+++++++++.+.    +.  +...   ..|..++    +..+++.+..+
T Consensus       171 g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~----~l--Ga~~---~~~~~~~----~~~~~v~~~t~  237 (379)
T 3iup_A          171 GHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK----AQ--GAVH---VCNAASP----TFMQDLTEALV  237 (379)
T ss_dssp             TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH----HT--TCSC---EEETTST----THHHHHHHHHH
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----hC--CCcE---EEeCCCh----HHHHHHHHHhc
Confidence            77899987 8999999998888889999999999988776543    22  2211   1233332    23344444433


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|++++++|.
T Consensus       238 ~~g~d~v~d~~g~  250 (379)
T 3iup_A          238 STGATIAFDATGG  250 (379)
T ss_dssp             HHCCCEEEESCEE
T ss_pred             CCCceEEEECCCc
Confidence            2258999999884

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.45  E-value=0.0013  Score=54.03  Aligned_cols=81  Identities=19%  Similarity=0.212  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+|+ +++|...++.....|+ +|+++++++++++.+. +   .  +.. ..  .|... .+..+..+++.+..
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---l--Ga~-~v--i~~~~-~~~~~~~~~i~~~~  239 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-E---I--GAD-LV--LQISK-ESPQEIARKVEGQL  239 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H---T--TCS-EE--EECSS-CCHHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-H---h--CCC-EE--EcCcc-cccchHHHHHHHHh
Confidence            3889999996 8999998887778999 8999999988765432 2   2  222 11  23331 01123345555544


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      + ..+|++++++|.
T Consensus       240 ~-~g~D~vid~~g~  252 (356)
T 1pl8_A          240 G-CKPEVTIECTGA  252 (356)
T ss_dssp             T-SCCSEEEECSCC
T ss_pred             C-CCCCEEEECCCC
Confidence            4 368999999874

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.45  E-value=0.00053  Score=56.75  Aligned_cols=79  Identities=10%  Similarity=0.183  Sum_probs=52.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ..|++++|+||++++|...++.....|++|+.+. ++++++.+ ++   .  +.. .  ..|..++    +..+.+.+..
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~-~~---l--Ga~-~--vi~~~~~----~~~~~v~~~t  228 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLA-KS---R--GAE-E--VFDYRAP----NLAQTIRTYT  228 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HH---T--TCS-E--EEETTST----THHHHHHHHT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHH-HH---c--CCc-E--EEECCCc----hHHHHHHHHc
Confidence            4589999999999999999988888999998886 56665422 22   2  221 1  1233332    3334555544


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++ ++|+++.++|.
T Consensus       229 ~g-~~d~v~d~~g~  241 (371)
T 3gqv_A          229 KN-NLRYALDCITN  241 (371)
T ss_dssp             TT-CCCEEEESSCS
T ss_pred             cC-CccEEEECCCc
Confidence            44 48888888874

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.44  E-value=0.00032  Score=57.95  Aligned_cols=78  Identities=14%  Similarity=0.100  Sum_probs=50.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQ-HGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~-~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+||++++|...++.... .|++|+.+++++++++.+.    +.  +...   ..|..+     +..+.+.+. 
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~----~l--Gad~---vi~~~~-----~~~~~v~~~-  235 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK----SL--GAHH---VIDHSK-----PLAAEVAAL-  235 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH----HT--TCSE---EECTTS-----CHHHHHHTT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH----Hc--CCCE---EEeCCC-----CHHHHHHHh-
Confidence            588999999999999887765544 5899999999988766542    22  2211   123221     122344433 


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      .+..+|++++++|.
T Consensus       236 ~~~g~Dvvid~~g~  249 (363)
T 4dvj_A          236 GLGAPAFVFSTTHT  249 (363)
T ss_dssp             CSCCEEEEEECSCH
T ss_pred             cCCCceEEEECCCc
Confidence            33368888888773

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=97.44  E-value=0.00053  Score=56.69  Aligned_cols=78  Identities=19%  Similarity=0.197  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+|+ +++|...++.....|+ +|+.+++++++++.+. ++     +...   ..|..++    +..+++.+..
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~---vi~~~~~----~~~~~~~~~~  255 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL-----GATH---VINSKTQ----DPVAAIKEIT  255 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH-----TCSE---EEETTTS----CHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCCE---EecCCcc----CHHHHHHHhc
Confidence            3889999995 8999999888777899 5999999988766542 32     2211   1233322    2234455444


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++ .+|++++++|.
T Consensus       256 ~g-g~D~vid~~g~  268 (371)
T 1f8f_A          256 DG-GVNFALESTGS  268 (371)
T ss_dssp             TS-CEEEEEECSCC
T ss_pred             CC-CCcEEEECCCC
Confidence            44 68999999874

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.44  E-value=0.00014  Score=58.78  Aligned_cols=37  Identities=22%  Similarity=0.387  Sum_probs=31.7

Q ss_pred             cCCcE-EEEEcCCC-----------------h-HHHHHHHHHHHcCCeEEEEecCh
Q 045749           61 SYGSW-ALITGATD-----------------G-IGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        61 ~~gk~-vlITGass-----------------G-iG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      +.||. |+||+|+.                 | .|.++|+.++++||.|+++.+..
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            35777 99997765                 6 99999999999999999998853

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.42  E-value=0.0006  Score=56.39  Aligned_cols=80  Identities=20%  Similarity=0.174  Sum_probs=53.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+|+ +++|...++.....|+ +|+.+++++++++.+. ++     +...   ..|..+..  .+..+.+.+..
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~~--~~~~~~~~~~~  259 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-----GATD---FVNPNDHS--EPISQVLSKMT  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCCE---EECGGGCS--SCHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh-----CCce---EEeccccc--hhHHHHHHHHh
Confidence            4889999995 9999999988888999 7999999988876543 22     2211   13444311  12233444444


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++ .+|++++++|.
T Consensus       260 ~~-g~D~vid~~g~  272 (374)
T 1cdo_A          260 NG-GVDFSLECVGN  272 (374)
T ss_dssp             TS-CBSEEEECSCC
T ss_pred             CC-CCCEEEECCCC
Confidence            43 69999999984

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.40  E-value=0.00061  Score=50.45  Aligned_cols=43  Identities=16%  Similarity=0.146  Sum_probs=36.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKI  103 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~  103 (210)
                      +..++.++|.|+ |.+|..+++.|.+. |++|+++++++++.++.
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~   79 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQH   79 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHH
Confidence            345667888885 99999999999999 99999999998876654

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.40  E-value=0.00053  Score=55.47  Aligned_cols=41  Identities=24%  Similarity=0.421  Sum_probs=36.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      |+ ++|+||++++|...++.....|++|+.+++++++++.+.
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~  188 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK  188 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            56 999999999999999888889999999999988876553

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.40  E-value=0.0012  Score=53.92  Aligned_cols=62  Identities=18%  Similarity=0.205  Sum_probs=49.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCh-------------------hHHHHHHHHHHhhCCCceeEEE
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNH-------------------NKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~-------------------~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      ++++++|+|.|+ ||+|.++++.|++.|. +++++|++.                   .+.+.+++.+++.+|..++..+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            467889999987 7999999999999996 588888753                   5677788888888887777666


Q ss_pred             EEe
Q 045749          120 EYD  122 (210)
Q Consensus       120 ~~D  122 (210)
                      ..+
T Consensus       110 ~~~  112 (340)
T 3rui_A          110 KLS  112 (340)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            543

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.39  E-value=0.00063  Score=56.28  Aligned_cols=80  Identities=19%  Similarity=0.184  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+|+ +++|...++.....|+ +|+.+++++++++.+. ++     +...   ..|..+..  ++..+.+.+..
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~~--~~~~~~~~~~~  258 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV-----GATE---CVNPQDYK--KPIQEVLTEMS  258 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCSE---EECGGGCS--SCHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCce---Eecccccc--hhHHHHHHHHh
Confidence            4889999995 9999999988888999 7999999988876542 22     2211   13444310  12233444433


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++ .+|++++++|.
T Consensus       259 ~~-g~D~vid~~g~  271 (374)
T 2jhf_A          259 NG-GVDFSFEVIGR  271 (374)
T ss_dssp             TS-CBSEEEECSCC
T ss_pred             CC-CCcEEEECCCC
Confidence            33 68999999884

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.38  E-value=0.0037  Score=51.09  Aligned_cols=115  Identities=18%  Similarity=0.251  Sum_probs=71.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--e-----EEEEecCh--hHHHHHHHHHHhh-CCCceeEEEEEecccCccchhhH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL--N-----LILVSRNH--NKLEKISNEIQAE-NPNTQINIVEYDFSCDVVSAGNI  133 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~--~-----Vi~~~r~~--~~l~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~  133 (210)
                      ..+.||||+|.+|..++..|+.+|.  .     +++.|+++  ++++....++.+. .+.  ..  ....+++       
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~--~~--~~~~~~~-------   72 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL--LK--DVIATDK-------   72 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT--EE--EEEEESC-------
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc--cC--CEEEcCC-------
Confidence            4689999999999999999998875  5     99999975  4667777777663 221  11  1111111       


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CC-EEEEecc
Q 045749          134 KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KG-AIVNIGS  205 (210)
Q Consensus       134 ~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g-~iv~isS  205 (210)
                        ..+.+.  +.|++|..||.... +    ..+.+   +.++.|....-.+.+.    +.+.. ++ .++++|-
T Consensus        73 --~~~~~~--daDvVvitAg~prk-p----G~tR~---dll~~N~~i~~~i~~~----i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           73 --EEIAFK--DLDVAILVGSMPRR-D----GMERK---DLLKANVKIFKCQGAA----LDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             --HHHHTT--TCSEEEECCSCCCC-T----TCCTT---TTHHHHHHHHHHHHHH----HHHHSCTTCEEEECSS
T ss_pred             --cHHHhC--CCCEEEEeCCCCCC-C----CCCHH---HHHHHHHHHHHHHHHH----HHHhCCCCeEEEEcCC
Confidence              223344  57899999987532 2    12332   3577776665544444    44444 45 5777664

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.37  E-value=0.00075  Score=55.77  Aligned_cols=80  Identities=21%  Similarity=0.181  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+|+ +++|...++.....|+ +|+.+++++++++.+. ++     +...   ..|..+.  ..+..+.+.+..
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~--~~~~~~~v~~~~  257 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF-----GATE---CINPQDF--SKPIQEVLIEMT  257 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH-----TCSE---EECGGGC--SSCHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCce---Eeccccc--cccHHHHHHHHh
Confidence            4889999996 9999999988888899 7999999988876543 33     2211   1344331  012234444444


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++ .+|++++++|.
T Consensus       258 ~~-g~D~vid~~g~  270 (373)
T 2fzw_A          258 DG-GVDYSFECIGN  270 (373)
T ss_dssp             TS-CBSEEEECSCC
T ss_pred             CC-CCCEEEECCCc
Confidence            43 69999999874

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.37  E-value=0.00073  Score=55.93  Aligned_cols=80  Identities=16%  Similarity=0.107  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++|+|+|+ +++|...++.....|+ +|+.+++++++++.+. ++     +...   ..|..+.  .++..+.+.+..
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~---vi~~~~~--~~~~~~~v~~~~  262 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL-----GATD---CLNPREL--DKPVQDVITELT  262 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCSE---EECGGGC--SSCHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCcE---EEccccc--cchHHHHHHHHh
Confidence            4889999996 8999999888888999 7999999988876542 22     2211   1344331  012234444444


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++ .+|++++++|.
T Consensus       263 ~~-g~Dvvid~~G~  275 (376)
T 1e3i_A          263 AG-GVDYSLDCAGT  275 (376)
T ss_dssp             TS-CBSEEEESSCC
T ss_pred             CC-CccEEEECCCC
Confidence            44 69999999984

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=97.36  E-value=0.0014  Score=54.69  Aligned_cols=80  Identities=21%  Similarity=0.280  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|.|+ +++|...++.....|+ +|+.+++++++++.+    ++.  +.  .  ..|..+++ .  ..+++.+..
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~l--Ga--~--~i~~~~~~-~--~~~~~~~~~  250 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL----SDA--GF--E--TIDLRNSA-P--LRDQIDQIL  250 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----HTT--TC--E--EEETTSSS-C--HHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHc--CC--c--EEcCCCcc-h--HHHHHHHHh
Confidence            3889999996 9999998887777899 899999998876543    222  32  2  23544331 1  123444444


Q ss_pred             cCCCccEEEEcCCCC
Q 045749          141 DGLEVGVLINNVGIT  155 (210)
Q Consensus       141 ~~~~id~lvnnAg~~  155 (210)
                      ++..+|+++.++|..
T Consensus       251 ~g~g~Dvvid~~g~~  265 (398)
T 2dph_A          251 GKPEVDCGVDAVGFE  265 (398)
T ss_dssp             SSSCEEEEEECSCTT
T ss_pred             CCCCCCEEEECCCCc
Confidence            433699999999853

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.36  E-value=0.00043  Score=57.37  Aligned_cols=80  Identities=20%  Similarity=0.133  Sum_probs=54.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++|+|+|+ +++|...++.....|+ +|+.+++++++++.+    ++.  +...   ..|..++  ..+..+.+.+..
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a----~~l--Ga~~---vi~~~~~--~~~~~~~i~~~~  260 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA----KKF--GVNE---FVNPKDH--DKPIQEVIVDLT  260 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH----HTT--TCCE---EECGGGC--SSCHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHc--CCcE---EEccccC--chhHHHHHHHhc
Confidence            4889999998 9999999888888899 799999998887643    222  2211   1344321  122334555555


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++ .+|+++.++|.
T Consensus       261 ~g-g~D~vid~~g~  273 (378)
T 3uko_A          261 DG-GVDYSFECIGN  273 (378)
T ss_dssp             TS-CBSEEEECSCC
T ss_pred             CC-CCCEEEECCCC
Confidence            54 79999999885

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.36  E-value=0.00056  Score=56.62  Aligned_cols=78  Identities=27%  Similarity=0.314  Sum_probs=51.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH--
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM--  138 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--  138 (210)
                      .|++++|+|+ |++|...++.....|+ +|+++++++++++.+ +++     +...   ..|..++    +..+.+.+  
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~----~~~~~i~~~~  247 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEV-----GATA---TVDPSAG----DVVEAIAGPV  247 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCSE---EECTTSS----CHHHHHHSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCCE---EECCCCc----CHHHHHHhhh
Confidence            3889999998 8999998888888999 799999998876533 233     2211   1233322    22334443  


Q ss_pred             -HhcCCCccEEEEcCCC
Q 045749          139 -AIDGLEVGVLINNVGI  154 (210)
Q Consensus       139 -~~~~~~id~lvnnAg~  154 (210)
                       ..++ .+|++++++|.
T Consensus       248 ~~~~g-g~Dvvid~~G~  263 (370)
T 4ej6_A          248 GLVPG-GVDVVIECAGV  263 (370)
T ss_dssp             SSSTT-CEEEEEECSCC
T ss_pred             hccCC-CCCEEEECCCC
Confidence             2223 68999998873

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.35  E-value=0.0014  Score=53.59  Aligned_cols=41  Identities=12%  Similarity=0.209  Sum_probs=36.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQH--GLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~--G~~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|+|| +++|...++.....  |++|+.+++++++++.+
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~  212 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA  212 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH
Confidence            4899999999 89999998888788  99999999998877654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=97.35  E-value=0.0011  Score=55.34  Aligned_cols=80  Identities=24%  Similarity=0.248  Sum_probs=54.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++|+|.|+ +++|...++.....|+ +|+.+++++++++.+. +   .  +..    ..|.+++.   ...+++.+..
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~---l--Ga~----~i~~~~~~---~~~~~v~~~t  250 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-A---Q--GFE----IADLSLDT---PLHEQIAALL  250 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H---T--TCE----EEETTSSS---CHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-H---c--CCc----EEccCCcc---hHHHHHHHHh
Confidence            3889999995 9999998887777899 6899999988776542 2   2  332    13444331   1234555544


Q ss_pred             cCCCccEEEEcCCCC
Q 045749          141 DGLEVGVLINNVGIT  155 (210)
Q Consensus       141 ~~~~id~lvnnAg~~  155 (210)
                      ++..+|+++.++|..
T Consensus       251 ~g~g~Dvvid~~G~~  265 (398)
T 1kol_A          251 GEPEVDCAVDAVGFE  265 (398)
T ss_dssp             SSSCEEEEEECCCTT
T ss_pred             CCCCCCEEEECCCCc
Confidence            443699999999853

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.34  E-value=0.0067  Score=49.48  Aligned_cols=118  Identities=16%  Similarity=0.155  Sum_probs=74.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      +...+.+.|+|+ +++|..+|..++.+|.  .|++.|+++++++....++.+..+ .......   .+.+      .   
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~---~~~d------~---   82 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIV---SSKD------Y---   82 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEE---ECSS------G---
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEE---EcCC------H---
Confidence            345678899997 8999999999999997  799999999988888888875311 0011111   1111      1   


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh-CCCCEEEEecc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR-RKKGAIVNIGS  205 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~-~~~g~iv~isS  205 (210)
                       +.+.  +-|++|..||.... +    ..+.++   .++.|..=.-.+.+.    +.+ ...+.++++|-
T Consensus        83 -~~~~--~aDiVvi~aG~~~k-p----G~tR~d---L~~~N~~I~~~i~~~----i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           83 -SVTA--NSKLVIITAGARQQ-E----GESRLN---LVQRNVNIFKFIIPN----VVKYSPQCKLLIVSN  137 (331)
T ss_dssp             -GGGT--TEEEEEECCSCCCC-T----TCCGGG---GHHHHHHHHHHHHHH----HHHHCTTCEEEECSS
T ss_pred             -HHhC--CCCEEEEccCCCCC-C----CccHHH---HHHHHHHHHHHHHHH----HHHHCCCeEEEEecC
Confidence             1233  58899999997543 2    223332   566665444444444    433 34567777764

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.32  E-value=0.0077  Score=48.71  Aligned_cols=115  Identities=14%  Similarity=0.171  Sum_probs=67.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           65 WALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .+.|+||+|.+|..++..|+.+|  ..|++.|+++  .+....++.+.....++....  -++         ...+.+. 
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~--~t~---------d~~~a~~-   67 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL--GPE---------QLPDCLK-   67 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE--SGG---------GHHHHHT-
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec--CCC---------CHHHHhC-
Confidence            47899999999999999999988  6799999987  333444553321111111100  001         1222344 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS  205 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS  205 (210)
                       +.|++|+.||.... +    ..+..+   .+..|....-.+.+.+.++   ...+.++++|-
T Consensus        68 -~aDvVvi~ag~~~~-~----g~~r~d---l~~~n~~i~~~i~~~i~~~---~p~a~viv~sN  118 (314)
T 1mld_A           68 -GCDVVVIPAGVPRK-P----GMTRDD---LFNTNATIVATLTAACAQH---CPDAMICIISN  118 (314)
T ss_dssp             -TCSEEEECCSCCCC-T----TCCGGG---GHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred             -CCCEEEECCCcCCC-C----CCcHHH---HHHHHHHHHHHHHHHHHhh---CCCeEEEEECC
Confidence             47899999997543 1    112222   3566666555555554332   24578887653

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.29  E-value=0.0033  Score=51.19  Aligned_cols=115  Identities=14%  Similarity=0.234  Sum_probs=66.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCC-ceeEEEEEecccCccchhhHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPN-TQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .++.+.|+|+ +++|.++|..++..|.  .+++.|+++++++....++.+..+. ..+...    +++          .+
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~----~~~----------~~   72 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY----SAE----------YS   72 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE----ECC----------GG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE----ECc----------HH
Confidence            4667899996 9999999999999987  7999999999888877777654221 111111    111          11


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGS  205 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS  205 (210)
                      .+.  +-|++|..||.... +    ..+.+   +.++.|..-    .+...+.+.+. ..+.++++|-
T Consensus        73 a~~--~aDiVvi~ag~~~k-p----G~tR~---dL~~~N~~I----~~~i~~~i~~~~p~a~ilvvtN  126 (326)
T 3vku_A           73 DAK--DADLVVITAGAPQK-P----GETRL---DLVNKNLKI----LKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             GGT--TCSEEEECCCCC------------------------C----HHHHHHHHHTTTCCSEEEECSS
T ss_pred             Hhc--CCCEEEECCCCCCC-C----CchHH---HHHHHHHHH----HHHHHHHHHhcCCceEEEEccC
Confidence            233  57899999997432 2    11222   356666543    34444444443 3566776653

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.29  E-value=0.00025  Score=56.73  Aligned_cols=45  Identities=20%  Similarity=0.330  Sum_probs=39.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKIS  104 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~  104 (210)
                      .+..+|.++|.|+ +|.|++++..|.+.|+ +|++++|+.++.+++.
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            3456999999997 6999999999999998 8999999998876654

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.26  E-value=0.00097  Score=55.12  Aligned_cols=80  Identities=19%  Similarity=0.161  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++|+|+|+ +++|...++.....|+ +|+.+++++++++.+. ++     +...   ..|..+.  ..+..+.+.+..
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~---vi~~~~~--~~~~~~~i~~~t  258 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GATE---CLNPKDY--DKPIYEVICEKT  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCSE---EECGGGC--SSCHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCcE---EEecccc--cchHHHHHHHHh
Confidence            4889999995 8999998888778899 7999999988876543 22     2211   1343321  112234444444


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++ .+|++++++|.
T Consensus       259 ~g-g~Dvvid~~g~  271 (373)
T 1p0f_A          259 NG-GVDYAVECAGR  271 (373)
T ss_dssp             TS-CBSEEEECSCC
T ss_pred             CC-CCCEEEECCCC
Confidence            43 69999999874

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.23  E-value=0.0011  Score=54.33  Aligned_cols=41  Identities=20%  Similarity=0.308  Sum_probs=35.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|+|+ +++|...++.....|++|+++++++++++.+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  216 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA  216 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            3889999997 8999999888888999999999998887644

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.22  E-value=0.0013  Score=50.10  Aligned_cols=39  Identities=10%  Similarity=0.304  Sum_probs=34.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      .++|.|+ +.+|..+|++|.++|++|+++++++++.++..
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~   40 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFA   40 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            4789996 89999999999999999999999998876654

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=97.22  E-value=0.0013  Score=57.64  Aligned_cols=63  Identities=17%  Similarity=0.207  Sum_probs=51.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCh-------------------hHHHHHHHHHHhhCCCceeEEE
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNH-------------------NKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~-------------------~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      +++++.|+|.|+ ||+|.++|+.|++.|. +++++|++.                   .+.+.+++.+++.+|..++..+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            467889999987 7999999999999996 689998863                   5677788888888888777766


Q ss_pred             EEec
Q 045749          120 EYDF  123 (210)
Q Consensus       120 ~~D~  123 (210)
                      ..++
T Consensus       402 ~~~I  405 (615)
T 4gsl_A          402 KLSI  405 (615)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            5433

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.21  E-value=0.022  Score=46.66  Aligned_cols=118  Identities=20%  Similarity=0.241  Sum_probs=72.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCh--hHHHHHHHHHHhhCCCceeEEEEEecccCccchh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-------NLILVSRNH--NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAG  131 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-------~Vi~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~  131 (210)
                      ...-+|.|+||+++||..++..++....       .+.+.|.++  +.++...-++............   .+.+     
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~---~~~~-----   93 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVV---VTAD-----   93 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEE---EESC-----
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEE---EcCC-----
Confidence            3356899999999999999999987643       689999876  3456666667653211111111   2222     


Q ss_pred             hHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CC-CEEEEec
Q 045749          132 NIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KK-GAIVNIG  204 (210)
Q Consensus       132 ~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~-g~iv~is  204 (210)
                          ..+.+.  +-|++|-.||.... +    .++.+|   .++.|..    +.+...+.+.+. .+ ..|+.+|
T Consensus        94 ----~~~a~~--~advVvi~aG~prk-p----GmtR~D---Ll~~Na~----I~~~~~~~i~~~a~~~~~vlvvs  150 (345)
T 4h7p_A           94 ----PRVAFD--GVAIAIMCGAFPRK-A----GMERKD---LLEMNAR----IFKEQGEAIAAVAASDCRVVVVG  150 (345)
T ss_dssp             ----HHHHTT--TCSEEEECCCCCCC-T----TCCHHH---HHHHHHH----HHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----hHHHhC--CCCEEEECCCCCCC-C----CCCHHH---HHHHhHH----HHHHHHHHHHhhccCceEEEEeC
Confidence                122344  57899999997543 2    346665   5777754    445555555543 23 4455554

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.20  E-value=0.00063  Score=53.95  Aligned_cols=43  Identities=33%  Similarity=0.474  Sum_probs=39.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      +|.++|.|+ +|.|++++..|++.|.+|++++|+.++.+++. ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            889999997 89999999999999999999999999988776 44

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=97.19  E-value=0.0012  Score=53.89  Aligned_cols=78  Identities=21%  Similarity=0.261  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+|+ +++|...++..... |++|+.+++++++++.+.    +.  +... .  .|..+     +..+++.+..
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~----~l--Ga~~-~--i~~~~-----~~~~~v~~~t  235 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR----EV--GADA-A--VKSGA-----GAADAIRELT  235 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH----HT--TCSE-E--EECST-----THHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----Hc--CCCE-E--EcCCC-----cHHHHHHHHh
Confidence            3889999998 99999887766566 789999999988776442    22  2221 1  12211     2345555555


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++..+|+++.++|.
T Consensus       236 ~g~g~d~v~d~~G~  249 (345)
T 3jv7_A          236 GGQGATAVFDFVGA  249 (345)
T ss_dssp             GGGCEEEEEESSCC
T ss_pred             CCCCCeEEEECCCC
Confidence            44468999998884

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.18  E-value=0.0006  Score=56.12  Aligned_cols=42  Identities=26%  Similarity=0.236  Sum_probs=36.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      .|++++|+|| +++|...++.+...|++|+.+++++++++.+.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~  220 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM  220 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            3889999999 99999998888889999999999988876543

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=97.16  E-value=0.0016  Score=53.15  Aligned_cols=79  Identities=23%  Similarity=0.301  Sum_probs=49.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|.|| +|+|...+.++... |++|+.+++++++++...    +.  +...   ..|..++    +..+++.+..
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~----~~--Ga~~---~i~~~~~----~~~~~v~~~t  228 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK----KI--GADV---TINSGDV----NPVDEIKKIT  228 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH----HT--TCSE---EEEC-CC----CHHHHHHHHT
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh----hc--CCeE---EEeCCCC----CHHHHhhhhc
Confidence            3889999987 78888777777655 789999999988765332    22  2211   1233332    2344555555


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++..+|.++.++|.
T Consensus       229 ~g~g~d~~~~~~~~  242 (348)
T 4eez_A          229 GGLGVQSAIVCAVA  242 (348)
T ss_dssp             TSSCEEEEEECCSC
T ss_pred             CCCCceEEEEeccC
Confidence            54457777776653

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.16  E-value=0.00096  Score=50.50  Aligned_cols=43  Identities=30%  Similarity=0.434  Sum_probs=37.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      ++.|+||++.+|.++++.|++.|++|++++|++++.++..++.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   44 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            4788999999999999999999999999999988877665543

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.16  E-value=0.022  Score=45.67  Aligned_cols=113  Identities=12%  Similarity=0.135  Sum_probs=69.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCC--CceeEEEEEecccCccchhhHHHHHHHh
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+.|+|+ +.+|.+++..|+..|.  +|++.|+++++++....++.+..+  .....+.   .+++   .       +.+
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~---~t~d---~-------~a~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIV---GGAD---Y-------SLL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEE---EESC---G-------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEE---EeCC---H-------HHh
Confidence            4778899 9999999999999997  899999999887755444443210  1111111   1111   1       122


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGS  205 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS  205 (210)
                      .  +-|++|..||.... +    ..+..+   .++.|.    ...+...+.+.+.. .+.++++|-
T Consensus        68 ~--~aDiVViaag~~~k-p----G~~R~d---l~~~N~----~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           68 K--GSEIIVVTAGLARK-P----GMTRLD---LAHKNA----GIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             T--TCSEEEECCCCCCC-S----SCCHHH---HHHHHH----HHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             C--CCCEEEECCCCCCC-C----CCcHHH---HHHHHH----HHHHHHHHHHHhhCCCeEEEEeCC
Confidence            3  47899999997532 2    234443   466664    34455555555543 566776663

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.16  E-value=0.0078  Score=48.75  Aligned_cols=116  Identities=18%  Similarity=0.196  Sum_probs=70.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC--hhHHHHHHHHHHhhC----CCceeEEEEEecccCccchhhH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN--HNKLEKISNEIQAEN----PNTQINIVEYDFSCDVVSAGNI  133 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~--~~~l~~~~~~l~~~~----~~~~~~~~~~D~~~~~~~~~~~  133 (210)
                      .+.+.+.|.|+ +.+|..+|..++..|. +|++.|++  +++.+....++.+..    ...++..     +++       
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-----t~d-------   72 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-----TSD-------   72 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-----ESC-------
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-----cCC-------
Confidence            34567889997 9999999999999999 99999999  566655555554321    0111111     111       


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecc
Q 045749          134 KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS  205 (210)
Q Consensus       134 ~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS  205 (210)
                         .+.+.  +-|++|.+||.... +    ..+.++   .++.|..-.-.+.+.+.++   ...+.++++|-
T Consensus        73 ---~~a~~--~aDvVIiaag~p~k-p----g~~R~d---l~~~N~~i~~~i~~~i~~~---~p~a~vlvvsN  128 (315)
T 3tl2_A           73 ---YADTA--DSDVVVITAGIARK-P----GMSRDD---LVATNSKIMKSITRDIAKH---SPNAIIVVLTN  128 (315)
T ss_dssp             ---GGGGT--TCSEEEECCSCCCC-T----TCCHHH---HHHHHHHHHHHHHHHHHHH---CTTCEEEECCS
T ss_pred             ---HHHhC--CCCEEEEeCCCCCC-C----CCCHHH---HHHHHHHHHHHHHHHHHHh---CCCeEEEECCC
Confidence               01233  58899999997533 2    234443   5666765444444443322   34567777663

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.14  E-value=0.001  Score=54.74  Aligned_cols=42  Identities=21%  Similarity=0.245  Sum_probs=35.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      .|++++|+|+ +++|...++.....|++|+++++++++++.+.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~  221 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEAL  221 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Confidence            4889999995 99999999888888999999999988765543

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.12  E-value=0.0014  Score=53.08  Aligned_cols=35  Identities=23%  Similarity=0.365  Sum_probs=31.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      .|++++|+||++++|...++.+...|++|+.++++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~  186 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK  186 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc
Confidence            38899999999999999999988999999988854

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.09  E-value=0.0009  Score=54.99  Aligned_cols=75  Identities=17%  Similarity=0.240  Sum_probs=49.5

Q ss_pred             CCcEEEEEcCCChHHHHH-HHHH-HHcCCe-EEEEecChh---HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           62 YGSWALITGATDGIGKAF-AHQL-AQHGLN-LILVSRNHN---KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~-a~~l-~~~G~~-Vi~~~r~~~---~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      .+++++|+|| +++|... ++.. ...|++ |+.++++++   +++.+. ++     +..  .+  |..++ +..   + 
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~l-----Ga~--~v--~~~~~-~~~---~-  235 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-EL-----DAT--YV--DSRQT-PVE---D-  235 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-HT-----TCE--EE--ETTTS-CGG---G-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-Hc-----CCc--cc--CCCcc-CHH---H-
Confidence            3489999999 9999998 6655 567998 999999887   665432 22     221  12  44432 222   2 


Q ss_pred             HHHHhcCCCccEEEEcCCC
Q 045749          136 IEMAIDGLEVGVLINNVGI  154 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~  154 (210)
                      +.+. .+ .+|++++++|.
T Consensus       236 i~~~-~g-g~Dvvid~~g~  252 (357)
T 2b5w_A          236 VPDV-YE-QMDFIYEATGF  252 (357)
T ss_dssp             HHHH-SC-CEEEEEECSCC
T ss_pred             HHHh-CC-CCCEEEECCCC
Confidence            3333 33 68999999874

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.08  E-value=0.0008  Score=48.50  Aligned_cols=42  Identities=19%  Similarity=0.418  Sum_probs=36.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      +..++.++|.|+ |.+|..+++.|.+.|++|++++|++++.+.
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~   57 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHR   57 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGG
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence            345788999986 999999999999999999999999877543

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.06  E-value=0.0015  Score=54.08  Aligned_cols=42  Identities=17%  Similarity=0.211  Sum_probs=36.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      .|++++|+|+ +++|...++.....|++|+++++++++++.+.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~  235 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK  235 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            3889999998 89999999888889999999999988876543

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.00  E-value=0.017  Score=46.93  Aligned_cols=113  Identities=18%  Similarity=0.269  Sum_probs=69.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhC----CCceeEEEEEecccCccchhhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAEN----PNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+.+.|.|| +.+|.+++..++..|. +|++.|+++++++....++.+..    ...++.     .+++         . 
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-----~t~d---------~-   70 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFT-----GAND---------Y-   70 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE-----EESS---------G-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEE-----EeCC---------H-
Confidence            557889998 9999999999999998 99999999988776666665431    011211     1122         0 


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGS  205 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS  205 (210)
                      +.+.  +-|++|..||.... +    ..+..   +.++.|..-    .+...+.+.+. ..+.++++|-
T Consensus        71 ~a~~--~aDiVIiaag~p~k-~----G~~R~---dl~~~N~~i----~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           71 AAIE--GADVVIVTAGVPRK-P----GMSRD---DLLGINLKV----MEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             GGGT--TCSEEEECCSCCCC----------C---HHHHHHHHH----HHHHHHHHHHHCTTCEEEECCS
T ss_pred             HHHC--CCCEEEEccCcCCC-C----CCCHH---HHHHhhHHH----HHHHHHHHHHHCCCeEEEecCC
Confidence            1233  47899999997532 2    11222   245556543    44444444443 4567777664

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=97.00  E-value=0.0027  Score=55.55  Aligned_cols=63  Identities=17%  Similarity=0.186  Sum_probs=50.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEE
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINI  118 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~  118 (210)
                      .++.++.|+|.|+ ||+|.++|+.|++.|. ++.++|.+                   ..+.+.+++.+++.+|..++..
T Consensus       323 ~kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~  401 (598)
T 3vh1_A          323 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATG  401 (598)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEE
Confidence            4566889999977 7999999999999997 68899764                   2577888888888888777766


Q ss_pred             EEEe
Q 045749          119 VEYD  122 (210)
Q Consensus       119 ~~~D  122 (210)
                      +..+
T Consensus       402 ~~~~  405 (598)
T 3vh1_A          402 VKLS  405 (598)
T ss_dssp             ECCC
T ss_pred             Eecc
Confidence            6543

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.00  E-value=0.0019  Score=53.22  Aligned_cols=61  Identities=28%  Similarity=0.459  Sum_probs=48.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCh-------------------hHHHHHHHHHHhhCCCceeEEE
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNH-------------------NKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~-------------------~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      ++.+++|+|.|+ +|+|.++++.|++.|. ++.++|++.                   .+.+.+++.+.+.+|..++..+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            455788999987 8999999999999997 699998762                   3667777888888877776665


Q ss_pred             EE
Q 045749          120 EY  121 (210)
Q Consensus       120 ~~  121 (210)
                      ..
T Consensus       194 ~~  195 (353)
T 3h5n_A          194 AL  195 (353)
T ss_dssp             EC
T ss_pred             ec
Confidence            43

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.93  E-value=0.00097  Score=54.08  Aligned_cols=41  Identities=24%  Similarity=0.434  Sum_probs=35.9

Q ss_pred             Cc-EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           63 GS-WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        63 gk-~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      |+ +++|+||++|+|...++.+...|++|+.+++++++++.+
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            44 799999999999999998888999999999998776654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.92  E-value=0.002  Score=54.08  Aligned_cols=46  Identities=20%  Similarity=0.433  Sum_probs=40.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l  107 (210)
                      ..|++++|.|+ |++|+.+++.+...|+ +|++++|+.+++++..+++
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~  211 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL  211 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            46999999998 9999999999999999 8999999988876655544

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.89  E-value=0.0014  Score=53.79  Aligned_cols=37  Identities=27%  Similarity=0.382  Sum_probs=31.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~   98 (210)
                      .|++++|+||++++|...++.....|++++++.+..+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            4889999999999999988877778999887776543

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.86  E-value=0.0028  Score=52.42  Aligned_cols=47  Identities=19%  Similarity=0.277  Sum_probs=41.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      ++.||+++|.|+ +.+|..+|+.|.+.|++|++.|++.+++++..++.
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            466999999987 78999999999999999999999998887776654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.83  E-value=0.0069  Score=50.27  Aligned_cols=43  Identities=14%  Similarity=0.037  Sum_probs=38.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      ..+++++|.|+ +.+|...++.+...|++|++.+|+.++++.+.
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  224 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR  224 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            46789999998 79999999999999999999999998877654

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.81  E-value=0.026  Score=45.92  Aligned_cols=116  Identities=15%  Similarity=0.116  Sum_probs=71.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCC-ceeEEEEEecccCccchhhHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPN-TQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ..+.+.|+|+ |.+|..+|..++.+|.  .|++.|+++++++....++.+..+. .......   +.+         .. 
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~---t~d---------~~-   85 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVS---GKD---------YS-   85 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEE---ESS---------SC-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEE---cCC---------HH-
Confidence            3567889998 9999999999999997  7999999999888877777653110 0111111   111         00 


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh-CCCCEEEEecc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR-RKKGAIVNIGS  205 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~-~~~g~iv~isS  205 (210)
                      .+.  +-|++|..||.... ++    .+.+   +.+..|..-    .+...+.+.+ ...+.++++|-
T Consensus        86 ~~~--daDiVIitaG~p~k-pG----~tR~---dll~~N~~I----~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           86 VSA--GSKLVVITAGARQQ-EG----ESRL---NLVQRNVNI----FKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             SCS--SCSEEEECCSCCCC-SS----CCTT---GGGHHHHHH----HHHHHHHHHHHCTTCEEEECSS
T ss_pred             HhC--CCCEEEEeCCCCCC-CC----CCHH---HHHHhhHHH----HHHHHHHHHhhCCCceEEeCCC
Confidence            122  57899999997543 21    2222   245555433    3444444433 34566777663

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.79  E-value=0.054  Score=43.91  Aligned_cols=115  Identities=15%  Similarity=0.271  Sum_probs=69.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCC--CceeEEEEEecccCccchhhHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+.+.|+|+ +.+|.+++..++..|. +|++.|+++++++....++.+..+  .....+..   +++          .+.
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~---t~d----------~~a   70 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRG---TND----------YKD   70 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE---ESC----------GGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEE---cCC----------HHH
Confidence            356788885 9999999999999887 999999999888776666654210  01111110   111          012


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGS  205 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS  205 (210)
                      +.  +-|++|+.||.... +    ..+..+   .++.|..-.-.+.    +.+.+. ..+.++++|-
T Consensus        71 ~~--~aDvVIi~ag~p~k-~----G~~R~d---l~~~N~~i~~~i~----~~i~~~~p~a~vivvtN  123 (321)
T 3p7m_A           71 LE--NSDVVIVTAGVPRK-P----GMSRDD---LLGINIKVMQTVG----EGIKHNCPNAFVICITN  123 (321)
T ss_dssp             GT--TCSEEEECCSCCCC-T----TCCHHH---HHHHHHHHHHHHH----HHHHHHCTTCEEEECCS
T ss_pred             HC--CCCEEEEcCCcCCC-C----CCCHHH---HHHHhHHHHHHHH----HHHHHHCCCcEEEEecC
Confidence            33  47899999997533 2    224443   4556654444444    444433 4567777653

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.76  E-value=0.0018  Score=51.59  Aligned_cols=44  Identities=23%  Similarity=0.326  Sum_probs=38.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      .++.||.++|.|+|+-.|+.+|..|.++|++|+++.++...+++
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~  199 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSL  199 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence            45679999999999999999999999999999999987666553

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.74  E-value=0.041  Score=44.07  Aligned_cols=111  Identities=12%  Similarity=0.166  Sum_probs=70.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCC--CceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +.|.|| +++|..+|..+..+|.  ++++.|.++++.+..+.++.+..+  +.......   +++.      +    .+.
T Consensus         3 V~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~---~~d~------~----~~~   68 (294)
T 2x0j_A            3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG---GADY------S----LLK   68 (294)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEE---ESCG------G----GGT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEec---CCCH------H----HhC
Confidence            667785 9999999999988874  599999999888777777765311  11111111   1221      1    123


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                        +-|++|..||.... +    .++.+|   .++.|..    +.+...+.+.+.. ++.++.+|
T Consensus        69 --~aDvVvitAG~prk-p----GmtR~d---Ll~~Na~----I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           69 --GSEIIVVTAGLARK-P----GMTRLD---LAHKNAG----IIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             --TCSEEEECCCCCCC-S----SSCHHH---HHHHHHH----HHHHHHHHHHTTSTTCEEEECS
T ss_pred             --CCCEEEEecCCCCC-C----CCchHH---HHHHHHH----HHHHHHHHHHhcCCceEEEEec
Confidence              47899999997643 3    345555   5777754    5555556555544 45566555

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.73  E-value=0.0062  Score=50.96  Aligned_cols=43  Identities=12%  Similarity=0.057  Sum_probs=38.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      +.+.+|+|.|+ +.+|...++.+...|++|++.|++.++++.+.
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            45789999999 79999999999999999999999998876654

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.73  E-value=0.017  Score=46.97  Aligned_cols=45  Identities=16%  Similarity=0.150  Sum_probs=37.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQ  108 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~  108 (210)
                      ...+.|.|| |.+|.++|..|+..|. +|++.|+++++++....++.
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~   54 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLS   54 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHH
Confidence            346888898 9999999999999998 99999999988877554443

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.68  E-value=0.083  Score=42.63  Aligned_cols=115  Identities=20%  Similarity=0.240  Sum_probs=69.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc-C--CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           65 WALITGATDGIGKAFAHQLAQH-G--LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~-G--~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+.|+||++.+|.+++..|+.+ +  ..+++.|+++ +.+....++...  ......... .+++         ..+.+.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~--~~~~~v~~~-~~~~---------~~~~~~   68 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI--PTAVKIKGF-SGED---------ATPALE   68 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS--CSSEEEEEE-CSSC---------CHHHHT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC--CCCceEEEe-cCCC---------cHHHhC
Confidence            4789999999999999999876 5  4799999987 455555566543  111111110 0111         112233


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS  205 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS  205 (210)
                        +.|++|..||.... +    ..+.++   .++.|..-.-.+.+.+.++   ...+.++++|-
T Consensus        69 --~aDivii~ag~~rk-p----G~~R~d---ll~~N~~I~~~i~~~i~~~---~p~a~vlvvtN  119 (312)
T 3hhp_A           69 --GADVVLISAGVARK-P----GMDRSD---LFNVNAGIVKNLVQQVAKT---CPKACIGIITN  119 (312)
T ss_dssp             --TCSEEEECCSCSCC-T----TCCHHH---HHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred             --CCCEEEEeCCCCCC-C----CCCHHH---HHHHHHHHHHHHHHHHHHH---CCCcEEEEecC
Confidence              58899999997532 2    234443   6777765555555544332   34567777763

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.66  E-value=0.063  Score=43.56  Aligned_cols=114  Identities=11%  Similarity=0.213  Sum_probs=69.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ...+.|+|| |.+|..++..++..+.  .+++.|+++++++....++.+..+ ...+.+. .   ++   .       +.
T Consensus         9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~---~~---~-------~a   73 (326)
T 2zqz_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-S---AE---Y-------SD   73 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-E---CC---G-------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-E---CC---H-------HH
Confidence            457899998 9999999999998875  799999999888877777755311 0111111 1   11   1       11


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh-CCCCEEEEecc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR-RKKGAIVNIGS  205 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~-~~~g~iv~isS  205 (210)
                      +.  +-|++|..+|.... +    ..+.++   .+..|..-.-.+.    +.+.+ ...+.++++|-
T Consensus        74 ~~--~aDvVii~ag~~~k-~----g~~R~d---l~~~n~~i~~~i~----~~i~~~~p~a~iiv~tN  126 (326)
T 2zqz_A           74 AK--DADLVVITAGAPQK-P----GETRLD---LVNKNLKILKSIV----DPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             GG--GCSEEEECCCCC----------CHHH---HHHHHHHHHHHHH----HHHHHHTCCSEEEECSS
T ss_pred             hC--CCCEEEEcCCCCCC-C----CCCHHH---HHHHHHHHHHHHH----HHHHHHCCCeEEEEeCC
Confidence            33  47899999987532 2    123333   4555554444444    43433 34677777653

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.65  E-value=0.0023  Score=58.23  Aligned_cols=78  Identities=17%  Similarity=0.195  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++|+|.||++|+|...++.....|++|+.+++++ +.+.+    + .  +... +  .|..    ..+..+.+.+..+
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l----~-l--ga~~-v--~~~~----~~~~~~~i~~~t~  409 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV----E-L--SREH-L--ASSR----TCDFEQQFLGATG  409 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS----C-S--CGGG-E--ECSS----SSTHHHHHHHHSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh----h-c--Chhh-e--eecC----ChhHHHHHHHHcC
Confidence            489999999999999998888888999999998765 32211    1 1  1111 1  1221    2234456666555


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|+++++.|.
T Consensus       410 g~GvDvVld~~gg  422 (795)
T 3slk_A          410 GRGVDVVLNSLAG  422 (795)
T ss_dssp             SSCCSEEEECCCT
T ss_pred             CCCeEEEEECCCc
Confidence            5579999998874

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.58  E-value=0.0023  Score=50.77  Aligned_cols=44  Identities=25%  Similarity=0.356  Sum_probs=37.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      ++.++.++|.|+ |++|+++++.|.+.|++|++++|+.++.+++.
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            345889999996 79999999999999999999999987766543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=96.58  E-value=0.0046  Score=62.75  Aligned_cols=83  Identities=13%  Similarity=0.153  Sum_probs=54.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++|+|.||++|+|.+.++.....|++|+++++++++.+.+.+.....  +.. .+  .|..+    .+..+.+.+..+
T Consensus      1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~l--ga~-~v--~~~~~----~~~~~~i~~~t~ 1737 (2512)
T 2vz8_A         1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQL--DET-CF--ANSRD----TSFEQHVLRHTA 1737 (2512)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTC--CST-TE--EESSS----SHHHHHHHHTTT
T ss_pred             CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCC--Cce-EE--ecCCC----HHHHHHHHHhcC
Confidence            4899999999999999998877789999999999887766544321111  111 11  12222    233455555444


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      +..+|+++++.|
T Consensus      1738 g~GvDvVld~~g 1749 (2512)
T 2vz8_A         1738 GKGVDLVLNSLA 1749 (2512)
T ss_dssp             SCCEEEEEECCC
T ss_pred             CCCceEEEECCC
Confidence            446899998775

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.56  E-value=0.046  Score=43.83  Aligned_cols=43  Identities=23%  Similarity=0.383  Sum_probs=36.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQ  108 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~  108 (210)
                      ++.|.|| |.+|..++..++.+|.  +|++.|+++++++....++.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~   46 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIA   46 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhh
Confidence            5778898 9999999999999998  89999999887766555553

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.55  E-value=0.064  Score=43.31  Aligned_cols=113  Identities=14%  Similarity=0.288  Sum_probs=68.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCC--ceeEEEEEecccCccchhhHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPN--TQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ...+.|+|| |.+|..++..++.+|.  .|++.|+++++++....++.+..+.  ..+.+. .   ++          .+
T Consensus         6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~---~~----------~~   70 (317)
T 3d0o_A            6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-A---GE----------YS   70 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-E---CC----------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-e---CC----------HH
Confidence            456888898 9999999999999884  7999999988887655555442111  122111 1   11          11


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEec
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIG  204 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~is  204 (210)
                      .+.  +-|++|..+|.... +    ..+.++   .+..|..-.    +...+.+.+. ..+.++++|
T Consensus        71 a~~--~aDvVvi~ag~~~~-~----g~~r~d---l~~~n~~i~----~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           71 DCH--DADLVVICAGAAQK-P----GETRLD---LVSKNLKIF----KSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             GGT--TCSEEEECCCCCCC-T----TCCHHH---HHHHHHHHH----HHHHHHHHHTTCCSEEEECS
T ss_pred             HhC--CCCEEEECCCCCCC-C----CCcHHH---HHHHHHHHH----HHHHHHHHHhCCCcEEEEec
Confidence            233  57899999987532 2    223332   455555443    4444444443 456677655

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.49  E-value=0.0071  Score=48.46  Aligned_cols=43  Identities=23%  Similarity=0.310  Sum_probs=37.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      .++.|+++.|.|+ |++|+++++.+...|++|++.+|+.++.+.
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~  195 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR  195 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            3567999999996 899999999999999999999999876554

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.49  E-value=0.0048  Score=48.86  Aligned_cols=43  Identities=7%  Similarity=0.149  Sum_probs=38.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      +.||.++|.|+++=.|+.+|+.|.++|++|+++.++...+++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~  190 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSM  190 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHh
Confidence            5699999999998899999999999999999998876666543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.48  E-value=0.011  Score=48.10  Aligned_cols=40  Identities=20%  Similarity=0.156  Sum_probs=32.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeE-EEEecChhHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNL-ILVSRNHNKLEK  102 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~V-i~~~r~~~~l~~  102 (210)
                      .|++++|+|+ +|+|...++.+...|+.+ +++++++++++.
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~  200 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL  200 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH
Confidence            3889999987 899999888888899875 678888877653

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.48  E-value=0.0062  Score=47.79  Aligned_cols=46  Identities=30%  Similarity=0.452  Sum_probs=39.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      ++.| +++|.|+ |++|+++++.|.+.|++|++++|+.++.++..++.
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            4557 8999996 78999999999999999999999988877665544

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.47  E-value=0.08  Score=42.55  Aligned_cols=45  Identities=22%  Similarity=0.238  Sum_probs=37.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHh
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQA  109 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~  109 (210)
                      +.+.|+|| |.+|..++..++..|. +|++.|+++++++....++.+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~   48 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE   48 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHH
Confidence            46889998 9999999999999996 899999999888766555543

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.44  E-value=0.032  Score=45.11  Aligned_cols=113  Identities=19%  Similarity=0.230  Sum_probs=65.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCC-ceeEEEEEecccCccchhhHHHHHHHh
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPN-TQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ..+.|+|+ |.+|..++..++.+|.  .|++.|+++++++....++.+..+. ..+     .+...  .       .+.+
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~-----~i~~~--~-------~~a~   72 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQM-----SLYAG--D-------YSDV   72 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCE-----EEC----C-------GGGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCe-----EEEEC--C-------HHHh
Confidence            45788898 9999999999999987  8999999988777656666443110 111     11111  0       1123


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEec
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIG  204 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~is  204 (210)
                      .  +-|++|..+|.... +    ..+.+   +.+..|..-.-.+++.+.++   ...+.++++|
T Consensus        73 ~--~aDvVii~~g~p~k-~----g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~t  123 (318)
T 1y6j_A           73 K--DCDVIVVTAGANRK-P----GETRL---DLAKKNVMIAKEVTQNIMKY---YNHGVILVVS  123 (318)
T ss_dssp             T--TCSEEEECCCC-----------CHH---HHHHHHHHHHHHHHHHHHHH---CCSCEEEECS
T ss_pred             C--CCCEEEEcCCCCCC-C----CcCHH---HHHHhhHHHHHHHHHHHHHh---CCCcEEEEec
Confidence            3  57899999987432 1    12333   35666665555555554432   3456677654

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.41  E-value=0.067  Score=43.25  Aligned_cols=112  Identities=13%  Similarity=0.263  Sum_probs=66.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCC-ceeEEEEEecccCccchhhHHHHHHHh
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPN-TQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ..+.|+|| |.+|..++..++..+.  .+++.|+++++++....++.+..+. ..+.+. .   ++          .+.+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~---~~----------~~a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-S---GE----------YSDC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-E---CC----------GGGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-E---CC----------HHHh
Confidence            46889998 9999999999998886  7999999999888777777654210 111111 1   11          1123


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEec
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIG  204 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~is  204 (210)
                      .  +-|++|..+|.... ++    .+.+   +.+..|..    ..+...+.+.+. ..+.++++|
T Consensus        71 ~--~aDvVii~ag~~~~-~g----~~R~---dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           71 K--DADLVVITAGAPQK-PG----ESRL---DLVNKNLN----ILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             T--TCSEEEECCCC------------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECS
T ss_pred             C--CCCEEEECCCCCCC-CC----CCHH---HHHHHHHH----HHHHHHHHHHHhCCCeEEEEeC
Confidence            3  57899999987532 21    1222   23445544    344444444443 457777765

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.40  E-value=0.14  Score=41.13  Aligned_cols=112  Identities=14%  Similarity=0.196  Sum_probs=69.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           65 WALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ++.|+|| |.+|..++..++.++  ..+++.|+++++++....++.+..+ .....+. .   ++   .+       .+.
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~---~~---~~-------a~~   66 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-A---GS---YG-------DLE   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-E---CC---GG-------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-E---CC---HH-------HhC
Confidence            5788998 999999999999887  5799999999888877777765311 0111111 1   11   11       133


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh-CCCCEEEEecc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR-RKKGAIVNIGS  205 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~-~~~g~iv~isS  205 (210)
                        +-|++|..+|.... +    ..+.++   .+..|..-.    +...+.+.+ ...+.++++|-
T Consensus        67 --~aD~Vii~ag~~~~-~----g~~r~d---l~~~n~~i~----~~i~~~i~~~~p~a~iiv~tN  117 (310)
T 2xxj_A           67 --GARAVVLAAGVAQR-P----GETRLQ---LLDRNAQVF----AQVVPRVLEAAPEAVLLVATN  117 (310)
T ss_dssp             --TEEEEEECCCCCCC-T----TCCHHH---HHHHHHHHH----HHHHHHHHHHCTTCEEEECSS
T ss_pred             --CCCEEEECCCCCCC-C----CcCHHH---HHHhhHHHH----HHHHHHHHHHCCCcEEEEecC
Confidence              58899999997543 2    224443   455555444    444444443 34577777653

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.40  E-value=0.0051  Score=48.92  Aligned_cols=44  Identities=25%  Similarity=0.394  Sum_probs=38.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      .++.||.++|.|+|+-.|+.+|..|.++|++|+++.++...+++
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~  200 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLAD  200 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHH
Confidence            45679999999999889999999999999999999886655543

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=96.36  E-value=0.2  Score=41.45  Aligned_cols=117  Identities=13%  Similarity=0.116  Sum_probs=70.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-----eEEEEecC----hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-----NLILVSRN----HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNI  133 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-----~Vi~~~r~----~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~  133 (210)
                      ...|.|+||++.+|.+++..++..+.     .+++.+.+    +++++...-++....... ..  ...+..+       
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~-~~--~v~i~~~-------  101 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPL-LR--EVSIGID-------  101 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT-EE--EEEEESC-------
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhh-cC--CcEEecC-------
Confidence            46789999999999999999998764     27775543    444666666776532111 11  1112221       


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh--CCCCEEEEecc
Q 045749          134 KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR--RKKGAIVNIGS  205 (210)
Q Consensus       134 ~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~--~~~g~iv~isS  205 (210)
                        -.+.+.  +-|++|..||.... +    ..+..+   .++.|..    +.+...+.+.+  ...+.++++|-
T Consensus       102 --~y~~~~--daDvVVitag~prk-p----G~tR~D---Ll~~N~~----I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          102 --PYEVFE--DVDWALLIGAKPRG-P----GMERAA---LLDINGQ----IFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             --HHHHTT--TCSEEEECCCCCCC-T----TCCHHH---HHHHHHH----HHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             --CHHHhC--CCCEEEEcCCCCCC-C----CCCHHH---HHHHHHH----HHHHHHHHHHHhcCCCeEEEEecC
Confidence              123344  57899999987532 2    234443   5667753    45555555554  34577777663

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.34  E-value=0.0067  Score=48.61  Aligned_cols=43  Identities=16%  Similarity=0.306  Sum_probs=37.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE  101 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~  101 (210)
                      .++.||.++|.|+++=.|+.+|+.|.++|++|+++.|+...++
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~  203 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED  203 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence            4567999999999888999999999999999999998655544

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.34  E-value=0.2  Score=40.36  Aligned_cols=113  Identities=14%  Similarity=0.256  Sum_probs=67.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCC--CceeEEEEEecccCccchhhHHHHHHHh
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+.|+|+ +.+|.+++..++.+|.  .|++.|+++++++....++.+..+  ........   +++          .+.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~---~~~----------~~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTG---TND----------YGPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEE---ESS----------SGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEE---CCC----------HHHh
Confidence            3678896 9999999999999887  899999999888776666654210  11111111   111          1123


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGS  205 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS  205 (210)
                      .  +-|++|.+||.... +    ..+.+   +.++.|..-    .+...+.+.+. ..+.++++|-
T Consensus        68 ~--~aDvVii~ag~~~k-p----G~~R~---dl~~~N~~i----~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           68 E--DSDVCIITAGLPRS-P----GMSRD---DLLAKNTEI----VGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             T--TCSEEEECCCC------------CH---HHHHHHHHH----HHHHHHHHHTTCTTCEEEECCS
T ss_pred             C--CCCEEEECCCCCCC-C----CCCHH---HHHHhhHHH----HHHHHHHHHHhCCCcEEEecCC
Confidence            3  47899999997532 2    11222   356666543    44455555444 3567777664

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.34  E-value=0.01  Score=47.45  Aligned_cols=42  Identities=19%  Similarity=0.314  Sum_probs=37.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      ++.|+++.|.|+ |+||+++++.+...|++|++.+|+.++.+.
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~  193 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR  193 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            466999999995 899999999999999999999999876543

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.31  E-value=0.011  Score=46.98  Aligned_cols=43  Identities=21%  Similarity=0.317  Sum_probs=36.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      +++.|.|+ +.+|.++|+.+++.|++|++.+|+++.+++..+.+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF   47 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            45667765 78999999999999999999999999887776653

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.30  E-value=0.014  Score=47.79  Aligned_cols=63  Identities=24%  Similarity=0.398  Sum_probs=49.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEE
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      ++.+..|+|.|+ +|+|.++++.|++.|. +++++|.+                   ..+.+.+.+.+.+.+|..++..+
T Consensus        33 ~L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~  111 (346)
T 1y8q_A           33 RLRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVD  111 (346)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEE
Confidence            345788999986 7999999999999997 68888643                   34677788888888877777766


Q ss_pred             EEec
Q 045749          120 EYDF  123 (210)
Q Consensus       120 ~~D~  123 (210)
                      ..++
T Consensus       112 ~~~~  115 (346)
T 1y8q_A          112 TEDI  115 (346)
T ss_dssp             CSCG
T ss_pred             eccc
Confidence            5444

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.27  E-value=0.0063  Score=47.74  Aligned_cols=41  Identities=22%  Similarity=0.362  Sum_probs=35.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKI  103 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~  103 (210)
                      ..| .++|.|+ ||.|++++..|++.|+ +|++++|+.++.+++
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            457 8899987 8999999999999998 899999998876543

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.26  E-value=0.0085  Score=47.48  Aligned_cols=45  Identities=18%  Similarity=0.318  Sum_probs=39.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l  107 (210)
                      .++.++|.|+ ||.|++++..|++.|+ +|++++|+.++.+++.+++
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            3678999985 8999999999999997 7999999999888877665

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.26  E-value=0.006  Score=46.86  Aligned_cols=39  Identities=10%  Similarity=0.155  Sum_probs=33.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .+.++|.|+ +.+|+.++++|.+.|+ |++++++++..++.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~   47 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVL   47 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHH
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHH
Confidence            457888887 8999999999999999 99999998876544

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.24  E-value=0.0059  Score=48.58  Aligned_cols=44  Identities=23%  Similarity=0.422  Sum_probs=37.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      .++.||.++|.|+++=.|+.+|+.|.++|++|+++.++...+++
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~  200 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKS  200 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence            45679999999998889999999999999999999887655543

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.23  E-value=0.0079  Score=47.90  Aligned_cols=45  Identities=20%  Similarity=0.393  Sum_probs=39.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .++.||.++|.|++.=+|+.+|+.|.++|++|+++.++...+++.
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~  199 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH  199 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Confidence            456799999999988899999999999999999999887666543

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=96.22  E-value=0.025  Score=48.43  Aligned_cols=44  Identities=18%  Similarity=0.209  Sum_probs=35.9

Q ss_pred             cEEEEEcCCC-hHHHHHHHHHHHc----CCeEEEEecChhHHHHHHHHH
Q 045749           64 SWALITGATD-GIGKAFAHQLAQH----GLNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        64 k~vlITGass-GiG~~~a~~l~~~----G~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      ..+.|.||++ |.|.+++..+++.    |..|++.|+++++++...+..
T Consensus         4 ~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~   52 (480)
T 1obb_A            4 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIA   52 (480)
T ss_dssp             CEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHH
Confidence            4678889999 9999999998854    789999999998877754443

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=96.21  E-value=0.0084  Score=48.97  Aligned_cols=76  Identities=16%  Similarity=0.230  Sum_probs=45.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+||++++|...++.....| ++|+.++ +.++.+.+.     .  +... +  .| .++    +..+.+.+..
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~--ga~~-~--~~-~~~----~~~~~~~~~~  205 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----D--SVTH-L--FD-RNA----DYVQEVKRIS  205 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----G--GSSE-E--EE-TTS----CHHHHHHHHC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----c--CCcE-E--Ec-CCc----cHHHHHHHhc
Confidence            48999999999999998776655554 6787777 444443322     1  2211 1  23 222    2234444433


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      + ..+|+++.++|.
T Consensus       206 ~-~g~Dvv~d~~g~  218 (349)
T 4a27_A          206 A-EGVDIVLDCLCG  218 (349)
T ss_dssp             T-TCEEEEEEECC-
T ss_pred             C-CCceEEEECCCc
Confidence            3 369999999875

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.14  E-value=0.007  Score=48.49  Aligned_cols=44  Identities=14%  Similarity=0.244  Sum_probs=38.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      .++.||.++|.|++.-+|+.+|+.|.++|++|+++.++...+++
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~  204 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE  204 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHH
Confidence            45779999999999889999999999999999999887665543

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.12  E-value=0.3  Score=39.20  Aligned_cols=109  Identities=17%  Similarity=0.231  Sum_probs=67.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhh----CCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAE----NPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.|+|| |.+|..++..++.+|. .|++.|+++++++....++.+.    ....++..     +.+   .       +.+
T Consensus         2 I~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-----t~d---~-------~a~   65 (308)
T 2d4a_B            2 ITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISG-----SNS---Y-------EDM   65 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-----ESC---G-------GGG
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEE-----CCC---H-------HHh
Confidence            678898 9999999999998887 6999999998887766666442    11222211     111   0       123


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh-CCCCEEEEec
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR-RKKGAIVNIG  204 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~-~~~g~iv~is  204 (210)
                      .  +-|++|..+|.... ++    .+.++   .+..|..    +.+...+.+.+ ...+.++++|
T Consensus        66 ~--~aD~Vi~~ag~~~k-~G----~~r~d---l~~~n~~----i~~~i~~~i~~~~p~a~iiv~t  116 (308)
T 2d4a_B           66 R--GSDIVLVTAGIGRK-PG----MTREQ---LLEANAN----TMADLAEKIKAYAKDAIVVITT  116 (308)
T ss_dssp             T--TCSEEEECCSCCCC-SS----CCTHH---HHHHHHH----HHHHHHHHHHHHCTTCEEEECC
T ss_pred             C--CCCEEEEeCCCCCC-CC----CcHHH---HHHHHHH----HHHHHHHHHHHHCCCeEEEEeC
Confidence            3  57899999997543 21    23332   3444433    44555555544 3456777765

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.08  E-value=0.015  Score=48.88  Aligned_cols=40  Identities=15%  Similarity=0.410  Sum_probs=34.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      ..++|.|+ +-+|..+++.|.+.|..|++++++++..++..
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~   44 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR   44 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence            45888887 77999999999999999999999998876654

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.07  E-value=0.23  Score=39.95  Aligned_cols=77  Identities=14%  Similarity=0.266  Sum_probs=52.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCc--eeEEEEEecccCccchhhHHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNT--QINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++.|+|+ |.+|..++..++.+|.  +|++.|+++++++....++.+..+..  ...+..    ++   .       +.
T Consensus         7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~----~~---~-------~a   71 (316)
T 1ldn_A            7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH----GD---Y-------DD   71 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE----CC---G-------GG
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc----Cc---H-------HH
Confidence            57889998 9999999999998874  79999999887766556665532211  222221    11   1       12


Q ss_pred             hcCCCccEEEEcCCCCCC
Q 045749          140 IDGLEVGVLINNVGITYP  157 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~  157 (210)
                      +.  +-|++|.++|....
T Consensus        72 l~--~aDvViia~~~~~~   87 (316)
T 1ldn_A           72 CR--DADLVVICAGANQK   87 (316)
T ss_dssp             TT--TCSEEEECCSCCCC
T ss_pred             hC--CCCEEEEcCCCCCC
Confidence            33  57899999987643

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.07  E-value=0.0086  Score=48.12  Aligned_cols=40  Identities=20%  Similarity=0.160  Sum_probs=34.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|+|| |++|...++.....|++|+.++ ++++++.+
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~  181 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA  181 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH
Confidence            4899999999 9999998888888899999999 77776544

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.03  E-value=0.025  Score=47.79  Aligned_cols=62  Identities=19%  Similarity=0.274  Sum_probs=48.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEEEE
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIVEY  121 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~~~  121 (210)
                      .+..|+|.|+ ||+|.++++.|++.|. ++.++|.+                   ..+.+.+++.+++.+|..++..+..
T Consensus        39 ~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~  117 (434)
T 1tt5_B           39 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  117 (434)
T ss_dssp             HTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEES
T ss_pred             cCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEec
Confidence            5678899887 8999999999999997 68888753                   1467777888888887777777665


Q ss_pred             ecc
Q 045749          122 DFS  124 (210)
Q Consensus       122 D~~  124 (210)
                      +++
T Consensus       118 ~i~  120 (434)
T 1tt5_B          118 KIQ  120 (434)
T ss_dssp             CGG
T ss_pred             ccc
Confidence            443

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.02  E-value=0.014  Score=48.92  Aligned_cols=42  Identities=14%  Similarity=0.058  Sum_probs=37.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      +.|++++|+|+ |++|+..++.+...|++|++++++.++++..
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            56899999997 8999999999999999999999999887654

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.01  E-value=0.018  Score=45.95  Aligned_cols=41  Identities=22%  Similarity=0.353  Sum_probs=35.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISN  105 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~  105 (210)
                      +++.|.|+ +.+|.++|..|++.|++|++++|+++++++..+
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   56 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   56 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            46778887 899999999999999999999999988776543

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.96  E-value=0.016  Score=49.39  Aligned_cols=54  Identities=19%  Similarity=0.380  Sum_probs=41.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      +++|.|+ |-+|..+|++|.++|+.|++++++++.++++.+++       .+..+..|-+++
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~   58 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHP   58 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCH
Confidence            4777777 78999999999999999999999999887665442       234455555544

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=95.93  E-value=0.013  Score=48.66  Aligned_cols=43  Identities=12%  Similarity=0.081  Sum_probs=38.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .+.|++++|.|+ +++|+..++.+...|++|++++|++++++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            457999999996 8999999999999999999999998877654

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.92  E-value=0.022  Score=50.36  Aligned_cols=64  Identities=20%  Similarity=0.304  Sum_probs=49.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCh-------------------hHHHHHHHHHHhhCCCceeEEEE
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNH-------------------NKLEKISNEIQAENPNTQINIVE  120 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~-------------------~~l~~~~~~l~~~~~~~~~~~~~  120 (210)
                      +.+..|+|.|+ ||+|-++++.|++.|. ++.++|.+.                   .+.+.+++.+++.+|..++..+.
T Consensus        15 L~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~   93 (640)
T 1y8q_B           15 VAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYH   93 (640)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEE
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEe
Confidence            34678899887 8999999999999997 688988652                   34666777788888888887777


Q ss_pred             Eeccc
Q 045749          121 YDFSC  125 (210)
Q Consensus       121 ~D~~~  125 (210)
                      .+++.
T Consensus        94 ~~i~~   98 (640)
T 1y8q_B           94 DSIMN   98 (640)
T ss_dssp             SCTTS
T ss_pred             cccch
Confidence            66643

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=95.90  E-value=0.074  Score=44.77  Aligned_cols=43  Identities=14%  Similarity=0.135  Sum_probs=37.0

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE  101 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~  101 (210)
                      ...+.||+++|.|. |.||+.+|+.+...|++|+++++++.+..
T Consensus       215 ~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~  257 (435)
T 3gvp_A          215 DMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICAL  257 (435)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhH
Confidence            34567999999988 57999999999999999999999976543

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=95.88  E-value=0.018  Score=49.47  Aligned_cols=43  Identities=19%  Similarity=0.207  Sum_probs=37.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      ...|++++|.|+ |+||+.+|+.+...|++|+++++++.+++..
T Consensus       271 ~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A  313 (494)
T 3ce6_A          271 LIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQA  313 (494)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            456999999996 9999999999999999999999998876543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.82  E-value=0.02  Score=45.40  Aligned_cols=41  Identities=12%  Similarity=0.221  Sum_probs=36.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      .++.|.|++|.+|.++++.|++.|++|++++|++++.++..
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            46889999999999999999999999999999988776654

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.79  E-value=0.013  Score=47.46  Aligned_cols=39  Identities=26%  Similarity=0.208  Sum_probs=34.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~   98 (210)
                      .++.||++.|.|. |.||+++|+.+...|++|+..+|+++
T Consensus       135 ~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~  173 (315)
T 3pp8_A          135 YTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRK  173 (315)
T ss_dssp             CCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCC
T ss_pred             CCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCch
Confidence            4567999999977 89999999999999999999999754

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.77  E-value=0.1  Score=41.93  Aligned_cols=111  Identities=17%  Similarity=0.221  Sum_probs=65.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc--CCeEEEEecChhHHHHHHHHHHhh----CCCceeEEEEEecccCccchhhHHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQH--GLNLILVSRNHNKLEKISNEIQAE----NPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~--G~~Vi~~~r~~~~l~~~~~~l~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++.|.|+ |.+|..++..|++.  |.+|+++|+++++++....++.+.    ....++     ..+.+         .. 
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i-----~~t~d---------~~-   65 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKV-----TGSND---------YA-   65 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEE-----EEESC---------GG-
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEE-----EECCC---------HH-
Confidence            4678898 99999999999985  789999999998877655444321    111111     11122         11 


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEec
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIG  204 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~is  204 (210)
                      .+.  +.|++|.++|.... +    ..+..   +.++.|..-.-.+.+.+.++   ...+.+++++
T Consensus        66 ~l~--~aDvViiav~~p~~-~----g~~r~---dl~~~n~~i~~~i~~~i~~~---~~~~~viv~t  118 (310)
T 1guz_A           66 DTA--NSDIVIITAGLPRK-P----GMTRE---DLLMKNAGIVKEVTDNIMKH---SKNPIIIVVS  118 (310)
T ss_dssp             GGT--TCSEEEECCSCCCC-T----TCCHH---HHHHHHHHHHHHHHHHHHHH---CSSCEEEECC
T ss_pred             HHC--CCCEEEEeCCCCCC-C----CCCHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEEc
Confidence            123  47899999985321 1    22222   35556655554555554443   2456666664

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.75  E-value=0.018  Score=43.71  Aligned_cols=40  Identities=20%  Similarity=0.401  Sum_probs=34.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      ++++.|.| .|.+|.++++.|++.|++|++++|++++.++.
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~   67 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL   67 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            35688888 79999999999999999999999998876554

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=95.62  E-value=0.31  Score=41.56  Aligned_cols=42  Identities=17%  Similarity=0.224  Sum_probs=34.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc-----CCeEEEEecChhHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQH-----GLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~-----G~~Vi~~~r~~~~l~~~~  104 (210)
                      ...+.|.||+++.|.+++..|+++     +..|++.|+++++++...
T Consensus        28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~   74 (472)
T 1u8x_X           28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIA   74 (472)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHH
Confidence            346778898888888899999988     567999999998877644

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.61  E-value=0.1  Score=42.79  Aligned_cols=39  Identities=28%  Similarity=0.305  Sum_probs=34.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~   98 (210)
                      .++.||++.|.|. |.||+++|+.+...|++|+..+|+..
T Consensus       160 ~~l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~  198 (351)
T 3jtm_A          160 YDLEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQM  198 (351)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCC
T ss_pred             ccccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCcc
Confidence            3577999999986 78999999999999999999999753

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.60  E-value=0.007  Score=49.19  Aligned_cols=37  Identities=11%  Similarity=0.153  Sum_probs=32.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE  101 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~  101 (210)
                      .+.++|.|+ +.+|+.++++|.++|. |+++++++++.+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~  151 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK  151 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh
Confidence            457899997 8999999999999999 999999998776

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	210
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-28
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	7e-27
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-25
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	9e-25
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	4e-23
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-23
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-22
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	3e-22
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	3e-22
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-22
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	9e-22
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-21
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	4e-21
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	4e-21
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	5e-21
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	7e-21
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	9e-21
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-20
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-20
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	3e-20
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	3e-20
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-20
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-20
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	7e-20
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	2e-19
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	3e-19
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-19
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-19
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	8e-19
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	3e-18
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	3e-17
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-17
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	3e-17
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	6e-17
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	7e-17
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	3e-16
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	3e-16
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-16
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-15
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-15
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	9e-15
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-14
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-14
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	5e-14
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	5e-14
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	5e-14
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	8e-14
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	1e-13
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-13
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-13
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	4e-13
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	7e-13
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-12
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-12
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-12
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-12
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	3e-12
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	6e-12
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-11
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-10
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	2e-10
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	8e-09
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-08
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	6e-07
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	8e-07
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	8e-07
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	5e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	9e-06
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	5e-05
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	7e-05
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	8e-04
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	0.002
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	0.002
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	0.003
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.003
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	0.004

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 2e-28
 Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 10/149 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA+ GIG A A  L Q GL ++  +R    +E+++ E ++      +        C
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR----C 68

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+ +  +I +           V + INN G+  P            W D+  VN+   + 
Sbjct: 69  DLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDT--LLSGSTSGWKDMFNVNVLALSI 126

Query: 184 VTKAVLTGMMRRK--KGAIVNIGSGAAIV 210
            T+     M  R    G I+NI S +   
Sbjct: 127 CTREAYQSMKERNVDDGHIININSMSGHR 155

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (251), Expect = 7e-27
 Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 12/156 (7%)

Query: 57  KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQI 116
           K++   G   LITGA  GIG+  A++ A+    L+L   N + LE+ + + +        
Sbjct: 3   KSVT--GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHT 60

Query: 117 NIVEYDFSCDVVSAGNIKAI--EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIV 174
                 F  D  +  +I +   ++  +  +V +L+NN G+ Y   +      + +     
Sbjct: 61  ------FVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDL--FATQDPQIEKTF 112

Query: 175 RVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            VN+      TKA L  M +   G IV + S A  V
Sbjct: 113 EVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV 148

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.2 bits (241), Expect = 3e-25
 Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 13/148 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQ-HGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
           AL+TG   GIG A    L +    +++L +R+  + +    ++QAE  + +         
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRF------HQ 59

Query: 125 CDVVSAGNIKAIEMAIDGLE--VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
            D+    +I+A+   +      + VL+NN GI +  A         +    ++ N  GT 
Sbjct: 60  LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVA--DPTPFHIQAEVTMKTNFFGTR 117

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            V   +L  +  + +G +VN+ S  ++ 
Sbjct: 118 DVCTELLPLI--KPQGRVVNVSSIMSVR 143

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 96.6 bits (240), Expect = 9e-25
 Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 6/157 (3%)

Query: 56  PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQ 115
           P      G   L+TGA  G+G+A+A   A+ G  +++     +          A+    +
Sbjct: 2   PLRFD--GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEE 59

Query: 116 INIVEYDFSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDI 173
           I         +  S    +  ++ A+D    + V++NN GI   ++  F  + +++W  I
Sbjct: 60  IRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRS--FSRISDEDWDII 117

Query: 174 VRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            RV+L G+ +VT+A    M ++  G I+   S + I 
Sbjct: 118 QRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY 154

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 90.7 bits (225), Expect = 4e-23
 Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 12/147 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITG  +GIG+A A + A  G ++ +         +    I+                C
Sbjct: 8   AVITGGANGIGRAIAERFAVEGADIAIADL--VPAPEAEAAIRNLGRRVLT------VKC 59

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV   G+++A  +  I       +L+NN GI       F E+  ++W     +N++    
Sbjct: 60  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIP--FDELTFEQWKKTFEINVDSGFL 117

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           + KA + GM R   G I+N+ S    +
Sbjct: 118 MAKAFVPGMKRNGWGRIINLTSTTYWL 144

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 90.4 bits (224), Expect = 7e-23
 Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 58  NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQIN 117
           NL+  G  AL+TG + GIG     +LA  G ++   SRN  +L     + +++    +  
Sbjct: 5   NLE--GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEA- 61

Query: 118 IVEYDFSCDVVSAGNIKAIEMAID---GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIV 174
                  CD+ S    + +   +      ++ +L+NN GI   K     +   +++  I+
Sbjct: 62  -----SVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKE--AKDYTVEDYSLIM 114

Query: 175 RVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            +N E    ++      +   ++G +V I S +  +
Sbjct: 115 SINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL 150

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 89.6 bits (222), Expect = 2e-22
 Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 8/147 (5%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITG+++GIG+A A   A+ G  + +  R+  +LE+   +I A   + Q          
Sbjct: 8   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS---VVA 64

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAM--FFHEVDEKEWMDIVRVNLEGT 181
           DV +       +   +    ++ +L+NN G   P +          + +   + +NL   
Sbjct: 65  DVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSV 124

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAA 208
             +TK  +   +   KG IVNI S A+
Sbjct: 125 IALTKKAVP-HLSSTKGEIVNISSIAS 150

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 89.3 bits (221), Expect = 3e-22
 Identities = 32/149 (21%), Positives = 59/149 (39%), Gaps = 7/149 (4%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +ITG+++GIG+  A   AQ G N+ +  R+  +LE+    I     + +          
Sbjct: 8   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS---VVA 64

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAM--FFHEVDEKEWMDIVRVNLEGT 181
           DV +       I   +    ++ VL+NN G   P A      +     +   +++NL+  
Sbjct: 65  DVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAV 124

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             +TK V   ++  K   +      A   
Sbjct: 125 IEMTKKVKPHLVASKGEIVNVSSIVAGPQ 153

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 88.9 bits (220), Expect = 3e-22
 Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 13/153 (8%)

Query: 58  NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQIN 117
           +LK      L+TG T GIG A   + A  G  +   +RN  +L +  ++ Q +       
Sbjct: 5   SLK--AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTG- 61

Query: 118 IVEYDFSCDVVSAGNIKAIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIV 174
                  CD       + +   +  +  G   +LINN+G    K     +   +++   +
Sbjct: 62  -----SVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKP--TLDYTAEDFSFHI 114

Query: 175 RVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA 207
             NLE    +++     +     G I+ + S A
Sbjct: 115 STNLESAYHLSQLAHPLLKASGCGNIIFMSSIA 147

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 88.4 bits (219), Expect = 4e-22
 Identities = 38/147 (25%), Positives = 55/147 (37%), Gaps = 16/147 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TG   GIG+A A   A+ G  + L        E ++  I               F  
Sbjct: 8   VLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAIGGAF-----------FQV 55

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           D+         +E A   L  V VL+NN  I  P +     V   EW  ++ VNL     
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGS--ALTVRLPEWRRVLEVNLTAPMH 113

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           ++      M +   GAIVN+ S   + 
Sbjct: 114 LSALAAREMRKVGGGAIVNVASVQGLF 140

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 87.4 bits (216), Expect = 9e-22
 Identities = 28/147 (19%), Positives = 57/147 (38%), Gaps = 14/147 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TG   G+G      L   G  +     N    ++++ E+   +              
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERS---------MFVRH 59

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV S  +    +      L  + VL+NN GI  P          +++  ++++N E    
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGD--METGRLEDFSRLLKINTESVFI 117

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
             +  +   M+   G+I+N+ S ++ +
Sbjct: 118 GCQQGIA-AMKETGGSIINMASVSSWL 143

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 87.8 bits (217), Expect = 1e-21
 Identities = 31/147 (21%), Positives = 63/147 (42%), Gaps = 9/147 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITG   GIG+  A    ++G  +++     +  +K+ N I + +       V     C
Sbjct: 9   AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-------VISFVHC 61

Query: 126 DVVSAGNIKAI--EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV    +++ +         ++ ++  NVG+         E   +++  ++ +N+ G   
Sbjct: 62  DVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           V K     M+  KKG+IV   S ++  
Sbjct: 122 VAKHAARVMIPAKKGSIVFTASISSFT 148

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 85.8 bits (212), Expect = 4e-21
 Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 8/146 (5%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A+ITG T GIG A A +  + G  +++  R+ +  EK +  +   +   QI   ++D S 
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD---QIQFFQHDSSD 65

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           +        A E A   +    L+NN GI   K     E    EW  ++ VNL+G    T
Sbjct: 66  EDGWTKLFDATEKAFGPVS--TLVNNAGIAVNK--SVEETTTAEWRKLLAVNLDGVFFGT 121

Query: 186 KAVLTGMMRRKKGA-IVNIGSGAAIV 210
           +  +  M  +  GA I+N+ S    V
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFV 147

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 85.7 bits (211), Expect = 4e-21
 Identities = 24/142 (16%), Positives = 56/142 (39%), Gaps = 8/142 (5%)

Query: 66  ALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDF 123
            ++TGA  GIG     QL +     ++I  +R+  K  ++ +       +++++++    
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK-----DSRVHVLPLTV 60

Query: 124 SCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           +CD      +  +   +    + +LINN G+         E +     + + VN      
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYG-TNTEPNRAVIAEQLDVNTTSVVL 119

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
           +T+ +L  +         +  S
Sbjct: 120 LTQKLLPLLKNAASKESGDQLS 141

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.6 bits (211), Expect = 5e-21
 Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 8/156 (5%)

Query: 55  QPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNT 114
           +P+ L+  G   ++TGA+ GIG+  A+ LA+ G ++++ +R+   L+K+ +        +
Sbjct: 8   RPEMLQ--GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS 65

Query: 115 QINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIV 174
              I        +      +        L  G+ +  +      ++     D       +
Sbjct: 66  AHYIA-----GTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSM 120

Query: 175 RVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            VN      +T A L  M+++  G+IV + S A  V
Sbjct: 121 EVNFLSYVVLTVAAL-PMLKQSNGSIVVVSSLAGKV 155

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.0 bits (210), Expect = 7e-21
 Identities = 29/145 (20%), Positives = 56/145 (38%), Gaps = 14/145 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TG   GIG          G  +++  ++ +    +  E+                 C
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVF----------ILC 58

Query: 126 DVVSAGNIKAI--EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV    ++K +  E       +  ++NN G   P      E   + +  ++ +NL GT  
Sbjct: 59  DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHH-PPPQRPEETSAQGFRQLLELNLLGTYT 117

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAA 208
           +TK  L   +R+ +G ++NI S   
Sbjct: 118 LTKLALP-YLRKSQGNVINISSLVG 141

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 84.6 bits (209), Expect = 9e-21
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 19/152 (12%)

Query: 58  NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQIN 117
           N    G  AL+TGA  GIG+     L   G  ++ V+R ++ L  ++ E     P     
Sbjct: 2   NFS--GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEP----- 54

Query: 118 IVEYDFSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRV 176
                   D+   G+  A E A+ G+  V +L+NN  +   +   F EV ++ +     V
Sbjct: 55  -----VCVDL---GDWDATEKALGGIGPVDLLVNNAALVIMQP--FLEVTKEAFDRSFSV 104

Query: 177 NLEGTTRVTKAVLTGMMRR-KKGAIVNIGSGA 207
           NL    +V++ V   M+ R   G+IVN+ S  
Sbjct: 105 NLRSVFQVSQMVARDMINRGVPGSIVNVSSMV 136

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.9 bits (207), Expect = 2e-20
 Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 16/144 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TGA  GIG+     L   G  ++ VSR    L+ +  E     P             
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEP----------VCV 59

Query: 126 DVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
           D+   G+ +A E A+  +  V +L+NN  +       F EV ++ +     VNL    +V
Sbjct: 60  DL---GDWEATERALGSVGPVDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQV 114

Query: 185 TKAVLTGMMRRKKGAIVNIGSGAA 208
           ++ V  G++ R     +   S   
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQC 138

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 84.1 bits (207), Expect = 2e-20
 Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 6/146 (4%)

Query: 63  GSWALITGATDGIGKAFAHQLAQ---HGLNLILVSRNHNKLEKISNEIQAENPNTQINIV 119
            +  ++TGA+ G G+A A QLA+    G  +++ +R+ + L ++  E+ A+ P+ ++ + 
Sbjct: 6   CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLA 65

Query: 120 EYDFSC--DVVSAGNIKAIEMAIDGLEVGVLINNVGIT-YPKAMFFHEVDEKEWMDIVRV 176
             D      V    +        +GL+  +LINN          F +  D  E  +   +
Sbjct: 66  AADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125

Query: 177 NLEGTTRVTKAVLTGMMRRKKGAIVN 202
           NL     +T   L         +   
Sbjct: 126 NLTSMLCLTSGTLNAFQDSPGLSKTV 151

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 83.5 bits (206), Expect = 3e-20
 Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 6/145 (4%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIG+  A  LA+   ++I +SR     + + +EI++    +        ++ 
Sbjct: 13  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSG------YAG 66

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           DV     I  +   I      V I        +   F  +   EW D++R NL     +T
Sbjct: 67  DVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYIT 126

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAIV 210
           + +   M+  + G I+NI S   + 
Sbjct: 127 QPISKRMINNRYGRIINISSIVGLT 151

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.3 bits (208), Expect = 3e-20
 Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 5/146 (3%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++TG   GIGKA   +L + G N+++ SR   +L+  ++E+QA  P T+   V   
Sbjct: 12  GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP- 70

Query: 123 FSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
             C++ +   +   ++  +D   ++  L+NN G  +        +  K W  ++  NL G
Sbjct: 71  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSP--AEHISSKGWHAVLETNLTG 128

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSG 206
           T  + KAV +  M+   G+IVNI   
Sbjct: 129 TFYMCKAVYSSWMKEHGGSIVNIIVP 154

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 3e-20
 Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 15/145 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++T A  GIG+A A   A+ G  +I    N +KL+++            I     D + 
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP-------GIQTRVLDVTK 61

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
                     +E       + VL N  G  +       + +EK+W   + +N+     + 
Sbjct: 62  KKQIDQFANEVER------LDVLFNVAGFVHHGT--VLDCEEKDWDFSMNLNVRSMYLMI 113

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAIV 210
           KA L  M+ +K G I+N+ S A+ V
Sbjct: 114 KAFLPKMLAQKSGNIINMSSVASSV 138

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.1 bits (205), Expect = 4e-20
 Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 19/153 (12%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  AL+TGA  GIG+AFA  L   G  + LV  N     +    +  +    +   ++  
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ-- 60

Query: 123 FSCDVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
             CDV     ++      +D    + +L+NN G+           +EK W   +++NL  
Sbjct: 61  --CDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN----------NEKNWEKTLQINLVS 108

Query: 181 TTRVTKAVLTGMMRRKK---GAIVNIGSGAAIV 210
               T   L  M ++     G I+N+ S A ++
Sbjct: 109 VISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM 141

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 82.3 bits (203), Expect = 7e-20
 Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 15/155 (9%)

Query: 58  NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQIN 117
           +L   G   +ITG   G+G   A Q    G  ++L      +    + E+          
Sbjct: 2   DLS--GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA------- 52

Query: 118 IVEYDFSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVR 175
              Y    DV    + +  +  A +    V  L+NN GI+    +    V+   +  +V 
Sbjct: 53  -ARY-QHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVE--RFRKVVE 108

Query: 176 VNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +NL G     K V+  M     G+IVNI S A ++
Sbjct: 109 INLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM 143

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 80.9 bits (199), Expect = 2e-19
 Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 13/152 (8%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLN-------LILVSRNHNKLEKISNEIQAENPNTQINI 118
            LITGA  GIG+A A + A+   +       L+L SR    LEKIS E +AE   T    
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT-- 61

Query: 119 VEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
                + D+    +++ +   I      +          +     ++ E+++   +  NL
Sbjct: 62  ----ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNL 117

Query: 179 EGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +GT  +T+A+   M R+  G I  I S AA  
Sbjct: 118 KGTFFLTQALFALMERQHSGHIFFITSVAATK 149

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 80.9 bits (199), Expect = 3e-19
 Identities = 27/150 (18%), Positives = 58/150 (38%), Gaps = 5/150 (3%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G   +ITG+++GIG++ A   A+ G  + +  RN ++LE+   +I       +       
Sbjct: 4   GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA--- 60

Query: 123 FSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
              DV  A      I   +    ++ +L+NN G          +   + +    ++N + 
Sbjct: 61  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              +T+     +++ K   +      A   
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ 150

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 79.8 bits (196), Expect = 6e-19
 Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 7/146 (4%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFS 124
            ++TGA+ GIGKA A  L + G  +++  +R+    E++S +I+A             F 
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQA------ITFG 57

Query: 125 CDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
            DV    +++A+          + +        +      + + +W +++ +NL G    
Sbjct: 58  GDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLC 117

Query: 185 TKAVLTGMMRRKKGAIVNIGSGAAIV 210
           T+A    MM+++KG I+NI S   ++
Sbjct: 118 TQAATKIMMKKRKGRIINIASVVGLI 143

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 79.8 bits (196), Expect = 6e-19
 Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 11/153 (7%)

Query: 58  NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQIN 117
           N +  G  AL+TGA+ GIG+A A  LA  G  +I  + + N  + IS+ + A        
Sbjct: 1   NFE--GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG------ 52

Query: 118 IVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVN 177
                   +V    +I+++   I      V I        +      + ++EW DI+  N
Sbjct: 53  ---KGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETN 109

Query: 178 LEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           L    R++KAV+  MM+++ G I+ IGS    +
Sbjct: 110 LSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM 142

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 80.1 bits (197), Expect = 8e-19
 Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 14/149 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITG   G+G+A   +    G  + ++ ++  +L     E++ ++ +  + IV      
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLA----ELETDHGDNVLGIV-----G 58

Query: 126 DVVSAGNIK-AIEMAIDGL-EVGVLINNVGITYPKA---MFFHEVDEKEWMDIVRVNLEG 180
           DV S  + K A    +    ++  LI N GI            E  +  + ++  +N++G
Sbjct: 59  DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAI 209
                KA L  ++  +   I  I +    
Sbjct: 119 YIHAVKACLPALVASRGNVIFTISNAGFY 147

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 78.2 bits (192), Expect = 3e-18
 Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 17/149 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +   A  GIG   + +L +  L   ++         ++ E++A NP   I    YD + 
Sbjct: 8   VIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALA-ELKAINPKVNITFHTYDVTV 66

Query: 126 DVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
            V  A + K ++   D L  V +LIN  GI           D+ +    + +N  G    
Sbjct: 67  PV--AESKKLLKKIFDQLKTVDILINGAGIL----------DDHQIERTIAINFTGLVNT 114

Query: 185 TKAVLTGMMRR---KKGAIVNIGSGAAIV 210
           T A+L    +R     G I NI S     
Sbjct: 115 TTAILDFWDKRKGGPGGIIANICSVTGFN 143

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 75.5 bits (185), Expect = 3e-17
 Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 15/137 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           A++T      G   A +L++ G  +     +  + +++    +                 
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETY------------PQL 50

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
             +S       IE       +V VL++N     P+     +   +++   V         
Sbjct: 51  KPMSEQEPAELIEAVTSAYGQVDVLVSNDIFA-PEFQPIDKYAVEDYRGAVEALQIRPFA 109

Query: 184 VTKAVLTGMMRRKKGAI 200
           +  AV + M +RK G I
Sbjct: 110 LVNAVASQMKKRKSGHI 126

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 75.5 bits (185), Expect = 3e-17
 Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 11/148 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TG + GIG A   +LA  G  +   SRN  +L++     + +  N +         C
Sbjct: 9   ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEG------SVC 62

Query: 126 DVVSAGNIKAIEMAIDGLEVG---VLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           D++S      +   +  +  G   +L+NN            +  EK++  I+  N E   
Sbjct: 63  DLLSRTERDKLMQTVAHVFDGKLNILVNNA--GVVIHKEAKDFTEKDYNIIMGTNFEAAY 120

Query: 183 RVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
            +++     +   + G ++ + S A   
Sbjct: 121 HLSQIAYPLLKASQNGNVIFLSSIAGFS 148

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 75.5 bits (185), Expect = 3e-17
 Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 11/138 (7%)

Query: 58  NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQIN 117
           +L+  G  AL+TG + G+G   A  LA+ G ++++ SRN  +  + + ++  +     + 
Sbjct: 2   DLR--GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMA 59

Query: 118 IVEYDFSCDVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDIVR 175
                  CDV +   +K +  A+     ++  ++N  GI         E    E+  ++ 
Sbjct: 60  FR-----CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP--AEEFPLDEFRQVIE 112

Query: 176 VNLEGTTRVTKAVLTGMM 193
           VNL GT  V +   + + 
Sbjct: 113 VNLFGTYYVCREAFSLLR 130

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 74.7 bits (183), Expect = 6e-17
 Identities = 28/142 (19%), Positives = 59/142 (41%), Gaps = 9/142 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++TG   GIG AF   +A  G N+ ++ R+     +++ ++  E              C
Sbjct: 12  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ-----C 66

Query: 126 DVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV +   +      ID     +  LI N G++        E+  +++  +  VN+ G   
Sbjct: 67  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFN 124

Query: 184 VTKAVLTGMMRRKKGAIVNIGS 205
             +AV    +++++   + + S
Sbjct: 125 TCRAVAKLWLQKQQKGSIVVTS 146

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 74.4 bits (182), Expect = 7e-17
 Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 3/145 (2%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITG   G+G+A A +LA  G  L LV  +   LE     +    P+ ++     D S 
Sbjct: 7   VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 66

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           +      + A       ++     NN GI   +          E+  +V +NL G     
Sbjct: 67  EAQVEAYVTATTERFGRID--GFFNNAGIEGKQNP-TESFTAAEFDKVVSINLRGVFLGL 123

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAIV 210
           + VL  M  +  G +VN  S   I 
Sbjct: 124 EKVLKIMREQGSGMVVNTASVGGIR 148

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 3e-16
 Identities = 35/145 (24%), Positives = 54/145 (37%), Gaps = 2/145 (1%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITG + GIG   A +LA        V      L+      +A                
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           DV  + ++ A    +    V VL+ N G+     +     D    +    VN+ GT R+ 
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVL--DVNVVGTVRML 122

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAIV 210
           +A L  M RR  G ++  GS   ++
Sbjct: 123 QAFLPDMKRRGSGRVLVTGSVGGLM 147

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 72.4 bits (177), Expect = 3e-16
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 11/138 (7%)

Query: 58  NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQIN 117
           NL+  G  A+ITGA  GIGK  A   A  G ++++   N +    + +EIQ         
Sbjct: 6   NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFA- 64

Query: 118 IVEYDFSCDVVSAGNIKAI-EMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVR 175
                  CD+ S   + A+ + AI  L +V +L+NN G   PK     ++   ++     
Sbjct: 65  -----CRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF---DMPMADFRRAYE 116

Query: 176 VNLEGTTRVTKAVLTGMM 193
           +N+     +++ V   M 
Sbjct: 117 LNVFSFFHLSQLVAPEME 134

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 71.2 bits (174), Expect = 9e-16
 Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 15/146 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            LITGA  GIG+A     A+ G  L+        L + +  + A                
Sbjct: 8   VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP-----------VVM 56

Query: 126 DVVSAGNIKAIEMAIDGL--EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV    +++            +  +++  GIT     F  ++  ++W  ++RVNL G+  
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGITRDN--FHWKMPLEDWELVLRVNLTGSFL 114

Query: 184 VTKAVLTGMMRRKKGAIVNIGSGAAI 209
           V KA    M  +  G+IV   S   +
Sbjct: 115 VAKAASEAMREKNPGSIVLTASRVYL 140

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 70.6 bits (172), Expect = 2e-15
 Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 9/155 (5%)

Query: 57  KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQI 116
           K     G   L+TGA   IG A A +LA+ G  + L+  N   LEK    ++ +    + 
Sbjct: 1   KKFN--GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS 58

Query: 117 NIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMF-FHEVDEKEWMDIVR 175
                 + CDV S   +     ++      +        Y  A     +    ++  ++ 
Sbjct: 59  ------YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLT 112

Query: 176 VNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           +N+ G   V KAV   M+ +  G IVN  S A + 
Sbjct: 113 INVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK 147

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 70.5 bits (172), Expect = 2e-15
 Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 10/139 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGAT GIG   A +L + GL + + +R    L     E++               +C
Sbjct: 5   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADG------RTC 58

Query: 126 DVVSAGNIKAIEMAI--DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTR 183
           DV S   I+A+  A+      V VL+NN G     A    E+ ++ W+D+V  NL G  R
Sbjct: 59  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA--TAELADELWLDVVETNLTGVFR 116

Query: 184 VTKAVLTGMMRRKKGAIVN 202
           VTK VL      ++G    
Sbjct: 117 VTKQVLKAGGMLERGTGRI 135

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 69.0 bits (168), Expect = 9e-15
 Identities = 31/153 (20%), Positives = 55/153 (35%), Gaps = 7/153 (4%)

Query: 56  PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQ 115
           P + +  G  A ITG   G+GK     L+  G   ++ SR  + L+  + +I ++  N  
Sbjct: 20  PNSFQ--GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKV 77

Query: 116 INIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVR 175
             I      CDV     ++     +  +     I               +    W  I  
Sbjct: 78  HAIQ-----CDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITD 132

Query: 176 VNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA 208
           + L GT  VT  +   +++ +KGA     +   
Sbjct: 133 IVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIY 165

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 68.3 bits (166), Expect = 1e-14
 Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 9/133 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           ALITG+  GIG+AFA    + G  + +   N       + EI                + 
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAA---------CAIAL 58

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           DV    +I      +      + I              E+  + +  +  +N+ GT  + 
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMM 118

Query: 186 KAVLTGMMRRKKG 198
           +AV   M+   +G
Sbjct: 119 QAVARAMIAGGRG 131

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 67.0 bits (163), Expect = 3e-14
 Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 9/140 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL++G   G+G +    +   G  ++       + + ++ E+           V  D + 
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA-----ARYVHLDVTQ 63

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
                  +     A  GL   VL+NN GI     +   +    EW  I+ VNL G     
Sbjct: 64  PAQWKAAVDTAVTAFGGLH--VLVNNAGILNIGTI--EDYALTEWQRILDVNLTGVFLGI 119

Query: 186 KAVLTGMMRRKKGAIVNIGS 205
           +AV+  M    +G+I+NI S
Sbjct: 120 RAVVKPMKEAGRGSIINISS 139

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 66.7 bits (162), Expect = 5e-14
 Identities = 28/144 (19%), Positives = 62/144 (43%), Gaps = 13/144 (9%)

Query: 57  KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAENPNTQ 115
           K+L+  G   +ITG++ G+GK+ A + A     +++  R+  ++   +  EI+       
Sbjct: 3   KDLE--GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60

Query: 116 INIVEYDFSCDVVSAGNIKAIEMAI--DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDI 173
                     DV    ++  +  +   +  ++ V+INN G+  P +   HE+   +W  +
Sbjct: 61  A------VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS--HEMSLSDWNKV 112

Query: 174 VRVNLEGTTRVTKAVLTGMMRRKK 197
           +  NL G    ++  +   +    
Sbjct: 113 IDTNLTGAFLGSREAIKYFVENDI 136

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 66.7 bits (162), Expect = 5e-14
 Identities = 27/153 (17%), Positives = 55/153 (35%), Gaps = 9/153 (5%)

Query: 55  QPKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAENPN 113
           Q  +L+  G  AL+TGA  GIG+  A +L + G  +I+   N     E++   I+    +
Sbjct: 12  QSASLE--GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD 69

Query: 114 TQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDI 173
                       +V    +I  +      +   + I              +V  +E+  +
Sbjct: 70  AAC------VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRV 123

Query: 174 VRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG 206
             +N  G   V +     +    +  ++   +G
Sbjct: 124 FTINTRGQFFVAREAYKHLEIGGRLILMGSITG 156

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 66.4 bits (161), Expect = 5e-14
 Identities = 31/154 (20%), Positives = 50/154 (32%), Gaps = 27/154 (17%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TG   G+G+A A  L   G  ++++       + I  E                   
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVE------------------G 45

Query: 126 DVVSAGNIKAIEMAI---DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
           DV    +++           L   V    VG+             + +  ++ VNL GT 
Sbjct: 46  DVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTF 105

Query: 183 RVTKAVL------TGMMRRKKGAIVNIGSGAAIV 210
            V +               ++G IVN  S AA  
Sbjct: 106 NVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE 139

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 65.9 bits (160), Expect = 8e-14
 Identities = 25/148 (16%), Positives = 55/148 (37%), Gaps = 11/148 (7%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEY 121
           G  AL TGA  GIG+  A +L + G ++++    +    E++  E++             
Sbjct: 6   GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVA----- 60

Query: 122 DFSCDVVSAGNIKAIEMAI--DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLE 179
               D+     + A+          +  +++N G+         EV ++ +  +  +N  
Sbjct: 61  -IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCD--ELEVTQELFDKVFNLNTR 117

Query: 180 GTTRVTKAVLTGMMRRKKGAIVNIGSGA 207
           G   V +  L    R  +  + +  +  
Sbjct: 118 GQFFVAQQGLKHCRRGGRIILTSSIAAV 145

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.7 bits (159), Expect = 1e-13
 Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 11/160 (6%)

Query: 57  KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQI 116
           +++K  G  A+ITG   G+G A A +L   G + +L+   ++  E  + ++         
Sbjct: 1   RSVK--GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPA 58

Query: 117 NIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRV 176
           ++         +    +   +     + V      V               +++  ++ V
Sbjct: 59  DVTSEKDVQTAL---ALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 115

Query: 177 NLEGTTRVTKAVLTGMMRR------KKGAIVNIGSGAAIV 210
           NL GT  V + V   M +       ++G I+N  S AA  
Sbjct: 116 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE 155

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 65.7 bits (159), Expect = 1e-13
 Identities = 24/142 (16%), Positives = 51/142 (35%), Gaps = 13/142 (9%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKL-EKISNEIQAENPNTQINIVEYDFS 124
           A+ITG    IG + A +L Q G  +++  R+     +++  E+ A    + + + + D S
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAV-LCKGDLS 62

Query: 125 CDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMF---------FHEVDEKEWMDI 173
                    +  I+ +        VL+NN    YP  +            +  + +  ++
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 174 VRVNLEGTTRVTKAVLTGMMRR 195
              N      + +A        
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEG 144

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 64.8 bits (157), Expect = 2e-13
 Identities = 16/144 (11%), Positives = 44/144 (30%), Gaps = 15/144 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+ G    +G             +  +    N+    S  ++  +  T+          
Sbjct: 5   VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTE--------QA 56

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           D V+A     +   +   +V  ++      +       +   K    + + ++  +T  +
Sbjct: 57  DQVTA----EVGKLLGDQKVDAILCVA-GGWAGGNAKSKSLFKNCDLMWKQSIWTSTISS 111

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAI 209
                    ++ G +   G+ AA+
Sbjct: 112 HLA--TKHLKEGGLLTLAGAKAAL 133

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 64.0 bits (155), Expect = 4e-13
 Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 17/145 (11%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TG   GIG A A +LA  G  + +  R     + +                 +    
Sbjct: 10  VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----------------FGVEV 52

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           DV  +  +     A++  +  V +           F   + E+++  ++  NL G  RV 
Sbjct: 53  DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVA 112

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAIV 210
           +     M R K G ++ IGS + + 
Sbjct: 113 QRASRSMQRNKFGRMIFIGSVSGLW 137

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 63.2 bits (152), Expect = 7e-13
 Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 7/141 (4%)

Query: 66  ALITGATDGIGKAFAHQL---AQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
            LITG   G+G      L    Q   +L    RN  + +++ +  +    ++ I+I+E D
Sbjct: 5   ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN---HSNIHILEID 61

Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTT 182
                     +  IE       + VL NN GI    A     V  +E +D ++ N     
Sbjct: 62  LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITA-VRSQELLDTLQTNTVVPI 120

Query: 183 RVTKAVLTGMMRRKKGAIVNI 203
            + KA L  + +  K      
Sbjct: 121 MLAKACLPLLKKAAKANESQP 141

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 62.9 bits (152), Expect = 1e-12
 Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 13/157 (8%)

Query: 58  NLKSYGSWALITGATD--GIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQ 115
           +L   G  AL+ G T+   +G A A +L + G  + L  +     E++  E +       
Sbjct: 5   DLS--GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQA----ERLRPEAEKLAEALG 58

Query: 116 INIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAM--FFHEVDEKEWMDI 173
             ++             + A      G  +  L++ +     +AM   + +   ++W+  
Sbjct: 59  GALLFRADVTQDEELDALFAGVKEAFG-GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLA 117

Query: 174 VRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
           + V+      V +     +   + G IV +   A+  
Sbjct: 118 LEVSAYSLVAVARRAEPLLR--EGGGIVTLTYYASEK 152

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 62.6 bits (151), Expect = 1e-12
 Identities = 23/145 (15%), Positives = 42/145 (28%), Gaps = 2/145 (1%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            +I+G   GIG A    L   G  ++ +       E I++   AE     I  V    S 
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDI--RDAEVIADLSTAEGRKQAIADVLAKCSK 61

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
            +        +      L   V +N  G T     F   + +      V ++   +  + 
Sbjct: 62  GMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLA 121

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAIV 210
                  +  + G      +     
Sbjct: 122 FDKNPLALALEAGEEAKARAIVEHA 146

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 61.8 bits (149), Expect = 2e-12
 Identities = 13/145 (8%), Positives = 44/145 (30%), Gaps = 15/145 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            ++ G    +G A      ++G  ++ +  + N     +  +              + + 
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDG------------NKNW 52

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
                  ++    ++ G +V  +       +       +   K    +++ ++  +    
Sbjct: 53  TEQEQSILEQTASSLQGSQVDGVFCVA-GGWAGGSASSKDFVKNADLMIKQSVWSSAIAA 111

Query: 186 KAVLTGMMRRKKGAIVNIGSGAAIV 210
           K        +  G +   G+ AA+ 
Sbjct: 112 KL--ATTHLKPGGLLQLTGAAAAMG 134

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 61.2 bits (148), Expect = 3e-12
 Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 23/147 (15%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
               L+  A+ GIG+A A  L+Q G  + + +RN   L++  +                 
Sbjct: 4   DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV------------- 50

Query: 123 FSCDVVSAGNIKAIEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
             CD+      K +++  + + EV +L+ N     PKA FF E+  +++ + +       
Sbjct: 51  --CDLR-----KDLDLLFEKVKEVDILVLN--AGGPKAGFFDELTNEDFKEAIDSLFLNM 101

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAA 208
            ++ +  L  M  +  G IV I S + 
Sbjct: 102 IKIVRNYLPAMKEKGWGRIVAITSFSV 128

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 61.4 bits (148), Expect = 3e-12
 Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 6/129 (4%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           AL+TGA  GIGKA A +L + G  + +   N    + +++EI     +            
Sbjct: 4   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVA------VKV 57

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           DV     + A          G  +         +     +  +    +  +N++G     
Sbjct: 58  DVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGI 117

Query: 186 KAVLTGMMR 194
           +A +    +
Sbjct: 118 QAAVEAFKK 126

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 60.6 bits (146), Expect = 6e-12
 Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 6/146 (4%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFS 124
           A++TG+T GIG   A  LA  G +++L       ++EK+   + A++    +        
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG----- 61

Query: 125 CDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRV 184
            D+     ++ +          + I              +   ++W  I+ +NL      
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHG 121

Query: 185 TKAVLTGMMRRKKGAIVNIGSGAAIV 210
           T A L  M ++  G I+NI S   +V
Sbjct: 122 TAAALPHMKKQGFGRIINIASAHGLV 147

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 59.7 bits (144), Expect = 1e-11
 Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 11/108 (10%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
            L+TGA  GIG+A     A+ G +L+ V R    L +    ++AE               
Sbjct: 8   ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEA---------IAVVA 58

Query: 126 DVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPKAMFFHEVDEKEWM 171
           DV     ++A    A++    +  + +  G+ +    +   ++  E +
Sbjct: 59  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKV 106

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 57.0 bits (136), Expect = 2e-10
 Identities = 29/142 (20%), Positives = 44/142 (30%), Gaps = 27/142 (19%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILV-SRNHNKLEKISNEIQAENPNTQINIVEY--- 121
           AL+TGA   +G++ A  L   G  + L   R+  +   +S  + A  PN+ I +      
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 122 ---------DFSCDVVSAGNIKA-IEMAIDGL-EVGVLINNVGITYPK------------ 158
                    D S  V         +           VL+NN    YP             
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 124

Query: 159 AMFFHEVDEKEWMDIVRVNLEG 180
            +   E  E    D+   N   
Sbjct: 125 CVGDREAMETATADLFGSNAIA 146

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 56.5 bits (135), Expect = 2e-10
 Identities = 19/150 (12%), Positives = 50/150 (33%), Gaps = 12/150 (8%)

Query: 66  ALITGAT--DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDF 123
            L+TG      I    A  + + G  L    +N +KL+    E  A+  +  +   +   
Sbjct: 8   ILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLQCDVAE 66

Query: 124 SCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAM---FFHEVDEKEWMDIVRVNLEG 180
              + +       E+     +    ++++G      +   + + V  + +     ++   
Sbjct: 67  DASIDTM----FAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 122

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
              + KA  + +      A++ +    A  
Sbjct: 123 FVAMAKACRSMLNPGS--ALLTLSYLGAER 150

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 51.0 bits (121), Expect = 8e-09
 Identities = 18/149 (12%), Positives = 42/149 (28%), Gaps = 19/149 (12%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           G  A++   T  +G   A  LA  G  ++L  R  +K +  ++ +             + 
Sbjct: 23  GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK----------RFK 72

Query: 123 FSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL-EGT 181
            +       +  +   A+ G     +     I          + +  W +   + +    
Sbjct: 73  VNVTAAETADDASRAEAVKG--AHFVFTAGAIG------LELLPQAAWQNESSIEIVADY 124

Query: 182 TRVTKAVLTGMMRRKKGAIVNIGSGAAIV 210
                  + G+    KG           +
Sbjct: 125 NAQPPLGIGGIDATDKGKEYGGKRAFGAL 153

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 51.2 bits (121), Expect = 1e-08
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 66  ALITGATDGIGKAFAHQLAQHG-LNLILVSRN---HNKLEKISNEIQAENPNTQINIVEY 121
            L+TG T G+G   A  LA+ G  +L+LVSR+    +   ++  E++A    T +   + 
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDV 71

Query: 122 DFSCDV 127
                V
Sbjct: 72  TDRESV 77

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 46.2 bits (108), Expect = 6e-07
 Identities = 20/141 (14%), Positives = 43/141 (30%), Gaps = 4/141 (2%)

Query: 68  ITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDV 127
           + G T  +GK  A +LA  G  +++ SR   K E  + E +    +  I  ++ + + + 
Sbjct: 5   LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEA 64

Query: 128 VSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKA 187
                +           +    +   I   K +    V           + E +     A
Sbjct: 65  CDIAVLTIPWEHA----IDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVA 120

Query: 188 VLTGMMRRKKGAIVNIGSGAA 208
            +    +          +  A
Sbjct: 121 EVLESEKVVSALHTIPAARFA 141

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 45.9 bits (107), Expect = 8e-07
 Identities = 15/115 (13%), Positives = 41/115 (35%), Gaps = 5/115 (4%)

Query: 66  ALITGA--TDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDF 123
            L++G      I    A    + G  L+L   +  +L +    I    P     +     
Sbjct: 9   ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRLPAKAPLLELDVQ 65

Query: 124 SCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL 178
           + + +++   +  E    G ++  +++++G      M  +   +  + D+ +   
Sbjct: 66  NEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIH 120

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 46.2 bits (108), Expect = 8e-07
 Identities = 18/118 (15%), Positives = 34/118 (28%), Gaps = 5/118 (4%)

Query: 66  ALITGATD--GIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDF 123
            LI G  +   I    A      G  L     N   LEK    I  E  +  +  +  D 
Sbjct: 8   GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQELNSPYVYEL--DV 64

Query: 124 SCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGT 181
           S +        +++  +  L+  V                E  +  +   + +++   
Sbjct: 65  SKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSL 122

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 43.6 bits (101), Expect = 5e-06
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 56  PKNLKSYGSWALITGA--TDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAE 110
           P +L+  G  A I G    +G G A A  LA  G  +++ +         ++  + +
Sbjct: 3   PIDLR--GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGK 57

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 43.3 bits (100), Expect = 9e-06
 Identities = 17/64 (26%), Positives = 26/64 (40%)

Query: 63  GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYD 122
           GS  L+TGA   +      QL +HG  +   +R+ +KL  +     A+ P      V  D
Sbjct: 11  GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVED 70

Query: 123 FSCD 126
               
Sbjct: 71  MLKQ 74

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 40.9 bits (94), Expect = 5e-05
 Identities = 10/59 (16%), Positives = 17/59 (28%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           LI G T  IGK   +     G    ++ R          ++          ++E     
Sbjct: 7   LIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD 65

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 40.3 bits (92), Expect = 7e-05
 Identities = 13/110 (11%), Positives = 30/110 (27%), Gaps = 2/110 (1%)

Query: 66  ALITGA--TDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDF 123
             I G   T+G G   A +L++  + +I           + N    +  N  I   +   
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64

Query: 124 SCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDI 173
           +   +   +           E         +          +  +++  I
Sbjct: 65  NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKI 114

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 39.8 bits (92), Expect = 1e-04
 Identities = 26/147 (17%), Positives = 51/147 (34%), Gaps = 21/147 (14%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSR-----NHNKLEKISNEIQAENPNTQINIVE 120
           ALITG T   G   A  L + G  +  + R     N  +++ I  +    NP    ++  
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPK--FHLHY 61

Query: 121 YDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEG 180
            D S       +   +   +  ++   + N   +++    F      +       V+  G
Sbjct: 62  GDLS-------DTSNLTRILREVQPDEVYNLGAMSHVAVSF------ESPEYTADVDAMG 108

Query: 181 TTRVTKAVLTGMMRRKKGAIVNIGSGA 207
           T R+ +A+   +   KK       +  
Sbjct: 109 TLRLLEAIRF-LGLEKKTRFYQASTSE 134

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 8e-04
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKL 100
            I GAT   G     Q  Q G  + ++ R+ ++L
Sbjct: 7   AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL 40

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 36.3 bits (82), Expect = 0.002
 Identities = 14/69 (20%), Positives = 21/69 (30%), Gaps = 1/69 (1%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISN-EIQAENPNTQINIVEYDFSC 125
           L+ GAT  IG+  A      G    L+ R           ++      +  NIV      
Sbjct: 7   LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDD 66

Query: 126 DVVSAGNIK 134
                  +K
Sbjct: 67  HASLVEAVK 75

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.0 bits (81), Expect = 0.002
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILV--SRNHNKLEKISNEIQ 108
           L+TGA+   G+    +L +     +     R+    EKI  E  
Sbjct: 7   LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD 50

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (80), Expect = 0.003
 Identities = 25/123 (20%), Positives = 38/123 (30%), Gaps = 9/123 (7%)

Query: 66  ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC 125
           ALITG T   G   A  L + G  +  + R  +       E   +NP   I         
Sbjct: 4   ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63

Query: 126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT 185
           D+  +  +  I   +             I    A    ++          V+  GT R+ 
Sbjct: 64  DLTDSTCLVKIINEVK---------PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLL 114

Query: 186 KAV 188
            AV
Sbjct: 115 DAV 117

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 35.5 bits (81), Expect = 0.003
 Identities = 15/147 (10%), Positives = 43/147 (29%), Gaps = 19/147 (12%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD 126
           LITG    IG A    + ++  + ++          + + +   + + + N    D    
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES-LSDISESNRYNFEHADIC-- 60

Query: 127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTK 186
                +   I    +  +   +++    ++                 +  N+ GT  + +
Sbjct: 61  -----DSAEITRIFEQYQPDAVMHLAAESHVDRSI------TGPAAFIETNIVGTYALLE 109

Query: 187 A-----VLTGMMRRKKGAIVNIGSGAA 208
                    G  ++      +I +   
Sbjct: 110 VARKYWSALGEDKKNNFRFHHISTDEV 136

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 35.4 bits (80), Expect = 0.004
 Identities = 7/34 (20%), Positives = 12/34 (35%)

Query: 67  LITGATDGIGKAFAHQLAQHGLNLILVSRNHNKL 100
            + GAT   G +     A  G ++     +   L
Sbjct: 7   AVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL 40

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	210
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.98
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.98
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.98
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.97
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.97
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.97
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.97
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.97
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.97
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.97
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.97
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.97
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.97
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.97
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.96
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.96
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.96
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.96
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.96
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.96
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.96
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.96
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.95
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.95
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.95
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.94
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.94
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.92
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.91
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.9
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.9
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.9
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.89
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.83
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.83
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.82
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.82
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.82
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.79
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.64
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.55
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.45
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.41
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.41
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.38
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.38
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.36
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.36
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.32
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.3
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.29
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.27
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.24
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.24
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.15
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.14
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.14
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.08
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.02
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.01
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	98.99
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.96
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.88
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.8
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.8
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.75
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.7
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.64
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.61
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.44
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.4
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.39
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.32
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.3
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.22
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.17
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.13
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.13
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	98.11
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.08
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.08
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.99
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.97
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.94
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.93
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.9
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.9
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.89
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.89
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.85
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.82
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.74
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.7
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.65
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.64
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.63
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.62
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.61
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.59
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.58
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.55
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.52
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.51
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	97.46
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.46
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.46
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.45
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.42
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.38
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	97.37
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.28
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.27
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.26
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.24
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.22
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.22
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.18
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.13
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.13
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	97.1
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.08
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.06
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.04
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.99
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.97
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.96
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.95
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.92
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.91
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.87
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.86
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.78
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.72
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.71
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.7
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.66
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.52
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.46
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.26
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.19
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.13
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.11
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.07
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.96
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.96
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.95
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.75
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.7
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.61
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.59
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.59
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.56
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	95.46
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.46
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.43
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.4
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.35
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.32
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	95.18
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.12
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.06
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.05
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.94
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.92
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.91
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.89
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.87
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.82
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.81
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	94.78
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.76
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.74
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	94.69
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.67
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.65
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	94.64
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.62
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.61
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	94.61
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.54
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	94.51
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.5
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.5
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.39
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.37
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.37
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.35
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	94.31
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.25
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.16
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.05
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	94.0
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	94.0
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	93.89
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.88
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.86
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.84
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.84
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.82
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.81
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.76
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	93.62
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.57
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.38
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	93.35
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.18
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	93.1
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	92.92
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.91
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	92.85
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	92.84
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	92.82
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.81
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	92.47
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.36
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	92.26
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.24
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	92.19
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.19
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	92.16
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	92.04
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	91.98
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	91.94
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	91.89
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	91.87
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	91.78
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.75
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	91.75
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	91.64
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	91.61
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.54
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	91.54
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.4
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	91.31
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	91.21
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	91.12
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	90.98
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	90.95
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	90.87
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	90.77
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	90.27
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.27
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	90.13
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.13
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	89.7
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.49
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	89.38
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	89.27
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	89.05
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	89.0
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	88.81
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	88.7
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.54
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	88.39
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	88.28
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	88.0
d2h00a1	250	Methyltransferase 10 domain containing protein MET	87.89
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	87.87
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	87.69
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	87.6
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	87.58
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	86.95
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	86.93
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	86.83
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	86.78
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	86.55
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.18
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	86.09
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	85.81
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	85.65
d1knxa2	177	HPr kinase HprK C-terminal domain {Mycoplasma pneu	85.58
d1ko7a2	169	HPr kinase HprK C-terminal domain {Staphylococcus	85.49
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	85.1
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	85.0
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	84.99
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	84.75
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	84.7
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	84.6
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	84.52
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	84.46
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	84.39
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	84.18
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	83.92
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	83.84
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	83.69
d1kkma_	176	HPr kinase HprK C-terminal domain {Lactobacillus c	83.68
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	83.44
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	82.67
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	82.66
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	82.5
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	82.5
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	82.5
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	82.46
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	82.07
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	81.82
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	81.44
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.31
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	81.31
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	81.08
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	81.01
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	80.73
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	80.36
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	80.31

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=4.1e-35  Score=232.58  Aligned_cols=147  Identities=25%  Similarity=0.302  Sum_probs=136.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+..++.++..+++|++++++.++.++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            35699999999999999999999999999999999999999999999988877888999999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||+..+. .++.+.+.|+|+++|++|+.|+++++|+++|+|++++.|+|||+||.++.
T Consensus        81 ~G--~iDiLVnnAG~~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~  147 (258)
T d1iy8a_          81 FG--RIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGI  147 (258)
T ss_dssp             HS--CCSEEEECCCCCCCC-BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             hC--CCCEEEECCcccccC-CchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhc
Confidence            98  699999999986542 34789999999999999999999999999999999999999999999875

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-35  Score=229.28  Aligned_cols=145  Identities=26%  Similarity=0.363  Sum_probs=133.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .++.||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++..+.+|++++++.++.++++.+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            4577999999999999999999999999999999999999999999999875  56788999999999998998999988


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++  ++|++|||||.....+  +.+.+.++|++++++|+.|++++++.++|+|++++.|+||++||.+|.
T Consensus        81 ~~g--~idilinnag~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~  147 (244)
T d1yb1a_          81 EIG--DVSILVNNAGVVYTSD--LFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGH  147 (244)
T ss_dssp             HTC--CCSEEEECCCCCCCCC--CGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-C
T ss_pred             HcC--CCceeEeecccccccc--ccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhc
Confidence            888  6999999999987755  778899999999999999999999999999999999999999999885

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.2e-34  Score=228.97  Aligned_cols=144  Identities=23%  Similarity=0.341  Sum_probs=132.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+ +.++.++++|++++++.++.++++.++
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5679999999999999999999999999999999999999999998887654 567888999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++  ++|+||||||+....+  +.+.+.|+|+++|++|+.|+++++|+++|+|++++.|+||+++|.++
T Consensus        81 ~g--~iDiLVnnAG~~~~~~--~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~  145 (251)
T d1vl8a_          81 FG--KLDTVVNAAGINRRHP--AEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTV  145 (251)
T ss_dssp             HS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGG
T ss_pred             cC--CCCEEEECCCCCCCCC--hhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchh
Confidence            88  6999999999876644  88999999999999999999999999999999999999999999765

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.9e-34  Score=228.87  Aligned_cols=147  Identities=21%  Similarity=0.327  Sum_probs=134.3

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      +++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.+..++++|++++++.++.++++.
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999876  5678889999999988888888887


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++++. ++|++|||||.....+  +.+.+.|+|+++|++|+.|+++++|.++|+|++++.|+||++||.++.
T Consensus        81 ~~~~~-~idilvnnAG~~~~~~--~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~  149 (259)
T d2ae2a_          81 NHFHG-KLNILVNNAGIVIYKE--AKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA  149 (259)
T ss_dssp             HHTTT-CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGT
T ss_pred             HHhCC-CceEEEECCceeccCc--cccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccc
Confidence            77764 6999999999877654  889999999999999999999999999999999999999999999875

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.6e-34  Score=227.59  Aligned_cols=147  Identities=26%  Similarity=0.331  Sum_probs=135.0

Q ss_pred             CCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           56 PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        56 ~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      ..+++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++++|++++++.++.+++
T Consensus         4 ~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~--g~~~~~~~~Dvs~~~~~~~~~~~   81 (255)
T d1fmca_           4 SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADF   81 (255)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHH
Confidence            3467788999999999999999999999999999999999999999999999876  55788899999999888888899


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.+.++  ++|+||||||...+.+  + +.++|+|++++++|+.|+++++|.++|+|++++.|+||++||.++.
T Consensus        82 ~~~~~g--~iDilvnnAG~~~~~~--~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~  150 (255)
T d1fmca_          82 AISKLG--KVDILVNNAGGGGPKP--F-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE  150 (255)
T ss_dssp             HHHHHS--SCCEEEECCCCCCCCC--T-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HHHHcC--CCCEeeeCCcCCCCCc--c-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchh
Confidence            999988  6999999999876643  4 7899999999999999999999999999999999999999999875

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.7e-34  Score=227.93  Aligned_cols=148  Identities=21%  Similarity=0.266  Sum_probs=127.1

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ++++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++..+.+|++++.+.++.++++
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   79 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTV   79 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHH
Confidence            356778999999999999999999999999999999999999999999999876  457899999999998888888888


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+++++ ++|+||||||...+.+  +.+.+.|+|++++++|+.|+++++|+++|+|++++.|+||++||.++.
T Consensus        80 ~~~~~g-~idilvnnAG~~~~~~--~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~  149 (259)
T d1xq1a_          80 SSMFGG-KLDILINNLGAIRSKP--TLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGV  149 (259)
T ss_dssp             HHHHTT-CCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----
T ss_pred             HHHhCC-CcccccccccccCCCc--hhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccc
Confidence            888843 6999999999987654  889999999999999999999999999999999999999999999875

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.1e-34  Score=226.62  Aligned_cols=140  Identities=31%  Similarity=0.500  Sum_probs=128.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++||+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.+...+.+|++++++.++.++++.+++
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCCcEEEEEecCHHHhhhhhhhhhccc
Confidence            56999999999999999999999999999999999999999988877     3456788999999988888889998888


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||.....+  +.+.+.|+|+++|++|+.|+++++|+++|+|++++.|+|||+||.+|.
T Consensus        77 g--~iDilVnnAg~~~~~~--~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~  141 (243)
T d1q7ba_          77 G--EVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGT  141 (243)
T ss_dssp             C--SCSEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             C--Ccceehhhhhhccccc--cccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhc
Confidence            7  6999999999987655  889999999999999999999999999999999999999999998764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=4.4e-34  Score=226.90  Aligned_cols=145  Identities=26%  Similarity=0.376  Sum_probs=133.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++..+++|++++++.++.++++.++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            356999999999999999999999999999999999999999999999775  567889999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.... ..++.+.+.|+|++++++|+.++++++|+++|+|++++.|+||++||.+|.
T Consensus        80 ~g--~iDilVnnaG~~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~  146 (260)
T d1zema1          80 FG--KIDFLFNNAGYQGA-FAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGV  146 (260)
T ss_dssp             HS--CCCEEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             hC--CCCeehhhhccccc-cCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhc
Confidence            88  69999999998654 234889999999999999999999999999999999999999999998874

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=3.2e-34  Score=227.76  Aligned_cols=144  Identities=26%  Similarity=0.404  Sum_probs=131.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~-~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++||+++||||++|||+++|++|+++|++|++++|+ ++.++++.+++.+.+ +.++.++++|++++++.++.++++.+.
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            469999999999999999999999999999999997 567888888886654 567889999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.|+|+++|++|+.|+++++|+++|+|++++.|+||++||.+|.
T Consensus        81 ~G--~iDiLVnnAG~~~~~~--~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~  146 (260)
T d1x1ta1          81 MG--RIDILVNNAGIQHTAL--IEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL  146 (260)
T ss_dssp             HS--CCSEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             hC--CCcEEEeecccccCCc--hhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce
Confidence            98  6999999999987654  889999999999999999999999999999999999999999999875

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.4e-34  Score=225.75  Aligned_cols=145  Identities=28%  Similarity=0.395  Sum_probs=133.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +.+.+|+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++..+++|++++++.++.++++.+
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~   83 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILT   83 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999999999999999999775  55788999999999888888899988


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +++  ++|+||||||.....+  +.+.+.++|++++++|+.|+++++|+++|+|++++.|+|||+||.+|.
T Consensus        84 ~~g--~iDilvnnag~~~~~~--~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~  150 (251)
T d2c07a1          84 EHK--NVDILVNNAGITRDNL--FLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGL  150 (251)
T ss_dssp             HCS--CCCEEEECCCCCCCCC--TTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHH
T ss_pred             hcC--Cceeeeeccccccccc--cccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhc
Confidence            887  6999999999877654  779999999999999999999999999999999999999999999874

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.5e-34  Score=224.17  Aligned_cols=141  Identities=23%  Similarity=0.357  Sum_probs=129.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.+..++++|++++++.++.++++.+.
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVTA   77 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            356999999999999999999999999999999999999998887776     346778899999999999989999998


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.|+|+++|++|+.|+++++|.++|.|++++.|+||++||.+|.
T Consensus        78 ~g--~idilinnAG~~~~~~--~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~  143 (244)
T d1nffa_          78 FG--GLHVLVNNAGILNIGT--IEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGL  143 (244)
T ss_dssp             HS--CCCEEEECCCCCCCBC--TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             hC--CCeEEEECCcccCCCc--hhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccc
Confidence            88  6999999999877654  889999999999999999999999999999999999999999999875

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=6.2e-34  Score=224.93  Aligned_cols=143  Identities=29%  Similarity=0.402  Sum_probs=130.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++..   +.++.++++|++++.+.++.++++.+.
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            36699999999999999999999999999999999999999988888743   457888999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCC-EEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKG-AIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g-~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.|+|+++|++|+.|+++++|+++|+|++++.| +||++||.+|.
T Consensus        80 ~G--~iDiLVnnAg~~~~~~--~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~  146 (251)
T d1zk4a1          80 FG--PVSTLVNNAGIAVNKS--VEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF  146 (251)
T ss_dssp             HS--SCCEEEECCCCCCCCC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT
T ss_pred             hC--CceEEEeccccccccc--hhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecccee
Confidence            98  6999999999987654  8899999999999999999999999999999988865 89999999875

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=6.1e-34  Score=225.15  Aligned_cols=141  Identities=23%  Similarity=0.292  Sum_probs=129.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++++|++++++.++.++++.++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            356999999999999999999999999999999999999888776665     457889999999999999999999998


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.|+|++++++|+.|+++++|+++|+|++++.|+||++||.++.
T Consensus        77 ~g--~iDilVnnAg~~~~~~--~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~  142 (254)
T d1hdca_          77 FG--SVDGLVNNAGISTGMF--LETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGL  142 (254)
T ss_dssp             HS--CCCEEEECCCCCCCSC--GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             cC--CccEEEecCccccccc--cccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhc
Confidence            88  6999999999987654  889999999999999999999999999999999999999999999875

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-33  Score=221.17  Aligned_cols=146  Identities=27%  Similarity=0.385  Sum_probs=135.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+++.++.++++|++++++.++.++.+.++
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            47799999999999999999999999999999999999999999999998876788999999999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC--CCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK--KGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~--~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||...+.+  +.+.++++|++.+++|+.|++++++.++|.|++++  +|+||++||.+|.
T Consensus        87 ~g--~iD~lVnnAg~~~~~~--~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~  154 (257)
T d1xg5a_          87 HS--GVDICINNAGLARPDT--LLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGH  154 (257)
T ss_dssp             HC--CCSEEEECCCCCCCCC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGT
T ss_pred             cC--CCCEEEecccccCCCc--cccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhc
Confidence            98  6999999999887654  88999999999999999999999999999998765  6999999998874

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.5e-33  Score=222.22  Aligned_cols=141  Identities=24%  Similarity=0.327  Sum_probs=125.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++||+++||||++|||+++|++|+++|++|++++|++++.  ..+++++.  +.++..+++|++++.+.++.++++.+++
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   78 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVISTF   78 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5699999999999999999999999999999999987532  23344443  5678899999999999999899999998


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||+....+  +.+.+.|+|+++|++|+.|+++++|+++|+|++++.|+|||+||.+|.
T Consensus        79 G--~iDilVnnAG~~~~~~--~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~  143 (247)
T d2ew8a1          79 G--RCDILVNNAGIYPLIP--FDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYW  143 (247)
T ss_dssp             S--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG
T ss_pred             C--CCCEEEECCCCCCCCC--hHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhc
Confidence            8  6999999999976644  889999999999999999999999999999999999999999999875

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.3e-33  Score=223.92  Aligned_cols=142  Identities=32%  Similarity=0.451  Sum_probs=130.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++++|++++++.++.++++.++++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3899999999999999999999999999999999999999999999876  56788999999999999998999998887


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHH--hHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTG--MMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~--m~~~~~g~iv~isS~ag~  209 (210)
                        ++|+||||||.....+  +.+.+.|+|+++|++|+.|+++++|+++|+  |++++.|+||+++|.++.
T Consensus        79 --~iDilVnnAG~~~~~~--~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~  144 (257)
T d2rhca1          79 --PVDVLVNNAGRPGGGA--TAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK  144 (257)
T ss_dssp             --SCSEEEECCCCCCCSC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGT
T ss_pred             --CCCEEEecccccCCCC--hHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccc
Confidence              6999999999887654  889999999999999999999999999997  567778999999999875

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.6e-33  Score=221.07  Aligned_cols=140  Identities=33%  Similarity=0.376  Sum_probs=130.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCe-------EEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLN-------LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~-------Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ++++||||++|||+++|++|+++|++       |++++|++++++++.+++++.  +.+..++++|++++.+.++.++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            57899999999999999999999998       999999999999999999875  567889999999998899988999


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++++  ++|+||||||.....+  +.+.+.|+|+++|++|+.|+++++|+++|+|++++.|+||++||.+|.
T Consensus        80 ~~~~g--~iDilvnnAg~~~~~~--~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~  148 (240)
T d2bd0a1          80 VERYG--HIDCLVNNAGVGRFGA--LSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT  148 (240)
T ss_dssp             HHHTS--CCSEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HHHcC--CcceeecccccccCCc--cccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhc
Confidence            98888  6999999999987654  889999999999999999999999999999999999999999999875

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=2.7e-33  Score=223.23  Aligned_cols=145  Identities=21%  Similarity=0.318  Sum_probs=131.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++..   ...+.++++|++++++.++.++++.+.
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999999999888854   345778899999999999989999988


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+..+.+.+.|+|++++++|+.|+++++|+++|+|++++.|+||++||.++.
T Consensus        80 ~g--~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~  147 (268)
T d2bgka1          80 HG--KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSF  147 (268)
T ss_dssp             HS--CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGT
T ss_pred             cC--CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccc
Confidence            88  699999999987765555778999999999999999999999999999999999999999998875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=4.7e-33  Score=220.93  Aligned_cols=144  Identities=19%  Similarity=0.347  Sum_probs=129.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~-~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+. +.++++.+++++.  +.++..+++|++++++.++.++++.+
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999985 5678888888775  56788999999999999998999999


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCC-EEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKG-AIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g-~iv~isS~ag~  209 (210)
                      +++  ++|+||||||...+.+  +.+.+.|+|++++++|+.|+++++|+++|+|++++.| +||++||.++.
T Consensus        82 ~~G--~iDiLVnnAG~~~~~~--~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~  149 (261)
T d1geea_          82 EFG--KLDVMINNAGLENPVS--SHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK  149 (261)
T ss_dssp             HHS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT
T ss_pred             HhC--CCCEeeccceecCCcc--hhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhc
Confidence            888  6999999999987654  8899999999999999999999999999999988755 59999999875

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=3.4e-33  Score=220.82  Aligned_cols=140  Identities=21%  Similarity=0.325  Sum_probs=127.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.+..++++|++++.+.++.++++.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999999999888877     446778889999998888888999988


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||...+.+  +.+.+.|+|+++|++|+.|+++++|+++|+|+++ +|+|||+||.+|.
T Consensus        78 ~g--~iDilVnnAG~~~~~~--~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~  142 (253)
T d1hxha_          78 LG--TLNVLVNNAGILLPGD--METGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSW  142 (253)
T ss_dssp             HC--SCCEEEECCCCCCCBC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGT
T ss_pred             hC--CCCeEEecccccCCCC--cccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhh
Confidence            87  6999999999977644  8899999999999999999999999999999765 5999999999875

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=4.8e-33  Score=220.39  Aligned_cols=141  Identities=23%  Similarity=0.345  Sum_probs=128.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.+...+++|++++++.++.++++.++
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~~   76 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLDR   76 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999999999888776     456788999999999999999999998


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.....+  +.+.+.|+|++++++|+.|+++++|+++|.|+++ +.|+||++||.++.
T Consensus        77 ~g--~iDilVnnAg~~~~~~--~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  143 (256)
T d1k2wa_          77 WG--SIDILVNNAALFDLAP--IVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGR  143 (256)
T ss_dssp             HS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             hC--CccEEEeecccccccc--cccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhc
Confidence            88  6999999999887654  8899999999999999999999999999987665 46999999999875

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=6.7e-33  Score=219.45  Aligned_cols=140  Identities=22%  Similarity=0.330  Sum_probs=128.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++++|++++++.++.++++.++++  
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--   77 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLG--   77 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTT--
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHhC--
Confidence            78999999999999999999999999999999999999999999876  56788899999999999998999998888  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGSGAAI  209 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS~ag~  209 (210)
                      ++|+||||||+....+  +.+.++|+|++++++|+.|+++++|+++|+|++++ .|+|+++||.++.
T Consensus        78 ~iDilVnnAG~~~~~~--~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~  142 (255)
T d1gega_          78 GFDVIVNNAGVAPSTP--IESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH  142 (255)
T ss_dssp             CCCEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             CccEEEecccccccCc--HHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhc
Confidence            6999999999876644  88999999999999999999999999999887765 5789999999875

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=6e-33  Score=218.34  Aligned_cols=140  Identities=29%  Similarity=0.430  Sum_probs=127.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~-r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      ++++||||++|||+++|++|+++|++|++.+ |+++.++++.+++++.  +.++.++++|++++++.++.++++.++++ 
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   78 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWG-   78 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSS-
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcC-
Confidence            5899999999999999999999999999875 5777889888888876  56888999999999888888899988887 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|+||||||.....+  +.+.+.|+|+++|++|+.|+++++|+++|+|++++.|+|||+||.+|.
T Consensus        79 -~iDiLVnnAg~~~~~~--~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~  142 (244)
T d1edoa_          79 -TIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGL  142 (244)
T ss_dssp             -CCSEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH
T ss_pred             -CCCccccccccccccc--hhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhc
Confidence             6999999999987654  889999999999999999999999999999999999999999999874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=9.5e-33  Score=217.63  Aligned_cols=137  Identities=26%  Similarity=0.374  Sum_probs=122.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++||+++||||++|||+++|++|+++|++|++++|+++..+ ..+++       ...++++|++++.+.++.++++.+.+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~~   74 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-------GGAFFQVDLEDERERVRFVEEAAYAL   74 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-------TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-------CCeEEEEeCCCHHHHHHHHHHHHHhc
Confidence            56999999999999999999999999999999999987643 33332       23467899999988899899999998


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||...+.+  +.+.++|+|+++|++|+.|+++++|+++|+|++++.|+||++||.++.
T Consensus        75 G--~iDiLVnnAG~~~~~~--~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~  139 (248)
T d2d1ya1          75 G--RVDVLVNNAAIAAPGS--ALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL  139 (248)
T ss_dssp             S--CCCEEEECCCCCCCBC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGT
T ss_pred             C--CCCeEEEeCcCCCCCC--hhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccc
Confidence            8  6999999999987654  889999999999999999999999999999999999999999999875

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-32  Score=217.23  Aligned_cols=140  Identities=18%  Similarity=0.300  Sum_probs=124.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++      .+..++.+|++++++.++.++++.+.
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~------~~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIRR   76 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEccCCCHHHHHHHHHHHHHh
Confidence            456999999999999999999999999999999999999888776654      24678899999999999989999998


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||.... ..++.+.+.|+|+++|++|+.|+++++|+++|+|+++ +|+||++||.++.
T Consensus        77 ~g--~iDilVnnAG~~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~  142 (250)
T d1ydea1          77 FG--RLDCVVNNAGHHPP-PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGA  142 (250)
T ss_dssp             HS--CCCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHH
T ss_pred             cC--CCCEEEeccccccc-ccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCccccccccc
Confidence            88  69999999997643 2347789999999999999999999999999999876 4999999998764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=2.6e-32  Score=216.30  Aligned_cols=146  Identities=22%  Similarity=0.348  Sum_probs=134.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +..+.++.+|++++++.++.++++.+
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~   79 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAH   79 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeecCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999999999999999876  56778889999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+++ ++|+||||||.....+  +.+++.++|++++++|+.++++++|+++|.|.+++.|+||++||.++.
T Consensus        80 ~~~g-~idilinnag~~~~~~--~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~  147 (258)
T d1ae1a_          80 VFDG-KLNILVNNAGVVIHKE--AKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGF  147 (258)
T ss_dssp             HTTS-CCCEEEECCCCCCCCC--TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGT
T ss_pred             HhCC-CcEEEeccccccccCc--cccCCHHHHhhhhhhccccccccccccccccccccccccccccccccc
Confidence            8754 6999999999987654  889999999999999999999999999999999999999999999875

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.5e-32  Score=218.27  Aligned_cols=148  Identities=19%  Similarity=0.283  Sum_probs=133.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+. ..++.++.+|++++.+.++.++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            35699999999999999999999999999999999999999999999987643 45789999999999999999999999


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +++  ++|++|||||.....+....+.+.|+|++++++|+.|+++++|+++|+|++++.|+|+++||.++.
T Consensus        81 ~~G--~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~  149 (274)
T d1xhla_          81 KFG--KIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGP  149 (274)
T ss_dssp             HHS--CCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSS
T ss_pred             HcC--CceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcc
Confidence            988  699999999987665545667899999999999999999999999999999998999999988764

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.98  E-value=2.6e-32  Score=220.79  Aligned_cols=143  Identities=25%  Similarity=0.435  Sum_probs=124.7

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC---------hhHHHHHHHHHHhhCCCceeEEEEEecccCcc
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN---------HNKLEKISNEIQAENPNTQINIVEYDFSCDVV  128 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~---------~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~  128 (210)
                      +++++||+++||||++|||+++|++|+++|++|++++|+         ++.++++.+++....     ....+|+++..+
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~   76 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG-----GKAVANYDSVEA   76 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT-----CEEEEECCCGGG
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc-----cccccccchHHH
Confidence            466779999999999999999999999999999998764         456777777776542     335678888878


Q ss_pred             chhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          129 SAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .++.++++.+.++  ++|+||||||+..+.+  +.+.+.|+|++++++|+.|+++++|+++|+|++++.|+|||+||.+|
T Consensus        77 ~~~~v~~~~~~~G--~iDiLVnNAGi~~~~~--~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~  152 (302)
T d1gz6a_          77 GEKLVKTALDTFG--RIDVVVNNAGILRDRS--FSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG  152 (302)
T ss_dssp             HHHHHHHHHHHTS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHHHHHHHHHHcC--CCCEEEECCccCCCCC--hhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhh
Confidence            8888888888887  6999999999987654  89999999999999999999999999999999999999999999886


Q ss_pred             c
Q 045749          209 I  209 (210)
Q Consensus       209 ~  209 (210)
                      .
T Consensus       153 ~  153 (302)
T d1gz6a_         153 I  153 (302)
T ss_dssp             H
T ss_pred             c
Confidence            4

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.98  E-value=4.7e-32  Score=212.93  Aligned_cols=137  Identities=23%  Similarity=0.321  Sum_probs=123.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++       +..++++|++++++.++.++++.++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~   74 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALAH   74 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHHh
Confidence            467999999999999999999999999999999999999888776543       3467889999999999999999999


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      ++  ++|+||||||+..+.+  +.+.+.|+|++++++|+.|+++++|+++|+|++++.++|+++||.+
T Consensus        75 ~g--~iDilVnnAG~~~~~~--~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~  138 (242)
T d1ulsa_          75 LG--RLDGVVHYAGITRDNF--HWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV  138 (242)
T ss_dssp             HS--SCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG
T ss_pred             cC--CceEEEECCcccccCc--hhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccc
Confidence            88  6999999999887654  8899999999999999999999999999999999888999888864

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.98  E-value=3.6e-32  Score=212.95  Aligned_cols=133  Identities=26%  Similarity=0.369  Sum_probs=117.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++++             ..++..+++|++++++.++.++++.++
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------CTTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-------------hcCceEEEEecCCHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999998754             234567899999998888889999998


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||+..+.+  +.+.+.|+|+++|++|+.++++++|.++|+|++++.|+|||+||.++.
T Consensus        71 ~g--~iDiLVnnAG~~~~~~--~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~  136 (237)
T d1uzma1          71 QG--PVEVLVSNAGLSADAF--LMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL  136 (237)
T ss_dssp             HS--SCSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-
T ss_pred             cC--CceEEEeeeccccccc--HhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhc
Confidence            88  6999999999876644  889999999999999999999999999999999999999999999875

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.4e-31  Score=216.05  Aligned_cols=144  Identities=27%  Similarity=0.443  Sum_probs=131.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCC---CceeEEEEEecccCccchhhHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENP---NTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..++++...+   +.++..+++|++++++.++.++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            46699999999999999999999999999999999999999999999986532   567899999999999999989999


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      .+.++  ++|+||||||.....+  +.+.+.|+|++++++|+.|+++++|+++|.|++++.|+||++||..
T Consensus        89 ~~~~G--~iDiLVnnAg~~~~~~--~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~  155 (297)
T d1yxma1          89 LDTFG--KINFLVNNGGGQFLSP--AEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT  155 (297)
T ss_dssp             HHHHS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC
T ss_pred             HHHhC--CeEEEEeeccccccCc--hhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccc
Confidence            88888  6999999999876654  8899999999999999999999999999999999999999997754

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.97  E-value=9.9e-32  Score=213.25  Aligned_cols=148  Identities=22%  Similarity=0.333  Sum_probs=131.0

Q ss_pred             CCCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           56 PKNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        56 ~~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      ..+++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.. +.++..+++|++++++.++.+++
T Consensus         2 ~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~   80 (260)
T d1h5qa_           2 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQ   80 (260)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHH
Confidence            34567889999999999999999999999999999999999999999888886654 56788999999999999998999


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEeccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGSGAA  208 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS~ag  208 (210)
                      +.++++  ++|+||||||.....+  +.+.+.|+|++++++|+.|+++++|.++|+|+++ ..|+|++++|..+
T Consensus        81 ~~~~~g--~iDilVnnAg~~~~~~--~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~  150 (260)
T d1h5qa_          81 IDADLG--PISGLIANAGVSVVKP--ATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSS  150 (260)
T ss_dssp             HHHHSC--SEEEEEECCCCCCCSC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             HHHHhC--CCcEecccccccccCC--HHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccc
Confidence            988887  7999999999976654  8899999999999999999999999999998654 5677888887654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.97  E-value=1.1e-31  Score=213.53  Aligned_cols=146  Identities=25%  Similarity=0.358  Sum_probs=121.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhC-CCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN-PNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.. +..++..+++|++++.+.++.++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999999999999998764 345789999999999999998999999


Q ss_pred             HhcCCCccEEEEcCCCCCCCc--ccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKA--MFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +++  ++|+||||||...+..  ..+.+.+.|+|+++|++|+.|+++++|+++|+|++++ |++|+++|.++
T Consensus        82 ~~g--~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~  150 (264)
T d1spxa_          82 KFG--KLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIAS  150 (264)
T ss_dssp             HHS--CCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTS
T ss_pred             HhC--CCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeecc
Confidence            988  6999999999865422  2355679999999999999999999999999998775 66666666543

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.97  E-value=1.4e-31  Score=213.65  Aligned_cols=146  Identities=27%  Similarity=0.361  Sum_probs=125.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhC-CCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN-PNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.. ++.++..+++|++++++.++.++++.++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            569999999999999999999999999999999999999999999998763 3467899999999999999989999999


Q ss_pred             hcCCCccEEEEcCCCCCCCc--ccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecc-cccc
Q 045749          140 IDGLEVGVLINNVGITYPKA--MFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGS-GAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS-~ag~  209 (210)
                      ++  ++|+||||||...+.+  ....+.+.++|++++++|+.|+++++|+++|+|++++ |++|+++| .++.
T Consensus        83 ~g--~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~  152 (272)
T d1xkqa_          83 FG--KIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGP  152 (272)
T ss_dssp             HS--CCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSS
T ss_pred             hC--CceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-Cccccccchhccc
Confidence            88  6999999999876543  1234678889999999999999999999999998876 55555555 4543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.3e-32  Score=215.98  Aligned_cols=138  Identities=22%  Similarity=0.267  Sum_probs=124.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      ++++||||++|||+++|++|+++ |++|++++|++++++++.+++++.  +.++.++++|+++..+.++.++++.++++ 
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g-   80 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEYG-   80 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEEecCCHHHHHHHHHHHHHhcC-
Confidence            56699999999999999999986 899999999999999999999887  45678899999999999999999999887 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       ++|+||||||+..+.+  ..+.+.++|+++|++|++|+++++|.++|.|++  .|+|||+||+++.
T Consensus        81 -~iDiLVnNAGi~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~  142 (275)
T d1wmaa1          81 -GLDVLVNNAGIAFKVA--DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSV  142 (275)
T ss_dssp             -SEEEEEECCCCCCCTT--CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHH
T ss_pred             -CcEEEEEcCCcCCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCccccccccee
Confidence             6999999999987644  667788999999999999999999999999954  4899999998763

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=2.1e-31  Score=211.18  Aligned_cols=149  Identities=24%  Similarity=0.315  Sum_probs=130.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHH---cCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQ---HGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~---~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      +.||+++||||++|||+++|++|++   +|++|++++|++++++++.+++...+++.++.++++|++++++.++.++.+.
T Consensus         4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~   83 (259)
T d1oaaa_           4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            5699999999999999999999997   7999999999999999999999988888899999999999977777777766


Q ss_pred             HHhc--CCCccEEEEcCCCCCCC-cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC--CCEEEEecccccc
Q 045749          138 MAID--GLEVGVLINNVGITYPK-AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK--KGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~--~~~id~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~--~g~iv~isS~ag~  209 (210)
                      +...  ..++|++|||||...+. ..++.+.+.++|+++|++|+.|+++++|+++|+|++++  .|+||++||.+|.
T Consensus        84 ~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~  160 (259)
T d1oaaa_          84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL  160 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred             HhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc
Confidence            5332  23799999999986532 34577899999999999999999999999999998876  5899999999875

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.97  E-value=4.7e-31  Score=211.00  Aligned_cols=142  Identities=18%  Similarity=0.293  Sum_probs=123.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.++..+.+|++++++.++.++++.++
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVAR   76 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999999988877665     457888999999998888888999998


Q ss_pred             hcCCCccEEEEcCCCCCCCcc---cccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAM---FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ++  ++|++|||||+......   ...+.++++|+++|++|+.|+++++|+++|+|++++ |+||+++|.+|.
T Consensus        77 ~g--~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~  146 (276)
T d1bdba_          77 FG--KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGF  146 (276)
T ss_dssp             HS--CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGT
T ss_pred             hC--CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhc
Confidence            88  69999999998654322   224455678999999999999999999999998875 899999998875

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-30  Score=205.41  Aligned_cols=138  Identities=28%  Similarity=0.389  Sum_probs=118.1

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ++.++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.      .+..+.+|++++    +.++++.
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~------~~~~~~~Dv~d~----~~v~~~~   71 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP------GIEPVCVDLGDW----EATERAL   71 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST------TCEEEECCTTCH----HHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC------CCeEEEEeCCCH----HHHHHHH
Confidence            356789999999999999999999999999999999999999888776642      356678888776    4455666


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh-CCCCEEEEecccccc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR-RKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~-~~~g~iv~isS~ag~  209 (210)
                      ++++  ++|+||||||.....+  +.+.+.|+|++++++|+.++++++|.++|+|.+ ++.|+||++||.++.
T Consensus        72 ~~~g--~iDilVnnAg~~~~~~--~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~  140 (244)
T d1pr9a_          72 GSVG--PVDLLVNNAAVALLQP--FLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ  140 (244)
T ss_dssp             TTCC--CCCEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             HHhC--CceEEEeccccccccc--hhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccc
Confidence            6665  7999999999987654  889999999999999999999999999997654 567999999999875

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=8.8e-31  Score=205.62  Aligned_cols=136  Identities=29%  Similarity=0.378  Sum_probs=116.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++      ..+..+.+|++++    +.++++.++
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~~~----~~v~~~~~~   71 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDW----DATEKALGG   71 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCH----HHHHHHHTT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCH----HHHHHHHHH
Confidence            467999999999999999999999999999999999999888776654      2356778888876    345556666


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS~ag~  209 (210)
                      ++  ++|+||||||+....+  +.+.++++|++++++|+.|+++++|.++|.|+++ ++|+||++||.++.
T Consensus        72 ~g--~iDilVnnAg~~~~~~--~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~  138 (242)
T d1cyda_          72 IG--PVDLLVNNAALVIMQP--FLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH  138 (242)
T ss_dssp             CC--CCSEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             cC--CCeEEEECCccccchh--HHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcc
Confidence            65  7999999999877654  8899999999999999999999999999987654 56899999999874

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-30  Score=205.55  Aligned_cols=136  Identities=25%  Similarity=0.375  Sum_probs=124.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+..++.++.++++|++++.+.++.++++.++++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            59999999999999999999999999999999999999999999998877678899999999999999999999999988


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC---CCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK---KGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~---~g~iv~isS~ag~  209 (210)
                        ++|+||||||....          ++|++++++|+.+++++++.++|+|.+++   .|+||++||.+|.
T Consensus        82 --~iDilVnnAg~~~~----------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~  140 (254)
T d2gdza1          82 --RLDILVNNAGVNNE----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL  140 (254)
T ss_dssp             --CCCEEEECCCCCCS----------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred             --CcCeeccccccccc----------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc
Confidence              69999999997532          35889999999999999999999998765   4789999999875

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-29  Score=202.38  Aligned_cols=143  Identities=20%  Similarity=0.228  Sum_probs=126.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++||+++|||||+|||+++|++|+++|++|++++|++++++++.+++.... +.......+|.+++.......+.+.+..
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            679999999999999999999999999999999999999999999887764 5677788888887766666666777777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  .+|+++||||.....+  +.+.+.|+|++++++|+.|++++++.++|+|+++ +|+||++||.+|.
T Consensus        91 g--~~~~li~nag~~~~~~--~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~  154 (269)
T d1xu9a_          91 G--GLDMLILNHITNTSLN--LFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGK  154 (269)
T ss_dssp             T--SCSEEEECCCCCCCCC--CCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGT
T ss_pred             C--Cccccccccccccccc--cccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhc
Confidence            6  6899999999877644  7788999999999999999999999999999754 6999999999875

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.96  E-value=8.4e-30  Score=201.34  Aligned_cols=137  Identities=26%  Similarity=0.361  Sum_probs=117.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCc-cchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDV-VSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~  138 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++.++. ++++...++.++.++.+|++++. +.++.++++.+
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            56799999999999999999999999999999999987776554 45666666789999999998653 56677888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC---CCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK---KGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~---~g~iv~isS~ag~  209 (210)
                      +++  ++|+||||||..          ++++|++++++|++|+++++++++|.|.+++   .|+||++||.+|+
T Consensus        81 ~~g--~iDilvnnAG~~----------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~  142 (254)
T d1sbya1          81 QLK--TVDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF  142 (254)
T ss_dssp             HHS--CCCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred             HcC--CCCEEEeCCCCC----------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc
Confidence            887  699999999953          4577999999999999999999999997763   5899999999885

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.96  E-value=1.7e-29  Score=198.98  Aligned_cols=143  Identities=24%  Similarity=0.300  Sum_probs=120.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHH---HcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLA---QHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~---~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      -|+++||||++|||+++|++|+   ++|++|++++|++++++++.+ +.+.  ..++.++++|++++++.++.++.+.+.
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKN--HSNIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHH--CTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhc--CCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence            3789999999999999999996   579999999999999887754 4333  457889999999998888888877654


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-----------CCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-----------KKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-----------~~g~iv~isS~ag  208 (210)
                      ....++|+||||||+.... ..+.+.+.++|++++++|+.|++++++.++|+|+++           +.|++|+++|.+|
T Consensus        79 ~~~~~iDiLvnNAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g  157 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAPKS-ARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG  157 (248)
T ss_dssp             HGGGCCSEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred             hhcCCcceEEeeccccccC-cccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccc
Confidence            3333799999999986653 336788999999999999999999999999999874           4689999999987


Q ss_pred             c
Q 045749          209 I  209 (210)
Q Consensus       209 ~  209 (210)
                      .
T Consensus       158 ~  158 (248)
T d1snya_         158 S  158 (248)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.96  E-value=1.4e-29  Score=199.88  Aligned_cols=134  Identities=18%  Similarity=0.154  Sum_probs=118.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      +++||||++|||+++|++|+++|++|++++|+.++++++.+... .+       .++|++++.+.++.++++.++++  +
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~-~~-------~~~dv~~~~~~~~~~~~~~~~~G--~   71 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE-TY-------PQLKPMSEQEPAELIEAVTSAYG--Q   71 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH-HC-------TTSEECCCCSHHHHHHHHHHHHS--C
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC-cE-------EEeccCCHHHHHHHHHHHHHHcC--C
Confidence            79999999999999999999999999999999988877654432 22       23789999888998999999998  6


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +|+||||||.... ..++.+.+.|+|++++++|+.++++++|+++|+|++++.|+|||+||.++.
T Consensus        72 iDiLVnNAg~~~~-~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~  135 (252)
T d1zmta1          72 VDVLVSNDIFAPE-FQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPF  135 (252)
T ss_dssp             CCEEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTT
T ss_pred             CCEEEECCcCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccc
Confidence            9999999997643 234889999999999999999999999999999999999999999999875

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=2.9e-29  Score=196.02  Aligned_cols=128  Identities=24%  Similarity=0.352  Sum_probs=110.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++||+++||||++|||+++|++|+++|++|++++|+++.+++.         +  ..++.+|++++      ++.+.+++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~---------~--~~~~~~Dv~~~------~~~~~~~~   64 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---------G--HRYVVCDLRKD------LDLLFEKV   64 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---------C--SEEEECCTTTC------HHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc---------C--CcEEEcchHHH------HHHHHHHh
Confidence            4699999999999999999999999999999999998765432         2  24567787654      56677777


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||.....+  +.+.+.|+|++++++|+.++++++|+++|+|++++.|+||+++|.++.
T Consensus        65 g--~iD~lVnnAG~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~  129 (234)
T d1o5ia_          65 K--EVDILVLNAGGPKAGF--FDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVI  129 (234)
T ss_dssp             C--CCSEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             C--CCcEEEecccccCCcc--hhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccc
Confidence            7  6999999999876544  889999999999999999999999999999999999999999998764

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.96  E-value=4.8e-29  Score=195.55  Aligned_cols=138  Identities=22%  Similarity=0.289  Sum_probs=117.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++.++++|++++++.++.++++.+.
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            356999999999999999999999999999999999998877655543     567888999999999999989999998


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++  ++|+||||||.....+  +.+.+.++|++++++|+.+++.++|+++|+|.+  ++.|+++||.+.
T Consensus        77 ~g--~iDiLinnAg~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~--~~~i~~~ss~a~  139 (241)
T d2a4ka1          77 FG--RLHGVAHFAGVAHSAL--SWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGSVAG  139 (241)
T ss_dssp             HS--CCCEEEEGGGGTTTTC------CHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCEEEEECCCTT
T ss_pred             hC--CccEeccccccccccc--hhhhhcccccccccccccccccccccccccccc--ccceeecccccc
Confidence            88  6999999999876644  889999999999999999999999999998754  467777777654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.5e-29  Score=201.78  Aligned_cols=141  Identities=24%  Similarity=0.332  Sum_probs=114.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEE---EEecChhHHHHHHHHHHhh-CCCceeEEEEEecccCccchhhHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLI---LVSRNHNKLEKISNEIQAE-NPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi---~~~r~~~~l~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .|+|+||||++|||+++|++|+++|++|+   .++|+.+..+++.+..++. ..+.++..+.+|++++++.++.++    
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~----   77 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARE----   77 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHH----
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhh----
Confidence            47899999999999999999999999854   4566655555444444332 235688999999998855544333    


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ......+|++|||||.....+  +.+.+.|+|+++|++|+.|+++++|+++|+|++++.|+|||+||++|.
T Consensus        78 ~~~~g~idilvnnag~~~~~~--~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~  146 (285)
T d1jtva_          78 RVTEGRVDVLVCNAGLGLLGP--LEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL  146 (285)
T ss_dssp             TCTTSCCSEEEECCCCCCCSC--GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT
T ss_pred             hccccchhhhhhccccccccc--ccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhc
Confidence            333347999999999987655  789999999999999999999999999999999999999999999885

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.96  E-value=6.8e-29  Score=196.66  Aligned_cols=140  Identities=22%  Similarity=0.237  Sum_probs=123.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVS-RNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~-r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.||+++||||++|||+++|++|+++|++|++++ |+++.++++.+++++.  +.++..+++|++++++.++.++++.++
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc--CCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            5699999999999999999999999999999865 5666688888888776  567889999999998899989999999


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ++  ++|++|||||.....+  +.+.+.++|+++|++|+.++++++|.++|+|+++  |++++++|.++
T Consensus        82 ~g--~idilinnag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~  144 (259)
T d1ja9a_          82 FG--GLDFVMSNSGMEVWCD--ELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAA  144 (259)
T ss_dssp             HS--CEEEEECCCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGG
T ss_pred             cC--CCcEEEeccccccccc--cccchHHHHHHHHhhccceeeeehhhhhhhhhcC--Ccccccccccc
Confidence            88  6999999999876654  7899999999999999999999999999999643  67878877665

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.96  E-value=1.3e-28  Score=196.22  Aligned_cols=145  Identities=19%  Similarity=0.276  Sum_probs=128.2

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN-HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~-~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      ...+++||+++||||++|||+++|++|+++|++|++++|+ ++.++++.+++++.  +.++.++++|++++++..+.+++
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~   89 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEE   89 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh--CCceeeEeCCCCCHHHHHHHHHH
Confidence            4556889999999999999999999999999999999887 56678888888776  56788999999999999999999


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +.+.++  ++|++|||||.....+  +.+.+.++|++++++|+.|+++++|+++|+|++  +|++++++|.++.
T Consensus        90 ~~~~~g--~idilV~nag~~~~~~--~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~  157 (272)
T d1g0oa_          90 AVKIFG--KLDIVCSNSGVVSFGH--VKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQ  157 (272)
T ss_dssp             HHHHHS--CCCEEEECCCCCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGT
T ss_pred             HHHHhC--CCCccccccccchhhh--hhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccc
Confidence            999888  6999999999877654  889999999999999999999999999999965  4788999887653

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.95  E-value=8.2e-29  Score=195.17  Aligned_cols=141  Identities=19%  Similarity=0.310  Sum_probs=119.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ..|+|+||||++|||+++|++|+++|+  +|++++|++++++++.    +. .+.++.++++|++++++.++.++++.+.
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~----~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   76 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SI-KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TC-CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH----Hh-hCCceEEEEEecCCHHHHHHHHHHHHHH
Confidence            369999999999999999999999997  6888999998877643    22 2567899999999999999988999888


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-----------CCEEEEeccccc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-----------KGAIVNIGSGAA  208 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-----------~g~iv~isS~ag  208 (210)
                      ++..++|+||||||+..+. .++.+.+.++|+++|++|+.|++++++.++|+|++++           .+++++++|..+
T Consensus        77 ~~~~~idilinnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~  155 (250)
T d1yo6a1          77 VGSDGLSLLINNAGVLLSY-GTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCB-CTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             hCCCCeEEEEEcCcccCCC-CccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccc
Confidence            7755699999999987552 3367889999999999999999999999999997652           378999988654

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.8e-28  Score=189.75  Aligned_cols=134  Identities=26%  Similarity=0.394  Sum_probs=113.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      ++||+++||||++|||+++|++|+++|++|++++|++++++++.+       ...+....+|+.    .++.++...+.+
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-------~~~~~~~~~d~~----~~~~~~~~~~~~   72 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-------YPGIQTRVLDVT----KKKQIDQFANEV   72 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-------STTEEEEECCTT----CHHHHHHHHHHC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-------ccCCceeeeecc----cccccccccccc
Confidence            679999999999999999999999999999999999887765432       223444555543    345566777666


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +  ++|+||||||...+.+  +.+.+.|+|++.+++|+.++++++|.++|+|.+++.|+||++||.++.
T Consensus        73 ~--~id~lVn~ag~~~~~~--~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~  137 (245)
T d2ag5a1          73 E--RLDVLFNVAGFVHHGT--VLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS  137 (245)
T ss_dssp             S--CCSEEEECCCCCCCBC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT
T ss_pred             c--cceeEEecccccCCCC--hhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc
Confidence            6  6999999999987654  889999999999999999999999999999999999999999998763

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=5.4e-28  Score=191.06  Aligned_cols=144  Identities=15%  Similarity=0.201  Sum_probs=120.7

Q ss_pred             cccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           59 LKSYGSWALITGATD--GIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        59 ~~~~gk~vlITGass--GiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ++++||+++||||+|  |||+++|++|+++|++|++++|+++..++.. +....  ......+++|++++.+.++.++++
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~   80 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAE-KLAEA--LGGALLFRADVTQDEELDALFAGV   80 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHHHH--TTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHH-Hhhhc--cCcccccccccCCHHHHHHHHHHH
Confidence            467899999999986  9999999999999999999999976555543 34333  345677899999998888888888


Q ss_pred             HHHhcCCCccEEEEcCCCCCCC--cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPK--AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .+.++  ++|+||||||.....  ...+.+.+.++|++.+++|+.+++.++|.++|+|++  +|+||++||.++.
T Consensus        81 ~~~~g--~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~  151 (256)
T d1ulua_          81 KEAFG--GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASE  151 (256)
T ss_dssp             HHHHS--SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGT
T ss_pred             HHhcC--CceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhc
Confidence            88888  699999999986532  123568899999999999999999999999998854  4899999999874

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.4e-26  Score=179.06  Aligned_cols=143  Identities=23%  Similarity=0.285  Sum_probs=119.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.......+|..+....++....+...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCcccccccccccccccccccccccc
Confidence            467999999999999999999999999999999999999999888777     445667778887776666666666666


Q ss_pred             hcCCCccEEEEcCCCCCCCc----ccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC------CCCEEEEecccccc
Q 045749          140 IDGLEVGVLINNVGITYPKA----MFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR------KKGAIVNIGSGAAI  209 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~------~~g~iv~isS~ag~  209 (210)
                      ..  ..|.+++|++......    .+..+.+.|+|++++++|+.|+++++|+++|+|.++      ++|+||++||.+|.
T Consensus        77 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~  154 (248)
T d2o23a1          77 FG--RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF  154 (248)
T ss_dssp             HS--CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             cc--cccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhc
Confidence            66  5889999988765432    235677899999999999999999999999998654      56899999999864

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.94  E-value=8.3e-26  Score=181.67  Aligned_cols=145  Identities=20%  Similarity=0.336  Sum_probs=126.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.. +.+...+++|++++++.++.++.+.+
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHHHHhhhhhh
Confidence            36889999999999999999999999999999999999999999999887664 56778899999999888887788887


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHh-CCCCEEEEeccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMR-RKKGAIVNIGSGAA  208 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~-~~~g~iv~isS~ag  208 (210)
                      .++  ++|++|||||.....+  +.+.+.++|++.+++|..+.+.+.+...+.+.. +..+.+++++|.++
T Consensus       100 ~~g--~iDilvnnAg~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~  166 (294)
T d1w6ua_         100 VAG--HPNIVINNAAGNFISP--TERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA  166 (294)
T ss_dssp             HTC--SCSEEEECCCCCCCSC--GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHH
T ss_pred             hcc--ccchhhhhhhhccccc--cccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchh
Confidence            777  6999999999877654  778999999999999999999999988877665 45567888888764

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=2.8e-25  Score=173.38  Aligned_cols=133  Identities=11%  Similarity=0.032  Sum_probs=102.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +||+++||||++|||+++|++|+++|++|+++++++.+.            ........+|.++....+...+.+.+..+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999999876431            22233334444444333444455556666


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ..++|+||||||..... ....+.+.|+|+++|++|+.++++++|.++|+|++  .|+||++||.++.
T Consensus        69 ~~~iD~lInnAG~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~  133 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGG-NAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAAL  133 (236)
T ss_dssp             TCCEEEEEECCCCCCCB-CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGG
T ss_pred             CCCceEEEECCcccccc-cchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHc
Confidence            55799999999975442 22556778999999999999999999999999954  4999999999875

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.91  E-value=9.9e-25  Score=170.06  Aligned_cols=132  Identities=12%  Similarity=0.105  Sum_probs=99.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +++|+||||++|||+++|++|+++|++|++++|++++.            ........+|..+........+.+.+....
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcC
Confidence            34579999999999999999999999999999986531            112223333444333333334555555554


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      .++|+||||||...... +..+.+.++|+.++++|+.++++++|+++|+|++  .|+||++||.++.
T Consensus        70 g~iD~linnAG~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~  133 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGS-ASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAM  133 (235)
T ss_dssp             CCEEEEEECCCCCCCBC-TTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGG
T ss_pred             CCeeEEEECCccccccc-ccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhc
Confidence            58999999999765432 2445567889999999999999999999999954  4899999998874

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.90  E-value=3.6e-23  Score=163.23  Aligned_cols=136  Identities=18%  Similarity=0.218  Sum_probs=110.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCh---hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNH---NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~---~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+++++||||++|||+++|++|+++|+ +|++++|+.   +..++..++++..  +.++.++.+|+++..+.++    +.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~~~~~~----~~   81 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRE----LL   81 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHH----HH
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchHHHHHH----hh
Confidence            367999999999999999999999999 588999975   4466666777654  6789999999988754444    43


Q ss_pred             HHhcC-CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          138 MAIDG-LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       138 ~~~~~-~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      +...+ .++|.++||||.....+  +.+.+.++|++++++|+.|++++.+.    +..++.++||++||++|.
T Consensus        82 ~~i~~~~~i~~vv~~ag~~~~~~--~~~~~~~~~~~~~~~~~~g~~~l~~~----~~~~~~~~iv~~SS~a~~  148 (259)
T d2fr1a1          82 GGIGDDVPLSAVFHAAATLDDGT--VDTLTGERIERASRAKVLGARNLHEL----TRELDLTAFVLFSSFASA  148 (259)
T ss_dssp             HTSCTTSCEEEEEECCCCCCCCC--GGGCCHHHHHHHTHHHHHHHHHHHHH----HTTSCCSEEEEEEEHHHH
T ss_pred             ccccccccccccccccccccccc--cccccHHHHHHHhhhhccchhHHHHH----hhccCCceEeeecchhhc
Confidence            33322 27999999999987755  88999999999999999999998775    455677999999999875

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.90  E-value=3e-23  Score=166.53  Aligned_cols=146  Identities=15%  Similarity=0.134  Sum_probs=106.0

Q ss_pred             CcccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCC---------C-ceeEEEEEec--
Q 045749           58 NLKSYGSWALITGATD--GIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENP---------N-TQINIVEYDF--  123 (210)
Q Consensus        58 ~~~~~gk~vlITGass--GiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~---------~-~~~~~~~~D~--  123 (210)
                      +++++||+++||||+|  |||+++|++|+++|++|++++|++.......+.......         . ..-....+|.  
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence            4677899999999875  999999999999999999999986544333222211110         0 0112333332  


Q ss_pred             ------------------ccCccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHH
Q 045749          124 ------------------SCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVT  185 (210)
Q Consensus       124 ------------------~~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  185 (210)
                                        ++....++.++++.+.++  ++|+||||||.......++.+.+.|+|++++++|+.++++++
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G--~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~  160 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFG--SIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHS--CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhC--CCcccccccccccccccchhhhhcccccccccchhhhhhhhh
Confidence                              233344566777888887  799999999986544455889999999999999999999999


Q ss_pred             HHHHHHhHhCCCCEEEEecccc
Q 045749          186 KAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       186 ~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      ++++|+|.++  |++++++|.+
T Consensus       161 ~~~~~~~~~~--g~~~~~~~~~  180 (297)
T d1d7oa_         161 SHFLPIMNPG--GASISLTYIA  180 (297)
T ss_dssp             HHHGGGEEEE--EEEEEEECGG
T ss_pred             hHHHHHhhcC--Ccceeeeehh
Confidence            9999987554  5555555544

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.90  E-value=4.8e-23  Score=164.22  Aligned_cols=141  Identities=22%  Similarity=0.250  Sum_probs=105.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhCCCceeEEEEE-----------------eccc
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSR-NHNKLEKISNEIQAENPNTQINIVEY-----------------DFSC  125 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~-----------------D~~~  125 (210)
                      .+++||||++|||+++|++|+++|++|+++++ ++++++++.+++.+.++ .....+++                 |+++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcC-CceEEEEeecccccccccccccccccCCC
Confidence            37999999999999999999999999999776 56678888888887653 33444444                 4666


Q ss_pred             CccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHH--------------HHhHhhhhHHHHHHHHHHHH
Q 045749          126 DVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWM--------------DIVRVNLEGTTRVTKAVLTG  191 (210)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~--------------~~~~vN~~g~~~l~~~~l~~  191 (210)
                      +.+.++.++++.++++  ++|+||||||...+.+  +.+.+.++|+              .+|++|+.++++++|.+.+.
T Consensus        82 ~~~v~~~~~~~~~~~G--~iDiLVnnAG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  157 (284)
T d1e7wa_          82 FTRCAELVAACYTHWG--RCDVLVNNASSFYPTP--LLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  157 (284)
T ss_dssp             HHHHHHHHHHHHHHHS--CCCEEEECCCCCCCCC--CCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhC--CCCEEEecCCccCCCc--hhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccch
Confidence            6666666777777777  6999999999987654  5566655554              47999999999999999886


Q ss_pred             hH------hCCCCEEEEecccccc
Q 045749          192 MM------RRKKGAIVNIGSGAAI  209 (210)
Q Consensus       192 m~------~~~~g~iv~isS~ag~  209 (210)
                      +.      +.+.|+|++++|.++.
T Consensus       158 ~~~~~~~~~~~~~~ii~~~s~~~~  181 (284)
T d1e7wa_         158 VAGTPAKHRGTNYSIINMVDAMTN  181 (284)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTT
T ss_pred             hhhhHHHhcCCCCccccccccccc
Confidence            43      3446789999988753

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.89  E-value=6.1e-23  Score=167.35  Aligned_cols=143  Identities=12%  Similarity=0.152  Sum_probs=110.7

Q ss_pred             CcEEEEEc--CCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCC----------CceeEEEEE---------
Q 045749           63 GSWALITG--ATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENP----------NTQINIVEY---------  121 (210)
Q Consensus        63 gk~vlITG--assGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~----------~~~~~~~~~---------  121 (210)
                      +|++||||  +++|||+++|+.|+++|++|++++++............+...          ........+         
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            79999999  558999999999999999999999987665544433322211          011223333         


Q ss_pred             -----------ecccCccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHH
Q 045749          122 -----------DFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLT  190 (210)
Q Consensus       122 -----------D~~~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~  190 (210)
                                 |+++..+.++.++.+.+.++  ++|+||||||...+...++.+.+.++|+++|++|++|+++++|+++|
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G--~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~  159 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYG--KINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHC--CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhC--CCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence                       34455556677788888888  69999999998765444578999999999999999999999999999


Q ss_pred             HhHhCCCCEEEEecccccc
Q 045749          191 GMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       191 ~m~~~~~g~iv~isS~ag~  209 (210)
                      +|.+  .|+||++||.++.
T Consensus       160 ~m~~--~GsIv~iss~~~~  176 (329)
T d1uh5a_         160 IMKP--QSSIISLTYHASQ  176 (329)
T ss_dssp             GEEE--EEEEEEEECGGGT
T ss_pred             hccc--ccccccceeehhc
Confidence            9943  5899999998764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.83  E-value=2e-20  Score=145.40  Aligned_cols=130  Identities=21%  Similarity=0.249  Sum_probs=100.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +|+++||||++|||+++|++|+++|++|++++|+++              ..+....++|+++............+..  
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~--   64 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEEA--   64 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHHS--
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc--------------cccceEeeccccchhhhHHHHHhhhccc--
Confidence            589999999999999999999999999999999864              2345567788877654444444433332  


Q ss_pred             CCccEEEEcCCCCCCC--cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHH------hHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPK--AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTG------MMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~------m~~~~~g~iv~isS~ag~  209 (210)
                       ..+..+++++.....  .......+.+.|++++++|+.+++.+++.+.+.      |.+++.|+|||+||.+|.
T Consensus        65 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~  138 (241)
T d1uaya_          65 -PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF  138 (241)
T ss_dssp             -CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH
T ss_pred             -cccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhc
Confidence             456677777654432  122456788999999999999999999999998      556678999999998764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1.1e-20  Score=148.67  Aligned_cols=142  Identities=13%  Similarity=0.182  Sum_probs=108.6

Q ss_pred             cCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGATD--GIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGass--GiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++||+++||||+|  |||+++|+.|+++|++|++++|+++..+.+ +++...  .........|.+++.+....++++.+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQ--LGSDIVLQCDVAEDASIDTMFAELGK   79 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhh--cCCcceeecccchHHHHHHHHHHhhh
Confidence            5699999999998  899999999999999999999997655544 444443  33455667777776555555555555


Q ss_pred             HhcCCCccEEEEcCCCCCCCcc---cccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAM---FFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                      ..+  ++|++||||+.......   ...+...+.|+..+++|+.+.+.+++.+.|.|.  +++.|+++||.++.
T Consensus        80 ~~~--~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Ii~iss~~~~  149 (258)
T d1qsga_          80 VWP--KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAE  149 (258)
T ss_dssp             TCS--SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECGGGT
T ss_pred             ccc--ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCcEEEEecchhhc
Confidence            544  79999999998654331   123567788999999999999999999999873  34679999998753

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.82  E-value=2.2e-20  Score=147.48  Aligned_cols=128  Identities=16%  Similarity=0.191  Sum_probs=103.8

Q ss_pred             cCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGA--TDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGa--ssGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++||+++||||  ++|||+++|++|+++|++|++++|+++++.+   ++.+.. +.+...+++|++++.+..+.++.+.+
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRL-PAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHc-CCceeeEeeecccccccccccchhhh
Confidence            56999999994  5799999999999999999999999876543   333332 45677889999999888888888888


Q ss_pred             HhcCC-CccEEEEcCCCCCCC---cccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHh
Q 045749          139 AIDGL-EVGVLINNVGITYPK---AMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGM  192 (210)
Q Consensus       139 ~~~~~-~id~lvnnAg~~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m  192 (210)
                      .++.. ++|+++||||.....   ..++.+.+.++|.+.+++|+.+++...+...+.+
T Consensus        80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIM  137 (268)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhc
Confidence            87654 799999999976432   2245678999999999999999999999887654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.82  E-value=2.7e-20  Score=147.51  Aligned_cols=139  Identities=17%  Similarity=0.210  Sum_probs=98.5

Q ss_pred             cCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGATD--GIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGass--GiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++||++|||||+|  |||+++|++|+++|++|++++|+++ +++..+++.+.  .....+..+|++++.+.++.++++.+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE--LNSPYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhh--CCceeEeeecccchhhHHHHHHHHHH
Confidence            5699999999765  9999999999999999999999954 45556666665  34556788999999888888888888


Q ss_pred             HhcCCCccEEEEcCCCCCCCc--ccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCE-EEEecccc
Q 045749          139 AIDGLEVGVLINNVGITYPKA--MFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGA-IVNIGSGA  207 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~-iv~isS~a  207 (210)
                      .++  ++|++|||+|......  ....+...+.+...+.++..+.....+...+   +.+.++ |+++||.+
T Consensus        80 ~~g--~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~s~~~  146 (274)
T d2pd4a1          80 DLG--SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKP---LLNNGASVLTLSYLG  146 (274)
T ss_dssp             HTS--CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG---GEEEEEEEEEEECGG
T ss_pred             HcC--CCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccc---ccccCcceeeecccc
Confidence            877  6999999999865422  1122344455555555555555555555443   333444 55555544

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.82  E-value=1.7e-19  Score=142.06  Aligned_cols=142  Identities=18%  Similarity=0.238  Sum_probs=106.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH-HHHHHHHHHhhCCCceeEEEEEecccCccchhhHH----HHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK-LEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIK----AIEM  138 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~-l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~~~  138 (210)
                      .++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++.... +.+....+.|..++.+.++.++    ++.+
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc-CCceEEEecccccchhHHHHHHHHHHHHHH
Confidence            379999999999999999999999999999998654 577788887765 4566677777777666555544    4455


Q ss_pred             HhcCCCccEEEEcCCCCCCCccc---------ccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-----CCCEEEEec
Q 045749          139 AIDGLEVGVLINNVGITYPKAMF---------FHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-----KKGAIVNIG  204 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~---------~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-----~~g~iv~is  204 (210)
                      +++  ++|+||||||+..+.+..         ..+...+.+...+..|+.+++...+...+.+...     ..+.+++++
T Consensus        81 ~~g--~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (266)
T d1mxha_          81 AFG--RCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC  158 (266)
T ss_dssp             HHS--CCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred             HhC--CCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhh
Confidence            665  699999999987654310         1223456678899999999999999988877543     346788888


Q ss_pred             cccc
Q 045749          205 SGAA  208 (210)
Q Consensus       205 S~ag  208 (210)
                      |..+
T Consensus       159 ~~~~  162 (266)
T d1mxha_         159 DAMT  162 (266)
T ss_dssp             CGGG
T ss_pred             hccc
Confidence            8765

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.79  E-value=6.6e-21  Score=143.75  Aligned_cols=115  Identities=14%  Similarity=0.213  Sum_probs=92.8

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++....   ......+|+++.       +.+.
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~d~~~~-------~~~~   87 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADD-------ASRA   87 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSH-------HHHH
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc---chhhhhhhcccH-------HHHH
Confidence            456779999999999999999999999999999999999999999998887642   334566787765       3444


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHH
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLT  190 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~  190 (210)
                      +.++  ++|+||||||..      +...+.|+|++.+++|+.+.++....+.+
T Consensus        88 ~~~~--~iDilin~Ag~g------~~~~~~e~~~~~~~~nv~~~~~~~~~~~~  132 (191)
T d1luaa1          88 EAVK--GAHFVFTAGAIG------LELLPQAAWQNESSIEIVADYNAQPPLGI  132 (191)
T ss_dssp             HHTT--TCSEEEECCCTT------CCCBCHHHHHTCTTCCEEEECCCSSSCSB
T ss_pred             HHhc--CcCeeeecCccc------cccCCHHHHHhhhcceeehhHhhHHHHHH
Confidence            5555  689999999964      23568999999999999888776655433

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.64  E-value=5.2e-16  Score=121.17  Aligned_cols=115  Identities=23%  Similarity=0.249  Sum_probs=84.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+++||||++|||+++|++|+++|++|++++|++++.                   .+|+.+....+........... .
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~-------------------~~d~~~~~~~~~~~~~~~~~~~-~   61 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-------------------IADLSTAEGRKQAIADVLAKCS-K   61 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-------------------ECCTTSHHHHHHHHHHHHTTCT-T
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH-------------------HHHhcCHHHHHHHHHHHHHHhC-C
Confidence            7999999999999999999999999999999975421                   2344443222222222222222 2


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      ++|++|||||....         .+.+++..++|..+...+.+...|.+.+...+.+.++++..
T Consensus        62 ~id~lv~~Ag~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (257)
T d1fjha_          62 GMDGLVLCAGLGPQ---------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA  116 (257)
T ss_dssp             CCSEEEECCCCCTT---------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             CCcEEEEcCCCCCc---------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeecc
Confidence            69999999997532         23467789999999999999999999888778887777653

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.55  E-value=8.1e-15  Score=119.73  Aligned_cols=128  Identities=20%  Similarity=0.166  Sum_probs=85.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh-----HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN-----KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~-----~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      |+||||||+|-||..++++|.++|++|+.++|...     +++....+....  ..++.++.+|+++.    +.++++.+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~----~~~~~~~~   75 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTC--NPKFHLHYGDLSDT----SNLTRILR   75 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCH----HHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhc--CCCeEEEEeecCCH----HHHHHHHh
Confidence            78999999999999999999999999999999543     233332222221  45678888888766    33333333


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      ..   .+|+++|.|+......      +.++.+..+++|+.|+.++.+++... ..++..++|++||.+
T Consensus        76 ~~---~~d~v~h~aa~~~~~~------~~~~~~~~~~~Nv~gt~nllea~~~~-~~~~~~r~i~~SS~~  134 (357)
T d1db3a_          76 EV---QPDEVYNLGAMSHVAV------SFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTSE  134 (357)
T ss_dssp             HH---CCSEEEECCCCCTTTT------TTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGG
T ss_pred             cc---CCCEEEEeecccccch------hhhCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEEEchh
Confidence            33   5899999999865422      23445568999999999999887542 123346899999865

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.45  E-value=1e-13  Score=112.06  Aligned_cols=126  Identities=19%  Similarity=0.217  Sum_probs=87.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      .+|||||+|-||..++++|+++|++|++++|-....+......+.. ...++.++++|+++.    +.++++.+..   +
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~----~~l~~~~~~~---~   73 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNE----ALMTEILHDH---A   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH-HTSCCEEEECCTTCH----HHHHHHHHHT---T
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh-cCCCCEEEEeecCCH----HHHHHHHhcc---C
Confidence            3899999999999999999999999999987322211111111111 145788889998876    2233333322   5


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      +|++||.|+....      ..+.++.++.+++|+.|+.++.+++..    .+-.++|++||.+.
T Consensus        74 ~d~ViHlAa~~~~------~~~~~~~~~~~~~Nv~gt~nlL~~~~~----~~v~~~i~~Ss~~v  127 (338)
T d1udca_          74 IDTVIHFAGLKAV------GESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNFIFSSSATV  127 (338)
T ss_dssp             CSEEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGG
T ss_pred             CCEEEECCCccch------hhHHhCHHHHHHhHHHHHHHHHHHHHH----hCCCEEEecCcceE
Confidence            8999999996432      123344567899999999999888654    34568999998764

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.41  E-value=3.1e-13  Score=109.51  Aligned_cols=126  Identities=14%  Similarity=0.176  Sum_probs=87.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH-HHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK-LEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~-l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      |+||||||+|-||..++++|+++|++|+++++.... .+.....-...  ..++.++.+|+.+.    +.++.+.+..  
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~----~~l~~~~~~~--   73 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDR----KGLEKVFKEY--   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCH----HHHHHHHHHS--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc--ccCCeEEEeecCCH----HHHHHHHhcc--
Confidence            789999999999999999999999999999863221 11111111111  34677788888765    3333333332  


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       ++|+++|+|+......      ..++......+|+.|+.++.+++..    .+..++|++||...
T Consensus        74 -~~d~VihlAa~~~~~~------~~~~~~~~~~~N~~~t~~ll~~~~~----~~i~~~i~~SS~~v  128 (347)
T d1z45a2          74 -KIDSVIHFAGLKAVGE------STQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATV  128 (347)
T ss_dssp             -CCCEEEECCSCCCHHH------HHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGG
T ss_pred             -CCCEEEEccccccccc------cccCcccccccchhhhHHHHHHHHh----cccceEEeecceee
Confidence             5899999999753311      2344456889999999999988743    34468999999754

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.41  E-value=2e-12  Score=104.60  Aligned_cols=126  Identities=19%  Similarity=0.178  Sum_probs=91.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +||+|+||||+|-||..++++|.++|++|+.+.|+.++.+...+.............+..|+.++.+..+       .+.
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-------~~~   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE-------VIK   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT-------TTT
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhh-------hcc
Confidence            4999999999999999999999999999999999988776665544333334445556678877744333       222


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                        ..|+++|+|+....      +.+.   ...++.|+.|+.++.+.+..   ..+..++|++||+++
T Consensus        83 --~~~~v~~~a~~~~~------~~~~---~~~~~~nv~gt~~ll~~~~~---~~~v~~~i~~SS~~~  135 (342)
T d1y1pa1          83 --GAAGVAHIASVVSF------SNKY---DEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVS  135 (342)
T ss_dssp             --TCSEEEECCCCCSC------CSCH---HHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGG
T ss_pred             --cchhhhhhcccccc------cccc---cccccchhhhHHHHHHhhhc---cccccccccccccee
Confidence              47899999986432      2233   35678899999988887543   124578999999754

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.38  E-value=2.2e-12  Score=106.02  Aligned_cols=131  Identities=15%  Similarity=0.115  Sum_probs=90.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh----------------hHHHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH----------------NKLEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~----------------~~l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      |+.|+||||+|-||.+++++|+++|++|+++|.-.                ....+.....+... +.++.++.+|+++.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc-CCCcEEEEccCCCH
Confidence            68899999999999999999999999999997311                11111122222211 45688889998877


Q ss_pred             ccchhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          127 VVSAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                          +.++++.+..   ++|+++|.|+.....   ....+++.....+++|+.|+.++.+.+...   ....++++.||.
T Consensus        80 ----~~l~~~~~~~---~~d~ViHlAa~~~~~---~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~~i~~ss~  146 (393)
T d1i24a_          80 ----EFLAESFKSF---EPDSVVHFGEQRSAP---YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---GEECHLVKLGTM  146 (393)
T ss_dssp             ----HHHHHHHHHH---CCSEEEECCSCCCHH---HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEECCG
T ss_pred             ----HHHHHHHHhh---cchheeccccccccc---cccccccccccccccccccccHHHHHHHHh---ccccceeecccc
Confidence                3333443333   589999999875432   234567777889999999999999886532   233467777775


Q ss_pred             c
Q 045749          207 A  207 (210)
Q Consensus       207 a  207 (210)
                      +
T Consensus       147 ~  147 (393)
T d1i24a_         147 G  147 (393)
T ss_dssp             G
T ss_pred             c
Confidence            4

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.38  E-value=8.1e-13  Score=105.87  Aligned_cols=123  Identities=15%  Similarity=0.105  Sum_probs=83.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNH-NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~-~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      .||||||+|-||..++++|.++|++|+++++-. ....+..+.+..   ..++.++.+|+.+.    +.++++.+..   
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~----~~l~~~~~~~---   71 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNK----NDVTRLITKY---   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCH----HHHHHHHHHH---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCH----HHHHHHHHhc---
Confidence            589999999999999999999999999987522 111122222222   45678888998776    2233333333   


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      ++|++||+|+.....      ...++.+..+++|+.|+.++.+++..    .+..+.++.||..
T Consensus        72 ~~d~Vih~aa~~~~~------~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~i~~sS~~  125 (338)
T d1orra_          72 MPDSCFHLAGQVAMT------TSIDNPCMDFEINVGGTLNLLEAVRQ----YNSNCNIIYSSTN  125 (338)
T ss_dssp             CCSEEEECCCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHH----HCTTCEEEEEEEG
T ss_pred             CCceEEeeccccccc------ccccChHHHHHHHHHHHHHHHHhhhc----ccccccccccccc
Confidence            589999999875431      13345567899999999999988643    3444455555543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.6e-12  Score=97.92  Aligned_cols=112  Identities=18%  Similarity=0.177  Sum_probs=80.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .|+++||||+|+||.+++++|.++|++|.+..|+.+++...        ....+.++.+|+++.       +.+.+.+. 
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~-------~~l~~al~-   66 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQA-------ADVDKTVA-   66 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSH-------HHHHHHHT-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccch-------hhHHHHhc-
Confidence            57899999999999999999999999999999998774321        134577888888766       34445555 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       +.|++|+++|......    ..         +++..++    +.+++.+++.+-.++|++||...
T Consensus        67 -~~d~vi~~~g~~~~~~----~~---------~~~~~~~----~~l~~aa~~~~v~r~i~~ss~~~  114 (205)
T d1hdoa_          67 -GQDAVIVLLGTRNDLS----PT---------TVMSEGA----RNIVAAMKAHGVDKVVACTSAFL  114 (205)
T ss_dssp             -TCSEEEECCCCTTCCS----CC---------CHHHHHH----HHHHHHHHHHTCCEEEEECCGGG
T ss_pred             -CCCEEEEEeccCCchh----hh---------hhhHHHH----HHHHHHHHhcCCCeEEEEeeeec
Confidence             4789999998753321    11         1223333    33445567777789999998653

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.36  E-value=7.7e-13  Score=107.08  Aligned_cols=128  Identities=15%  Similarity=0.081  Sum_probs=90.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .+||+|+||||+|-||..++++|.++|++|+.++|+..+.....+..+   ....+..+.+|+++.    +.+.++.+..
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~i~~~~~Dl~d~----~~l~~~~~~~   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQ----NKLLESIREF   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCH----HHHHHHHHHH
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh---cccCCeEEEeeccCh----Hhhhhhhhhc
Confidence            358999999999999999999999999999999998765443322221   134578888898766    3333333333


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                         ++|++++.|+....      ..+.+..+..+++|+.|+.++.+++...   .....++..||..
T Consensus        79 ---~~~~v~~~aa~~~~------~~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~  133 (356)
T d1rkxa_          79 ---QPEIVFHMAAQPLV------RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDK  133 (356)
T ss_dssp             ---CCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGG
T ss_pred             ---hhhhhhhhhccccc------cccccCCccccccccccchhhhhhhhcc---ccccccccccccc
Confidence               57899999986533      2234556778999999999999886542   2334556555543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=3.7e-12  Score=102.91  Aligned_cols=128  Identities=18%  Similarity=0.229  Sum_probs=87.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------hhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRN------HNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~------~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      .|+||||||+|-||.+++++|+++|++|+.+++.      .....+..+.+... ...++.++.+|+++.    +.++++
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~----~~l~~~   76 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQ----GALQRL   76 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCH----HHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh-cCCCcEEEEeecccc----cccccc
Confidence            3688999999999999999999999999998742      11111111222211 145788889998866    222333


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                         ....++|+++|.|+.....      .+.++..+.+++|+.|+.++.+++    .+.+-.++++.||...
T Consensus        77 ---~~~~~~~~i~h~Aa~~~~~------~~~~~p~~~~~~Nv~gt~~l~~~~----~~~~v~~~i~~ss~~~  135 (346)
T d1ek6a_          77 ---FKKYSFMAVIHFAGLKAVG------ESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATV  135 (346)
T ss_dssp             ---HHHCCEEEEEECCSCCCHH------HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGG
T ss_pred             ---ccccccccccccccccCcH------hhHhCHHHHHHhhhcccccccchh----hhcCccccccccccee
Confidence               2223688999999975432      133445568999999999988875    3455568999988753

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.30  E-value=2.2e-12  Score=103.64  Aligned_cols=130  Identities=17%  Similarity=0.123  Sum_probs=85.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh-----HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN-----KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~-----~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      |++|||||+|-||.+++++|.++|++|+.++|...     +++........ .....+.+...|+++.    +.++...+
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Di~~~----~~~~~~~~   76 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN-VNKALMKLHYADLTDA----SSLRRWID   76 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCH----HHHHHHHH
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhh-ccccceEEEEccccCH----HHHHHHHh
Confidence            78999999999999999999999999999998532     22222111111 1134567777787766    22333322


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGSGA  207 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS~a  207 (210)
                      ..   ++|+++|.|+.....      .+.++....++.|..+...+..++.....+. ...+++..||..
T Consensus        77 ~~---~~D~Vih~Aa~~~~~------~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~  137 (339)
T d1n7ha_          77 VI---KPDEVYNLAAQSHVA------VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSE  137 (339)
T ss_dssp             HH---CCSEEEECCSCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG
T ss_pred             hh---ccchhhhcccccccc------ccccCccccccccccccchhhhhhhhcccccccceeeeecccce
Confidence            22   589999999875432      2345556789999999999998887654433 334566666543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=4.2e-12  Score=102.36  Aligned_cols=129  Identities=19%  Similarity=0.120  Sum_probs=85.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh-----HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN-----KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~-----~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      |++|||||+|-||.+++++|.++|++|+.++|...     +++........ ....++.++.+|+++.    +.+..+.+
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~----~~~~~~~~   76 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA-HIEGNMKLHYGDLTDS----TCLVKIIN   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCH----HHHHHHHH
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhh-hccCCcEEEEeecCCc----hhhHHHHh
Confidence            44599999999999999999999999999999642     22222111111 1135678888898766    33344444


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      ..   +++++++.|+.....      .+.++....+++|+.|+.++..++...- ..+..++|++||.+
T Consensus        77 ~~---~~~~v~~~~a~~~~~------~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~~~~i~~SS~~  135 (347)
T d1t2aa_          77 EV---KPTEIYNLGAQSHVK------ISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSE  135 (347)
T ss_dssp             HH---CCSEEEECCSCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGG
T ss_pred             hc---ccceeeeeeeccccc------hhhccchhhhhhHHHHHHHHHHHHHHcC-CCCCcEEEEecchh
Confidence            43   477888888765332      1334455678999999999998865432 12335899999865

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.27  E-value=1.5e-12  Score=106.19  Aligned_cols=129  Identities=12%  Similarity=0.089  Sum_probs=87.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEE-EecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~-~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      .||||||+|-||.+++++|+++|+.|++ +++......  .+.+.......++.++..|+++.    ..++.+.+..   
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~----~~l~~~~~~~---   72 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISESNRYNFEHADICDS----AEITRIFEQY---   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCH----HHHHHHHHHH---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhhhcCCcEEEEccCCCH----HHHHHHHHhC---
Confidence            4899999999999999999999998544 554221100  01122222245788888898776    2333333333   


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-----CCCEEEEeccccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-----KKGAIVNIGSGAA  208 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-----~~g~iv~isS~ag  208 (210)
                      ++|++||+|+.....      .+.++..+.+++|+.|+.++.+.+...-...     +..++|++||.+.
T Consensus        73 ~~d~VihlAa~~~~~------~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~v  136 (361)
T d1kewa_          73 QPDAVMHLAAESHVD------RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEV  136 (361)
T ss_dssp             CCSEEEECCSCCCHH------HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGG
T ss_pred             CCCEEEECccccchh------hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEecccee
Confidence            589999999865331      1334445689999999999999988754332     3468999999763

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.24  E-value=2.7e-11  Score=97.57  Aligned_cols=128  Identities=13%  Similarity=0.121  Sum_probs=87.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh----hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH----NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~----~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      ...|++|||||+|-||.+++++|.++|++|+.++|..    ...+......... ....+.++..|..+.       ...
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~d~-------~~~   85 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK-QWSNFKFIQGDIRNL-------DDC   85 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH-HHTTEEEEECCTTSH-------HHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhc-ccCCeeEEeeccccc-------ccc
Confidence            3468999999999999999999999999999998732    2232222221111 123566777776544       223


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .....  ..+.+++.++....      ..+.++....+++|+.|+.++.+++.    +.+..++|++||.+-
T Consensus        86 ~~~~~--~~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~----~~~~~~~i~~SS~~v  145 (341)
T d1sb8a_          86 NNACA--GVDYVLHQAALGSV------PRSINDPITSNATNIDGFLNMLIAAR----DAKVQSFTYAASSST  145 (341)
T ss_dssp             HHHHT--TCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEGGG
T ss_pred             ccccc--cccccccccccccc------cccccCccchhheeehhHHHHHHHHH----hcCCceEEEccccee
Confidence            33333  46678887765432      12456677899999999999988864    345568999999764

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.24  E-value=5.4e-12  Score=100.68  Aligned_cols=125  Identities=14%  Similarity=0.080  Sum_probs=84.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      |+||||||+|-||..++++|.++|++|+.++|......  .+.++......++.++.+|+++.    +.+++.....   
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~----~~~~~~~~~~---   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMADA----CSVQRAVIKA---   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTCGGGEEEEECCTTCH----HHHHHHHHHH---
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcccCCcEEEEccccCh----HHhhhhhccc---
Confidence            68999999999999999999999999999998653211  11222222345788899998876    3233333333   


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      ..++++++|+......      ..++....++.|+.|+.++.+++...   ....++++.||.
T Consensus        72 ~~~~~~~~a~~~~~~~------~~~~~~~~~~~n~~g~~~~l~~~~~~---~~~~~~i~~Ss~  125 (321)
T d1rpna_          72 QPQEVYNLAAQSFVGA------SWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTS  125 (321)
T ss_dssp             CCSEEEECCSCCCHHH------HTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEG
T ss_pred             cccccccccccccccc------cccchHHHHhhhhhchHHHHHHHHHh---CCCcccccccch
Confidence            3667888876543311      22334578999999999998886432   223466666664

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.15  E-value=7.9e-11  Score=94.66  Aligned_cols=117  Identities=15%  Similarity=0.225  Sum_probs=82.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      +++||||+|-||.+++++|+++| .+|+.+++......+.       ....++.++.+|++++...   .+.+.   .  
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~-------~~~~~~~~i~~Di~~~~~~---~~~~~---~--   66 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LNHPHFHFVEGDISIHSEW---IEYHV---K--   66 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG-------TTCTTEEEEECCTTTCSHH---HHHHH---H--
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhh-------ccCCCeEEEECccCChHHH---HHHHH---h--
Confidence            48999999999999999999999 5799998875543321       1245788999999876321   12222   1  


Q ss_pred             CccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          144 EVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       144 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      ++|+++|+|+......      ..++....+++|+.|+.++.+.+..    .+ -+.++.||..
T Consensus        67 ~~d~Vih~a~~~~~~~------~~~~~~~~~~~nv~gt~~ll~~~~~----~~-~~~~~~ss~~  119 (342)
T d2blla1          67 KCDVVLPLVAIATPIE------YTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSE  119 (342)
T ss_dssp             HCSEEEECBCCCCHHH------HHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGG
T ss_pred             CCCccccccccccccc------cccCCcccccccccccccccccccc----cc-cccccccccc
Confidence            4889999999754321      2344457899999999999998643    33 4566777654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=4e-11  Score=91.78  Aligned_cols=120  Identities=17%  Similarity=0.191  Sum_probs=85.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAI  136 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  136 (210)
                      +++++|.++||||+|.||.+++++|.++|.  +|++.+|++.....      ..  ...+....+|+.+.       +.+
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~--~~~i~~~~~D~~~~-------~~~   74 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EA--YKNVNQEVVDFEKL-------DDY   74 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GG--GGGCEEEECCGGGG-------GGG
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cc--cceeeeeeeccccc-------ccc
Confidence            445689999999999999999999999995  79999997644221      00  23445555666544       233


Q ss_pred             HHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          137 EMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       137 ~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .+.+.  ..|+++|++|...         .........++|+.++..+.+.+.    +.+-.++|++||..+
T Consensus        75 ~~~~~--~~d~vi~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~a~----~~~v~~fi~~Ss~~~  131 (232)
T d2bkaa1          75 ASAFQ--GHDVGFCCLGTTR---------GKAGAEGFVRVDRDYVLKSAELAK----AGGCKHFNLLSSKGA  131 (232)
T ss_dssp             GGGGS--SCSEEEECCCCCH---------HHHHHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTC
T ss_pred             ccccc--ccccccccccccc---------cccchhhhhhhcccccceeeeccc----ccCccccccCCcccc
Confidence            44444  4889999998531         223345567889999988888763    456678999998764

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=3e-11  Score=96.42  Aligned_cols=116  Identities=13%  Similarity=0.116  Sum_probs=75.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh-HHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN-KLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~-~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      |.++||||+|-||.+++++|.++|++|+.++|... +.+.    +.......++     |+.+.+..+.       ... 
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~----~~~~~~~~~~-----d~~~~~~~~~-------~~~-   64 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN----VEHWIGHENF-----ELINHDVVEP-------LYI-   64 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG----TGGGTTCTTE-----EEEECCTTSC-------CCC-
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHH----HHHhcCCCce-----EEEehHHHHH-------HHc-
Confidence            68999999999999999999999999999987322 1111    1111112233     3333321111       111 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                       ++|++||+|+......      ..++..+.+++|+.|+.++.+++..    .+ -++|++||.+-
T Consensus        65 -~~d~VihlAa~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~~~~----~~-~k~I~~SS~~v  118 (312)
T d2b69a1          65 -EVDQIYHLASPASPPN------YMYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEV  118 (312)
T ss_dssp             -CCSEEEECCSCCSHHH------HTTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGG
T ss_pred             -CCCEEEECcccCCchh------HHhCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEEChhe
Confidence             5899999998654311      1123456789999999999987543    33 48999998653

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.08  E-value=2.4e-10  Score=90.64  Aligned_cols=109  Identities=12%  Similarity=0.127  Sum_probs=77.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .|.|+||||+|-||.+++++|+++|+.|+++++..+                      +|+.+.    +.++.+.+..  
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~----------------------~~~~~~----~~~~~~~~~~--   53 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------------LNLLDS----RAVHDFFASE--   53 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT----------------------CCTTCH----HHHHHHHHHH--
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh----------------------ccccCH----HHHHHHHhhc--
Confidence            467999999999999999999999999887765321                      234333    3344443332  


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccccc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAAI  209 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag~  209 (210)
                       .+|.++++|+......     ....+..+.+++|+.|+.++.+++.    +.+-.++|++||.+.+
T Consensus        54 -~~d~v~~~a~~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~~a~----~~~v~~~i~~SS~~vy  110 (315)
T d1e6ua_          54 -RIDQVYLAAAKVGGIV-----ANNTYPADFIYQNMMIESNIIHAAH----QNDVNKLLFLGSSCIY  110 (315)
T ss_dssp             -CCSEEEECCCCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEECCGGGS
T ss_pred             -CCCEEEEcchhccccc-----cchhhHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEECCceEc
Confidence             5889999997654311     1334445678899999999888754    3455689999998753

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.02  E-value=2e-09  Score=87.73  Aligned_cols=127  Identities=15%  Similarity=0.205  Sum_probs=86.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHH-cCCeEEEEec---------ChhHHHHHHHHHHhh------CCCceeEEEEEecccCcc
Q 045749           65 WALITGATDGIGKAFAHQLAQ-HGLNLILVSR---------NHNKLEKISNEIQAE------NPNTQINIVEYDFSCDVV  128 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~-~G~~Vi~~~r---------~~~~l~~~~~~l~~~------~~~~~~~~~~~D~~~~~~  128 (210)
                      .|+||||+|-||..++++|++ .|++|+++|+         ..+..++....+...      ..+....++..|+++.  
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~--   81 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE--   81 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH--
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH--
Confidence            589999999999999999985 7899999874         112233333333321      1134577788888766  


Q ss_pred             chhhHHHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          129 SAGNIKAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                        +.++++.+...  ++|+++|.|+......      ..+.....+++|+.++..+.+++.    +.+..++++++|..
T Consensus        82 --~~l~~~~~~~~--~~d~ViH~Aa~~~~~~------~~~~~~~~~~~N~~~t~~~l~~~~----~~~~~~~~~~~s~~  146 (383)
T d1gy8a_          82 --DFLNGVFTRHG--PIDAVVHMCAFLAVGE------SVRDPLKYYDNNVVGILRLLQAML----LHKCDKIIFSSSAA  146 (383)
T ss_dssp             --HHHHHHHHHSC--CCCEEEECCCCCCHHH------HHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGG
T ss_pred             --HHhhhhhhccc--eeehhhcccccccccc------cccccccccccccccccccchhhh----ccCCcccccccccc
Confidence              34455554444  5899999999754321      334456688999999999988864    34556777776654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.01  E-value=5.1e-10  Score=90.58  Aligned_cols=121  Identities=14%  Similarity=-0.004  Sum_probs=83.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ++..|+||||+|-||.+++++|.++|++|+++++...+-      ....  .....+...|+.+.       +.+.+...
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~------~~~~--~~~~~~~~~D~~~~-------~~~~~~~~   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------MTED--MFCDEFHLVDLRVM-------ENCLKVTE   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS------SCGG--GTCSEEEECCTTSH-------HHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc------hhhh--cccCcEEEeechhH-------HHHHHHhh
Confidence            356799999999999999999999999999998754321      0000  12234444555433       33444444


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                        .+|.+||.|+......     .+.+.....+++|+.++..+..++.    +.+..++|++||.+.
T Consensus        79 --~~d~Vih~a~~~~~~~-----~~~~~~~~~~~~n~~gt~~ll~~~~----~~~vk~~i~~SS~~~  134 (363)
T d2c5aa1          79 --GVDHVFNLAADMGGMG-----FIQSNHSVIMYNNTMISFNMIEAAR----INGIKRFFYASSACI  134 (363)
T ss_dssp             --TCSEEEECCCCCCCHH-----HHTTCHHHHHHHHHHHHHHHHHHHH----HTTCSEEEEEEEGGG
T ss_pred             --cCCeEeeccccccccc-----ccccccccccccccchhhHHHHhHH----hhCcccccccccccc
Confidence              5889999998754421     1233455688999999998888854    345578999999764

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.99  E-value=8.8e-10  Score=83.20  Aligned_cols=121  Identities=18%  Similarity=0.092  Sum_probs=79.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCe--EEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLN--LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~--Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ++|+||||+|.||++++++|+++|++  |+...|++++.+..         ...+..+.+|+++.       +...+.+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~---------~~~~~~~~~d~~~~-------~~~~~~~~   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDA-------DSINPAFQ   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSH-------HHHHHHHT
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc---------cCCcEEEEeeeccc-------cccccccc
Confidence            58999999999999999999999976  55567887654321         33556777777655       23444454


Q ss_pred             CCCccEEEEcCCCCCCCccc-------ccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          142 GLEVGVLINNVGITYPKAMF-------FHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~-------~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                        .+|.+||+|+........       ..+...........+|+.++..+......    ...++....++.
T Consensus        68 --~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~  133 (252)
T d2q46a1          68 --GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGSM  133 (252)
T ss_dssp             --TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEET
T ss_pred             --cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccc----cccccccccccc
Confidence              478999999875431110       11112233445678899998887766543    344666666654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.96  E-value=3.1e-10  Score=91.46  Aligned_cols=122  Identities=11%  Similarity=0.124  Sum_probs=79.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh--hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH--NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      -|.||||||+|-||..++++|.++|+.|.+++++.  ....  ...+.. ....++.++.+|+.+.       +.+.+..
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~--~~~~~~-~~~~~i~~~~~Di~d~-------~~~~~~~   71 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--KANLEA-ILGDRVELVVGDIADA-------ELVDKLA   71 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGTGG-GCSSSEEEEECCTTCH-------HHHHHHH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCcccc--HHHHHH-hhcCCeEEEEccCCCH-------HHHHHHH
Confidence            36799999999999999999999998765554421  0000  000111 1245778888888655       3333334


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      .  ..|.+++.|+......      ..++.++.+++|+.|+.++...+...    + .++|++||.+
T Consensus        72 ~--~~~~v~~~a~~~~~~~------~~~~~~~~~~~N~~g~~nll~~~~~~----~-~k~i~~ss~~  125 (346)
T d1oc2a_          72 A--KADAIVHYAAESHNDN------SLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDE  125 (346)
T ss_dssp             T--TCSEEEECCSCCCHHH------HHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGG
T ss_pred             h--hhhhhhhhhhcccccc------hhhCcccceeeehHhHHhhhhhhccc----c-ccccccccce
Confidence            4  3667889888654321      23344578899999999998876442    2 4677777664

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.88  E-value=1.9e-09  Score=85.91  Aligned_cols=123  Identities=13%  Similarity=0.190  Sum_probs=81.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEE------EEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLI------LVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi------~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .++||||+|-||.+++++|.++|+.|.      ..++.......  ..+........+.++..|.++.       .....
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~-------~~~~~   72 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPVDADPRLRFVHGDIRDA-------GLLAR   72 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGGTTCTTEEEEECCTTCH-------HHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhhhcCCCeEEEEeccccc-------hhhhc
Confidence            489999999999999999999997643      33322110000  0111111245677888776555       22222


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      ...  ..|.++|.|+.....      ...+..++.+++|+.|+.++.+++.    +.+..++|++||.+.
T Consensus        73 ~~~--~~d~vi~~a~~~~~~------~~~~~~~~~~~~N~~gt~~ll~~~~----~~~~~~~I~~Ss~~~  130 (322)
T d1r6da_          73 ELR--GVDAIVHFAAESHVD------RSIAGASVFTETNVQGTQTLLQCAV----DAGVGRVVHVSTNQV  130 (322)
T ss_dssp             HTT--TCCEEEECCSCCCHH------HHHHCCHHHHHHHTHHHHHHHHHHH----HTTCCEEEEEEEGGG
T ss_pred             ccc--ccceEEeeccccccc------ccccchHHHhhhhHHHHHHHHHHHH----HcCCceEEEeeccee
Confidence            333  588999999875432      2344556678999999999988864    345578999999764

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.80  E-value=1.1e-09  Score=85.47  Aligned_cols=105  Identities=20%  Similarity=0.170  Sum_probs=69.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      .+|||||+|-||.+++++|.++|. ++.++++...                   +..|+++.    +.++++.+..   +
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-------------------~~~Dl~~~----~~~~~~i~~~---~   54 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-------------------FCGDFSNP----KGVAETVRKL---R   54 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-------------------SCCCTTCH----HHHHHHHHHH---C
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-------------------ccCcCCCH----HHHHHHHHHc---C
Confidence            389999999999999999999985 4455554321                   11355544    3334433333   5


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEecccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGA  207 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~a  207 (210)
                      +|++||+||......      +.++-+..+++|..++..+.+++.     +...++++.||..
T Consensus        55 ~D~Vih~Aa~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~~ss~~  106 (298)
T d1n2sa_          55 PDVIVNAAAHTAVDK------AESEPELAQLLNATSVEAIAKAAN-----ETGAWVVHYSTDY  106 (298)
T ss_dssp             CSEEEECCCCCCHHH------HTTCHHHHHHHHTHHHHHHHHHHT-----TTTCEEEEEEEGG
T ss_pred             CCEEEEecccccccc------cccCccccccccccccccchhhhh-----ccccccccccccc
Confidence            899999999764321      122234678999999988888752     3346778777764

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.80  E-value=6.4e-09  Score=77.83  Aligned_cols=111  Identities=14%  Similarity=0.168  Sum_probs=73.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|+++||||+|-||++++++|.++|.  +|+...|++..          .  ..++   ..+..+       ..++.+..
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~--~~~~---~~~~~d-------~~~~~~~~   59 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRL---DNPVGP-------LAELLPQL   59 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTE---ECCBSC-------HHHHGGGC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------h--cccc---cccccc-------hhhhhhcc
Confidence            47899999999999999999999997  56666665321          0  1111   111111       12333333


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccccc
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSGAA  208 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~ag  208 (210)
                      .. .+|.+|+++|.....     ..+   -+...++|+.++..+++.+    ++.+-.+++++||..+
T Consensus        60 ~~-~~d~vi~~~g~~~~~-----~~~---~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~  114 (212)
T d2a35a1          60 DG-SIDTAFCCLGTTIKE-----AGS---EEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGA  114 (212)
T ss_dssp             CS-CCSEEEECCCCCHHH-----HSS---HHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTC
T ss_pred             cc-chheeeeeeeeeccc-----ccc---ccccccchhhhhhhccccc----cccccccccccccccc
Confidence            22 589999999864321     112   2357888999998888875    4456678999998764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.75  E-value=8.6e-09  Score=79.86  Aligned_cols=101  Identities=21%  Similarity=0.229  Sum_probs=69.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      .++||||+|-||.+++++|.++|++|+.++|++                       .|+.+.    +.++++.+..   +
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~----~~~~~~l~~~---~   52 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNV----LAVNKFFNEK---K   52 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCH----HHHHHHHHHH---C
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCH----HHHHHHHHHc---C
Confidence            389999999999999999999999999999853                       244443    3334444333   5


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEeccc
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIGSG  206 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~isS~  206 (210)
                      +|++||+|+.....      ......+..++.|......+.......     ...+++.||.
T Consensus        53 ~d~vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~ss~  103 (281)
T d1vl0a_          53 PNVVINCAAHTAVD------KCEEQYDLAYKINAIGPKNLAAAAYSV-----GAEIVQISTD  103 (281)
T ss_dssp             CSEEEECCCCCCHH------HHHHCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEG
T ss_pred             CCEEEeeccccccc------cccccchhhcccccccccccccccccc-----cccccccccc
Confidence            78999999865431      233444567788888887776665432     2455555554

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.70  E-value=2.7e-08  Score=77.80  Aligned_cols=82  Identities=18%  Similarity=0.145  Sum_probs=55.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH-HHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI-SNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~-~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      ++|+||||+|-||++++++|.++|++|+++.|+....... .+.+... ....+.++.+|+.+.       ..+.+.+. 
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~-~~~~v~~v~~d~~d~-------~~~~~~~~-   74 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF-KQLGAKLIEASLDDH-------QRLVDALK-   74 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH-HTTTCEEECCCSSCH-------HHHHHHHT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhh-ccCCcEEEEeecccc-------hhhhhhcc-
Confidence            4599999999999999999999999999999975432111 1111111 134567777777665       33444454 


Q ss_pred             CCccEEEEcCCCC
Q 045749          143 LEVGVLINNVGIT  155 (210)
Q Consensus       143 ~~id~lvnnAg~~  155 (210)
                       ..+.++++++..
T Consensus        75 -~~~~~~~~~~~~   86 (312)
T d1qyda_          75 -QVDVVISALAGG   86 (312)
T ss_dssp             -TCSEEEECCCCS
T ss_pred             -Ccchhhhhhhhc
Confidence             366788888653

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.64  E-value=2.3e-07  Score=74.19  Aligned_cols=78  Identities=15%  Similarity=0.153  Sum_probs=55.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +.|+++||||+|.||.+++++|.++|++|+++.|+..+...  +++..   ...+..+..|+.++.      ..+...+.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~---~~~v~~~~gD~~d~~------~~~~~a~~   70 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA---IPNVTLFQGPLLNNV------PLMDTLFE   70 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT---STTEEEEESCCTTCH------HHHHHHHT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc---cCCCEEEEeeCCCcH------HHHHHHhc
Confidence            46899999999999999999999999999999998765432  22222   345778888887762      22333444


Q ss_pred             CCCccEEEEcC
Q 045749          142 GLEVGVLINNV  152 (210)
Q Consensus       142 ~~~id~lvnnA  152 (210)
                        ..|..+.+.
T Consensus        71 --~~~~~~~~~   79 (350)
T d1xgka_          71 --GAHLAFINT   79 (350)
T ss_dssp             --TCSEEEECC
T ss_pred             --CCceEEeec
Confidence              355665554

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.61  E-value=5e-08  Score=71.27  Aligned_cols=46  Identities=28%  Similarity=0.402  Sum_probs=42.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN  111 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~  111 (210)
                      +.|+||+|++|+++|+.|++.|++|++++|++++++++.+++....
T Consensus         3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            5677888999999999999999999999999999999999987654

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.44  E-value=2.8e-06  Score=61.37  Aligned_cols=80  Identities=16%  Similarity=0.187  Sum_probs=58.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|...++-....|++|+.+++++++.+.++ ++     +.. +  ..|.+++    +..+++.+..+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l-----Ga~-~--vi~~~~~----d~~~~v~~~t~   94 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA-----GAW-Q--VINYREE----DLVERLKEITG   94 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCS-E--EEETTTS----CHHHHHHHHTT
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc-----CCe-E--EEECCCC----CHHHHHHHHhC
Confidence            3889999999999999999998899999999999998876543 22     222 1  1344443    34456666555


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|++++++|.
T Consensus        95 g~g~d~v~d~~g~  107 (179)
T d1qora2          95 GKKVRVVYDSVGR  107 (179)
T ss_dssp             TCCEEEEEECSCG
T ss_pred             CCCeEEEEeCccH
Confidence            5579999998874

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.40  E-value=4.6e-07  Score=66.08  Aligned_cols=79  Identities=11%  Similarity=0.212  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++|+|...++-....|++|+.+++++++.+.+    ++.  +....   .|..++    ...+.+.+...
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~----~~~--Ga~~v---i~~~~~----~~~~~~~~~~~   95 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL----KQI--GFDAA---FNYKTV----NSLEEALKKAS   95 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHT--TCSEE---EETTSC----SCHHHHHHHHC
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHH----Hhh--hhhhh---cccccc----cHHHHHHHHhh
Confidence            489999999999999999999999999999999998775443    332  22111   233332    22344555555


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      ...+|+++++.|
T Consensus        96 ~~Gvd~v~D~vG  107 (182)
T d1v3va2          96 PDGYDCYFDNVG  107 (182)
T ss_dssp             TTCEEEEEESSC
T ss_pred             cCCCceeEEecC
Confidence            446999999987

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=1.6e-06  Score=62.60  Aligned_cols=79  Identities=15%  Similarity=0.269  Sum_probs=57.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||++++|...++.....|++|+++++++++.+.+.    +.  +... +  .|.+++    +..+++.+..+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~----~~--Ga~~-v--i~~~~~----~~~~~i~~~t~   94 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL----QN--GAHE-V--FNHREV----NYIDKIKKYVG   94 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HT--TCSE-E--EETTST----THHHHHHHHHC
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccc----cc--Cccc-c--cccccc----cHHHHhhhhhc
Confidence            4889999999999999999888889999999999877655432    22  2211 1  244333    44566777666


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      +..+|+++++.|
T Consensus        95 ~~g~d~v~d~~g  106 (174)
T d1yb5a2          95 EKGIDIIIEMLA  106 (174)
T ss_dssp             TTCEEEEEESCH
T ss_pred             cCCceEEeeccc
Confidence            657999998876

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.32  E-value=6.1e-07  Score=69.28  Aligned_cols=82  Identities=24%  Similarity=0.291  Sum_probs=53.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH--HHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE--KISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|+++||||+|-||++++++|.++|++|++++|+.....  +..+.+.... ...+.++..|+.+.       ....+.+
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-------~~~~~~~   74 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDH-------ASLVEAV   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCH-------HHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccc-------hhhhhhh
Confidence            467999999999999999999999999999999754321  1111222211 23455666666554       2222333


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      .  ..+.++++++.
T Consensus        75 ~--~~~~vi~~~~~   86 (307)
T d1qyca_          75 K--NVDVVISTVGS   86 (307)
T ss_dssp             H--TCSEEEECCCG
T ss_pred             h--hceeeeecccc
Confidence            3  35677887764

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.30  E-value=2.3e-06  Score=62.06  Aligned_cols=79  Identities=23%  Similarity=0.252  Sum_probs=57.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++++|+||+||+|...++.....|++|+++++++++.+.    +++.  +... +  .|..+    ++..+++.+..+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~----l~~~--Ga~~-v--i~~~~----~~~~~~v~~~t~   91 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM----LSRL--GVEY-V--GDSRS----VDFADEILELTD   91 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHTT--CCSE-E--EETTC----STHHHHHHHHTT
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc----cccc--cccc-c--ccCCc----cCHHHHHHHHhC
Confidence            38899999999999999999888899999999998776543    3333  2221 1  23332    244566666665


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      +..+|++++++|
T Consensus        92 ~~g~d~v~d~~g  103 (183)
T d1pqwa_          92 GYGVDVVLNSLA  103 (183)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCEEEEEeccc
Confidence            557999999987

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.22  E-value=3.6e-06  Score=61.23  Aligned_cols=84  Identities=20%  Similarity=0.298  Sum_probs=57.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHH---HHHhhCCCceeEEEEEecccCccchhhHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISN---EIQAENPNTQINIVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~---~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  134 (210)
                      .++++|.|+|.|+ +|.|++++..|++.|+ ++++++|+.++.+++.+   ++....   .......|+.+.       +
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~-------~   82 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT---DCVVTVTDLADQ-------Q   82 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS---SCEEEEEETTCH-------H
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc---CcceEeeecccc-------c
Confidence            4567999999998 7999999999999998 58899998776665544   343332   222233344333       3


Q ss_pred             HHHHHhcCCCccEEEEcCCCC
Q 045749          135 AIEMAIDGLEVGVLINNVGIT  155 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~  155 (210)
                      .+.+...  +.|++||+....
T Consensus        83 ~~~~~~~--~~diiIN~Tp~G  101 (182)
T d1vi2a1          83 AFAEALA--SADILTNGTKVG  101 (182)
T ss_dssp             HHHHHHH--TCSEEEECSSTT
T ss_pred             chhhhhc--ccceeccccCCc
Confidence            3444444  578999997654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.17  E-value=1.4e-06  Score=67.51  Aligned_cols=104  Identities=14%  Similarity=0.205  Sum_probs=58.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLE  144 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~  144 (210)
                      ||||||+|-||..++++|+++|+ .|+++++-....+ .. .+.+    ...    +|..+.   ...............
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~-~~-~~~~----~~~----~~~~~~---~~~~~~~~~~~~~~~   68 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV-NLVD----LNI----ADYMDK---EDFLIQIMAGEEFGD   68 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GH-HHHT----SCC----SEEEEH---HHHHHHHHTTCCCSS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcch-hh-cccc----cch----hhhccc---hHHHHHHhhhhcccc
Confidence            79999999999999999999996 5888764222110 00 1111    110    111111   122222222222225


Q ss_pred             ccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHH
Q 045749          145 VGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLT  190 (210)
Q Consensus       145 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~  190 (210)
                      .+++++.|+.....     ..+.   +...+.|+.+...+.+++..
T Consensus        69 ~~~i~~~aa~~~~~-----~~~~---~~~~~~~~~~~~~~l~~~~~  106 (307)
T d1eq2a_          69 VEAIFHEGACSSTT-----EWDG---KYMMDNNYQYSKELLHYCLE  106 (307)
T ss_dssp             CCEEEECCSCCCTT-----CCCH---HHHHHHTHHHHHHHHHHHHH
T ss_pred             hhhhhhhccccccc-----cccc---cccccccccccccccccccc
Confidence            77888888754332     2222   34677788888777766543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.13  E-value=1.5e-05  Score=56.93  Aligned_cols=82  Identities=22%  Similarity=0.236  Sum_probs=53.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      |.+++|+| ++++|...++.+...|++|+++++++++++.+.+    .  +.... +..|- .+....+..+.+.+..+.
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~----~--ga~~~-~~~~~-~~~~~~~~~~~~~~~~g~   97 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----C--GADVT-LVVDP-AKEEESSIIERIRSAIGD   97 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----T--TCSEE-EECCT-TTSCHHHHHHHHHHHSSS
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH----c--CCcEE-Eeccc-cccccchhhhhhhccccc
Confidence            77899997 6899999998888899999999999988765432    2  22211 11111 111222333445444443


Q ss_pred             CCccEEEEcCCC
Q 045749          143 LEVGVLINNVGI  154 (210)
Q Consensus       143 ~~id~lvnnAg~  154 (210)
                       .+|++|.++|.
T Consensus        98 -g~D~vid~~g~  108 (170)
T d1e3ja2          98 -LPNVTIDCSGN  108 (170)
T ss_dssp             -CCSEEEECSCC
T ss_pred             -CCceeeecCCC
Confidence             68999999874

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.13  E-value=3.5e-06  Score=61.07  Aligned_cols=78  Identities=17%  Similarity=0.143  Sum_probs=51.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|++|+|+||+||.|....+-....|++|+.+++++++.+.+.    +.  +....   .|.+++      ..+..+...
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~----~l--Ga~~v---i~~~~~------~~~~~~~~~   95 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----VL--GAKEV---LAREDV------MAERIRPLD   95 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----HT--TCSEE---EECC---------------CC
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH----hc--cccee---eecchh------HHHHHHHhh
Confidence            3889999999999999988888889999999999988865443    22  22221   122211      122233344


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|+++++.|.
T Consensus        96 ~~gvD~vid~vgg  108 (176)
T d1xa0a2          96 KQRWAAAVDPVGG  108 (176)
T ss_dssp             SCCEEEEEECSTT
T ss_pred             ccCcCEEEEcCCc
Confidence            4479999999884

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=98.11  E-value=1.1e-05  Score=58.33  Aligned_cols=82  Identities=21%  Similarity=0.229  Sum_probs=56.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|+|+ +++|...++.....|+ +|+++++++++++.+ +++     +...   ..|..++ ...+..+.+.+..
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~-~~~~~~~~i~~~~   96 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI-----GADL---TLNRRET-SVEERRKAIMDIT   96 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT-----TCSE---EEETTTS-CHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc-----cceE---EEecccc-chHHHHHHHHHhh
Confidence            4899999987 8999999988888998 799999999887643 222     2211   1233333 2333345555555


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      .+..+|++|.++|.
T Consensus        97 ~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          97 HGRGADFILEATGD  110 (182)
T ss_dssp             TTSCEEEEEECSSC
T ss_pred             CCCCceEEeecCCc
Confidence            54469999999875

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.08  E-value=1.4e-05  Score=56.83  Aligned_cols=84  Identities=13%  Similarity=0.291  Sum_probs=59.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      ++++.++|.|+ |++|+.+++.|..+|+ ++.++.|+.++.+++.+++.     ...    .+          ++++.+.
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~-----~~~----~~----------~~~~~~~   81 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG-----GEA----VR----------FDELVDH   81 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT-----CEE----CC----------GGGHHHH
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh-----ccc----cc----------chhHHHH
Confidence            45899999998 9999999999999998 59999999998887776652     111    01          1233344


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHH
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMD  172 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~  172 (210)
                      +.  ..|++|++.+...+      -.+.+.++.
T Consensus        82 l~--~~Divi~atss~~~------ii~~~~i~~  106 (159)
T d1gpja2          82 LA--RSDVVVSATAAPHP------VIHVDDVRE  106 (159)
T ss_dssp             HH--TCSEEEECCSSSSC------CBCHHHHHH
T ss_pred             hc--cCCEEEEecCCCCc------cccHhhhHH
Confidence            44  48899999875432      235565543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.08  E-value=1.2e-05  Score=58.63  Aligned_cols=87  Identities=22%  Similarity=0.302  Sum_probs=55.7

Q ss_pred             Cc-EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GS-WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk-~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      |+ +++++||+||+|.+.++-....|++|+.+.|+.++.++..+.+++.+  ... ++..|-.+.....+.++++.+..+
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lG--ad~-vi~~~~~~~~~~~~~v~~~~~~~g  105 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELG--ATQ-VITEDQNNSREFGPTIKEWIKQSG  105 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHT--CSE-EEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcc--ccE-EEeccccchhHHHHHHHHHHhhcc
Confidence            54 55557999999999988888889999999998888877777777653  221 111111112122222333333333


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      + .+|+++++.|
T Consensus       106 ~-~vdvv~D~vg  116 (189)
T d1gu7a2         106 G-EAKLALNCVG  116 (189)
T ss_dssp             C-CEEEEEESSC
T ss_pred             C-CceEEEECCC
Confidence            3 6899998876

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.99  E-value=5.5e-05  Score=54.35  Aligned_cols=80  Identities=14%  Similarity=0.115  Sum_probs=52.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|.+|+|.|+ +|+|...+......|+ +|+++++++++++-. +++     +... .  .|....   ++..+...+..
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~-----Ga~~-~--i~~~~~---~~~~~~~~~~~   94 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL-----GATD-C--LNPREL---DKPVQDVITEL   94 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT-----TCSE-E--ECGGGC---SSCHHHHHHHH
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHh-----CCCc-c--cCCccc---hhhhhhhHhhh
Confidence            4889999975 9999999999999998 478889998886433 222     2211 1  222222   22233444444


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      .+..+|++|.++|.
T Consensus        95 ~~~G~d~vie~~G~  108 (174)
T d1e3ia2          95 TAGGVDYSLDCAGT  108 (174)
T ss_dssp             HTSCBSEEEESSCC
T ss_pred             hcCCCcEEEEeccc
Confidence            44479999999984

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.97  E-value=2e-05  Score=56.26  Aligned_cols=80  Identities=15%  Similarity=0.150  Sum_probs=55.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|++++|.|+++++|...+..+...|+ +|+++++++++++.+.+    .  +... .  .|.+++    +..+++.+..
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~----~--Ga~~-~--i~~~~~----~~~~~~~~~~   93 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----A--GADY-V--INASMQ----DPLAEIRRIT   93 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----H--TCSE-E--EETTTS----CHHHHHHHHT
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH----c--CCce-e--eccCCc----CHHHHHHHHh
Confidence            378999999999999999999888885 79999999887665432    2  2221 1  233222    3345565555


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      .+..+|+++.++|.
T Consensus        94 ~~~~~d~vid~~g~  107 (170)
T d1jvba2          94 ESKGVDAVIDLNNS  107 (170)
T ss_dssp             TTSCEEEEEESCCC
T ss_pred             hcccchhhhccccc
Confidence            54469999999875

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.94  E-value=1.1e-05  Score=50.09  Aligned_cols=42  Identities=24%  Similarity=0.371  Sum_probs=37.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      +++.++|+||++|.|....+.+...|++|+.+.+++++.+-+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            378899999999999999998888999999999998887654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=5.6e-05  Score=53.92  Aligned_cols=80  Identities=19%  Similarity=0.236  Sum_probs=54.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      |.+++|.|+ +++|...+..+...|+ +|+++++++++++.+. ++     +....   .+ .++.+..+..+.+....+
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~-----Ga~~~---~~-~~~~~~~~~~~~~~~~~g   95 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GADLV---LQ-ISKESPQEIARKVEGQLG   95 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCSEE---EE-CSSCCHHHHHHHHHHHHT
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh-----CCccc---cc-ccccccccccccccccCC
Confidence            778999986 9999999999989999 6999999998876542 22     22211   11 222233333444555554


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      . .+|++|.++|.
T Consensus        96 ~-g~Dvvid~~G~  107 (171)
T d1pl8a2          96 C-KPEVTIECTGA  107 (171)
T ss_dssp             S-CCSEEEECSCC
T ss_pred             C-CceEEEeccCC
Confidence            3 68999999874

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.90  E-value=2.4e-05  Score=56.29  Aligned_cols=78  Identities=15%  Similarity=0.108  Sum_probs=54.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      |.+|+|.|+ +|+|...++.....|+ +|+++++++++++.+. ++     +.. +  ..|..++    ...+++.+..+
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l-----Ga~-~--~i~~~~~----~~~~~v~~~t~   93 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY-----GAT-D--ILNYKNG----HIEDQVMKLTN   93 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH-----TCS-E--EECGGGS----CHHHHHHHHTT
T ss_pred             CCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh-----Ccc-c--cccccch----hHHHHHHHHhh
Confidence            788999986 8999998888888998 6999999988866543 23     221 1  1233332    33456666665


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|++|.++|.
T Consensus        94 g~G~D~vid~~g~  106 (174)
T d1jqba2          94 GKGVDRVIMAGGG  106 (174)
T ss_dssp             TSCEEEEEECSSC
T ss_pred             ccCcceEEEccCC
Confidence            5469999999985

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.90  E-value=7.6e-06  Score=58.54  Aligned_cols=43  Identities=16%  Similarity=0.267  Sum_probs=38.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNE  106 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~  106 (210)
                      +|.++|.|| |.+|+.+|+.|+++|++|++++|+.++++++.++
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~   44 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG   44 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc
Confidence            688999887 9999999999999999999999999988876543

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.89  E-value=6.1e-05  Score=53.97  Aligned_cols=79  Identities=22%  Similarity=0.290  Sum_probs=55.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ....+|.++|-|+ ||.+++++..|.+.+.+|+++.|+.+++++..+.+....   .+....  ..+.            
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~---~~~~~~--~~~~------------   75 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG---NIQAVS--MDSI------------   75 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS---CEEEEE--GGGC------------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc---ccchhh--hccc------------
Confidence            3556999999876 888999999999988899999999999998888775432   222221  1100            


Q ss_pred             HhcCCCccEEEEcCCCCCC
Q 045749          139 AIDGLEVGVLINNVGITYP  157 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~  157 (210)
                      ...  +.|++||+......
T Consensus        76 ~~~--~~diiIN~tp~g~~   92 (171)
T d1p77a1          76 PLQ--TYDLVINATSAGLS   92 (171)
T ss_dssp             CCS--CCSEEEECCCC---
T ss_pred             ccc--ccceeeeccccccc
Confidence            011  58899999876543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.89  E-value=3.3e-05  Score=55.35  Aligned_cols=42  Identities=21%  Similarity=0.283  Sum_probs=37.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|+||++++|...++.....|++|+.+++++++.+.+
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~   68 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP   68 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccc
Confidence            488999999999999999888888999999999998776543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.85  E-value=2.3e-05  Score=56.97  Aligned_cols=78  Identities=15%  Similarity=0.193  Sum_probs=51.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEE-EEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLI-LVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi-~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +++|+|+||+||+|...++-....|++++ .++.++++.+++.+++     +..   ...|..++    ...+.+.+..+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-----gad---~vi~~~~~----~~~~~~~~~~~   98 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-----GFD---AAVNYKTG----NVAEQLREACP   98 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-----CCS---EEEETTSS----CHHHHHHHHCT
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-----cce---EEeeccch----hHHHHHHHHhc
Confidence            58999999999999998888777999754 4566766655554443     221   11344433    33344444443


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                       ..+|+++.+.|
T Consensus        99 -~GvDvv~D~vG  109 (187)
T d1vj1a2          99 -GGVDVYFDNVG  109 (187)
T ss_dssp             -TCEEEEEESSC
T ss_pred             -cCceEEEecCC
Confidence             36999999887

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.82  E-value=7.9e-06  Score=58.62  Aligned_cols=41  Identities=24%  Similarity=0.434  Sum_probs=36.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      |++|+|+||++|.|...++.....|++|+.+.+++++.+.+
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            66899999999999999887778899999999998886654

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.74  E-value=8.9e-05  Score=53.07  Aligned_cols=80  Identities=18%  Similarity=0.189  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|.+|+|.|+ +|+|...+.++...|+ +|+++++++++.+...+ +     +... .  .|..+.   ++.+++..+..
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~-----Ga~~-~--i~~~~~---~~~~~~~~~~~   94 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-V-----GATE-C--VNPQDY---KKPIQEVLTEM   94 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TCSE-E--ECGGGC---SSCHHHHHHHH
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-h-----CCee-E--EecCCc---hhHHHHHHHHH
Confidence            3889999999 7899999999999985 79999999988764422 1     2111 1  122221   12234444444


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ....+|++|.+.|.
T Consensus        95 ~~~G~D~vid~~G~  108 (176)
T d2jhfa2          95 SNGGVDFSFEVIGR  108 (176)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             hcCCCCEEEecCCc
Confidence            43468999998875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.70  E-value=0.00018  Score=51.57  Aligned_cols=80  Identities=20%  Similarity=0.265  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|.+++|.|+ +|+|...+..+...|+ +|+++|+++++++-.. ++     +....   .|..+.+..   .+.+.+..
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~-----GA~~~---in~~~~~~~---~~~~~~~~   95 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AV-----GATEC---ISPKDSTKP---ISEVLSEM   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HH-----TCSEE---ECGGGCSSC---HHHHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hc-----CCcEE---ECccccchH---HHHHHHHh
Confidence            4889999986 8999999999999995 7999999999987543 33     22211   233322211   23333333


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      .+..+|+++.+.|.
T Consensus        96 ~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          96 TGNNVGYTFEVIGH  109 (176)
T ss_dssp             HTSCCCEEEECSCC
T ss_pred             ccccceEEEEeCCc
Confidence            33368999998874

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.65  E-value=0.00016  Score=49.25  Aligned_cols=54  Identities=22%  Similarity=0.420  Sum_probs=42.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      +++|.|+ |-+|+.++++|.++|..|++++++++..++..++.       ...++..|.+++
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-------~~~vi~Gd~~~~   55 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-------DALVINGDCTKI   55 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------SSEEEESCTTSH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-------hhhhccCcccch
Confidence            4788887 99999999999999999999999998887654431       234555666554

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.64  E-value=0.00062  Score=47.23  Aligned_cols=113  Identities=12%  Similarity=0.295  Sum_probs=66.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+++.|.|+ |.+|..+|..++.+|  .+|++.|+++++.+....++..... .........|.              +.
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~--------------~~   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY--------------SD   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG--------------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH--------------HH
Confidence            345777786 899999999999988  4799999999888777777765311 11122222111              11


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                      ..  +-|++|.+||.... +    ..+   -.+.++.|.    .+.+...+.+.+.. ++.++++|
T Consensus        70 ~~--~adivvitag~~~~-~----g~~---r~~l~~~N~----~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          70 CK--DADLVVITAGAPQK-P----GES---RLDLVNKNL----NILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             GT--TCSEEEECCCC------------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             hc--cccEEEEecccccC-C----CCC---HHHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeC
Confidence            22  47899999986432 1    112   223455564    45556666666554 45555554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.63  E-value=0.0022  Score=44.29  Aligned_cols=115  Identities=23%  Similarity=0.307  Sum_probs=69.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChh--HHHHHHHHHHhhCC--CceeEEEEEecccCccchhhHHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL--NLILVSRNHN--KLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~--~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .+.|.||+|.+|..+|..++.+|.  ++++.|++++  +++....++.+...  ....+.... -+++   .       +
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-~~~d---~-------~   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVE-SDEN---L-------R   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEE-ETTC---G-------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccC-Ccch---H-------H
Confidence            378999999999999999999984  7999998863  45555666654211  111111110 0111   0       1


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCCCCEEEEec
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRKKGAIVNIG  204 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~~g~iv~is  204 (210)
                      ...  +-|++|.+||.... +    ..+..+   .++.|.    .+.+...+.+.+.....|+.+|
T Consensus        71 ~l~--~aDvVVitAG~~~~-~----g~sR~d---l~~~Na----~iv~~i~~~i~~~~~~~iivVt  122 (145)
T d1hyea1          71 IID--ESDVVIITSGVPRK-E----GMSRMD---LAKTNA----KIVGKYAKKIAEICDTKIFVIT  122 (145)
T ss_dssp             GGT--TCSEEEECCSCCCC-T----TCCHHH---HHHHHH----HHHHHHHHHHHHHCCCEEEECS
T ss_pred             Hhc--cceEEEEecccccC-C----CCChhh---hhhhhH----HHHHHHHHHHhccCCCeEEEEc
Confidence            222  47899999997532 2    234443   566664    4566666666665555565554

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.62  E-value=0.00025  Score=50.74  Aligned_cols=80  Identities=16%  Similarity=0.102  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|.+|+|.|+ +|+|...++.+...|+ +|+++++++++++...+ +     +....   .|.++.+   ..+.+..+..
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l-----Ga~~~---i~~~~~d---~~~~~~~~~~   93 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L-----GATEC---LNPKDYD---KPIYEVICEK   93 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T-----TCSEE---ECGGGCS---SCHHHHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c-----CCcEE---EcCCCch---hHHHHHHHHh
Confidence            3889999986 8999999999999997 68899999998865432 2     22211   2333322   1233444444


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      .+..+|++|.++|.
T Consensus        94 ~~~G~d~vid~~g~  107 (174)
T d1p0fa2          94 TNGGVDYAVECAGR  107 (174)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEEEEcCCC
Confidence            43368899988874

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.61  E-value=8e-05  Score=53.18  Aligned_cols=51  Identities=16%  Similarity=0.242  Sum_probs=44.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAE  110 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~  110 (210)
                      .+..||.++|-|+ ||.+++++..|.+.|++|.++.|+.++.+++.+.+...
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~   64 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT   64 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc
Confidence            4556999999987 89999999999999999999999999998887776543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.59  E-value=0.00023  Score=51.95  Aligned_cols=80  Identities=24%  Similarity=0.274  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|.+|+|.|+ +++|...+......|+ +|+++++++++++.+.+    .  +...    .+..   ...+..+++.+..
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~----~--Ga~~----~~~~---~~~~~~~~i~~~t   90 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----Q--GFEI----ADLS---LDTPLHEQIAALL   90 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----T--TCEE----EETT---SSSCHHHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh----c--cccE----EEeC---CCcCHHHHHHHHh
Confidence            3889999986 8999888877777777 68899999888764432    2  2221    1111   2233345566655


Q ss_pred             cCCCccEEEEcCCCC
Q 045749          141 DGLEVGVLINNVGIT  155 (210)
Q Consensus       141 ~~~~id~lvnnAg~~  155 (210)
                      .+..+|+++.+.|..
T Consensus        91 ~g~g~D~vid~vG~~  105 (195)
T d1kola2          91 GEPEVDCAVDAVGFE  105 (195)
T ss_dssp             SSSCEEEEEECCCTT
T ss_pred             CCCCcEEEEECcccc
Confidence            555799999999853

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.58  E-value=0.00023  Score=50.52  Aligned_cols=41  Identities=27%  Similarity=0.253  Sum_probs=35.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      .|++++|.|+ +++|...++.....|++|+++++++++++.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a   67 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA   67 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh
Confidence            3889999987 8999998877778899999999999887654

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.55  E-value=0.00032  Score=50.39  Aligned_cols=41  Identities=24%  Similarity=0.394  Sum_probs=36.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      +++++|+||+||+|...++.....|++|+.+++++++.+.+
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            56899999999999998888888999999999999886544

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.52  E-value=0.0027  Score=43.90  Aligned_cols=113  Identities=16%  Similarity=0.312  Sum_probs=70.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCC--CceeEEEEEecccCccchhhHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++.+.|.|| +.+|..+|..++.+|.  ++++.|+++++++....++.+...  .........|.              +
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~--------------~   70 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY--------------D   70 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG--------------G
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH--------------H
Confidence            567888897 9999999999999875  699999999988877777765421  12222211111              1


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEec
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIG  204 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~is  204 (210)
                      ...  +-|++|.+||......    + +..   +.+..|    ....+...+.+.+. .++.++++|
T Consensus        71 ~l~--daDvvvitag~~~~~~----~-~R~---dl~~~N----~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          71 DCR--DADLVVICAGANQKPG----E-TRL---DLVDKN----IAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             GTT--TCSEEEECCSCCCCTT----T-CSG---GGHHHH----HHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             Hhc--cceeEEEecccccccC----c-chh---HHHHHH----HHHHHHHHHHHHhhCCCceEEEec
Confidence            122  4679999999754321    1 222   233444    33455556655544 456777765

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.51  E-value=0.00069  Score=46.97  Aligned_cols=116  Identities=21%  Similarity=0.296  Sum_probs=69.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCC--CceeEEEEEecccCccchhhHHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      |.+.|.|+ |.+|..+|..++.+|.  ++++.|+++++++....++.+...  ........    .+   .       +.
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~----~d---~-------~~   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI----ND---W-------AA   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE----SC---G-------GG
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec----cC---H-------HH
Confidence            56778885 8999999999999884  699999999988777777765421  12222211    11   0       11


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                      ..  +-|++|.+||......    +-+.++=.+.++.|    ..+.+...+.+.+.. .+-++++|
T Consensus        67 l~--~adiVVitaG~~~~~~----~~~g~~R~~l~~~N----~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          67 LA--DADVVISTLGNIKLQQ----DNPTGDRFAELKFT----SSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             GT--TCSEEEECCSCGGGTC-----------CTTHHHH----HHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             hc--cccEEEEecccccccc----ccCCccHHHHHHHH----HHHHHHHHHHHhhcCCCeEEEEec
Confidence            22  4779999999753211    10111111234445    356677777776654 45566554

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=97.46  E-value=0.00027  Score=50.31  Aligned_cols=77  Identities=21%  Similarity=0.303  Sum_probs=51.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      |++++|.|+ +++|...+..+...|+ +|+++++++++++.+.+    .  +.. .+  .|.++     +..+...+...
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~----~--ga~-~~--i~~~~-----~~~~~~~~~~~   97 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----L--GAD-HV--VDARR-----DPVKQVMELTR   97 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----T--TCS-EE--EETTS-----CHHHHHHHHTT
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh----c--ccc-ee--ecCcc-----cHHHHHHHhhC
Confidence            789999886 9999999888887886 57778898877654432    2  221 11  23222     22344555544


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                      +..+|++|.++|.
T Consensus        98 ~~g~d~vid~~g~  110 (172)
T d1h2ba2          98 GRGVNVAMDFVGS  110 (172)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCceEEEEecCc
Confidence            4469999999985

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.46  E-value=0.00048  Score=49.08  Aligned_cols=78  Identities=19%  Similarity=0.248  Sum_probs=52.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeE-EEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNL-ILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~V-i~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|.+++|.|+ +++|...+..+...|+++ +++++++++++.+. ++     +.. .+  .|..++    +..+++.+..
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~-----Ga~-~~--i~~~~~----~~~~~i~~~t   93 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL-----GAT-HV--INSKTQ----DPVAAIKEIT   93 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH-----TCS-EE--EETTTS----CHHHHHHHHT
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-Hc-----CCe-EE--EeCCCc----CHHHHHHHHc
Confidence            3889999987 899999998888889865 56688887766543 33     221 11  233322    3345555554


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      ++ .+|++|.+.|.
T Consensus        94 ~g-g~D~vid~~G~  106 (174)
T d1f8fa2          94 DG-GVNFALESTGS  106 (174)
T ss_dssp             TS-CEEEEEECSCC
T ss_pred             CC-CCcEEEEcCCc
Confidence            44 69999999884

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.46  E-value=0.00031  Score=49.91  Aligned_cols=80  Identities=19%  Similarity=0.190  Sum_probs=50.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|.+|+|.|+ +|+|...++.+...|++ |+++++++++++.. +++     +...   ..|..++   .+.+.+..+..
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-k~l-----Ga~~---~i~~~~~---~~~~~~~~~~~   94 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEF-----GATE---CINPQDF---SKPIQEVLIEM   94 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHH-----TCSE---EECGGGC---SSCHHHHHHHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH-HHh-----CCcE---EEeCCch---hhHHHHHHHHH
Confidence            3889999998 59999999999889975 77778888776543 333     2211   1233322   12233343333


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      .+..+|+++.+.|.
T Consensus        95 ~~~g~D~vid~~G~  108 (176)
T d2fzwa2          95 TDGGVDYSFECIGN  108 (176)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEeeecCCC
Confidence            33369999999874

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.45  E-value=0.00015  Score=54.20  Aligned_cols=81  Identities=17%  Similarity=0.185  Sum_probs=54.8

Q ss_pred             ccCCcEEEEEcCC----------------ChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEec
Q 045749           60 KSYGSWALITGAT----------------DGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDF  123 (210)
Q Consensus        60 ~~~gk~vlITGas----------------sGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~  123 (210)
                      ++.|+.+|||+|.                |-.|.++|+++.++|++|+++.-....           .+...+..+..  
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~-----------~~p~~~~~~~~--   69 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-----------PTPPFVKRVDV--   69 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-----------CCCTTEEEEEC--
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc-----------Cccccccccee--
Confidence            3568999998764                478999999999999999998764321           01223333322  


Q ss_pred             ccCccchhhHHHHHHHhcCCCccEEEEcCCCCCCC
Q 045749          124 SCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYPK  158 (210)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~~  158 (210)
                         .+..+..+.+.+.+.  ..|++|.+|.+....
T Consensus        70 ---~t~~~m~~~~~~~~~--~~D~~i~aAAvsDf~   99 (223)
T d1u7za_          70 ---MTALEMEAAVNASVQ--QQNIFIGCAAVADYR   99 (223)
T ss_dssp             ---CSHHHHHHHHHHHGG--GCSEEEECCBCCSEE
T ss_pred             ---hhhHHHHHHHHhhhc--cceeEeeeechhhhh
Confidence               233444556666666  578999999987653

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.42  E-value=0.00073  Score=47.27  Aligned_cols=121  Identities=14%  Similarity=0.168  Sum_probs=70.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhC--CCceeEEEEEecccCccchhhHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAEN--PNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+++.|.|+ |.+|..+|..++..|. ++++.|.+++.++....++....  .+.......   +.+         .++.
T Consensus         7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~---------~~~~   73 (154)
T d1pzga1           7 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA---EYS---------YEAA   73 (154)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE---ECS---------HHHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec---cCc---------hhhh
Confidence            456677787 9999999999988884 79999999988877777765431  011111110   111         1122


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecc
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGS  205 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS  205 (210)
                      ..  +-|++|..||.......+-.+.+..+   .+..|.    .+++...+.+.+.. ++.++++|.
T Consensus        74 ~~--~adiVvitag~~~~~g~~~~~~tR~~---l~~~n~----~iv~~i~~~i~~~~p~aiviivsN  131 (154)
T d1pzga1          74 LT--GADCVIVTAGLTKVPGKPDSEWSRND---LLPFNS----KIIREIGQNIKKYCPKTFIIVVTN  131 (154)
T ss_dssp             HT--TCSEEEECCSCSSCTTCCGGGCCGGG---GHHHHH----HHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             hc--CCCeEEEecccccCCCCCCcccchhh---hhhhhH----HHHHHHHHHHHhcCCCcEEEEeCC
Confidence            33  47799999997643211111223332   344443    34555666555544 566666653

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.38  E-value=0.00044  Score=48.72  Aligned_cols=40  Identities=28%  Similarity=0.542  Sum_probs=34.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      |++++|.|+ +++|...++-+...|++|+++++++++++..
T Consensus        28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a   67 (166)
T d1llua2          28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA   67 (166)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence            789999876 9999998888888899999999999887644

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=97.37  E-value=0.00078  Score=47.74  Aligned_cols=80  Identities=20%  Similarity=0.152  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      .|.+++|.|+ +|+|...+..++..|+ +|+.+++++++++...+ +     +...   ..|..++...   .++..+..
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~-----GAd~---~in~~~~~~~---~~~~~~~~   94 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-F-----GATD---FVNPNDHSEP---ISQVLSKM   94 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TCCE---EECGGGCSSC---HHHHHHHH
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-c-----CCcE---EEcCCCcchh---HHHHHHhh
Confidence            3889999985 7888888888888877 58889999988765432 2     2211   1233333222   23444444


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      .+..+|+++.+.|.
T Consensus        95 ~~~G~d~vid~~G~  108 (175)
T d1cdoa2          95 TNGGVDFSLECVGN  108 (175)
T ss_dssp             HTSCBSEEEECSCC
T ss_pred             ccCCcceeeeecCC
Confidence            33368999999984

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.28  E-value=0.0056  Score=43.51  Aligned_cols=116  Identities=13%  Similarity=0.122  Sum_probs=67.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCh--hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGL-------NLILVSRNH--NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNI  133 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~-------~Vi~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~  133 (210)
                      ...|.||||+|+||..++..|++...       .+.+.+.++  +.++...-++....... ....  ..+.+       
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~-~~~~--~~~~~-------   93 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPL-LREV--SIGID-------   93 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT-EEEE--EEESC-------
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccccc-ccCc--ccccc-------
Confidence            34699999999999999999997532       355566544  44566655665432111 1111  11222       


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-C-CCEEEEec
Q 045749          134 KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-K-KGAIVNIG  204 (210)
Q Consensus       134 ~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~-~g~iv~is  204 (210)
                        ..+.+.  +.|++|..||.... +    ..+.++   .++.|.    .+.+...+.+.+. + ...|+.+|
T Consensus        94 --~~~~~~--~aDvVvi~ag~~rk-p----g~tR~D---ll~~N~----~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          94 --PYEVFE--DVDWALLIGAKPRG-P----GMERAA---LLDING----QIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             --HHHHTT--TCSEEEECCCCCCC-T----TCCHHH---HHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             --chhhcc--CCceEEEeeccCCC-C----CCcHHH---HHHHHH----HHHHHHHHHHHhhCCCCcEEEEec
Confidence              223344  58899999987533 2    335554   566663    4556666666653 3 34565554

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=0.0012  Score=46.46  Aligned_cols=40  Identities=18%  Similarity=0.228  Sum_probs=34.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      .|++|+|.|+ +|+|...++.....|++++++++++++.+.
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~   69 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA   69 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH
Confidence            3889999986 899999888777899999999999887653

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.26  E-value=0.0065  Score=42.51  Aligned_cols=117  Identities=17%  Similarity=0.208  Sum_probs=72.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCC-ceeEEEEEecccCccchhhHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPN-TQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      ...+.+.|.|+ |.+|..+|..++.+|.  ++++.|++++..+....++...... .......   +.+          .
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~---~~d----------~   83 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVA---DKD----------Y   83 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEE---CSS----------G
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEe---ccc----------h
Confidence            34567777786 9999999999999986  6999999998887777777652110 1111111   111          0


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecc
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGS  205 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS  205 (210)
                      +...  +-|++|..||.... +    ..+.+   +.++.|    ..+.+...|.+.+.. ++-++++|-
T Consensus        84 ~~~~--~adiVVitAg~~~~-~----g~tR~---~l~~~N----~~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          84 SVTA--NSKIVVVTAGVRQQ-E----GESRL---NLVQRN----VNVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             GGGT--TCSEEEECCSCCCC-T----TCCGG---GGHHHH----HHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             hhcc--cccEEEEecCCccc-c----CcchH---HHHHHH----HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            1122  46799999997543 2    22332   234444    346677777776654 566666653

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.24  E-value=0.0043  Score=42.64  Aligned_cols=111  Identities=17%  Similarity=0.268  Sum_probs=68.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCC-ceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPN-TQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +.|.|+ +.+|..+|..++.+|.  ++++.|+++++++....++...... ......   -+++      .+    ... 
T Consensus         4 i~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~---~~~~------~~----~~~-   68 (143)
T d1llda1           4 LAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSID---GSDD------PE----ICR-   68 (143)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEE---EESC------GG----GGT-
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceee---cCCC------HH----Hhh-
Confidence            556686 9999999999999885  6999999998887766677653111 111111   1122      01    122 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                       +-|++|..||.... +    ..+.++   .++.|.    .+.+...+.+.+.. ++.++++|
T Consensus        69 -daDvVVitaG~~~~-~----g~~R~d---l~~~N~----~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          69 -DADMVVITAGPRQK-P----GQSRLE---LVGATV----NILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             -TCSEEEECCCCCCC-T----TCCHHH---HHHHHH----HHHHHHHHHHHHHCTTSEEEECC
T ss_pred             -CCcEEEEecccccC-C----CCchhh---hhhhhH----HHHHHHHHHHHhhCCCeEEEEeC
Confidence             46799999997532 2    234443   556664    45566666665554 46666655

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.22  E-value=0.00049  Score=46.67  Aligned_cols=39  Identities=18%  Similarity=0.307  Sum_probs=33.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      |.++|.|+ |-+|+.+|++|.++|..|++++.+++..++.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~   39 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY   39 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH
Confidence            45677766 7999999999999999999999999887654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.22  E-value=0.0023  Score=44.86  Aligned_cols=116  Identities=19%  Similarity=0.250  Sum_probs=70.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCce-eEEEEEecccCccchhhHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQ-INIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +...+.|.|+ |.+|..+|..++.+|.  ++++.|++++.++....++.+...... .....   +++.          +
T Consensus        18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~---~~d~----------~   83 (159)
T d2ldxa1          18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVF---GKDY----------N   83 (159)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEE---ESSG----------G
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEe---ccch----------h
Confidence            3445677786 9999999999999875  699999999888877777875422111 11111   1110          1


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecc
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGS  205 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS  205 (210)
                      ...  +-|++|..||......     .+.++   .++.|    ..+.+...|.+.+. .++.++++|-
T Consensus        84 ~~~--~adivvitag~~~~~~-----~~R~d---ll~~N----~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          84 VSA--NSKLVIITAGARMVSG-----QTRLD---LLQRN----VAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             GGT--TEEEEEECCSCCCCTT-----TCSSC---TTHHH----HHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             hhc--cccEEEEecccccCCC-----CCHHH---HHHHH----HHHHHHHHHHHhccCCCeEEEEeCC
Confidence            122  4789999999754321     12221   24444    33456666666554 4566666653

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.18  E-value=0.00089  Score=44.13  Aligned_cols=39  Identities=18%  Similarity=0.154  Sum_probs=34.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~   98 (210)
                      ++++||+++|.|| |.+|.+-++.|.+.|++|++++....
T Consensus         8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            4677999999988 56999999999999999999987654

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.13  E-value=0.0068  Score=41.99  Aligned_cols=114  Identities=16%  Similarity=0.222  Sum_probs=66.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC---------eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL---------NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~---------~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      .|.|+||+|.+|..++..|+..+.         +++..+++.++++....++..... ........  ++.         
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~---------   73 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAF-PLLAGLEA--TDD---------   73 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEE--ESC---------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccc-cccccccc--CCc---------
Confidence            689999999999999999998653         223334555666666555554321 11222111  111         


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-C-CCEEEEec
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-K-KGAIVNIG  204 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~-~g~iv~is  204 (210)
                      ..+.+.  +.|++|..||.... +    ..+.++   .++.|+    ...+...+.+.+. + .+.++.+|
T Consensus        74 ~~~~~~--~advViitaG~~~~-p----g~~r~d---l~~~N~----~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          74 PKVAFK--DADYALLVGAAPRK-A----GMERRD---LLQVNG----KIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             HHHHTT--TCSEEEECCCCCCC-T----TCCHHH---HHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             hhhhcc--cccEEEeecCcCCC-C----CCcHHH---HHHHHH----HHHHHHHHHHHHhCCCCcEEEEec
Confidence            223344  57899999997543 2    345554   355554    4556666666653 3 35566655

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.13  E-value=0.011  Score=40.16  Aligned_cols=110  Identities=17%  Similarity=0.274  Sum_probs=68.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           66 ALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +.|.|+ |++|..+|..++.+|  .++++.|+++++++....++....+ ........    ++   .       +... 
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~----~~---~-------~~~~-   66 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA----GD---Y-------ADLK-   66 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE----CC---G-------GGGT-
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccC----Cc---H-------HHhc-
Confidence            456686 899999999998887  4699999999888777666655321 11222211    11   1       1122 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                       +-|++|.+||.... +    ..+..+   .+..|.    .+.+...|.+.+.. ++.++++|
T Consensus        67 -~adivvitag~~~~-~----g~~r~d---l~~~N~----~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          67 -GSDVVIVAAGVPQK-P----GETRLQ---LLGRNA----RVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             -TCSEEEECCCCCCC-S----SCCHHH---HHHHHH----HHHHHHHHHHHHHCTTCEEEECS
T ss_pred             -CCCEEEEecccccC-C----Ccchhh---hhcccc----chHHHHHHHHHhcCCCcEEEEeC
Confidence             46799999997543 2    223333   445553    45666777766644 56666655

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.10  E-value=0.0013  Score=46.17  Aligned_cols=40  Identities=33%  Similarity=0.567  Sum_probs=34.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      |++++|.|+ +++|...++.+...|++|+++++++++++.+
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            788999875 9999998888888999999999999887654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.08  E-value=0.0038  Score=42.73  Aligned_cols=111  Identities=18%  Similarity=0.287  Sum_probs=65.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhCC--CceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           66 ALITGATDGIGKAFAHQLAQHG--LNLILVSRNHNKLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G--~~Vi~~~r~~~~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +.|+|| |.+|..+|..++.+|  .++++.|+++++++....++.....  ........   +++   .+       ...
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~---~~~---~~-------~~~   68 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG---SND---YA-------DTA   68 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE---ESC---GG-------GGT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEe---cCC---HH-------Hhc
Confidence            567786 899999999999988  4799999999877665555533210  11222211   122   11       122


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEec
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIG  204 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~is  204 (210)
                        +-|++|.+||.... +    ..+..   +.++.|..    ..+...+.+.+. .++.++++|
T Consensus        69 --dadvvvitag~~~~-~----g~~r~---~l~~~N~~----i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          69 --NSDIVIITAGLPRK-P----GMTRE---DLLMKNAG----IVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             --TCSEEEECCSCCCC-T----TCCHH---HHHHHHHH----HHHHHHHHHHHHCSSCEEEECC
T ss_pred             --CCeEEEEEEecCCC-C----CCchH---HHHHHHHH----HHHHHHHHhhccCCCeEEEEec
Confidence              47899999997543 2    22333   34455543    455555555544 346666655

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.06  E-value=0.0059  Score=41.92  Aligned_cols=114  Identities=14%  Similarity=0.209  Sum_probs=66.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .+.|.||+|.+|.++|..++.+|.  ++++.|.++.+.+.  .++...  . .......-+. .       ....+... 
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~--~-~~~~~~~~~~-~-------~~~~~~~~-   67 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHI--E-TRATVKGYLG-P-------EQLPDCLK-   67 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTS--S-SSCEEEEEES-G-------GGHHHHHT-
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhh--h-hhcCCCeEEc-C-------CChHHHhC-
Confidence            478999999999999999999885  49999998754332  344322  1 1111111111 1       11223334 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEecc
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIGS  205 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~isS  205 (210)
                       +-|++|..||.... +    ..+..+   .++.|..    ..+...|.+.+.+ ++.++++|.
T Consensus        68 -~aDivVitag~~~~-~----g~sR~~---ll~~N~~----i~~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          68 -GCDVVVIPAGVPRK-P----GMTRDD---LFNTNAT----IVATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             -TCSEEEECCSCCCC-T----TCCGGG---GHHHHHH----HHHHHHHHHHHHCTTSEEEECSS
T ss_pred             -CCCEEEECCCcCCC-C----CCCcch---HHHHHHH----HHHHHHHHHHhcCCCeEEEEecC
Confidence             47899999997432 2    223333   4666654    4455555555544 567777664

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00089  Score=48.55  Aligned_cols=44  Identities=23%  Similarity=0.366  Sum_probs=37.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQ  108 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~  108 (210)
                      |.+.|.|| |-+|..+|..+++.|++|++.|++++.+++..+.++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            56778888 779999999999999999999999988776655543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.99  E-value=0.00074  Score=47.81  Aligned_cols=45  Identities=18%  Similarity=0.318  Sum_probs=38.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l  107 (210)
                      ++|.|+|-|+ ||.+++++..|.+.|+ ++.++.|+.++.+++.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            3677888877 8999999999999997 6999999999888776554

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.97  E-value=0.023  Score=38.69  Aligned_cols=112  Identities=10%  Similarity=0.162  Sum_probs=68.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecC--hhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL--NLILVSRN--HNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~--~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+.|.||++.+|..+|..+..+|.  ++++.|.+  ++.++....++....+ .........|.          +    .
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~----------~----~   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY----------E----D   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG----------G----G
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH----------H----H
Confidence            477999999999999999999885  59999964  4445545555654211 22333222111          1    1


Q ss_pred             hcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          140 IDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                      ..  +-|++|..||.... +    ..+..   +.++.|.    .+.+...|.+.+.. ++.++.+|
T Consensus        68 ~~--~aDiVvitaG~~~~-~----g~~R~---dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          68 TA--GSDVVVITAGIPRQ-P----GQTRI---DLAGDNA----PIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             GT--TCSEEEECCCCCCC-T----TCCHH---HHHHHHH----HHHHHHHHHHHTTCSCCEEEECC
T ss_pred             hh--hcCEEEEecccccc-c----CCchh---hHHHHHH----HHHHHHHHHHHhcCCCceEEEec
Confidence            22  47799999996532 2    22443   3566664    46677777777664 45566554

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.96  E-value=0.00088  Score=47.80  Aligned_cols=49  Identities=31%  Similarity=0.474  Sum_probs=42.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAE  110 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~  110 (210)
                      +++||.|+|-|+ ||.+++++..|.+.| +|.+..|+.++.+++.+++...
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~   63 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK   63 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence            366999999977 789999999998777 9999999999999988888654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.95  E-value=0.00047  Score=43.92  Aligned_cols=38  Identities=13%  Similarity=0.152  Sum_probs=33.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~   98 (210)
                      +++||+++|.|. +..|+++|+.|.++|++|++.|.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            356999999988 67899999999999999999998654

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.92  E-value=0.0028  Score=43.47  Aligned_cols=113  Identities=17%  Similarity=0.286  Sum_probs=65.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCC--CceeEEEEEecccCccchhhHHHHHHHh
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +.+.|.|+ |.+|.++|..++.++. ++++.|.+++..+....++.....  ........   +++      .+    ..
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~---~~d------~~----~~   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG---TNN------YA----DT   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE---ESC------GG----GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEe---cCc------HH----Hh
Confidence            34666686 9999999999998874 799999998877766666643210  11111111   111      01    12


Q ss_pred             cCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          141 DGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       141 ~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                      .  +-|++|.+||.... +    ..+.+   +.++.|.    .+.+...+.+.+.. ++.++++|
T Consensus        68 ~--~advvvitag~~~~-~----~~~r~---dl~~~N~----~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          68 A--NSDVIVVTSGAPRK-P----GMSRE---DLIKVNA----DITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             T--TCSEEEECCSCC-----------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred             c--CCCEEEEeeeccCC-c----Ccchh---HHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence            2  46799999997543 1    11222   3445553    46777788777654 56666654

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.91  E-value=0.015  Score=39.62  Aligned_cols=111  Identities=13%  Similarity=0.164  Sum_probs=67.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhC--CCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAEN--PNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +.|.|+ |.+|.++|..++.+|.  ++++.|++++..+....++.+..  .........   +.+      .+    ...
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~---~~d------~~----~~~   68 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG---GAD------YS----LLK   68 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE---ESC------GG----GGT
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCcccc---CCC------HH----Hhc
Confidence            556686 9999999999998884  59999999988877666675431  112222221   111      01    222


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                        +-|++|..||.... +    ..+..   +.+..|.    ...+...+.+.+.. ++.++++|
T Consensus        69 --~adiVvitag~~~~-~----g~~r~---~l~~~n~----~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          69 --GSEIIVVTAGLARK-P----GMTRL---DLAHKNA----GIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             --TCSEEEECCCCCCC-S----SCCHH---HHHHHHH----HHHHHHHHHHHTTSTTCEEEECS
T ss_pred             --cccEEEEeccccCC-C----CCchH---HHHHHhh----HHHHHHHHHHHhhCCCcEEEEec
Confidence              46789999996533 2    22333   2444443    45566666666654 45666655

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.87  E-value=0.0053  Score=42.47  Aligned_cols=117  Identities=15%  Similarity=0.171  Sum_probs=68.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhC--CCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAEN--PNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+.|.|+ +++|..+|..+..++. ++++.|+++++.+....++.+..  ...+......   ++   .       +...
T Consensus         5 KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~---~~---~-------~~~~   70 (150)
T d1t2da1           5 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS---NT---Y-------DDLA   70 (150)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE---CC---G-------GGGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEec---cc---c-------cccC
Confidence            4667785 9999999998888774 69999999988777776665421  1222222221   11   0       1122


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhCC-CCEEEEec
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRRK-KGAIVNIG  204 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~~-~g~iv~is  204 (210)
                        +-|++|.+||........-.+.+.+   ..++.|.    .+.+.+.+.+.+.. ++.++++|
T Consensus        71 --~advvvitag~~~~~g~~~~~~~R~---~l~~~N~----~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          71 --GADVVIVTAGFTKAPGKSDKEWNRD---DLLPLNN----KIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             --TCSEEEECCSCSSCTTCCSTTCCGG---GGHHHHH----HHHHHHHHHHHHHCTTSEEEECS
T ss_pred             --CCcEEEEecccccCCCCCccccchh---HHHHHHH----HHHHHHHHHHHhcCCCeEEEEec
Confidence              4779999999754321111112222   2455554    45566666665544 45666665

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.86  E-value=0.0088  Score=40.90  Aligned_cols=110  Identities=20%  Similarity=0.316  Sum_probs=63.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhCCCc-eeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISNEIQAENPNT-QINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~~l~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +.|.|+ |.+|..+|..++.+|.  ++++.|+++++++....++.+..+.. ....    .+.+          .+... 
T Consensus         4 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~----~~~~----------~~~~~-   67 (142)
T d1y6ja1           4 VAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSL----YAGD----------YSDVK-   67 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEE----C--C----------GGGGT-
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeE----eeCc----------HHHhC-
Confidence            455586 9999999999999875  69999999987766666676532211 1111    1111          11233 


Q ss_pred             CCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEec
Q 045749          143 LEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIG  204 (210)
Q Consensus       143 ~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~is  204 (210)
                       +-|++|..||.... +    ..+..   +.++.|.    .+.+...+.+.+. .++.++++|
T Consensus        68 -~adivvitag~~~~-~----~~~r~---~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          68 -DCDVIVVTAGANRK-P----GETRL---DLAKKNV----MIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             -TCSEEEECCCC-----------CHH---HHHHHHH----HHHHHHHHHHHHHCCSCEEEECS
T ss_pred             -CCceEEEecccccC-c----Ccchh---HHhhHHH----HHHHHHHHHhhccCCCceEEEec
Confidence             46799999996532 1    12332   3455554    4566666666654 456666665

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.78  E-value=0.02  Score=39.54  Aligned_cols=114  Identities=17%  Similarity=0.225  Sum_probs=63.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCh--hHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGL-------NLILVSRNH--NKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA  135 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~-------~Vi~~~r~~--~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  135 (210)
                      .|.|+||+|.+|.+++..|+..+.       .+++.+.++  ++++....++...... ....  ...+++         
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~-~~~~--~~~~~~---------   72 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP-LLKD--VIATDK---------   72 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT-TEEE--EEEESC---------
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccc-cccc--cccCcc---------
Confidence            589999999999999999987653       356666544  3444444444432111 1111  112222         


Q ss_pred             HHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-C-CCEEEEec
Q 045749          136 IEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-K-KGAIVNIG  204 (210)
Q Consensus       136 ~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~-~g~iv~is  204 (210)
                      ..+...  +.|++|..||.....     ..+.++   .++.|.    ...+...+.+.+. + .+.++.+|
T Consensus        73 ~~~~~~--~~dvVVitag~~~~~-----g~sr~d---ll~~N~----~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          73 EEIAFK--DLDVAILVGSMPRRD-----GMERKD---LLKANV----KIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             HHHHTT--TCSEEEECCSCCCCT-----TCCTTT---THHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cccccC--CceEEEEecccCCCC-----CCchhH---HHHHhH----HHHHHHHHHHHhhCCCceEEEEec
Confidence            222333  478999999976442     223332   344443    4556666666553 3 34455554

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.72  E-value=0.00041  Score=50.83  Aligned_cols=44  Identities=18%  Similarity=0.342  Sum_probs=38.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      ++.||++.|-| .|.+|..+|+.|.+.|++|++.+.+.+.+++..
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~   67 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV   67 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH
Confidence            57799999987 578999999999999999999999988776543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.71  E-value=0.0021  Score=45.47  Aligned_cols=41  Identities=22%  Similarity=0.323  Sum_probs=35.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISN  105 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~  105 (210)
                      |++-|.|| |.+|.++|..|+++|++|.+.+|++++.++..+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            67778887 899999999999999999999999888776543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.70  E-value=0.04  Score=37.61  Aligned_cols=114  Identities=20%  Similarity=0.284  Sum_probs=66.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc-C--CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           65 WALITGATDGIGKAFAHQLAQH-G--LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~-G--~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .+.|+|+++.+|.++|..++.+ +  .++++.|..+ ..+....++.+.........    +...    ...+.    ..
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~----~~~~----~~~~~----~~   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKG----FSGE----DATPA----LE   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEE----ECSS----CCHHH----HT
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcE----EEcC----CCccc----cC
Confidence            4679999999999999988643 3  5799999864 45555556655321111111    1111    11122    22


Q ss_pred             CCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhhhHHHHHHHHHHHHhHhC-CCCEEEEecc
Q 045749          142 GLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNLEGTTRVTKAVLTGMMRR-KKGAIVNIGS  205 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l~~m~~~-~~g~iv~isS  205 (210)
                        +-|++|..||.... +    ..+..+   .++.|.    ...+...+.+.+. .++.++++|.
T Consensus        69 --~aDvvvitaG~~~k-~----g~~R~d---l~~~N~----~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          69 --GADVVLISAGVRRK-P----GMDRSD---LFNVNA----GIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             --TCSEEEECCSCCCC-T----TCCGGG---GHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             --CCCEEEECCCccCC-C----Ccchhh---HHHHHH----HHHHHHHHHHHhhCCCcEEEEccC
Confidence              46899999997533 2    223333   466664    3445555555544 3566776664

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.66  E-value=0.0016  Score=46.80  Aligned_cols=44  Identities=25%  Similarity=0.271  Sum_probs=36.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQ  108 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~  108 (210)
                      |++.|.|| |=+|..+|..++..|++|++.|++++.+++..+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            35677777 779999999999999999999999988776655543

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.52  E-value=0.002  Score=44.55  Aligned_cols=39  Identities=21%  Similarity=0.277  Sum_probs=34.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHH
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKL  100 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l  100 (210)
                      .-|++.|.||.+-+|..+|+.|.++|++|.+.+|+....
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~   46 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV   46 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence            346789999999999999999999999999999986543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.46  E-value=0.011  Score=40.64  Aligned_cols=57  Identities=16%  Similarity=0.119  Sum_probs=43.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      .++|.|. +-+|+.++++|.++|.+|++++.++++..+..++...    ..+.++..|.+++
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~----~~~~vi~Gd~~d~   61 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----DNADVIPGDSNDS   61 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----TTCEEEESCTTSH
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc----CCcEEEEccCcch
Confidence            4677776 7999999999999999999999998776555555432    3456667776655

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.26  E-value=0.0056  Score=45.71  Aligned_cols=60  Identities=32%  Similarity=0.434  Sum_probs=47.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEE
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      ++++++|+|.|+ ||+|-.+++.|++.|. +++++|.+                   ..+.+.+++.+++..|..++..+
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~  105 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  105 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence            456889999985 8999999999999997 58888864                   34667777888888777776655


Q ss_pred             E
Q 045749          120 E  120 (210)
Q Consensus       120 ~  120 (210)
                      .
T Consensus       106 ~  106 (247)
T d1jw9b_         106 N  106 (247)
T ss_dssp             C
T ss_pred             h
Confidence            4

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.19  E-value=0.0024  Score=44.08  Aligned_cols=37  Identities=24%  Similarity=0.289  Sum_probs=32.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      ++++||+++|.|| |.+|..-++.|.+.|++|++++..
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4567999999999 569999999999999999999754

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.13  E-value=0.032  Score=39.66  Aligned_cols=39  Identities=18%  Similarity=0.302  Sum_probs=33.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK   99 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~   99 (210)
                      .+.||++.|.|. +.||+++|+.+..-|++|+..++...+
T Consensus        41 ~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          41 EIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            467999999874 899999999999999999999986543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.11  E-value=0.0056  Score=43.01  Aligned_cols=45  Identities=22%  Similarity=0.437  Sum_probs=39.0

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      ..++.||.++|.|.|.=.|+.++..|.++|++|+++......+++
T Consensus        32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~   76 (166)
T d1b0aa1          32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRH   76 (166)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHH
T ss_pred             CcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHH
Confidence            345679999999999999999999999999999998877665543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.07  E-value=0.019  Score=40.45  Aligned_cols=41  Identities=15%  Similarity=0.289  Sum_probs=34.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISN  105 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~  105 (210)
                      +.+-+.|- +-+|.++|+.|+++|++|++.+|++++.+++.+
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~   43 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA   43 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence            34556655 899999999999999999999999998877654

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0063  Score=49.38  Aligned_cols=62  Identities=19%  Similarity=0.274  Sum_probs=48.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEEEE
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIVEY  121 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~~~  121 (210)
                      ++..|+|.|+ ||+|-++++.|+..|. ++.++|.+                   ..+.+.+++.+++.+|..++.....
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~  114 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  114 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECS
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeec
Confidence            4567899988 7899999999999998 69998875                   2356667778888888777776665


Q ss_pred             ecc
Q 045749          122 DFS  124 (210)
Q Consensus       122 D~~  124 (210)
                      ++.
T Consensus       115 ~i~  117 (426)
T d1yovb1         115 KIQ  117 (426)
T ss_dssp             CGG
T ss_pred             ccc
Confidence            544

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.96  E-value=0.0089  Score=42.21  Aligned_cols=39  Identities=23%  Similarity=0.404  Sum_probs=35.3

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      ..++.||.++|.|.|.=.|+.+|..|+++|++|..+..+
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            446789999999999999999999999999999988765

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.95  E-value=0.0054  Score=43.35  Aligned_cols=44  Identities=14%  Similarity=0.238  Sum_probs=39.1

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE  101 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~  101 (210)
                      ..++.||.++|.|.|.=.|+.++..|+++|++|.++......+.
T Consensus        34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            44677999999999999999999999999999999988766554

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.75  E-value=0.012  Score=40.82  Aligned_cols=39  Identities=33%  Similarity=0.379  Sum_probs=32.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHH
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISN  105 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~  105 (210)
                      +.|.|+ |-+|.++|+.|.++|++|+..||+++.+++..+
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~   41 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE   41 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH
Confidence            445555 999999999999999999999999887776543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.70  E-value=0.051  Score=39.04  Aligned_cols=38  Identities=18%  Similarity=0.259  Sum_probs=33.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~   98 (210)
                      ++.||++.|.|- |.||+.+|+.+..-|++|+..++...
T Consensus        40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            467999999976 89999999999999999999987643

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.61  E-value=0.062  Score=37.51  Aligned_cols=78  Identities=18%  Similarity=0.269  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ....++|.|| +=-|++-++...+.|++|.+.|.+.++++++.+....     .+...   .    +.+   +.+.+.+.
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~-----~~~~~---~----~~~---~~l~~~~~   94 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVELL---Y----SNS---AEIETAVA   94 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEEE---E----CCH---HHHHHHHH
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc-----cceee---h----hhh---hhHHHhhc
Confidence            3467788876 5679999999999999999999999998877655432     12111   1    112   34455555


Q ss_pred             CCCccEEEEcCCCCCC
Q 045749          142 GLEVGVLINNVGITYP  157 (210)
Q Consensus       142 ~~~id~lvnnAg~~~~  157 (210)
                        +-|++|.+|-+...
T Consensus        95 --~aDivI~aalipG~  108 (168)
T d1pjca1          95 --EADLLIGAVLVPGR  108 (168)
T ss_dssp             --TCSEEEECCCCTTS
T ss_pred             --cCcEEEEeeecCCc
Confidence              47899999876544

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.59  E-value=0.12  Score=36.85  Aligned_cols=74  Identities=12%  Similarity=0.094  Sum_probs=51.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +..||=.|+++|.   ++..+++.|++|+.+|.+++.++.+.+.....  +.....+..|..+..            +..
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~--~~~~~~~~~d~~~l~------------~~~  100 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR--ESNVEFIVGDARKLS------------FED  100 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEECCTTSCC------------SCT
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc--ccccccccccccccc------------ccC
Confidence            4568889998886   66788899999999999998888877766655  334455555544321            111


Q ss_pred             CCccEEEEcCC
Q 045749          143 LEVGVLINNVG  153 (210)
Q Consensus       143 ~~id~lvnnAg  153 (210)
                      ...|+++.+..
T Consensus       101 ~~fD~I~~~~~  111 (226)
T d1ve3a1         101 KTFDYVIFIDS  111 (226)
T ss_dssp             TCEEEEEEESC
T ss_pred             cCceEEEEecc
Confidence            25888887654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.59  E-value=0.02  Score=39.94  Aligned_cols=43  Identities=21%  Similarity=0.339  Sum_probs=37.3

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKL  100 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l  100 (210)
                      .+..+.||+++|.|- +-+|+.+|+.+...|++|+++++++.+.
T Consensus        18 t~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~a   60 (163)
T d1li4a1          18 TDVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINA   60 (163)
T ss_dssp             HCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             hCceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchh
Confidence            355678999999976 5899999999999999999999998553

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.56  E-value=0.0098  Score=41.93  Aligned_cols=36  Identities=19%  Similarity=0.358  Sum_probs=32.6

Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHH
Q 045749           71 ATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNE  106 (210)
Q Consensus        71 assGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~  106 (210)
                      |.+-+|.++|+.|+++|++|.+.+|++++.+++.++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            668899999999999999999999999998877655

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.46  E-value=0.051  Score=37.99  Aligned_cols=118  Identities=12%  Similarity=0.111  Sum_probs=60.3

Q ss_pred             EEEEEcCCCh-HHHHHHHHHHHc----CCeEEEEecChhHHHHHHHHHHhhCC--CceeEEEEEecccCccchhhHHHHH
Q 045749           65 WALITGATDG-IGKAFAHQLAQH----GLNLILVSRNHNKLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGNIKAIE  137 (210)
Q Consensus        65 ~vlITGassG-iG~~~a~~l~~~----G~~Vi~~~r~~~~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~  137 (210)
                      .+.|.||+|. ....+...+.+.    +.++++.|.++++++...+.+.....  +......   .+.+         .+
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d---------~~   72 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFA---ATTD---------PE   72 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEE---EESC---------HH
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceE---ecCC---------hh
Confidence            3555566543 223333333322    24799999999998765555433210  1111111   1111         22


Q ss_pred             HHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhh----------------hHHHHHHHHHHHHhHhCC-CCEE
Q 045749          138 MAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL----------------EGTTRVTKAVLTGMMRRK-KGAI  200 (210)
Q Consensus       138 ~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~----------------~g~~~l~~~~l~~m~~~~-~g~i  200 (210)
                      +.+.  +-|++|+.||....        +..+-++.+..|+                +-.+...+.+.+.+.+.. .+-+
T Consensus        73 eal~--~AD~Vvitag~~~~--------~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~l  142 (167)
T d1u8xx1          73 EAFT--DVDFVMAHIRVGKY--------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWM  142 (167)
T ss_dssp             HHHS--SCSEEEECCCTTHH--------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             hccC--CCCEEEECCCcCCC--------CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEE
Confidence            3344  47899999997432        1222333444442                223455666677666654 4666


Q ss_pred             EEec
Q 045749          201 VNIG  204 (210)
Q Consensus       201 v~is  204 (210)
                      +++|
T Consensus       143 i~~T  146 (167)
T d1u8xx1         143 LNYS  146 (167)
T ss_dssp             EECC
T ss_pred             EEeC
Confidence            6665

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.46  E-value=0.096  Score=38.48  Aligned_cols=47  Identities=19%  Similarity=0.277  Sum_probs=40.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      ++.||+++|-|- +..|..+|+.|.+.|++|++++.+...++...++.
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            466999999865 78999999999999999999999988887766543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.43  E-value=0.1  Score=37.26  Aligned_cols=38  Identities=21%  Similarity=0.278  Sum_probs=33.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      ..+.||++.|.|. |.||+++|+.+..-|++|+..++..
T Consensus        45 ~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          45 ARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             eeeeCceEEEecc-ccccccceeeeeccccceeeccCcc
Confidence            3467999999966 8999999999999999999999864

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.40  E-value=0.072  Score=34.51  Aligned_cols=34  Identities=15%  Similarity=0.241  Sum_probs=29.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .|.++|.|| |-+|.++|..|++.|.+|+++.|.+
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            467788776 7999999999999999999998864

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.054  Score=41.46  Aligned_cols=75  Identities=16%  Similarity=0.147  Sum_probs=50.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+||+||-.|+++|+   ++..+++.|+ +|+.++.++.. ....+.........++.++..|+.+...           
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~-----------   98 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL-----------   98 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC-----------
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC-----------
Confidence            358999999999886   5667788897 59999988753 3444444444445667777766554311           


Q ss_pred             hcCCCccEEEEc
Q 045749          140 IDGLEVGVLINN  151 (210)
Q Consensus       140 ~~~~~id~lvnn  151 (210)
                       +..++|+++.+
T Consensus        99 -~~~~~D~Ivse  109 (311)
T d2fyta1          99 -PVEKVDVIISE  109 (311)
T ss_dssp             -SCSCEEEEEEC
T ss_pred             -ccccceEEEEe
Confidence             11268888865

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.32  E-value=0.0092  Score=41.22  Aligned_cols=34  Identities=15%  Similarity=0.204  Sum_probs=30.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK   99 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~   99 (210)
                      ++.|.|+ +.+|..++..|++.|++|.+++|++++
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            3677888 999999999999999999999998654

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=95.18  E-value=0.038  Score=39.59  Aligned_cols=82  Identities=10%  Similarity=0.152  Sum_probs=60.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      .++=+|-|+||..+++.+.+ . +.+|+.+|++++.++...+.++..  +.++.++..++++.       ..+.+..+..
T Consensus        26 ~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~--~~r~~~~~~~f~~~-------~~~~~~~~~~   94 (192)
T d1m6ya2          26 IILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF--SDRVSLFKVSYREA-------DFLLKTLGIE   94 (192)
T ss_dssp             EEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG--TTTEEEEECCGGGH-------HHHHHHTTCS
T ss_pred             EEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc--cccccchhHHHhhH-------HHHHHHcCCC
Confidence            33446888999999998877 3 569999999999988887776554  45677777666532       4455555444


Q ss_pred             CccEEEEcCCCCC
Q 045749          144 EVGVLINNVGITY  156 (210)
Q Consensus       144 ~id~lvnnAg~~~  156 (210)
                      .+|.++...|++.
T Consensus        95 ~vdgIl~DlGvSs  107 (192)
T d1m6ya2          95 KVDGILMDLGVST  107 (192)
T ss_dssp             CEEEEEEECSCCH
T ss_pred             CcceeeeccchhH
Confidence            7999999999854

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.12  E-value=0.24  Score=35.27  Aligned_cols=76  Identities=16%  Similarity=0.153  Sum_probs=51.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++.|+.|+=-|+++|.   ++..++.+|+ +|+.++.+++.++.+.+.++..  +.+..++..|....            
T Consensus        44 dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~--~~~~~~~~~d~~~~------------  106 (201)
T d1wy7a1          44 DIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEF--KGKFKVFIGDVSEF------------  106 (201)
T ss_dssp             SSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG--TTSEEEEESCGGGC------------
T ss_pred             CCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc--CCCceEEECchhhh------------
Confidence            3459999988887662   2334456786 7999999998888777666554  44555655554221            


Q ss_pred             HhcCCCccEEEEcCCCC
Q 045749          139 AIDGLEVGVLINNVGIT  155 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~  155 (210)
                        . .++|++|.|.-..
T Consensus       107 --~-~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 --N-SRVDIVIMNPPFG  120 (201)
T ss_dssp             --C-CCCSEEEECCCCS
T ss_pred             --C-CcCcEEEEcCccc
Confidence              2 2689999987543

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.06  E-value=0.21  Score=36.29  Aligned_cols=72  Identities=14%  Similarity=0.121  Sum_probs=53.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      ++.+|=.|++.|   ..+..|+++|++|+.+|.+++-++.+.+.....  +.++.+...|+.+-.            .++
T Consensus        42 ~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~--~~~i~~~~~d~~~l~------------~~~  104 (251)
T d1wzna1          42 VRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER--NLKIEFLQGDVLEIA------------FKN  104 (251)
T ss_dssp             CCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEESCGGGCC------------CCS
T ss_pred             CCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc--cccchheehhhhhcc------------ccc
Confidence            568999999887   456678899999999999998888777777665  446777777765431            122


Q ss_pred             CCccEEEEcC
Q 045749          143 LEVGVLINNV  152 (210)
Q Consensus       143 ~~id~lvnnA  152 (210)
                       ..|.++..-
T Consensus       105 -~fD~I~~~~  113 (251)
T d1wzna1         105 -EFDAVTMFF  113 (251)
T ss_dssp             -CEEEEEECS
T ss_pred             -ccchHhhhh
Confidence             588877643

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.05  E-value=0.065  Score=39.29  Aligned_cols=74  Identities=14%  Similarity=0.065  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .++.+|=.|++.|.   ++..|+++|.+|+.+|.+++-++.+.+.....  +.++.++..|+.+..            ..
T Consensus        37 ~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~--~~~v~~~~~d~~~~~------------~~   99 (246)
T d1y8ca_          37 VFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ--GLKPRLACQDISNLN------------IN   99 (246)
T ss_dssp             CTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT--TCCCEEECCCGGGCC------------CS
T ss_pred             CCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc--Cccceeeccchhhhc------------cc
Confidence            36789999998885   78889999999999999999888877766654  445677777765431            11


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      + ++|+++...+
T Consensus       100 ~-~fD~i~~~~~  110 (246)
T d1y8ca_         100 R-KFDLITCCLD  110 (246)
T ss_dssp             C-CEEEEEECTT
T ss_pred             c-cccccceeee
Confidence            2 6888886543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.94  E-value=0.14  Score=39.38  Aligned_cols=81  Identities=10%  Similarity=0.142  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCC-ChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           62 YGSWALITGAT-DGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        62 ~gk~vlITGas-sGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .|+.||=.|+. ++++.+    +++.|+ +|+.++.+++.++.+.+.++..+-..++.++..|+.      +....+...
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence            37888877764 555554    345676 699999999998888877776543445666655432      112233222


Q ss_pred             hcCCCccEEEEcCCC
Q 045749          140 IDGLEVGVLINNVGI  154 (210)
Q Consensus       140 ~~~~~id~lvnnAg~  154 (210)
                        +.++|++|.+.-.
T Consensus       215 --~~~fD~Vi~DpP~  227 (324)
T d2as0a2         215 --GEKFDIVVLDPPA  227 (324)
T ss_dssp             --TCCEEEEEECCCC
T ss_pred             --cCCCCchhcCCcc
Confidence              2279999988754

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.92  E-value=0.069  Score=37.90  Aligned_cols=37  Identities=22%  Similarity=0.191  Sum_probs=32.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .+.|+++.|.|. |.||+++++.+..-|++|...++..
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          41 DLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             eccccceeeccc-cccchhhhhhhhccCceEEEEeecc
Confidence            466999999875 7899999999999999999999853

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.91  E-value=0.018  Score=39.85  Aligned_cols=35  Identities=20%  Similarity=0.411  Sum_probs=30.9

Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHH
Q 045749           71 ATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISN  105 (210)
Q Consensus        71 assGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~  105 (210)
                      |.+-+|.++|+.|+++|++|++.+|++++.++..+
T Consensus         7 GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~   41 (161)
T d1vpda2           7 GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   41 (161)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence            45889999999999999999999999988777654

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.89  E-value=0.1  Score=40.15  Aligned_cols=81  Identities=15%  Similarity=0.127  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +|+.|+=.++..| |.++  .+++.|++|+.+|.++..++.+.+.++..+ -.++.++..|..+.      .+.+.+.- 
T Consensus       145 ~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~~i~~d~~~~------~~~~~~~~-  213 (318)
T d1wxxa2         145 RGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNG-LGNVRVLEANAFDL------LRRLEKEG-  213 (318)
T ss_dssp             CEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEESCHHHH------HHHHHHTT-
T ss_pred             CCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcC-CCCcceeeccHHHH------hhhhHhhh-
Confidence            5888887776544 3333  345567899999999999988887776653 23466665554321      22333222 


Q ss_pred             CCCccEEEEcCCC
Q 045749          142 GLEVGVLINNVGI  154 (210)
Q Consensus       142 ~~~id~lvnnAg~  154 (210)
                       .+.|.++.+.-.
T Consensus       214 -~~fD~Vi~DpP~  225 (318)
T d1wxxa2         214 -ERFDLVVLDPPA  225 (318)
T ss_dssp             -CCEEEEEECCCC
T ss_pred             -cCCCEEEEcCCc
Confidence             279999998754

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.87  E-value=0.12  Score=33.67  Aligned_cols=35  Identities=17%  Similarity=0.158  Sum_probs=29.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      ..+.++|.|| |-||.++|..|++.|.+|.++.+++
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            3567888876 7999999999999999999998763

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.82  E-value=0.036  Score=37.88  Aligned_cols=40  Identities=23%  Similarity=0.434  Sum_probs=33.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHH
Q 045749           66 ALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNE  106 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~  106 (210)
                      +.+.|+ |-+|.++++.|.+.| .+|.+++|++++++++.++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            445555 899999999998887 8899999999888776655

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.81  E-value=0.098  Score=34.24  Aligned_cols=34  Identities=18%  Similarity=0.182  Sum_probs=29.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .|.++|.|| +-||.++|..|++.|++|.++.+++
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            467777776 7899999999999999999998864

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.78  E-value=0.14  Score=35.59  Aligned_cols=34  Identities=15%  Similarity=0.046  Sum_probs=23.6

Q ss_pred             EEEEcC-CChHHHHHHHHHHHcC----CeEEEEecChhH
Q 045749           66 ALITGA-TDGIGKAFAHQLAQHG----LNLILVSRNHNK   99 (210)
Q Consensus        66 vlITGa-ssGiG~~~a~~l~~~G----~~Vi~~~r~~~~   99 (210)
                      +.|.|| |.|.+..++..+....    .++++.|.++++
T Consensus         4 I~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~   42 (169)
T d1s6ya1           4 IATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK   42 (169)
T ss_dssp             EEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred             EEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence            445564 6678888777766532    479999998754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.76  E-value=0.11  Score=33.99  Aligned_cols=34  Identities=26%  Similarity=0.276  Sum_probs=29.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .|.++|.|| +-||.++|..|++.|.+|+++.|++
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            367888877 5799999999999999999999963

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.74  E-value=0.031  Score=36.85  Aligned_cols=34  Identities=18%  Similarity=0.227  Sum_probs=29.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      +|.++|.|| +-+|.++|..|++.|.+|+++.+.+
T Consensus        30 ~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          30 VNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            667777765 7999999999999999999998864

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=94.69  E-value=0.12  Score=38.53  Aligned_cols=72  Identities=18%  Similarity=0.165  Sum_probs=50.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      .|+.|+=.|+++|+   ++..+++.|++|+.+|.+++.++.+.+..+..  +.+..+...|..          .   ...
T Consensus       120 ~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n--~~~~~~~~~d~~----------~---~~~  181 (254)
T d2nxca1         120 PGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN--GVRPRFLEGSLE----------A---ALP  181 (254)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT--TCCCEEEESCHH----------H---HGG
T ss_pred             ccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc--CCceeEEecccc----------c---ccc
Confidence            48899999999986   33456788999999999999998887776654  334444443321          1   122


Q ss_pred             CCCccEEEEc
Q 045749          142 GLEVGVLINN  151 (210)
Q Consensus       142 ~~~id~lvnn  151 (210)
                      ..+.|.++.|
T Consensus       182 ~~~fD~V~an  191 (254)
T d2nxca1         182 FGPFDLLVAN  191 (254)
T ss_dssp             GCCEEEEEEE
T ss_pred             ccccchhhhc
Confidence            2368888877

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.67  E-value=0.054  Score=37.80  Aligned_cols=43  Identities=14%  Similarity=0.146  Sum_probs=37.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQ  108 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~  108 (210)
                      |+.||..|++.|   ..+..|+++|++|+.+|.+++.++.+.+..+
T Consensus        21 ~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~   63 (201)
T d1pjza_          21 GARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERG   63 (201)
T ss_dssp             TCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHC
T ss_pred             CCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhc
Confidence            789999999888   4777999999999999999998888776664

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.65  E-value=0.044  Score=37.95  Aligned_cols=41  Identities=24%  Similarity=0.365  Sum_probs=33.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecChhHHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGL--NLILVSRNHNKLEKISN  105 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~~~l~~~~~  105 (210)
                      |.+.|.|. |-+|.++|+.|.+.|.  +|+..|++++.++...+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~   44 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD   44 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH
Confidence            35777875 8999999999999996  68889999887766544

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.64  E-value=0.037  Score=42.32  Aligned_cols=24  Identities=17%  Similarity=0.293  Sum_probs=20.9

Q ss_pred             ChHHHHHHHHHHHcCCeEEEEecC
Q 045749           73 DGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        73 sGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      |..|.++|+.+.++|+.|+++.+.
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecC
Confidence            367999999999999999998654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.62  E-value=0.024  Score=40.46  Aligned_cols=39  Identities=18%  Similarity=0.291  Sum_probs=32.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      .+.|.|| |-.|.++|..|++.|.+|.+++|+++..++..
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            4667766 56899999999999999999999988766543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.61  E-value=0.45  Score=33.39  Aligned_cols=102  Identities=12%  Similarity=0.081  Sum_probs=60.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHH-------HHHHHHHHhhCCCceeEEEEEecccCccchhh
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKL-------EKISNEIQAENPNTQINIVEYDFSCDVVSAGN  132 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l-------~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~  132 (210)
                      ++.++++.|.| -+.||+++|+.+..-|++|+..++.....       +.+ +++-+   ...+..+.+.++.+..  ..
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l-~ell~---~sDii~i~~plt~~T~--~l  113 (188)
T d1sc6a1          41 EARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHL-SDLLN---MSDVVSLHVPENPSTK--NM  113 (188)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCH-HHHHH---HCSEEEECCCSSTTTT--TC
T ss_pred             cccceEEEEee-cccchhhhhhhcccccceEeeccccccchhhhhhhhhhH-HHHHh---hccceeecccCCcchh--hh
Confidence            46799999985 48999999999999999999999863210       111 22222   2456666666654421  11


Q ss_pred             H-HHHHHHhcCCCccEEEEcCCCCCCCcccccCCCHHHHHHHhHhhh
Q 045749          133 I-KAIEMAIDGLEVGVLINNVGITYPKAMFFHEVDEKEWMDIVRVNL  178 (210)
Q Consensus       133 ~-~~~~~~~~~~~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~  178 (210)
                      + ++..+..+...  ++||.|- +   .    -.+++++.+.++-|-
T Consensus       114 i~~~~l~~mk~~a--~lIN~aR-G---~----lvde~aL~~aL~~~~  150 (188)
T d1sc6a1         114 MGAKEISLMKPGS--LLINASR-G---T----VVDIPALADALASKH  150 (188)
T ss_dssp             BCHHHHHHSCTTE--EEEECSC-S---S----SBCHHHHHHHHHTTS
T ss_pred             ccHHHHhhCCCCC--EEEEcCc-H---H----hhhhHHHHHHHHcCC
Confidence            1 34444454322  5555542 1   1    236677666665443

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=94.61  E-value=0.27  Score=34.11  Aligned_cols=121  Identities=11%  Similarity=0.117  Sum_probs=63.4

Q ss_pred             EEEEcCC-ChHHHHHHHHHHHc----CCeEEEEecChhHHHHHHHHHHhhCC--CceeEEEEEecccCccchhhHHHHHH
Q 045749           66 ALITGAT-DGIGKAFAHQLAQH----GLNLILVSRNHNKLEKISNEIQAENP--NTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        66 vlITGas-sGiG~~~a~~l~~~----G~~Vi~~~r~~~~l~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      +.|.||+ -|...++...+++.    +.++++.|+++++++.....+++..+  .....+.   .+.+         ..+
T Consensus         5 I~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~---~~td---------~~e   72 (171)
T d1obba1           5 IGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFE---KTMN---------LDD   72 (171)
T ss_dssp             EEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEE---EESC---------HHH
T ss_pred             EEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEE---EeCC---------hhh
Confidence            4555653 34555555556543    45899999999988765555543210  1222221   1122         223


Q ss_pred             HhcCCCccEEEEcCCCCCCCcccccCCCH-HHHHHHh---------Hhh---------hhHHHHHHHHHHHHhHhCC-CC
Q 045749          139 AIDGLEVGVLINNVGITYPKAMFFHEVDE-KEWMDIV---------RVN---------LEGTTRVTKAVLTGMMRRK-KG  198 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~~~~~~~~~~~~~~-~~~~~~~---------~vN---------~~g~~~l~~~~l~~m~~~~-~g  198 (210)
                      .+.  +.|++|+.++......     .+. +......         +.+         ..-.+...+.+.+.+.+.. .+
T Consensus        73 aL~--dad~Vv~~~~~g~~~~-----~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a  145 (171)
T d1obba1          73 VII--DADFVINTAMVGGHTY-----LEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKA  145 (171)
T ss_dssp             HHT--TCSEEEECCCTTHHHH-----HHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTC
T ss_pred             ccc--CCCeEeeecccccccc-----eeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCe
Confidence            344  4789999998753211     111 1111110         011         2236667788888877654 56


Q ss_pred             EEEEecc
Q 045749          199 AIVNIGS  205 (210)
Q Consensus       199 ~iv~isS  205 (210)
                      .++++|-
T Consensus       146 ~~i~~TN  152 (171)
T d1obba1         146 WYLQAAN  152 (171)
T ss_dssp             EEEECSS
T ss_pred             EEEEECC
Confidence            6777653

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.54  E-value=0.1  Score=35.46  Aligned_cols=35  Identities=29%  Similarity=0.361  Sum_probs=28.9

Q ss_pred             CcEEEEE-cCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           63 GSWALIT-GATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlIT-GassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      ++.++|. .+++-||.++|..|+++|++|.++.+.+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            4555554 4668899999999999999999998864

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.51  E-value=0.22  Score=35.85  Aligned_cols=79  Identities=16%  Similarity=0.109  Sum_probs=53.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      |.+|+-.|+++|--.+..-+....+.+|+.++.+++.++...+.++... -.++.....|..+..            ...
T Consensus        76 g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~-~~n~~~~~~d~~~~~------------~~~  142 (213)
T d1dl5a1          76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-IENVIFVCGDGYYGV------------PEF  142 (213)
T ss_dssp             TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGCC------------GGG
T ss_pred             cceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc-ccccccccCchHHcc------------ccc
Confidence            7789999988877666555555556699999999998888887776542 345555554443221            011


Q ss_pred             CCccEEEEcCCC
Q 045749          143 LEVGVLINNVGI  154 (210)
Q Consensus       143 ~~id~lvnnAg~  154 (210)
                      .++|.++.+++.
T Consensus       143 ~~fD~I~~~~~~  154 (213)
T d1dl5a1         143 SPYDVIFVTVGV  154 (213)
T ss_dssp             CCEEEEEECSBB
T ss_pred             cchhhhhhhccH
Confidence            158998888764

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.50  E-value=0.1  Score=33.98  Aligned_cols=34  Identities=15%  Similarity=0.241  Sum_probs=29.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .|.++|.|| +-+|.++|..|++.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            466777766 7899999999999999999999853

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.50  E-value=0.12  Score=33.86  Aligned_cols=32  Identities=28%  Similarity=0.360  Sum_probs=27.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      +.++|.|| +-||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            45666665 799999999999999999999886

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.39  E-value=0.13  Score=33.19  Aligned_cols=33  Identities=18%  Similarity=0.168  Sum_probs=28.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      |.++|.|| +-+|.++|..|++.|.+|.++.|.+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            56677665 7999999999999999999999864

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.37  E-value=0.025  Score=39.20  Aligned_cols=38  Identities=13%  Similarity=0.203  Sum_probs=31.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      +-+. |.+-+|.++|+.|+++|++|.+.+|++++.+...
T Consensus         4 Ig~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           4 IAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            4444 5588999999999999999999999988876654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.37  E-value=0.038  Score=36.38  Aligned_cols=34  Identities=29%  Similarity=0.358  Sum_probs=29.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      +|.++|.|| +-+|.++|..|+++|.+|.++.+.+
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            567777766 8999999999999999999999875

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.35  E-value=0.1  Score=34.12  Aligned_cols=34  Identities=18%  Similarity=0.193  Sum_probs=29.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .|.++|.|| +-||.++|..|++.|.+|.++.|++
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            467878776 7999999999999999999998864

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=94.31  E-value=0.2  Score=36.73  Aligned_cols=79  Identities=13%  Similarity=0.087  Sum_probs=55.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      +|++||=.|++.|   ..+..+++.|. +|+.+|.+++.++.+.+..++.....++.+...|.......           
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~-----------   89 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD-----------   89 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC-----------
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhccc-----------
Confidence            3788998998877   24556777775 69999999999988887776655456788888886544211           


Q ss_pred             cCCCccEEEEcCCC
Q 045749          141 DGLEVGVLINNVGI  154 (210)
Q Consensus       141 ~~~~id~lvnnAg~  154 (210)
                      .....|+++.+-+.
T Consensus        90 ~~~~fD~V~~~~~l  103 (252)
T d1ri5a_          90 LGKEFDVISSQFSF  103 (252)
T ss_dssp             CSSCEEEEEEESCG
T ss_pred             ccccceEEEEccee
Confidence            11258888877654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.25  E-value=0.16  Score=32.62  Aligned_cols=34  Identities=15%  Similarity=0.236  Sum_probs=28.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .|.++|.|| +-+|.++|..|++.|.+|.++.+.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            456777755 8999999999999999999998853

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.16  E-value=0.085  Score=37.59  Aligned_cols=38  Identities=18%  Similarity=0.187  Sum_probs=32.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChh
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~   98 (210)
                      +++||++.|.|. +.||+++|+.+...|++|+..++...
T Consensus        44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             eecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            456999999876 79999999999999999999987543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.05  E-value=0.03  Score=41.50  Aligned_cols=33  Identities=30%  Similarity=0.369  Sum_probs=28.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      +|.|+|.|| +--|...|.+|+++|++|++..++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            577888876 566899999999999999999875

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=94.00  E-value=0.042  Score=39.96  Aligned_cols=33  Identities=24%  Similarity=0.398  Sum_probs=28.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      .|.|+|.|| +=.|.+.|.+|+++|++|++++|+
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            345777776 678999999999999999999985

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.00  E-value=0.29  Score=35.35  Aligned_cols=78  Identities=15%  Similarity=0.172  Sum_probs=56.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      |..||-.|+++|--.++.-+++  |.+|+.++++++-.+...+.+.+.+ -.++.+...|.....            ...
T Consensus        79 g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g-~~nv~~~~gd~~~g~------------~~~  143 (215)
T d1jg1a_          79 GMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAG-VKNVHVILGDGSKGF------------PPK  143 (215)
T ss_dssp             TCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGCC------------GGG
T ss_pred             cceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcC-CceeEEEECccccCC------------ccc
Confidence            6789999999988888777776  5679999999887777777776643 467777777765431            111


Q ss_pred             CCccEEEEcCCCC
Q 045749          143 LEVGVLINNVGIT  155 (210)
Q Consensus       143 ~~id~lvnnAg~~  155 (210)
                      .+.|.++.+++..
T Consensus       144 ~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         144 APYDVIIVTAGAP  156 (215)
T ss_dssp             CCEEEEEECSBBS
T ss_pred             CcceeEEeecccc
Confidence            2688888887764

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.89  E-value=0.2  Score=34.31  Aligned_cols=84  Identities=18%  Similarity=0.190  Sum_probs=50.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHH-HHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKA-IEMAI  140 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~  140 (210)
                      +|+.+.|.+.|+|.|--.+..+.+.|.++.-  -+++.    .+++++..|.....--..|++-.... +.+.+ +....
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~--l~~~t----~~~L~~~lp~~~~~~NPlD~~~~~~~-~~~~~~l~~~~   74 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT--LEEKT----IEELRSFLPPMAAVKNPVDMIASARG-EDYYRTAKLLL   74 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC--CCHHH----HHHHHHHSCTTCEESSEEECCTTCCH-HHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC--CCHHH----HHHHHHhCCCcccCCCcccccCCCCH-HHHHHHHHHHH
Confidence            4888888899999999999999999976532  23333    33444433332222335677655333 33433 33344


Q ss_pred             cCCCccEEEEcC
Q 045749          141 DGLEVGVLINNV  152 (210)
Q Consensus       141 ~~~~id~lvnnA  152 (210)
                      .+..+|.++...
T Consensus        75 ~d~~vd~v~v~~   86 (163)
T d2csua3          75 QDPNVDMLIAIC   86 (163)
T ss_dssp             HSTTCSEEEEEE
T ss_pred             cCCCcCEEEEee
Confidence            444677765443

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.88  E-value=0.13  Score=36.21  Aligned_cols=37  Identities=24%  Similarity=0.210  Sum_probs=33.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .+.||++.|.|.+ .||+.+++.+..-|++|...+|++
T Consensus        39 ~l~gk~vgIiG~G-~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          39 LIQGEKVAVLGLG-EIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CCTTCEEEEESCS-THHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccCceEEEeccc-cccccceeeeeccccccccccccc
Confidence            3679999999885 599999999999999999999975

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.86  E-value=0.48  Score=36.03  Aligned_cols=76  Identities=14%  Similarity=0.132  Sum_probs=49.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      .+||+||-.|+++|+   ++..+++.|+ +|+.++.++. ...+.+..+...-..++.++..|..+..            
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~------------   95 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVE------------   95 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCC------------
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHcc------------
Confidence            358999999999885   5667788887 5889998754 4444444444433456777776655431            


Q ss_pred             hcCCCccEEEEcC
Q 045749          140 IDGLEVGVLINNV  152 (210)
Q Consensus       140 ~~~~~id~lvnnA  152 (210)
                      .+..++|+++..-
T Consensus        96 ~~~~~~D~ivs~~  108 (316)
T d1oria_          96 LPVEKVDIIISEW  108 (316)
T ss_dssp             CSSSCEEEEEECC
T ss_pred             cccceeEEEeeee
Confidence            1122577877653

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.84  E-value=0.061  Score=37.98  Aligned_cols=36  Identities=25%  Similarity=0.262  Sum_probs=31.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      ..+|.|+|.|| +--|.+.|..++++|++|++..++.
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            34788888877 6789999999999999999999863

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.84  E-value=0.097  Score=36.24  Aligned_cols=42  Identities=17%  Similarity=0.246  Sum_probs=37.0

Q ss_pred             CCcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhH
Q 045749           57 KNLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNK   99 (210)
Q Consensus        57 ~~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~   99 (210)
                      .+.-+.||+++|.|- +-.|+.+|+.+...|++|+++..++-+
T Consensus        17 t~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          17 TDFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             HCCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             hCceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            456678999999875 789999999999999999999999855

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.82  E-value=0.045  Score=35.93  Aligned_cols=34  Identities=32%  Similarity=0.445  Sum_probs=29.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      +|.++|.|| +-+|.++|..|++.|.+|+++.|++
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            356777766 7999999999999999999999864

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.81  E-value=0.041  Score=37.67  Aligned_cols=37  Identities=16%  Similarity=0.286  Sum_probs=32.6

Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHH
Q 045749           71 ATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        71 assGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      |.|-+|.++++.|.+.|+++++.+|+.++.++..++.
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            6689999999999999999999999998887776554

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.76  E-value=0.034  Score=39.03  Aligned_cols=34  Identities=18%  Similarity=0.247  Sum_probs=28.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLN-LILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~~   97 (210)
                      +|+|+|.|| +-.|...|.+|+++|++ |++..|+.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            567778776 78899999999999995 99988863

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=93.62  E-value=0.55  Score=35.80  Aligned_cols=79  Identities=10%  Similarity=-0.044  Sum_probs=49.8

Q ss_pred             CcEEEEEcCCC-hHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHHHHHh
Q 045749           63 GSWALITGATD-GIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAIEMAI  140 (210)
Q Consensus        63 gk~vlITGass-GiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~  140 (210)
                      |+.||=..+.+ +++.+    +++.|++|+.+|.++..++.+.+.++..+- ..++.++..|+.      +.++...+.-
T Consensus       133 ~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~~  202 (309)
T d2igta1         133 PLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERRG  202 (309)
T ss_dssp             CCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHHT
T ss_pred             CCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhcC
Confidence            67788666554 44443    456899999999999998888776655432 235666654432      2233333322


Q ss_pred             cCCCccEEEEcCC
Q 045749          141 DGLEVGVLINNVG  153 (210)
Q Consensus       141 ~~~~id~lvnnAg  153 (210)
                      .  +.|++|.+.-
T Consensus       203 ~--~fD~IilDPP  213 (309)
T d2igta1         203 S--TYDIILTDPP  213 (309)
T ss_dssp             C--CBSEEEECCC
T ss_pred             C--CCCEEEECCC
Confidence            2  6899998753

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.57  E-value=0.063  Score=34.90  Aligned_cols=35  Identities=14%  Similarity=0.292  Sum_probs=30.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .+|.++|.|| +-+|.++|..|++.|.+|.++.|.+
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            3678888766 7999999999999999999999864

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.38  E-value=0.087  Score=34.69  Aligned_cols=52  Identities=17%  Similarity=0.181  Sum_probs=36.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCD  126 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~  126 (210)
                      |.++|.|. +.+|.+++++|  +|..|++++.+++..+...    ..    .+.++..|.+++
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~----~~----~~~~i~Gd~~~~   52 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVL----RS----GANFVHGDPTRV   52 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHH----HT----TCEEEESCTTSH
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHH----hc----CccccccccCCH
Confidence            46788875 78999999999  4667888999888765432    21    345566676654

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.35  E-value=0.44  Score=32.08  Aligned_cols=77  Identities=13%  Similarity=0.189  Sum_probs=50.6

Q ss_pred             cCCcEEEEEcCCCh-HHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITGATDG-IGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITGassG-iG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .+|+.++=.|+++| +|.    +.+.+|+ +|+.++.+++..+.+.+.++......++.+++.|..          +..+
T Consensus        13 ~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~----------~~l~   78 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAE----------RAID   78 (152)
T ss_dssp             CCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHH----------HHHH
T ss_pred             CCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhccccc----------cccc
Confidence            45888887776655 554    4567887 699999999988887777766544455666655432          2222


Q ss_pred             HhcCCCccEEEEcC
Q 045749          139 AIDGLEVGVLINNV  152 (210)
Q Consensus       139 ~~~~~~id~lvnnA  152 (210)
                      ... .+.|+++.+.
T Consensus        79 ~~~-~~fDiIf~DP   91 (152)
T d2esra1          79 CLT-GRFDLVFLDP   91 (152)
T ss_dssp             HBC-SCEEEEEECC
T ss_pred             ccc-cccceeEech
Confidence            222 2689998764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.18  E-value=0.047  Score=40.46  Aligned_cols=31  Identities=32%  Similarity=0.372  Sum_probs=26.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      |+|.|| +-.|.++|.+|+++|.+|+++++++
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            566655 7889999999999999999999864

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.10  E-value=0.18  Score=35.32  Aligned_cols=76  Identities=14%  Similarity=0.194  Sum_probs=52.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      |.+++=.|+++|   .++..+++.+.+|+.++.+++.++.+.+.+++.+-..++.++..|..          ......  
T Consensus        34 g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~--   98 (186)
T d1l3ia_          34 NDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKI--   98 (186)
T ss_dssp             TCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTS--
T ss_pred             CCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hccccc--
Confidence            778887888776   33445667788999999999999988888877643456777665532          221111  


Q ss_pred             CCccEEEEcCC
Q 045749          143 LEVGVLINNVG  153 (210)
Q Consensus       143 ~~id~lvnnAg  153 (210)
                      ..+|.++.+.+
T Consensus        99 ~~~D~v~~~~~  109 (186)
T d1l3ia_          99 PDIDIAVVGGS  109 (186)
T ss_dssp             CCEEEEEESCC
T ss_pred             CCcCEEEEeCc
Confidence            26888886643

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=92.92  E-value=0.66  Score=32.92  Aligned_cols=58  Identities=16%  Similarity=0.120  Sum_probs=42.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS  124 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~  124 (210)
                      ++.||=.|++.|.-   +..++++|++|+.+|.+++-++.+.+.+.... ..++.+...|..
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~-~~~i~~~~~d~~   73 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNG-HQQVEYVQGDAE   73 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEECCC-
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccc-cccccccccccc
Confidence            57889889888843   46678899999999999988877766665542 345666666544

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.91  E-value=0.08  Score=37.87  Aligned_cols=37  Identities=24%  Similarity=0.250  Sum_probs=31.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKI  103 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~  103 (210)
                      +.|. |.|-+|..+|..|+++|++|+..|.++++.++.
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            3444 668999999999999999999999998776554

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.85  E-value=0.37  Score=36.86  Aligned_cols=60  Identities=18%  Similarity=0.228  Sum_probs=41.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEeccc
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC  125 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~  125 (210)
                      +|++||-.|++.|+   ++..++++|+ +|+.++.++ .++.+.+..+......++.++..|+.+
T Consensus        38 ~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~   98 (328)
T d1g6q1_          38 KDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLED   98 (328)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred             CcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhh
Confidence            48999999998884   4566788897 588888775 444445555555445667777766543

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.84  E-value=0.37  Score=34.30  Aligned_cols=71  Identities=17%  Similarity=0.124  Sum_probs=47.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ++.||+|+=-|+++|+   ++..++..|+ +|+.++.+++.++.+.+.      -.++.++..|+.+.            
T Consensus        46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N------~~~~~~~~~D~~~l------------  104 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN------CGGVNFMVADVSEI------------  104 (197)
T ss_dssp             SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH------CTTSEEEECCGGGC------------
T ss_pred             CCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc------cccccEEEEehhhc------------
Confidence            3459999999998883   3345677786 599999998776654332      23455666665422            


Q ss_pred             HhcCCCccEEEEcCCC
Q 045749          139 AIDGLEVGVLINNVGI  154 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~  154 (210)
                        + .++|++|.|--.
T Consensus       105 --~-~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 --S-GKYDTWIMNPPF  117 (197)
T ss_dssp             --C-CCEEEEEECCCC
T ss_pred             --C-CcceEEEeCccc
Confidence              1 269999988643

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.82  E-value=0.5  Score=34.15  Aligned_cols=80  Identities=15%  Similarity=0.176  Sum_probs=56.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCC----CceeEEEEEecccCccchhhHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENP----NTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      |..||-.|+++|---++.-++.....+|+.++++++-++.+.+.+++...    ...+.+...|.....           
T Consensus        77 g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~-----------  145 (224)
T d1i1na_          77 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY-----------  145 (224)
T ss_dssp             TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC-----------
T ss_pred             CCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc-----------
Confidence            78999999999988887777877778999999999888887777765422    134455555543321           


Q ss_pred             HhcCCCccEEEEcCCC
Q 045749          139 AIDGLEVGVLINNVGI  154 (210)
Q Consensus       139 ~~~~~~id~lvnnAg~  154 (210)
                       ....++|.++.+++.
T Consensus       146 -~~~~~fD~I~~~~~~  160 (224)
T d1i1na_         146 -AEEAPYDAIHVGAAA  160 (224)
T ss_dssp             -GGGCCEEEEEECSBB
T ss_pred             -chhhhhhhhhhhcch
Confidence             011268899888764

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.81  E-value=0.098  Score=38.03  Aligned_cols=35  Identities=26%  Similarity=0.287  Sum_probs=30.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      ..+|.++|.|| +--|...|.+++++|++|++..++
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~   81 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTA   81 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeec
Confidence            45788999987 566899999999999999999875

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=92.47  E-value=0.04  Score=41.19  Aligned_cols=38  Identities=21%  Similarity=0.315  Sum_probs=32.4

Q ss_pred             cCCcEEEEEcCCChHHHHH-----HHHHHHcCCeEEEEecChh
Q 045749           61 SYGSWALITGATDGIGKAF-----AHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~-----a~~l~~~G~~Vi~~~r~~~   98 (210)
                      ..|+.++|+.|-||.||..     |..|+++|.+|.++|-+.+
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3477888888899999985     7899999999999998854

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.36  E-value=0.12  Score=34.40  Aligned_cols=34  Identities=15%  Similarity=0.249  Sum_probs=29.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      +|.++|.|| |-+|.++|..|++.|.+|.++.+.+
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            567788765 8999999999999999999998863

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.26  E-value=0.28  Score=32.40  Aligned_cols=72  Identities=19%  Similarity=0.281  Sum_probs=47.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEE-EecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCC
Q 045749           65 WALITGATDGIGKAFAHQLAQHGLNLIL-VSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGL  143 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~~G~~Vi~-~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  143 (210)
                      .+.|.|++|-+|+++++.+.++|++++. .+++..+          ...+..   +..|+|.++...+.++...+.    
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~----------~~~~~D---VvIDFS~p~~~~~~l~~~~~~----   64 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE----------ELDSPD---VVIDFSSPEALPKTVDLCKKY----   64 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE----------ECSCCS---EEEECSCGGGHHHHHHHHHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH----------HhccCC---EEEEecCHHHHHHHHHHHHhc----
Confidence            3789999999999999999999998664 4544321          011222   346999987666655555443    


Q ss_pred             CccEEEEcCC
Q 045749          144 EVGVLINNVG  153 (210)
Q Consensus       144 ~id~lvnnAg  153 (210)
                      ++-+++-..|
T Consensus        65 ~~p~ViGTTG   74 (128)
T d1vm6a3          65 RAGLVLGTTA   74 (128)
T ss_dssp             TCEEEECCCS
T ss_pred             CCCEEEEcCC
Confidence            2446665554

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.24  E-value=0.13  Score=33.92  Aligned_cols=34  Identities=24%  Similarity=0.189  Sum_probs=29.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .+.++|.|| |-||.++|..|.+.|.+|.++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            567888876 7999999999999999999998753

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=92.19  E-value=0.48  Score=34.33  Aligned_cols=74  Identities=14%  Similarity=0.012  Sum_probs=49.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      |..||-.|+++|--.   ..|++.+.+|+.++++++..+.+.+.+..   ..++.++..|.....  .        ..  
T Consensus        71 g~~VLdIG~GsGy~t---a~La~l~~~V~aiE~~~~~~~~A~~~~~~---~~nv~~~~~d~~~g~--~--------~~--  132 (224)
T d1vbfa_          71 GQKVLEIGTGIGYYT---ALIAEIVDKVVSVEINEKMYNYASKLLSY---YNNIKLILGDGTLGY--E--------EE--  132 (224)
T ss_dssp             TCEEEEECCTTSHHH---HHHHHHSSEEEEEESCHHHHHHHHHHHTT---CSSEEEEESCGGGCC--G--------GG--
T ss_pred             cceEEEecCCCCHHH---HHHHHHhcccccccccHHHHHHHHHHHhc---ccccccccCchhhcc--h--------hh--
Confidence            778999999888543   34666778999999998877766554332   346666666654321  0        01  


Q ss_pred             CCccEEEEcCCC
Q 045749          143 LEVGVLINNVGI  154 (210)
Q Consensus       143 ~~id~lvnnAg~  154 (210)
                      .+.|.++.+++.
T Consensus       133 ~pfD~Iiv~~a~  144 (224)
T d1vbfa_         133 KPYDRVVVWATA  144 (224)
T ss_dssp             CCEEEEEESSBB
T ss_pred             hhHHHHHhhcch
Confidence            268888888764

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.19  E-value=0.11  Score=35.14  Aligned_cols=32  Identities=9%  Similarity=0.214  Sum_probs=27.2

Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEecChhHHHH
Q 045749           71 ATDGIGKAFAHQLAQHGLNLILVSRNHNKLEK  102 (210)
Q Consensus        71 assGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~  102 (210)
                      |.+-+|.++|+.|+++|++|+..+++.++...
T Consensus         7 G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~   38 (152)
T d1i36a2           7 GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTI   38 (152)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred             cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence            55999999999999999999999887665443

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.16  E-value=1.1  Score=30.44  Aligned_cols=74  Identities=11%  Similarity=0.005  Sum_probs=38.7

Q ss_pred             EEEEcCCChHHHHHHHH--HHHc----CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHH
Q 045749           66 ALITGATDGIGKAFAHQ--LAQH----GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMA  139 (210)
Q Consensus        66 vlITGassGiG~~~a~~--l~~~----G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  139 (210)
                      +.|.||+| .|...+..  +...    +..+++.|.++++++...+...... .....   ...+.+         -.+.
T Consensus         3 IaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~-~~~~~---~~~t~~---------~~~~   68 (162)
T d1up7a1           3 IAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLV-KDRFK---VLISDT---------FEGA   68 (162)
T ss_dssp             EEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHH-TTSSE---EEECSS---------HHHH
T ss_pred             EEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhh-ccCce---EEEecC---------cccc
Confidence            55667644 44444332  2222    3579999999998775443333221 11111   112222         1223


Q ss_pred             hcCCCccEEEEcCCCC
Q 045749          140 IDGLEVGVLINNVGIT  155 (210)
Q Consensus       140 ~~~~~id~lvnnAg~~  155 (210)
                      ..  +-|++|+.||..
T Consensus        69 l~--~aDvVVita~~~   82 (162)
T d1up7a1          69 VV--DAKYVIFQFRPG   82 (162)
T ss_dssp             HT--TCSEEEECCCTT
T ss_pred             cC--CCCEEEEecccC
Confidence            33  468999999874

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=92.04  E-value=0.032  Score=37.99  Aligned_cols=38  Identities=13%  Similarity=0.130  Sum_probs=27.8

Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHH
Q 045749           71 ATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQ  108 (210)
Q Consensus        71 assGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~  108 (210)
                      |+|-+|+++++.|.+.+..+.+.+|+.++++++.++..
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~   43 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG   43 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc
Confidence            56789999999886655445689999999988877653

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.98  E-value=0.041  Score=45.65  Aligned_cols=58  Identities=17%  Similarity=0.252  Sum_probs=42.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC-------------------hhHHHHHHHHHHhhCCCceeEEE
Q 045749           61 SYGSWALITGATDGIGKAFAHQLAQHGL-NLILVSRN-------------------HNKLEKISNEIQAENPNTQINIV  119 (210)
Q Consensus        61 ~~gk~vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~-------------------~~~l~~~~~~l~~~~~~~~~~~~  119 (210)
                      +....|+|.|+ +|+|-++++.|+..|. +++++|.+                   ..+.+.+.+.+.+.+|..++..+
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~  100 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFV  100 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEE
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEE
Confidence            34678999886 7999999999999996 58888764                   23455666677777666555444

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=91.94  E-value=1.1  Score=33.02  Aligned_cols=59  Identities=15%  Similarity=0.058  Sum_probs=42.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS  124 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~  124 (210)
                      |.++|=.|++.|.   .+..|+++ |++|+.++.++..++.+.+.....+-..++.+..+|..
T Consensus        68 ~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~  127 (282)
T d2o57a1          68 QAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL  127 (282)
T ss_dssp             TCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT
T ss_pred             CCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccc
Confidence            6788888887663   44455554 89999999999888777776666544456667766654

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=91.89  E-value=0.47  Score=35.50  Aligned_cols=79  Identities=10%  Similarity=0.117  Sum_probs=49.5

Q ss_pred             cEEEEEcCCCh-HHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITGATDG-IGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITGassG-iG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      +.++-.|++|| |+.+++ +  ...++|+.+|.+++.++-+.+..+...-...+.+...|+.+.         ..+..+ 
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~-  178 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFA-  178 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTT-
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccC-
Confidence            45565555555 555554 3  357899999999999888777776543344555555554332         111122 


Q ss_pred             CCccEEEEcCCCCC
Q 045749          143 LEVGVLINNVGITY  156 (210)
Q Consensus       143 ~~id~lvnnAg~~~  156 (210)
                       ++|++|.|--...
T Consensus       179 -~fDlIVsNPPYI~  191 (271)
T d1nv8a_         179 -SIEMILSNPPYVK  191 (271)
T ss_dssp             -TCCEEEECCCCBC
T ss_pred             -cccEEEEcccccC
Confidence             6899999987653

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=91.87  E-value=0.053  Score=38.63  Aligned_cols=31  Identities=16%  Similarity=0.243  Sum_probs=27.5

Q ss_pred             cEEEEEcCCChHHHH-----HHHHHHHcCCeEEEEe
Q 045749           64 SWALITGATDGIGKA-----FAHQLAQHGLNLILVS   94 (210)
Q Consensus        64 k~vlITGassGiG~~-----~a~~l~~~G~~Vi~~~   94 (210)
                      |...|||.++|.||-     +|+.|+++|.+|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            678999999999986     6788999999999986

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=91.78  E-value=0.84  Score=34.81  Aligned_cols=80  Identities=15%  Similarity=0.021  Sum_probs=50.7

Q ss_pred             CCcEEEEEcCC-ChHHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhCC-CceeEEEEEecccCccchhhHHHHHH
Q 045749           62 YGSWALITGAT-DGIGKAFAHQLAQHGL-NLILVSRNHNKLEKISNEIQAENP-NTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        62 ~gk~vlITGas-sGiG~~~a~~l~~~G~-~Vi~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      .|+.||=..+. +|++.+    .++.|+ .|+.++.++..++-..+.++...- ..++.++..|.-      +..+...+
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            47888876654 555533    456787 599999999988887777765432 245666665542      22333333


Q ss_pred             HhcCCCccEEEEcCC
Q 045749          139 AIDGLEVGVLINNVG  153 (210)
Q Consensus       139 ~~~~~~id~lvnnAg  153 (210)
                      .-  .+.|++|.+.-
T Consensus       214 ~~--~~fD~Ii~DPP  226 (317)
T d2b78a2         214 HH--LTYDIIIIDPP  226 (317)
T ss_dssp             TT--CCEEEEEECCC
T ss_pred             hc--CCCCEEEEcCh
Confidence            32  27999998864

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.75  E-value=0.26  Score=35.10  Aligned_cols=37  Identities=14%  Similarity=0.095  Sum_probs=32.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      ++.||++.|.|. |.||+++|+.+..-|++|+..++..
T Consensus        42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence            466999999976 7899999999999999999999854

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.75  E-value=0.082  Score=38.13  Aligned_cols=35  Identities=23%  Similarity=0.416  Sum_probs=30.3

Q ss_pred             CCcEEEEEcCCChHHHH-----HHHHHHHcCCeEEEEecC
Q 045749           62 YGSWALITGATDGIGKA-----FAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        62 ~gk~vlITGassGiG~~-----~a~~l~~~G~~Vi~~~r~   96 (210)
                      .||++.|+|+-+|.|+.     +|..|+++|.+|.++|-+
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            37899999999999986     577888999999999865

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=91.64  E-value=0.54  Score=32.98  Aligned_cols=91  Identities=9%  Similarity=0.024  Sum_probs=52.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCC--CceeE------EEEEecccCccchhhHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENP--NTQIN------IVEYDFSCDVVSAGNIK  134 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~--~~~~~------~~~~D~~~~~~~~~~~~  134 (210)
                      .-.|+|.|| +-.|.+-++...+.|++|.+.|.+.++++++.+.....-.  .....      -+.-.++.+ .....-+
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~-~~~~~~~  106 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEE-FRKKQAE  106 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC------------------------CCHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHH-HHHHHHH
Confidence            456777776 5678999999999999999999999887765432110000  00000      000011111 1222335


Q ss_pred             HHHHHhcCCCccEEEEcCCCCCC
Q 045749          135 AIEMAIDGLEVGVLINNVGITYP  157 (210)
Q Consensus       135 ~~~~~~~~~~id~lvnnAg~~~~  157 (210)
                      .+.+.+.  +-|++|..|=+...
T Consensus       107 ~l~~~l~--~aDlVI~talipG~  127 (183)
T d1l7da1         107 AVLKELV--KTDIAITTALIPGK  127 (183)
T ss_dssp             HHHHHHT--TCSEEEECCCCTTS
T ss_pred             HHHHHHH--hhhhheeeeecCCc
Confidence            5666666  58899988876544

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.61  E-value=0.76  Score=32.03  Aligned_cols=75  Identities=19%  Similarity=0.200  Sum_probs=50.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhC-CCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN-PNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      +++|+=.|+++|   .++..+++.+.+|+.++.++...+.+.+.++... ...++.+...|..+.             ..
T Consensus        53 ~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~-------------~~  116 (194)
T d1dusa_          53 DDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN-------------VK  116 (194)
T ss_dssp             TCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-------------CT
T ss_pred             CCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh-------------hc
Confidence            778888888776   3445567788899999999988887776665432 234566666665322             11


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      ....|.++.|.-
T Consensus       117 ~~~fD~Ii~~~p  128 (194)
T d1dusa_         117 DRKYNKIITNPP  128 (194)
T ss_dssp             TSCEEEEEECCC
T ss_pred             cCCceEEEEccc
Confidence            126889998753

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.54  E-value=0.11  Score=38.88  Aligned_cols=34  Identities=24%  Similarity=0.258  Sum_probs=28.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .|.|+|.|| |--|...|.+|+++|++|++..+++
T Consensus        30 pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          30 PKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            567888877 4559999999999999999998764

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.54  E-value=0.14  Score=37.14  Aligned_cols=42  Identities=12%  Similarity=0.098  Sum_probs=36.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      |+.||.-|++.|   ..+..|+++|++|+.+|.+++.++.+.++.
T Consensus        46 ~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          46 GLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             SCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            678999999887   568889999999999999998887766654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.40  E-value=0.14  Score=34.80  Aligned_cols=35  Identities=17%  Similarity=0.220  Sum_probs=29.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGL--NLILVSRNH   97 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~--~Vi~~~r~~   97 (210)
                      .||+++|.|| |-.|.++|.+|.+.|.  +|+++++++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3889999988 5679999999999885  688888764

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=91.31  E-value=0.15  Score=37.13  Aligned_cols=34  Identities=18%  Similarity=0.198  Sum_probs=27.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .+.|+|.|| |--|..+|..|+++|.+|++..|+.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            456777776 5668889999999999999999864

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.21  E-value=0.63  Score=32.48  Aligned_cols=58  Identities=17%  Similarity=0.189  Sum_probs=40.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS  124 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~  124 (210)
                      ++.||=.|++.|.   .+..|+++|++|+.+|.+++.++.+.+...+.. -..+.+...|+.
T Consensus        31 ~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~~~~~d~~   88 (198)
T d2i6ga1          31 PGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEG-LDNLQTDLVDLN   88 (198)
T ss_dssp             SCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEECCTT
T ss_pred             CCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhcc-ccchhhhheecc
Confidence            4578888987664   566888999999999999998887766655432 223445555543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.12  E-value=0.3  Score=34.04  Aligned_cols=32  Identities=22%  Similarity=0.379  Sum_probs=27.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChh
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~   98 (210)
                      +.|.|| |..|.++|..|++.|.+|.+++|..+
T Consensus         3 I~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           3 VSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            455655 88999999999999999999999644

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=90.98  E-value=0.33  Score=33.53  Aligned_cols=46  Identities=15%  Similarity=0.220  Sum_probs=33.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAEN  111 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~  111 (210)
                      |+.++=.|+++|.   ++-+.+++|++|+.++.+++..+.+.+.++...
T Consensus        42 g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~   87 (171)
T d1ws6a1          42 RGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTG   87 (171)
T ss_dssp             CCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHT
T ss_pred             CCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhc
Confidence            6667755655442   334566789999999999999888877776653

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.95  E-value=0.43  Score=33.30  Aligned_cols=80  Identities=15%  Similarity=0.231  Sum_probs=51.3

Q ss_pred             cCCcEEEEEc-CCChHHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHH
Q 045749           61 SYGSWALITG-ATDGIGKAFAHQLAQHGLN-LILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEM  138 (210)
Q Consensus        61 ~~gk~vlITG-assGiG~~~a~~l~~~G~~-Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  138 (210)
                      ..|+.++=.. |+|++|.+    .+.+|++ |+.++.+.+..+.+.+.++......++.++..|+..      ..+.+..
T Consensus        40 ~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~~~  109 (182)
T d2fhpa1          40 FDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQFYE  109 (182)
T ss_dssp             CSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHHHH
T ss_pred             cCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhhcc
Confidence            3477777444 55667775    4568885 999999999888887777665444567776655432      2233322


Q ss_pred             HhcCCCccEEEEcC
Q 045749          139 AIDGLEVGVLINNV  152 (210)
Q Consensus       139 ~~~~~~id~lvnnA  152 (210)
                      .  +.+.|+++.+.
T Consensus       110 ~--~~~fDlIflDP  121 (182)
T d2fhpa1         110 E--KLQFDLVLLDP  121 (182)
T ss_dssp             T--TCCEEEEEECC
T ss_pred             c--CCCcceEEech
Confidence            2  22689998654

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=90.87  E-value=0.13  Score=38.18  Aligned_cols=30  Identities=33%  Similarity=0.537  Sum_probs=25.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      |+|.|| +-.|.++|++|+++|.+|+++++.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            556655 677999999999999999999874

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=90.77  E-value=0.28  Score=30.58  Aligned_cols=35  Identities=17%  Similarity=0.190  Sum_probs=25.3

Q ss_pred             cEEEEEcCCChHH-HHHHHHHHHcCCeEEEEecChhH
Q 045749           64 SWALITGATDGIG-KAFAHQLAQHGLNLILVSRNHNK   99 (210)
Q Consensus        64 k~vlITGassGiG-~~~a~~l~~~G~~Vi~~~r~~~~   99 (210)
                      |.+-+.|- +|+| .++|+.|.++|++|...|++...
T Consensus         9 ~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~   44 (96)
T d1p3da1           9 QQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGV   44 (96)
T ss_dssp             CEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSH
T ss_pred             CEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCCh
Confidence            44555543 4445 34799999999999999998644

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=90.27  E-value=0.17  Score=38.23  Aligned_cols=32  Identities=22%  Similarity=0.415  Sum_probs=23.7

Q ss_pred             cEEEEEcCCChHHH-----HHHHHHHHcCCeEEEEecC
Q 045749           64 SWALITGATDGIGK-----AFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        64 k~vlITGassGiG~-----~~a~~l~~~G~~Vi~~~r~   96 (210)
                      |.++|++|++| |-     +++++|.++|++|..++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45677766555 55     6889999999999877643

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.27  E-value=0.16  Score=38.06  Aligned_cols=30  Identities=27%  Similarity=0.530  Sum_probs=25.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL-NLILVSRN   96 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~   96 (210)
                      |+|.|| +-+|.++|.+|+++|. +|++++|+
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            566665 6899999999999996 59999886

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=90.13  E-value=0.21  Score=37.14  Aligned_cols=35  Identities=20%  Similarity=0.222  Sum_probs=30.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVS   94 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~   94 (210)
                      .+++||+++|.| .+-.|..+|+.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            456799999998 68999999999999999987654

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.13  E-value=0.13  Score=32.69  Aligned_cols=39  Identities=15%  Similarity=0.088  Sum_probs=31.6

Q ss_pred             CcccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           58 NLKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        58 ~~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .....||.|+|.|++ --|..+|.++++.+.+++...|..
T Consensus        27 ~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          27 PELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            345679999999885 668899999999988888777764

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.70  E-value=0.48  Score=34.02  Aligned_cols=83  Identities=16%  Similarity=0.104  Sum_probs=53.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      .|+++=+|...|......-+....|.+|+.++.+++..+.+.+.++..+-..++..+..|..+.      +.++.+....
T Consensus        57 pk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~------l~~l~~~~~~  130 (214)
T d2cl5a1          57 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDL------IPQLKKKYDV  130 (214)
T ss_dssp             CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH------GGGHHHHSCC
T ss_pred             CCEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeecccccc------ccchhhcccc
Confidence            5789999987776543322222457799999999988888888777765455677776554321      2334444433


Q ss_pred             CCccEEEEc
Q 045749          143 LEVGVLINN  151 (210)
Q Consensus       143 ~~id~lvnn  151 (210)
                      ..+|.++..
T Consensus       131 ~~~D~ifiD  139 (214)
T d2cl5a1         131 DTLDMVFLD  139 (214)
T ss_dssp             CCEEEEEEC
T ss_pred             cccceeeec
Confidence            357777655

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.49  E-value=0.2  Score=35.39  Aligned_cols=31  Identities=10%  Similarity=0.238  Sum_probs=25.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      |+|.|| |=-|...|.+|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            566664 5668999999999999999999864

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=89.38  E-value=0.71  Score=33.99  Aligned_cols=63  Identities=17%  Similarity=0.172  Sum_probs=46.2

Q ss_pred             CCcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEeccc
Q 045749           62 YGSWALITGATDG-IGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC  125 (210)
Q Consensus        62 ~gk~vlITGassG-iG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~  125 (210)
                      .|.+|+=.|+++| +...+|+.+.. +.+|+.++++++.++.+.+.+++.....++.+...|+.+
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~-~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~  148 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD  148 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeec
Confidence            3788998998766 45666665544 348999999999999988888775545667777666543

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.27  E-value=0.14  Score=36.69  Aligned_cols=34  Identities=24%  Similarity=0.365  Sum_probs=29.1

Q ss_pred             cEEEEEcCCChHHHH-----HHHHHHHcCCeEEEEecCh
Q 045749           64 SWALITGATDGIGKA-----FAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        64 k~vlITGassGiG~~-----~a~~l~~~G~~Vi~~~r~~   97 (210)
                      |++.|+++-+|.|+.     +|..|+++|.+|.++|-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            688999999999886     5778889999999998763

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.05  E-value=0.27  Score=37.49  Aligned_cols=34  Identities=26%  Similarity=0.391  Sum_probs=28.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      .|.++|.|| |=-|..+|.+|+++|.+|.+..++.
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            567888876 5568899999999999999998764

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.00  E-value=1.2  Score=28.34  Aligned_cols=34  Identities=21%  Similarity=0.153  Sum_probs=26.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc---CCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQH---GLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~---G~~Vi~~~r~~   97 (210)
                      .|.++|.|| +.+|.++|..|.+.   |.+|.++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            467888877 89999999777654   56799998854

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.81  E-value=0.63  Score=35.15  Aligned_cols=34  Identities=15%  Similarity=0.104  Sum_probs=30.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVS   94 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~   94 (210)
                      ++.||+++|-|- +..|..+|+.|.+.|++|+.++
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            467999999876 7999999999999999988765

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=88.70  E-value=1.8  Score=27.35  Aligned_cols=34  Identities=26%  Similarity=0.242  Sum_probs=26.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHH---cCCeEEEEecCh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQ---HGLNLILVSRNH   97 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~---~G~~Vi~~~r~~   97 (210)
                      .|.++|.|| +-+|.++|..|++   .|.+|.++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            467888876 7899999987665   488999998863

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.54  E-value=0.34  Score=35.66  Aligned_cols=34  Identities=29%  Similarity=0.312  Sum_probs=29.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe
Q 045749           60 KSYGSWALITGATDGIGKAFAHQLAQHGLNLILVS   94 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~   94 (210)
                      ++.||+++|-| .+-.|..+|+.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            46699999986 68999999999999999988665

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.39  E-value=0.79  Score=30.36  Aligned_cols=75  Identities=21%  Similarity=0.314  Sum_probs=44.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHH-cCCeEE-EEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           65 WALITGATDGIGKAFAHQLAQ-HGLNLI-LVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        65 ~vlITGassGiG~~~a~~l~~-~G~~Vi-~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      ++.|.|++|-+|+++++...+ .++.++ ..++.+. +.    .+...  +..   +..|+|.+....+.++...+.   
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~----~~~~~--~~D---vvIDFS~p~~~~~~~~~~~~~---   67 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LS----LLTDG--NTE---VVIDFTHPDVVMGNLEFLIDN---   67 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-TH----HHHTT--TCS---EEEECCCTTTHHHHHHHHHHT---
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hh----hhccc--cCC---EEEEcccHHHHHHHHHHHHhc---
Confidence            478999999999999998765 456654 3455432 11    11111  222   347999997666655544433   


Q ss_pred             CCccEEEEcCC
Q 045749          143 LEVGVLINNVG  153 (210)
Q Consensus       143 ~~id~lvnnAg  153 (210)
                       .+-+++-..|
T Consensus        68 -~~~~ViGTTG   77 (135)
T d1yl7a1          68 -GIHAVVGTTG   77 (135)
T ss_dssp             -TCEEEECCCC
T ss_pred             -CCCEEEeccc
Confidence             2446664444

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=88.28  E-value=0.42  Score=29.34  Aligned_cols=37  Identities=16%  Similarity=0.138  Sum_probs=28.0

Q ss_pred             CCChHHH-HHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh
Q 045749           71 ATDGIGK-AFAHQLAQHGLNLILVSRNHNKLEKISNEIQAE  110 (210)
Q Consensus        71 assGiG~-~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~  110 (210)
                      |-+|+|. ++|+.|.++|+.|...|+++....   +.|++.
T Consensus         8 GIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t---~~L~~~   45 (89)
T d1j6ua1           8 GIGGIGMSAVALHEFSNGNDVYGSNIEETERT---AYLRKL   45 (89)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECSSCCHHH---HHHHHT
T ss_pred             eECHHHHHHHHHHHHhCCCeEEEEeCCCChhH---HHHHHC
Confidence            5577887 589999999999999999865433   345554

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=88.00  E-value=1.2  Score=31.96  Aligned_cols=60  Identities=13%  Similarity=0.177  Sum_probs=43.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEeccc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQ-HGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSC  125 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~-~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~  125 (210)
                      |+.||=.|++.|   .++..+++ .|++|+.++.++.-++...+...+.+.+.++.+...|..+
T Consensus        34 g~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~   94 (245)
T d1nkva_          34 GTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG   94 (245)
T ss_dssp             TCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT
T ss_pred             CCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhh
Confidence            778888888777   24555655 4899999999998888777666655445567777766543

>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Methyltransferase 10 domain
domain: Methyltransferase 10 domain containing protein METT10D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.89  E-value=0.51  Score=34.71  Aligned_cols=84  Identities=11%  Similarity=0.093  Sum_probs=54.4

Q ss_pred             cEEEEEc-CCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITG-ATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITG-assGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      ..++=.| |+|.|+..+++++-  +++++.++.+++.++-+.+-++...-..++.....|..++.  ..   .+.+ ...
T Consensus        63 ~~~LDiGtGsg~I~~~l~~~~~--~~~~~~~Di~~~al~~A~~N~~~n~l~~~~~~~~~~~~~~~--~~---~~~~-~~~  134 (250)
T d2h00a1          63 RRGIDIGTGASCIYPLLGATLN--GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLL--MD---ALKE-ESE  134 (250)
T ss_dssp             CEEEEESCTTTTHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSS--TT---TSTT-CCS
T ss_pred             ceEEEeCCCchHHHHHHHHhCC--CccccceecCHHHHHHHHHHHHHhCCCcceeeeeeccHHhh--hh---hhhh-ccc
Confidence            4566566 55679999998873  78999999999998887777766544555665554432221  11   1111 122


Q ss_pred             CCccEEEEcCCCC
Q 045749          143 LEVGVLINNVGIT  155 (210)
Q Consensus       143 ~~id~lvnnAg~~  155 (210)
                      .++|++|.|--..
T Consensus       135 ~~fD~ivsNPPY~  147 (250)
T d2h00a1         135 IIYDFCMCNPPFF  147 (250)
T ss_dssp             CCBSEEEECCCCC
T ss_pred             CceeEEEecCccc
Confidence            3699999998654

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=87.87  E-value=1.3  Score=31.65  Aligned_cols=58  Identities=17%  Similarity=0.051  Sum_probs=42.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS  124 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~  124 (210)
                      |.+||=.|++.|.   ++..++++|++|+.+|.+++-++.+.+.+...+ -.++.+++.|..
T Consensus        17 ~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~-~~~~~~~~~d~~   74 (234)
T d1xxla_          17 EHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKG-VENVRFQQGTAE   74 (234)
T ss_dssp             TCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHT-CCSEEEEECBTT
T ss_pred             CCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhcccc-cccccccccccc
Confidence            7788989988884   445677789999999999988877776666543 234666666654

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.69  E-value=1.3  Score=32.76  Aligned_cols=45  Identities=16%  Similarity=0.135  Sum_probs=36.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAE  110 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~  110 (210)
                      ++.||=.|++.|.   .+..|+++|++|+.+|.+++-++.+.+.....
T Consensus        57 ~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~  101 (292)
T d1xvaa_          57 CHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNR  101 (292)
T ss_dssp             CCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhc
Confidence            5789999988776   46667888999999999999888777666543

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.60  E-value=2.2  Score=30.09  Aligned_cols=75  Identities=16%  Similarity=-0.009  Sum_probs=48.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  141 (210)
                      ++.+|=.|++.|.   .+.+++++ +.+|+.+|-+++-++.+.+.+.... .....+...|+.+..            ..
T Consensus        61 ~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~-~~~~~f~~~d~~~~~------------~~  124 (222)
T d2ex4a1          61 TSCALDCGAGIGR---ITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFT------------PE  124 (222)
T ss_dssp             CSEEEEETCTTTH---HHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCC------------CC
T ss_pred             CCEEEEeccCCCH---hhHHHHHhcCCEEEEeecCHHHhhcccccccccc-ccccccccccccccc------------cc
Confidence            5778888987774   44444444 4579999999988888776665432 345677777765431            11


Q ss_pred             CCCccEEEEcCC
Q 045749          142 GLEVGVLINNVG  153 (210)
Q Consensus       142 ~~~id~lvnnAg  153 (210)
                      ....|+++.+..
T Consensus       125 ~~~fD~I~~~~~  136 (222)
T d2ex4a1         125 PDSYDVIWIQWV  136 (222)
T ss_dssp             SSCEEEEEEESC
T ss_pred             cccccccccccc
Confidence            125788876653

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=87.58  E-value=0.99  Score=31.45  Aligned_cols=66  Identities=14%  Similarity=0.221  Sum_probs=42.6

Q ss_pred             HHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcCCCccEEEEcCCCCCC
Q 045749           80 AHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDGLEVGVLINNVGITYP  157 (210)
Q Consensus        80 a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~id~lvnnAg~~~~  157 (210)
                      .+.+++++.+|+.+||+++.++...+    .. ..++.++..++++       +.+.....+...+|.++..-|++..
T Consensus        33 s~~iL~~~~~viaiD~D~~ai~~a~~----~~-~~~~~~~~~~f~~-------~~~~l~~~~~~~vdgIl~DLGvSs~   98 (182)
T d1wg8a2          33 ARGILERGGRVIGLDQDPEAVARAKG----LH-LPGLTVVQGNFRH-------LKRHLAALGVERVDGILADLGVSSF   98 (182)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHH----TC-CTTEEEEESCGGG-------HHHHHHHTTCSCEEEEEEECSCCHH
T ss_pred             HHHHhcccCcEEEEhhhhhHHHHHhh----cc-ccceeEeehHHHH-------HHHHHHHcCCCccCEEEEEccCCHH
Confidence            34445567899999999987765432    12 3456666655443       3444444444479999999998643

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=86.95  E-value=0.2  Score=37.00  Aligned_cols=33  Identities=27%  Similarity=0.448  Sum_probs=27.4

Q ss_pred             cEEEEEcCCChHHHH-----HHHHHHHcCCeEEEEecCh
Q 045749           64 SWALITGATDGIGKA-----FAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        64 k~vlITGassGiG~~-----~a~~l~~~G~~Vi~~~r~~   97 (210)
                      |++.|+| -||.|+.     +|..|+++|.+|.++|-+.
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~   39 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP   39 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence            4677887 8898886     4668999999999999875

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=86.93  E-value=0.35  Score=34.88  Aligned_cols=32  Identities=22%  Similarity=0.401  Sum_probs=26.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChh
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~   98 (210)
                      |+|.|| +--|...|.+|+++|.+|+++.++..
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            566665 46788999999999999999998753

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=86.83  E-value=0.97  Score=33.71  Aligned_cols=76  Identities=20%  Similarity=0.249  Sum_probs=51.0

Q ss_pred             cEEEEEc-CCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCccchhhHHHHHHHhcC
Q 045749           64 SWALITG-ATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVVSAGNIKAIEMAIDG  142 (210)
Q Consensus        64 k~vlITG-assGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  142 (210)
                      ..++=.| |||.||.+++.+.  ..++|+.+|.+++.++-+.+..+... -.++.+++.|+-+.             +.+
T Consensus       110 ~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~-~~~v~~~~~d~~~~-------------~~~  173 (274)
T d2b3ta1         110 CRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLA-IKNIHILQSDWFSA-------------LAG  173 (274)
T ss_dssp             CEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHT-CCSEEEECCSTTGG-------------GTT
T ss_pred             cceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhC-cccceeeecccccc-------------cCC
Confidence            3455555 5566777777654  35789999999999888777776553 23577776665432             112


Q ss_pred             CCccEEEEcCCCC
Q 045749          143 LEVGVLINNVGIT  155 (210)
Q Consensus       143 ~~id~lvnnAg~~  155 (210)
                      .++|++|.|--..
T Consensus       174 ~~fDlIvsNPPYi  186 (274)
T d2b3ta1         174 QQFAMIVSNPPYI  186 (274)
T ss_dssp             CCEEEEEECCCCB
T ss_pred             CceeEEEecchhh
Confidence            3799999997544

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=86.78  E-value=2.1  Score=28.77  Aligned_cols=44  Identities=16%  Similarity=0.249  Sum_probs=30.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc--CCeEEEE--ecChhHHHHHHHHH
Q 045749           64 SWALITGATDGIGKAFAHQLAQH--GLNLILV--SRNHNKLEKISNEI  107 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~--G~~Vi~~--~r~~~~l~~~~~~l  107 (210)
                      |.+.|-|++|.||.+...-..+.  .++|+..  .+|.+.+.+...+.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            57899999999999998877765  4666654  34455555544443

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.18  E-value=0.39  Score=32.81  Aligned_cols=31  Identities=19%  Similarity=0.141  Sum_probs=24.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVS   94 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~   94 (210)
                      ++.++|.|| |-+|.++|..|.+.|.++.++.
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence            567777766 7999999999999998755543

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.09  E-value=0.41  Score=35.79  Aligned_cols=30  Identities=23%  Similarity=0.491  Sum_probs=25.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      |+|.|| +..|...|.+++++|++|+++.+.
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            566655 778999999999999999999875

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.81  E-value=0.4  Score=35.43  Aligned_cols=32  Identities=22%  Similarity=0.385  Sum_probs=27.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChh
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~   98 (210)
                      |+|.||+ --|..+|..|+++|.+|+++.++++
T Consensus         5 V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           5 VAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             EEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            6777774 7899999999999999999998753

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.65  E-value=1.9  Score=30.80  Aligned_cols=58  Identities=16%  Similarity=0.062  Sum_probs=38.7

Q ss_pred             CcEEEEEcCCChHH-HHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEE
Q 045749           63 GSWALITGATDGIG-KAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEY  121 (210)
Q Consensus        63 gk~vlITGassGiG-~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~  121 (210)
                      .|.++=.|...|.. ..+|+.+ ..+.+|+.++.+++..+.+.+.++..+-..++.....
T Consensus        60 ~k~vLEiGt~~GyStl~~a~al-~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~G  118 (219)
T d2avda1          60 AKKALDLGTFTGYSALALALAL-PADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK  118 (219)
T ss_dssp             CCEEEEECCTTSHHHHHHHTTS-CTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred             CCeEEEEechhhHHHHHHHHhC-CCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEe
Confidence            56888888877664 3344444 3356999999999888777777766544444554443

>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: HPr kinase HprK C-terminal domain
domain: HPr kinase HprK C-terminal domain
species: Mycoplasma pneumoniae [TaxId: 2104]

Probab=85.58  E-value=0.28  Score=34.36  Aligned_cols=32  Identities=31%  Similarity=0.476  Sum_probs=26.1

Q ss_pred             ccCCcEEEEEcCCChHHHH-HHHHHHHcCCeEEE
Q 045749           60 KSYGSWALITGATDGIGKA-FAHQLAQHGLNLIL   92 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~-~a~~l~~~G~~Vi~   92 (210)
                      ...|+-++++|. ||.|++ +|.+|.++|+.++.
T Consensus        12 ~~~g~gvli~G~-sG~GKS~lal~l~~~G~~lva   44 (177)
T d1knxa2          12 EVFGVGVLLTGR-SGIGKSECALDLINKNHLFVG   44 (177)
T ss_dssp             EETTEEEEEEES-SSSSHHHHHHHHHTTTCEEEE
T ss_pred             EECCEEEEEEcC-CCCCHHHHHHHHHHcCCceec
Confidence            456888999965 789997 89999999998654

>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: HPr kinase HprK C-terminal domain
domain: HPr kinase HprK C-terminal domain
species: Staphylococcus xylosus [TaxId: 1288]

Probab=85.49  E-value=0.27  Score=34.19  Aligned_cols=31  Identities=45%  Similarity=0.701  Sum_probs=25.5

Q ss_pred             ccCCcEEEEEcCCChHHHH-HHHHHHHcCCeEE
Q 045749           60 KSYGSWALITGATDGIGKA-FAHQLAQHGLNLI   91 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~-~a~~l~~~G~~Vi   91 (210)
                      ...|+-++++|. ||.|++ +|.+|.++|+.++
T Consensus        12 ~~~g~gvli~G~-sg~GKS~la~~l~~~g~~li   43 (169)
T d1ko7a2          12 DVYGVGVLITGD-SGIGKSETALELIKRGHRLV   43 (169)
T ss_dssp             EETTEEEEEEES-TTSSHHHHHHHHHHTTCEEE
T ss_pred             EECCEEEEEEeC-CCCCHHHHHHHHHHcCCeEE
Confidence            456889999976 688996 8889999998754

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.10  E-value=5.8  Score=29.43  Aligned_cols=41  Identities=15%  Similarity=0.181  Sum_probs=28.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc-C-CeEEEEecChhHHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQH-G-LNLILVSRNHNKLEKISNE  106 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~-G-~~Vi~~~r~~~~l~~~~~~  106 (210)
                      -|.|+|.|+++|.   +++++.+. + .+|.++..+++-.+-..+.
T Consensus        81 pk~VLiiGgG~G~---~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~  123 (290)
T d1xj5a_          81 PKKVLVIGGGDGG---VLREVARHASIEQIDMCEIDKMVVDVSKQF  123 (290)
T ss_dssp             CCEEEEETCSSSH---HHHHHTTCTTCCEEEEEESCHHHHHHHHHH
T ss_pred             CcceEEecCCchH---HHHHHHhcccceeeEEecCCHHHHHHHHHh
Confidence            4679999988774   45566654 3 4799999998766655543

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.00  E-value=0.85  Score=33.69  Aligned_cols=59  Identities=10%  Similarity=0.093  Sum_probs=41.6

Q ss_pred             CCcEEEEEcCCC-hHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecc
Q 045749           62 YGSWALITGATD-GIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS  124 (210)
Q Consensus        62 ~gk~vlITGass-GiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~  124 (210)
                      .|++++-.||+. +++..+|    ++| ++|+.++.+++..+-+.+.++...-..++.++..|..
T Consensus       107 ~g~~VlD~~aG~G~~~l~~a----~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~  167 (260)
T d2frna1         107 PDELVVDMFAGIGHLSLPIA----VYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR  167 (260)
T ss_dssp             TTCEEEETTCTTTTTHHHHH----HHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT
T ss_pred             CccEEEECcceEcHHHHHHH----HhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchH
Confidence            488899888764 4455554    345 5899999999988877777765543456777776654

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=84.99  E-value=0.76  Score=32.70  Aligned_cols=59  Identities=15%  Similarity=0.204  Sum_probs=41.9

Q ss_pred             CcEEEEEcCCChH-HHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEE
Q 045749           63 GSWALITGATDGI-GKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEY  121 (210)
Q Consensus        63 gk~vlITGassGi-G~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~  121 (210)
                      +..+|=.|++.|- ...+++++...|++|+.+|.+++-++.+.+.+.+......+.....
T Consensus        40 ~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~   99 (225)
T d1im8a_          40 DSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCN   99 (225)
T ss_dssp             TCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECS
T ss_pred             CCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccc
Confidence            5678888877654 5666766666799999999999988888877765443334444433

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=84.75  E-value=0.45  Score=34.55  Aligned_cols=30  Identities=27%  Similarity=0.443  Sum_probs=25.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      |+|.|| |--|...|.+|+++|++|++..++
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           3 VAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            667776 566899999999999999999875

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=84.70  E-value=2.6  Score=30.13  Aligned_cols=81  Identities=14%  Similarity=0.101  Sum_probs=52.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHH-HcC----CeEEEEecChhHHHHHHHHHHhh----CCCceeEEEEEecccCccchhh
Q 045749           62 YGSWALITGATDGIGKAFAHQLA-QHG----LNLILVSRNHNKLEKISNEIQAE----NPNTQINIVEYDFSCDVVSAGN  132 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~-~~G----~~Vi~~~r~~~~l~~~~~~l~~~----~~~~~~~~~~~D~~~~~~~~~~  132 (210)
                      .|..||..|+++|--.++.-+++ ..|    .+|+.++++++-.+...+.+...    ..-.++.+...|..+..     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-----  154 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-----  154 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----
Confidence            37899999999998777766665 445    47999999987766655544321    11235666666654321     


Q ss_pred             HHHHHHHhcCCCccEEEEcCCC
Q 045749          133 IKAIEMAIDGLEVGVLINNVGI  154 (210)
Q Consensus       133 ~~~~~~~~~~~~id~lvnnAg~  154 (210)
                             ....+.|.++.+++.
T Consensus       155 -------~~~~~fD~Iiv~~a~  169 (223)
T d1r18a_         155 -------PPNAPYNAIHVGAAA  169 (223)
T ss_dssp             -------GGGCSEEEEEECSCB
T ss_pred             -------ccccceeeEEEEeec
Confidence                   011268888888875

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=84.60  E-value=3.3  Score=26.12  Aligned_cols=80  Identities=14%  Similarity=0.164  Sum_probs=50.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecccCcc-chhhHHHHHHHhc
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFSCDVV-SAGNIKAIEMAID  141 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~  141 (210)
                      ||+++|.--..-+-..+...|.+.|++|+..+.+.++.   .+.+++.  .  ...+-.|+.-+.. --+..+++.+..+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~a---l~~~~~~--~--~dliilD~~mp~~~G~e~~~~ir~~~~   73 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREA---VEKYKEL--K--PDIVTMDITMPEMNGIDAIKEIMKIDP   73 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHH---HHHHHHH--C--CSEEEEECSCGGGCHHHHHHHHHHHCT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHH---HHHHHhc--c--CCEEEEecCCCCCCHHHHHHHHHHhCC
Confidence            78899999999999999999999999988666654333   2333333  2  2345556654432 2344556665544


Q ss_pred             CCCccEEEEc
Q 045749          142 GLEVGVLINN  151 (210)
Q Consensus       142 ~~~id~lvnn  151 (210)
                      .  +-+++..
T Consensus        74 ~--~pvi~ls   81 (118)
T d1u0sy_          74 N--AKIIVCS   81 (118)
T ss_dssp             T--CCEEEEE
T ss_pred             C--CcEEEEE
Confidence            3  3355544

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.52  E-value=1.2  Score=30.05  Aligned_cols=34  Identities=21%  Similarity=0.229  Sum_probs=26.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHGLN-LILVSRN   96 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G~~-Vi~~~r~   96 (210)
                      .++.|+|.|| +-.|..+|..+.+.|++ |+++.|.
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeC
Confidence            3555666655 67888999999999987 7677775

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=84.46  E-value=0.54  Score=34.16  Aligned_cols=35  Identities=26%  Similarity=0.301  Sum_probs=27.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHH
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLE  101 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~  101 (210)
                      |+|.|| +.-|...|.+++++|.+|.++.+++.-..
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G~   41 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIGR   41 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCH
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCCC
Confidence            455555 56678889999999999999999865433

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.39  E-value=5.7  Score=29.60  Aligned_cols=42  Identities=21%  Similarity=0.232  Sum_probs=30.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecChhHHHHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQH--GLNLILVSRNHNKLEKISNEI  107 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~--G~~Vi~~~r~~~~l~~~~~~l  107 (210)
                      .|.|+|.|+++|   .+++++++.  ..+|.++..+++-.+-..+.+
T Consensus        90 pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~  133 (295)
T d1inla_          90 PKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARKYL  133 (295)
T ss_dssp             CCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHHHC
T ss_pred             CceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHHHH
Confidence            568999998877   456677664  357999999987666555443

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=84.18  E-value=0.75  Score=32.48  Aligned_cols=37  Identities=19%  Similarity=0.302  Sum_probs=30.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           59 LKSYGSWALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        59 ~~~~gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      ..++||.|+|.|++. -|-.+|.++++.+++++...|.
T Consensus        28 ~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             CCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESS
T ss_pred             CCCCCCEEEEECCCc-cHHHHHHHHHhhhccccccccc
Confidence            456799999998754 5899999999999998887765

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.92  E-value=0.74  Score=33.84  Aligned_cols=32  Identities=28%  Similarity=0.403  Sum_probs=25.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           64 SWALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        64 k~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      +.|+|.|| |=-|+..|.+|+++|++|++.-.+
T Consensus         6 ~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           6 GKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            34667765 455899999999999999998654

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=83.84  E-value=0.7  Score=32.26  Aligned_cols=37  Identities=19%  Similarity=0.287  Sum_probs=29.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNHNKLEKIS  104 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~  104 (210)
                      +.|.| .|-+|..+|.-++ +|++|+..|.++++.+++.
T Consensus         3 I~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           3 IAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             EEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHH
T ss_pred             EEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHHh
Confidence            34445 7899999998665 6999999999988766543

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.69  E-value=0.52  Score=33.40  Aligned_cols=31  Identities=29%  Similarity=0.325  Sum_probs=25.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      ++|.|| +--|...|.++++.|.+|+++++++
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            566676 4559999999999999999998753

>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: HPr kinase HprK C-terminal domain
domain: HPr kinase HprK C-terminal domain
species: Lactobacillus casei [TaxId: 1582]

Probab=83.68  E-value=0.48  Score=33.05  Aligned_cols=32  Identities=47%  Similarity=0.669  Sum_probs=25.4

Q ss_pred             ccCCcEEEEEcCCChHHHH-HHHHHHHcCCeEEE
Q 045749           60 KSYGSWALITGATDGIGKA-FAHQLAQHGLNLIL   92 (210)
Q Consensus        60 ~~~gk~vlITGassGiG~~-~a~~l~~~G~~Vi~   92 (210)
                      ...|+-++++|. ||.|++ +|.+|.++|+.++.
T Consensus        11 ~~~g~gvl~~G~-sG~GKStlal~l~~~g~~lv~   43 (176)
T d1kkma_          11 DIYGLGVLITGD-SGVGKSETALELVQRGHRLIA   43 (176)
T ss_dssp             EETTEEEEEECC-TTSCHHHHHHHHHHTTCEEEE
T ss_pred             EECCEEEEEEeC-CCCCHHHHHHHHHHcCCeEEe
Confidence            456889999955 788995 68899999997654

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.44  E-value=2.7  Score=31.09  Aligned_cols=59  Identities=14%  Similarity=0.164  Sum_probs=42.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEec
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQH-GLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDF  123 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~-G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~  123 (210)
                      .|..||=.|++-|   .++..++++ |++|+.++.+++..+.+.+.+++.+-...+.....|.
T Consensus        52 ~g~~VLDiGCG~G---~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~  111 (280)
T d2fk8a1          52 PGMTLLDIGCGWG---TTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW  111 (280)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG
T ss_pred             CCCEEEEecCCch---HHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhh
Confidence            3889999998866   345566654 9999999999999888877777654344455544443

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=82.66  E-value=5  Score=26.75  Aligned_cols=42  Identities=21%  Similarity=0.325  Sum_probs=29.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEe--cChhHHHHHH
Q 045749           63 GSWALITGATDGIGKAFAHQLAQH--GLNLILVS--RNHNKLEKIS  104 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~--G~~Vi~~~--r~~~~l~~~~  104 (210)
                      .|.+.|-|++|.||.+...-+.+.  .++|+..+  +|-+.+.+..
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~   47 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAA   47 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHH
Confidence            478999999999999998888664  56766543  3444444433

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=82.50  E-value=0.63  Score=33.97  Aligned_cols=30  Identities=30%  Similarity=0.533  Sum_probs=25.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      ++|.||+.+ |...|.++++.|.+|.++.++
T Consensus         4 viVIG~G~a-G~~aA~~aa~~G~~V~liE~~   33 (259)
T d1onfa1           4 LIVIGGGSG-GMAAARRAARHNAKVALVEKS   33 (259)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHH-HHHHHHHHHHCCCeEEEEecC
Confidence            566776544 999999999999999999986

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=82.50  E-value=0.62  Score=35.07  Aligned_cols=30  Identities=30%  Similarity=0.490  Sum_probs=25.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      |+|.|+ +.-|...|.+++++|++|+++.+.
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            555554 677999999999999999999875

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=82.50  E-value=0.74  Score=32.42  Aligned_cols=31  Identities=23%  Similarity=0.507  Sum_probs=24.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecCh
Q 045749           66 ALITGATDGIGKAFAHQLAQHGL-NLILVSRNH   97 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~-~Vi~~~r~~   97 (210)
                      |+|.|| |--|...|.+|+++|. +|++..++.
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           3 VIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             EEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            566665 5668899999999996 699998764

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.46  E-value=0.77  Score=34.56  Aligned_cols=30  Identities=20%  Similarity=0.225  Sum_probs=25.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      |+|.|| |--|.++|++|.++|.+|++..++
T Consensus        10 V~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~   39 (298)
T d1w4xa1          10 VLVVGA-GFSGLYALYRLRELGRSVHVIETA   39 (298)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-cHHHHHHHHHHHhCCCCEEEEEcC
Confidence            777776 466888999999999999999875

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.07  E-value=0.79  Score=34.12  Aligned_cols=30  Identities=27%  Similarity=0.438  Sum_probs=24.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      |+|.|| |=-|...|.+|+++|.+|+++.++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            456665 455899999999999999999764

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.82  E-value=0.71  Score=34.74  Aligned_cols=30  Identities=30%  Similarity=0.445  Sum_probs=25.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      |+|.|| +..|...|.+++++|++|+++.+.
T Consensus        22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          22 VLVVGA-GSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            556654 788999999999999999999874

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.44  E-value=3.4  Score=29.25  Aligned_cols=45  Identities=13%  Similarity=0.128  Sum_probs=34.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHh
Q 045749           62 YGSWALITGATDGIGKAFAHQLAQHG-LNLILVSRNHNKLEKISNEIQA  109 (210)
Q Consensus        62 ~gk~vlITGassGiG~~~a~~l~~~G-~~Vi~~~r~~~~l~~~~~~l~~  109 (210)
                      .|+.||=.|++.|+   .+..+++++ .+|+.++.+++-++.+.+....
T Consensus        53 ~g~~VLdIGcG~G~---~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~   98 (229)
T d1zx0a1          53 KGGRVLEVGFGMAI---AASKVQEAPIDEHWIIECNDGVFQRLRDWAPR   98 (229)
T ss_dssp             TCEEEEEECCTTSH---HHHHHHTSCEEEEEEEECCHHHHHHHHHHGGG
T ss_pred             CCCeEEEeeccchH---HHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhh
Confidence            47889999998884   556677664 6799999998887777665443

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.31  E-value=0.53  Score=32.53  Aligned_cols=33  Identities=27%  Similarity=0.233  Sum_probs=26.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           63 GSWALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        63 gk~vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      ++-++|.|| +-.|.+.|..+++.|.+|+++.+.
T Consensus         5 ~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           5 HSKLLILGS-GPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCceEEEEee
Confidence            456777776 457899999999999999999764

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.31  E-value=3.7  Score=30.49  Aligned_cols=60  Identities=10%  Similarity=0.079  Sum_probs=43.4

Q ss_pred             CCcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhCCCceeEEEEEecc
Q 045749           62 YGSWALITGATDG-IGKAFAHQLAQHGLNLILVSRNHNKLEKISNEIQAENPNTQINIVEYDFS  124 (210)
Q Consensus        62 ~gk~vlITGassG-iG~~~a~~l~~~G~~Vi~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D~~  124 (210)
                      .|..||=.|++-| ....+|+   +.|++|+.+..+++..+...+...+.+...++.+...|..
T Consensus        62 ~G~~VLDiGCG~G~~a~~~a~---~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~  122 (285)
T d1kpga_          62 PGMTLLDVGCGWGATMMRAVE---KYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE  122 (285)
T ss_dssp             TTCEEEEETCTTSHHHHHHHH---HHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG
T ss_pred             CCCEEEEecCcchHHHHHHHh---cCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhh
Confidence            4788999998755 4444444   3599999999999988877777766655566777766653

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=81.08  E-value=0.69  Score=35.12  Aligned_cols=30  Identities=20%  Similarity=0.375  Sum_probs=24.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      ++|.|++-| |..+|.+|++.|.+|+++-+.
T Consensus         7 viIVGsG~a-G~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           7 VVIVGSGPI-GCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEECcCHH-HHHHHHHHhhCCCeEEEEecC
Confidence            566666544 899999999999999999763

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=81.01  E-value=0.93  Score=31.74  Aligned_cols=30  Identities=23%  Similarity=0.276  Sum_probs=25.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      ++|.|| +-.|.+.|.++++.|.+|++++++
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            566666 566999999999999999999875

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.73  E-value=0.61  Score=33.25  Aligned_cols=30  Identities=23%  Similarity=0.355  Sum_probs=25.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRN   96 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~   96 (210)
                      ++|.||+.+ |...|.++++.|.+|.++.+.
T Consensus         6 viVIG~Gpa-Gl~aA~~aa~~G~kV~viE~~   35 (235)
T d1h6va1           6 LIIIGGGSG-GLAAAKEAAKFDKKVMVLDFV   35 (235)
T ss_dssp             EEEECCSHH-HHHHHHHHGGGCCCEEEECCC
T ss_pred             EEEECCCHH-HHHHHHHHHHCCCeEEEEecc
Confidence            567776544 999999999999999999854

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=80.36  E-value=0.85  Score=31.93  Aligned_cols=31  Identities=29%  Similarity=0.371  Sum_probs=25.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCh
Q 045749           66 ALITGATDGIGKAFAHQLAQHGLNLILVSRNH   97 (210)
Q Consensus        66 vlITGassGiG~~~a~~l~~~G~~Vi~~~r~~   97 (210)
                      ++|.|| +..|...|..+++.|.+|+++.+..
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~~   36 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKGN   36 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecCC
Confidence            556665 5569999999999999999998763

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.31  E-value=1.2  Score=29.53  Aligned_cols=36  Identities=17%  Similarity=0.202  Sum_probs=31.2

Q ss_pred             CcEEEEEcCC---ChHHHHHHHHHHHcCCeEEEEecChh
Q 045749           63 GSWALITGAT---DGIGKAFAHQLAQHGLNLILVSRNHN   98 (210)
Q Consensus        63 gk~vlITGas---sGiG~~~a~~l~~~G~~Vi~~~r~~~   98 (210)
                      -|.+.|.|+|   +..|..+++.|.+.|++|+.+..+.+
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~   57 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE   57 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccc
Confidence            5789999998   57999999999999999998876643