Query 045750
Match_columns 792
No_of_seqs 302 out of 3023
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 05:10:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045750.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045750hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202 Ca2+ transporting ATPa 100.0 8E-132 2E-136 1065.5 59.4 774 1-789 84-971 (972)
2 PRK10517 magnesium-transportin 100.0 2E-126 4E-131 1119.5 81.3 769 2-791 129-901 (902)
3 PRK15122 magnesium-transportin 100.0 1E-125 2E-130 1115.2 84.0 773 2-792 118-903 (903)
4 TIGR01524 ATPase-IIIB_Mg magne 100.0 2E-124 5E-129 1104.2 85.1 771 1-791 94-867 (867)
5 TIGR01523 ATPase-IID_K-Na pota 100.0 1E-122 3E-127 1100.6 82.2 770 1-789 87-1050(1053)
6 COG0474 MgtA Cation transport 100.0 2E-121 5E-126 1080.1 73.6 747 2-773 110-901 (917)
7 TIGR01106 ATPase-IIC_X-K sodiu 100.0 9E-120 2E-124 1080.8 79.9 772 2-792 111-991 (997)
8 TIGR01116 ATPase-IIA1_Ca sarco 100.0 8E-118 2E-122 1057.7 80.4 764 2-784 43-916 (917)
9 TIGR01522 ATPase-IIA2_Ca golgi 100.0 5E-117 1E-121 1049.0 84.3 750 3-786 88-882 (884)
10 TIGR01517 ATPase-IIB_Ca plasma 100.0 5E-115 1E-119 1038.1 78.0 744 4-783 137-938 (941)
11 KOG0204 Calcium transporting A 100.0 2E-117 3E-122 953.5 47.9 747 7-783 194-1005(1034)
12 TIGR01647 ATPase-IIIA_H plasma 100.0 5E-111 1E-115 978.4 76.1 681 1-745 61-753 (755)
13 KOG0203 Na+/K+ ATPase, alpha s 100.0 2E-114 5E-119 927.8 32.5 773 1-792 132-1013(1019)
14 TIGR01657 P-ATPase-V P-type AT 100.0 3E-104 6E-109 954.0 66.3 721 2-762 200-1047(1054)
15 TIGR01652 ATPase-Plipid phosph 100.0 2.1E-94 4.5E-99 871.5 58.8 743 2-787 58-1047(1057)
16 PLN03190 aminophospholipid tra 100.0 1.2E-89 2.7E-94 818.9 64.1 743 2-786 144-1141(1178)
17 KOG0205 Plasma membrane H+-tra 100.0 1.8E-90 3.9E-95 721.6 30.2 727 1-785 103-846 (942)
18 PRK14010 potassium-transportin 100.0 5.8E-87 1.3E-91 749.0 51.4 512 4-612 71-589 (673)
19 PRK01122 potassium-transportin 100.0 2.8E-85 6.1E-90 736.1 54.0 502 5-600 76-581 (679)
20 KOG0208 Cation transport ATPas 100.0 1.6E-83 3.6E-88 700.6 46.8 729 3-767 222-1102(1140)
21 TIGR01497 kdpB K+-transporting 100.0 8.3E-82 1.8E-86 706.1 52.1 507 5-603 77-585 (675)
22 COG2217 ZntA Cation transport 100.0 7.5E-81 1.6E-85 699.3 48.9 494 6-607 182-680 (713)
23 KOG0209 P-type ATPase [Inorgan 100.0 3.7E-77 8.1E-82 636.3 43.4 722 17-785 236-1149(1160)
24 KOG0210 P-type ATPase [Inorgan 100.0 4.6E-78 9.9E-83 631.8 32.4 734 2-787 136-1041(1051)
25 PRK11033 zntA zinc/cadmium/mer 100.0 9.2E-76 2E-80 680.6 51.5 493 3-607 214-709 (741)
26 TIGR01494 ATPase_P-type ATPase 100.0 8.4E-74 1.8E-78 644.7 53.3 475 1-608 2-483 (499)
27 KOG0206 P-type ATPase [General 100.0 3.3E-77 7.2E-82 685.7 23.1 746 1-787 87-1077(1151)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 5.4E-74 1.2E-78 651.7 46.4 499 2-607 25-528 (556)
29 TIGR01511 ATPase-IB1_Cu copper 100.0 8.9E-73 1.9E-77 638.9 51.3 479 9-607 68-547 (562)
30 KOG0207 Cation transport ATPas 100.0 2.3E-74 4.9E-79 630.1 33.3 496 9-605 352-864 (951)
31 TIGR01512 ATPase-IB2_Cd heavy 100.0 7.2E-72 1.6E-76 629.8 48.8 480 3-608 26-508 (536)
32 PRK10671 copA copper exporting 100.0 2.8E-71 6.1E-76 657.2 54.8 489 9-605 297-791 (834)
33 COG2216 KdpB High-affinity K+ 100.0 2.1E-60 4.5E-65 486.2 32.7 507 3-600 74-583 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1.1E-35 2.4E-40 301.8 20.4 224 2-240 3-230 (230)
35 KOG4383 Uncharacterized conser 99.9 1.1E-24 2.5E-29 229.2 21.5 431 355-790 698-1335(1354)
36 PF00702 Hydrolase: haloacid d 99.9 6.9E-24 1.5E-28 213.5 13.4 211 244-546 1-215 (215)
37 PF00689 Cation_ATPase_C: Cati 99.8 1E-19 2.2E-24 177.5 13.9 169 615-783 1-182 (182)
38 COG4087 Soluble P-type ATPase 99.6 1.4E-15 3.1E-20 128.8 11.0 124 427-577 19-145 (152)
39 PRK10513 sugar phosphate phosp 99.4 6.1E-12 1.3E-16 131.1 14.2 68 513-580 196-266 (270)
40 COG0561 Cof Predicted hydrolas 99.4 8.6E-12 1.9E-16 129.4 14.2 150 431-580 12-259 (264)
41 PRK15126 thiamin pyrimidine py 99.3 7.8E-12 1.7E-16 130.3 13.2 144 437-580 18-260 (272)
42 PRK01158 phosphoglycolate phos 99.3 1.4E-11 3.1E-16 125.1 14.4 143 438-580 20-227 (230)
43 PRK10976 putative hydrolase; P 99.3 1.4E-11 3.1E-16 128.0 13.9 68 513-580 190-262 (266)
44 TIGR01487 SPP-like sucrose-pho 99.3 1.8E-11 3.8E-16 122.8 11.6 141 438-578 18-215 (215)
45 PLN02887 hydrolase family prot 99.3 5.4E-11 1.2E-15 133.5 14.4 54 527-580 524-577 (580)
46 PF08282 Hydrolase_3: haloacid 99.3 7.3E-11 1.6E-15 121.7 14.4 143 436-578 13-254 (254)
47 TIGR01482 SPP-subfamily Sucros 99.2 7.9E-11 1.7E-15 119.2 13.0 142 438-579 15-222 (225)
48 PRK10530 pyridoxal phosphate ( 99.2 1.2E-10 2.7E-15 121.5 13.1 68 513-580 199-269 (272)
49 PRK11133 serB phosphoserine ph 99.2 2E-10 4.3E-15 120.6 13.3 128 438-579 181-316 (322)
50 TIGR02137 HSK-PSP phosphoserin 99.1 3.6E-10 7.9E-15 111.0 11.3 131 438-581 68-198 (203)
51 TIGR02726 phenyl_P_delta pheny 99.1 3.3E-10 7.1E-15 107.1 10.2 104 445-574 41-146 (169)
52 TIGR01486 HAD-SF-IIB-MPGP mann 99.1 2.2E-09 4.8E-14 110.7 14.9 142 439-580 17-254 (256)
53 TIGR00099 Cof-subfamily Cof su 99.1 1.3E-09 2.7E-14 112.6 12.5 66 513-578 188-256 (256)
54 PRK03669 mannosyl-3-phosphogly 99.1 2.3E-09 5E-14 111.5 14.5 143 438-580 24-266 (271)
55 PF13246 Hydrolase_like2: Puta 99.1 4.5E-10 9.7E-15 94.6 7.3 69 289-367 19-91 (91)
56 TIGR01670 YrbI-phosphatas 3-de 99.0 1.6E-09 3.5E-14 101.8 10.1 106 446-579 36-146 (154)
57 COG1778 Low specificity phosph 99.0 2.4E-09 5.1E-14 95.1 8.3 115 445-586 42-163 (170)
58 PRK00192 mannosyl-3-phosphogly 98.9 1.4E-08 3E-13 105.7 14.6 68 513-580 190-268 (273)
59 TIGR00338 serB phosphoserine p 98.9 6.1E-09 1.3E-13 104.9 10.9 126 438-577 85-218 (219)
60 COG0560 SerB Phosphoserine pho 98.9 7.5E-09 1.6E-13 102.1 10.8 111 437-566 76-199 (212)
61 PRK09484 3-deoxy-D-manno-octul 98.8 2.7E-08 5.8E-13 96.5 11.0 111 445-582 55-172 (183)
62 PRK08238 hypothetical protein; 98.8 4.5E-06 9.7E-11 92.6 27.8 100 438-558 72-171 (479)
63 TIGR02471 sucr_syn_bact_C sucr 98.8 7E-08 1.5E-12 98.2 12.5 68 513-580 159-233 (236)
64 PRK13582 thrH phosphoserine ph 98.7 1.5E-07 3.2E-12 93.7 11.5 126 438-579 68-196 (205)
65 TIGR01485 SPP_plant-cyano sucr 98.6 4E-07 8.7E-12 93.4 13.3 145 436-580 19-245 (249)
66 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.6 2.9E-07 6.2E-12 91.3 11.2 118 438-563 80-200 (201)
67 PLN02382 probable sucrose-phos 98.5 1.5E-06 3.3E-11 95.0 12.8 143 438-580 28-258 (413)
68 KOG1615 Phosphoserine phosphat 98.4 3.4E-07 7.4E-12 84.4 6.4 111 438-552 88-199 (227)
69 TIGR02461 osmo_MPG_phos mannos 98.4 1.6E-06 3.5E-11 87.0 10.5 43 436-478 13-55 (225)
70 PLN02954 phosphoserine phospha 98.4 3.6E-06 7.8E-11 85.0 13.1 127 438-576 84-221 (224)
71 PF12710 HAD: haloacid dehalog 98.4 1E-06 2.2E-11 86.6 8.7 92 441-543 92-192 (192)
72 TIGR03333 salvage_mtnX 2-hydro 98.4 3E-06 6.5E-11 84.7 11.6 131 437-579 69-209 (214)
73 PRK09552 mtnX 2-hydroxy-3-keto 98.3 4.8E-06 1E-10 83.6 10.9 135 438-578 74-212 (219)
74 TIGR02463 MPGP_rel mannosyl-3- 98.3 1E-05 2.3E-10 81.4 13.0 40 439-478 17-56 (221)
75 PRK10187 trehalose-6-phosphate 98.2 9.6E-06 2.1E-10 83.6 12.5 135 438-578 36-240 (266)
76 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.2 5.8E-06 1.3E-10 82.0 9.8 110 436-553 85-198 (202)
77 PRK13222 phosphoglycolate phos 98.2 9.7E-06 2.1E-10 81.9 10.9 126 437-581 92-224 (226)
78 TIGR01488 HAD-SF-IB Haloacid D 98.2 4.2E-06 9.1E-11 81.0 7.5 100 438-545 73-177 (177)
79 PRK12702 mannosyl-3-phosphogly 98.2 1.7E-05 3.8E-10 80.2 11.7 43 436-478 16-58 (302)
80 cd01427 HAD_like Haloacid deha 98.2 5.6E-06 1.2E-10 76.0 7.6 116 434-550 20-138 (139)
81 COG0546 Gph Predicted phosphat 98.1 2E-05 4.3E-10 79.1 11.8 124 436-578 87-217 (220)
82 TIGR01454 AHBA_synth_RP 3-amin 98.1 1.2E-05 2.6E-10 79.9 10.2 122 438-578 75-203 (205)
83 TIGR01489 DKMTPPase-SF 2,3-dik 98.1 9.8E-06 2.1E-10 79.3 8.9 112 437-550 71-186 (188)
84 PTZ00174 phosphomannomutase; P 98.1 1.7E-05 3.6E-10 81.2 10.2 53 512-565 187-244 (247)
85 PRK14502 bifunctional mannosyl 98.1 3.3E-05 7.2E-10 87.0 12.8 39 439-477 434-472 (694)
86 PRK13288 pyrophosphatase PpaX; 97.9 4.5E-05 9.7E-10 76.3 9.8 122 438-578 82-210 (214)
87 PRK13223 phosphoglycolate phos 97.9 6.2E-05 1.3E-09 78.1 10.6 124 437-579 100-230 (272)
88 TIGR01484 HAD-SF-IIB HAD-super 97.9 8.9E-05 1.9E-09 73.6 10.7 40 438-477 17-56 (204)
89 TIGR01449 PGP_bact 2-phosphogl 97.9 6.5E-05 1.4E-09 75.1 9.5 120 438-576 85-211 (213)
90 PRK14501 putative bifunctional 97.8 0.00039 8.5E-09 82.6 15.3 136 438-579 514-721 (726)
91 PF05116 S6PP: Sucrose-6F-phos 97.7 0.00018 4E-09 73.3 10.5 69 512-580 164-244 (247)
92 PRK10826 2-deoxyglucose-6-phos 97.7 0.00013 2.9E-09 73.4 8.8 119 437-574 91-215 (222)
93 TIGR01545 YfhB_g-proteo haloac 97.7 0.00019 4E-09 71.2 9.4 106 438-552 94-201 (210)
94 TIGR01422 phosphonatase phosph 97.7 0.00024 5.2E-09 73.1 10.6 95 438-548 99-196 (253)
95 PRK13225 phosphoglycolate phos 97.7 0.00042 9.1E-09 71.6 12.2 119 438-578 142-267 (273)
96 TIGR03351 PhnX-like phosphonat 97.7 0.00023 4.9E-09 71.6 9.9 122 437-576 86-217 (220)
97 PRK11590 hypothetical protein; 97.7 0.00044 9.5E-09 68.9 11.7 105 438-553 95-203 (211)
98 PRK13226 phosphoglycolate phos 97.6 0.00029 6.3E-09 71.2 10.1 122 438-578 95-224 (229)
99 TIGR01544 HAD-SF-IE haloacid d 97.6 0.00079 1.7E-08 68.6 12.4 137 436-578 119-273 (277)
100 PLN03243 haloacid dehalogenase 97.5 0.00054 1.2E-08 70.4 10.7 118 438-574 109-230 (260)
101 PRK11009 aphA acid phosphatase 97.5 0.00036 7.8E-09 69.8 8.8 91 437-551 113-210 (237)
102 PLN02770 haloacid dehalogenase 97.5 0.00055 1.2E-08 70.1 10.2 114 438-568 108-227 (248)
103 COG4030 Uncharacterized protei 97.5 0.00071 1.5E-08 64.3 9.7 141 438-579 83-262 (315)
104 smart00775 LNS2 LNS2 domain. T 97.4 0.00073 1.6E-08 63.5 9.3 103 436-548 25-141 (157)
105 PRK13478 phosphonoacetaldehyde 97.4 0.00092 2E-08 69.4 10.6 94 438-547 101-197 (267)
106 TIGR01672 AphA HAD superfamily 97.3 0.00052 1.1E-08 68.8 7.3 90 438-551 114-210 (237)
107 PRK06698 bifunctional 5'-methy 97.3 0.00094 2E-08 75.0 10.2 122 438-581 330-456 (459)
108 PRK11587 putative phosphatase; 97.3 0.0011 2.4E-08 66.4 9.7 112 438-566 83-197 (218)
109 PLN02575 haloacid dehalogenase 97.3 0.0015 3.2E-08 69.9 10.6 118 438-574 216-337 (381)
110 TIGR02253 CTE7 HAD superfamily 97.2 0.0012 2.6E-08 66.3 8.6 98 438-552 94-195 (221)
111 PRK06769 hypothetical protein; 97.2 0.0013 2.7E-08 63.2 8.2 98 438-552 28-137 (173)
112 PRK14988 GMP/IMP nucleotidase; 97.2 0.001 2.2E-08 66.8 7.6 99 437-554 92-196 (224)
113 TIGR01548 HAD-SF-IA-hyp1 haloa 97.1 0.00075 1.6E-08 66.5 6.1 92 436-545 104-197 (197)
114 TIGR01662 HAD-SF-IIIA HAD-supe 97.1 0.0031 6.7E-08 57.5 9.3 93 437-548 24-126 (132)
115 TIGR01428 HAD_type_II 2-haloal 97.0 0.0024 5.3E-08 62.9 8.2 95 438-549 92-188 (198)
116 PLN02580 trehalose-phosphatase 97.0 0.016 3.4E-07 62.1 14.7 63 513-579 301-374 (384)
117 PLN02779 haloacid dehalogenase 97.0 0.0031 6.7E-08 65.9 9.3 112 438-566 144-262 (286)
118 PRK08942 D,D-heptose 1,7-bisph 97.0 0.007 1.5E-07 58.6 11.1 127 438-578 29-176 (181)
119 PHA02530 pseT polynucleotide k 97.0 0.0026 5.6E-08 67.3 8.7 108 434-549 183-292 (300)
120 TIGR01685 MDP-1 magnesium-depe 96.9 0.0043 9.2E-08 59.1 9.0 114 427-551 34-155 (174)
121 TIGR01990 bPGM beta-phosphoglu 96.9 0.0016 3.5E-08 63.3 6.5 92 438-548 87-180 (185)
122 COG4359 Uncharacterized conser 96.9 0.0019 4.1E-08 59.6 6.1 107 438-552 73-185 (220)
123 PF13419 HAD_2: Haloacid dehal 96.9 0.0019 4E-08 61.9 6.0 97 436-549 75-173 (176)
124 TIGR00213 GmhB_yaeD D,D-heptos 96.8 0.0065 1.4E-07 58.6 9.2 128 439-574 27-174 (176)
125 TIGR02254 YjjG/YfnB HAD superf 96.7 0.0045 9.9E-08 62.2 8.0 119 438-576 97-222 (224)
126 TIGR01675 plant-AP plant acid 96.7 0.0099 2.2E-07 58.8 9.8 83 436-540 118-210 (229)
127 COG3769 Predicted hydrolase (H 96.7 0.0079 1.7E-07 57.3 8.3 37 442-478 27-63 (274)
128 TIGR00685 T6PP trehalose-phosp 96.7 0.0087 1.9E-07 61.1 9.6 64 511-578 165-239 (244)
129 TIGR02009 PGMB-YQAB-SF beta-ph 96.7 0.0039 8.5E-08 60.6 6.6 91 437-548 87-181 (185)
130 PLN02205 alpha,alpha-trehalose 96.6 0.026 5.6E-07 67.5 14.4 50 426-475 604-654 (854)
131 TIGR01509 HAD-SF-IA-v3 haloaci 96.6 0.0067 1.5E-07 58.7 8.0 93 438-548 85-179 (183)
132 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.6 0.02 4.4E-07 58.8 11.6 47 431-477 10-63 (257)
133 PRK09449 dUMP phosphatase; Pro 96.6 0.0087 1.9E-07 60.2 8.7 118 438-578 95-222 (224)
134 PLN02940 riboflavin kinase 96.6 0.0075 1.6E-07 65.7 8.7 112 438-566 93-210 (382)
135 TIGR01533 lipo_e_P4 5'-nucleot 96.4 0.019 4.1E-07 58.6 9.5 86 436-542 116-204 (266)
136 TIGR01656 Histidinol-ppas hist 96.3 0.0099 2.2E-07 55.3 6.8 97 438-549 27-141 (147)
137 TIGR01668 YqeG_hyp_ppase HAD s 96.3 0.011 2.5E-07 56.4 7.3 90 437-552 42-136 (170)
138 PLN02811 hydrolase 96.3 0.0097 2.1E-07 59.7 6.9 96 438-550 78-181 (220)
139 TIGR01261 hisB_Nterm histidino 96.2 0.0097 2.1E-07 56.2 6.2 98 438-550 29-144 (161)
140 smart00577 CPDc catalytic doma 96.2 0.006 1.3E-07 56.9 4.6 94 437-551 44-140 (148)
141 PRK10444 UMP phosphatase; Prov 96.2 0.035 7.6E-07 56.5 10.5 47 431-477 10-59 (248)
142 COG2179 Predicted hydrolase of 96.1 0.023 4.9E-07 52.1 7.5 110 390-547 20-132 (175)
143 PF08235 LNS2: LNS2 (Lipin/Ned 96.0 0.041 8.8E-07 50.9 9.0 103 436-548 25-141 (157)
144 PLN03017 trehalose-phosphatase 96.0 0.19 4.2E-06 53.4 15.2 48 426-474 119-168 (366)
145 PLN02423 phosphomannomutase 95.9 0.057 1.2E-06 55.0 10.4 44 512-557 188-236 (245)
146 TIGR01664 DNA-3'-Pase DNA 3'-p 95.9 0.019 4.2E-07 54.5 6.4 94 439-549 43-158 (166)
147 TIGR02252 DREG-2 REG-2-like, H 95.8 0.023 5.1E-07 56.1 7.1 93 438-548 105-200 (203)
148 TIGR01691 enolase-ppase 2,3-di 95.8 0.03 6.5E-07 55.7 7.6 99 436-551 93-194 (220)
149 TIGR01681 HAD-SF-IIIC HAD-supe 95.8 0.033 7.2E-07 50.4 7.3 93 438-544 29-126 (128)
150 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.7 0.073 1.6E-06 54.2 10.3 91 431-546 17-115 (242)
151 TIGR01549 HAD-SF-IA-v1 haloaci 95.6 0.029 6.4E-07 52.6 6.8 88 439-546 65-154 (154)
152 PLN02919 haloacid dehalogenase 95.3 0.073 1.6E-06 65.7 10.1 127 438-581 161-294 (1057)
153 PF13344 Hydrolase_6: Haloacid 95.3 0.062 1.3E-06 46.2 6.8 90 431-547 7-100 (101)
154 PRK05446 imidazole glycerol-ph 95.2 0.078 1.7E-06 56.5 8.6 99 437-550 29-145 (354)
155 PRK10563 6-phosphogluconate ph 95.1 0.027 5.7E-07 56.6 4.8 94 438-551 88-184 (221)
156 PHA02597 30.2 hypothetical pro 95.0 0.072 1.6E-06 52.3 7.6 99 438-554 74-176 (197)
157 PF09419 PGP_phosphatase: Mito 95.0 0.14 3.1E-06 48.1 8.8 90 436-551 57-163 (168)
158 TIGR02247 HAD-1A3-hyp Epoxide 94.9 0.043 9.3E-07 54.6 5.6 96 437-553 93-197 (211)
159 PF06888 Put_Phosphatase: Puta 94.9 0.12 2.5E-06 51.7 8.5 102 438-540 71-183 (234)
160 TIGR01457 HAD-SF-IIA-hyp2 HAD- 94.7 0.17 3.6E-06 51.8 9.6 48 431-478 10-60 (249)
161 PF03767 Acid_phosphat_B: HAD 94.7 0.039 8.5E-07 55.4 4.7 82 437-541 114-207 (229)
162 TIGR01686 FkbH FkbH-like domai 94.7 0.11 2.3E-06 55.4 8.2 91 438-552 31-129 (320)
163 KOG3120 Predicted haloacid deh 94.6 0.13 2.9E-06 49.3 7.6 115 438-552 84-209 (256)
164 PRK09456 ?-D-glucose-1-phospha 94.5 0.096 2.1E-06 51.5 7.0 91 438-549 84-181 (199)
165 TIGR01689 EcbF-BcbF capsule bi 93.9 0.058 1.3E-06 48.2 3.6 51 437-487 23-88 (126)
166 KOG3040 Predicted sugar phosph 93.9 0.21 4.5E-06 47.5 7.1 50 428-477 13-65 (262)
167 PLN02645 phosphoglycolate phos 93.8 0.16 3.5E-06 53.8 7.4 97 431-551 37-136 (311)
168 TIGR01680 Veg_Stor_Prot vegeta 93.6 0.46 1E-05 48.1 9.6 82 436-539 143-235 (275)
169 PRK10725 fructose-1-P/6-phosph 93.5 0.18 3.8E-06 49.1 6.5 90 440-548 90-181 (188)
170 PLN02151 trehalose-phosphatase 93.3 1.5 3.3E-05 46.5 13.4 63 513-579 269-342 (354)
171 TIGR01993 Pyr-5-nucltdase pyri 92.9 0.22 4.8E-06 48.2 6.1 96 438-549 84-181 (184)
172 COG0637 Predicted phosphatase/ 91.7 0.59 1.3E-05 46.8 7.6 99 436-551 84-184 (221)
173 COG3700 AphA Acid phosphatase 90.6 0.51 1.1E-05 43.6 5.3 90 439-551 115-210 (237)
174 TIGR01684 viral_ppase viral ph 90.3 0.55 1.2E-05 48.1 5.8 50 439-488 146-198 (301)
175 PF02358 Trehalose_PPase: Treh 89.8 2.2 4.8E-05 43.1 10.0 61 508-568 160-233 (235)
176 PLN02177 glycerol-3-phosphate 89.7 1.7 3.7E-05 48.8 9.7 98 439-553 111-215 (497)
177 PRK10517 magnesium-transportin 88.6 70 0.0015 39.3 27.1 78 7-95 131-209 (902)
178 PRK10748 flavin mononucleotide 88.4 1.1 2.4E-05 45.3 6.6 89 438-551 113-206 (238)
179 TIGR02251 HIF-SF_euk Dullard-l 88.3 0.36 7.9E-06 45.6 2.8 96 434-550 38-136 (162)
180 PRK15122 magnesium-transportin 88.0 76 0.0016 39.1 39.8 75 10-95 123-198 (903)
181 COG1011 Predicted hydrolase (H 85.9 4.4 9.6E-05 40.5 9.4 120 437-578 98-226 (229)
182 PF05822 UMPH-1: Pyrimidine 5' 85.5 0.71 1.5E-05 46.1 3.1 130 437-578 89-241 (246)
183 TIGR01452 PGP_euk phosphoglyco 85.5 4.6 9.9E-05 42.0 9.4 92 431-550 11-108 (279)
184 PHA03398 viral phosphatase sup 84.6 1.8 3.9E-05 44.5 5.5 41 439-479 148-189 (303)
185 COG2503 Predicted secreted aci 83.3 6.3 0.00014 38.9 8.3 86 438-544 122-211 (274)
186 COG1877 OtsB Trehalose-6-phosp 83.1 8.8 0.00019 39.2 9.8 128 433-560 35-236 (266)
187 TIGR01663 PNK-3'Pase polynucle 82.8 2 4.4E-05 48.5 5.7 40 439-478 198-249 (526)
188 TIGR01493 HAD-SF-IA-v2 Haloaci 81.8 1.5 3.2E-05 41.9 3.7 84 438-545 90-175 (175)
189 TIGR01522 ATPase-IIA2_Ca golgi 79.2 1.4E+02 0.003 36.8 20.2 204 7-222 95-306 (884)
190 COG0241 HisB Histidinol phosph 78.7 9.6 0.00021 36.4 7.8 99 438-548 31-144 (181)
191 PF13242 Hydrolase_like: HAD-h 77.8 3.9 8.4E-05 32.8 4.3 51 515-566 11-69 (75)
192 PTZ00445 p36-lilke protein; Pr 77.3 14 0.0003 36.1 8.5 142 383-551 28-204 (219)
193 PF06570 DUF1129: Protein of u 75.5 60 0.0013 31.9 12.9 9 768-776 185-193 (206)
194 TIGR02244 HAD-IG-Ncltidse HAD 74.1 11 0.00024 40.2 7.6 104 440-547 186-317 (343)
195 PLN03063 alpha,alpha-trehalose 73.2 62 0.0013 39.2 14.6 39 439-477 533-572 (797)
196 TIGR01647 ATPase-IIIA_H plasma 72.3 2.3E+02 0.0049 34.2 31.8 193 8-224 65-262 (755)
197 COG0647 NagD Predicted sugar p 71.3 4.5 9.8E-05 41.4 3.9 95 431-552 17-116 (269)
198 PRK14194 bifunctional 5,10-met 70.3 22 0.00048 37.0 8.6 132 435-567 12-208 (301)
199 PLN03190 aminophospholipid tra 68.5 59 0.0013 41.1 13.3 65 3-67 148-212 (1178)
200 TIGR01456 CECR5 HAD-superfamil 66.7 29 0.00064 36.8 9.1 48 431-478 9-64 (321)
201 TIGR01459 HAD-SF-IIA-hyp4 HAD- 65.6 6.7 0.00014 39.8 3.8 97 440-549 140-237 (242)
202 PF12689 Acid_PPase: Acid Phos 63.7 31 0.00067 32.7 7.5 99 438-551 45-147 (169)
203 CHL00200 trpA tryptophan synth 63.5 54 0.0012 33.6 9.9 99 435-554 125-233 (263)
204 PF00389 2-Hacid_dh: D-isomer 62.0 1.1E+02 0.0024 27.4 10.9 85 435-552 3-89 (133)
205 PF13380 CoA_binding_2: CoA bi 55.9 13 0.00029 32.7 3.5 40 439-478 64-104 (116)
206 PF00122 E1-E2_ATPase: E1-E2 A 55.7 59 0.0013 32.4 8.7 202 5-225 3-211 (230)
207 TIGR01460 HAD-SF-IIA Haloacid 55.6 23 0.0005 35.7 5.7 48 431-478 7-58 (236)
208 KOG3085 Predicted hydrolase (H 55.2 38 0.00083 33.9 6.9 104 439-562 114-223 (237)
209 TIGR01452 PGP_euk phosphoglyco 54.8 47 0.001 34.5 8.0 111 426-552 133-247 (279)
210 TIGR02250 FCP1_euk FCP1-like p 53.9 22 0.00048 33.2 4.8 43 436-479 56-98 (156)
211 PLN03064 alpha,alpha-trehalose 53.2 1.6E+02 0.0034 36.2 12.7 39 439-477 623-662 (934)
212 PRK02261 methylaspartate mutas 51.2 26 0.00056 31.9 4.7 82 391-478 25-114 (137)
213 PF06506 PrpR_N: Propionate ca 50.6 1.1E+02 0.0024 29.1 9.2 107 441-589 64-171 (176)
214 PF03419 Peptidase_U4: Sporula 50.5 2.7E+02 0.0059 29.0 12.9 25 763-787 127-151 (293)
215 PF03120 DNA_ligase_OB: NAD-de 49.7 7.8 0.00017 31.6 0.9 22 52-73 45-67 (82)
216 TIGR01657 P-ATPase-V P-type AT 49.6 97 0.0021 39.0 10.8 227 5-263 200-451 (1054)
217 PRK14179 bifunctional 5,10-met 49.0 90 0.0019 32.4 8.6 61 506-567 137-207 (284)
218 PRK14174 bifunctional 5,10-met 49.0 77 0.0017 33.0 8.2 43 435-477 9-61 (295)
219 TIGR00216 ispH_lytB (E)-4-hydr 48.7 1.3E+02 0.0028 31.1 9.7 142 384-552 100-262 (280)
220 cd00860 ThrRS_anticodon ThrRS 47.7 43 0.00093 27.5 5.2 55 433-487 7-62 (91)
221 PRK14169 bifunctional 5,10-met 47.6 1E+02 0.0022 31.9 8.7 43 436-478 10-61 (282)
222 KOG3128 Uncharacterized conser 47.5 75 0.0016 31.9 7.2 137 438-578 138-290 (298)
223 PRK14170 bifunctional 5,10-met 47.2 1.1E+02 0.0024 31.6 8.9 44 435-478 10-62 (284)
224 cd02071 MM_CoA_mut_B12_BD meth 47.1 18 0.00038 32.2 2.9 83 391-479 21-105 (122)
225 PLN02591 tryptophan synthase 46.6 1.6E+02 0.0034 30.0 9.9 99 437-554 114-220 (250)
226 PRK14189 bifunctional 5,10-met 46.1 99 0.0021 32.1 8.4 61 506-567 137-207 (285)
227 KOG2914 Predicted haloacid-hal 45.9 82 0.0018 31.3 7.5 97 439-551 93-194 (222)
228 PRK14184 bifunctional 5,10-met 45.7 1E+02 0.0022 32.0 8.4 43 436-478 10-62 (286)
229 PRK14182 bifunctional 5,10-met 45.1 1.4E+02 0.003 31.0 9.2 44 435-478 9-61 (282)
230 TIGR01501 MthylAspMutase methy 45.0 29 0.00064 31.4 3.9 83 391-479 23-113 (134)
231 cd05017 SIS_PGI_PMI_1 The memb 41.7 51 0.0011 29.0 5.0 38 438-477 54-91 (119)
232 COG1188 Ribosome-associated he 41.6 21 0.00046 30.1 2.3 24 46-70 39-62 (100)
233 PRK04302 triosephosphate isome 41.6 2.2E+02 0.0047 28.4 10.1 101 439-554 99-204 (223)
234 PRK14172 bifunctional 5,10-met 41.3 1.6E+02 0.0035 30.3 9.1 61 506-567 137-207 (278)
235 PF02254 TrkA_N: TrkA-N domain 41.2 1.8E+02 0.004 25.0 8.6 102 441-550 8-113 (116)
236 COG0474 MgtA Cation transport 41.1 1.4E+02 0.003 36.9 10.2 183 59-245 147-343 (917)
237 TIGR01524 ATPase-IIIB_Mg magne 41.1 2.3E+02 0.005 34.8 12.0 79 5-94 95-174 (867)
238 PLN02645 phosphoglycolate phos 41.0 56 0.0012 34.5 6.0 59 517-578 239-307 (311)
239 PF15584 Imm44: Immunity prote 39.0 14 0.0003 30.5 0.7 19 59-77 13-31 (94)
240 TIGR01517 ATPase-IIB_Ca plasma 38.7 1.1E+02 0.0023 38.0 8.8 79 3-82 140-221 (941)
241 PRK14188 bifunctional 5,10-met 38.4 4.9E+02 0.011 27.2 14.8 124 443-567 50-207 (296)
242 KOG0208 Cation transport ATPas 36.9 87 0.0019 37.7 6.9 227 5-265 221-473 (1140)
243 PF03129 HGTP_anticodon: Antic 36.2 57 0.0012 27.1 4.3 58 431-488 3-64 (94)
244 TIGR01652 ATPase-Plipid phosph 36.0 3.5E+02 0.0076 34.2 12.7 78 5-82 64-145 (1057)
245 PRK14175 bifunctional 5,10-met 35.1 61 0.0013 33.6 5.0 44 435-478 11-63 (286)
246 TIGR00262 trpA tryptophan synt 34.7 3.2E+02 0.007 27.9 10.1 100 434-554 120-229 (256)
247 TIGR02854 spore_II_GA sigma-E 34.3 5.6E+02 0.012 26.7 12.5 21 766-786 131-151 (288)
248 PLN02897 tetrahydrofolate dehy 33.8 2.7E+02 0.0058 29.7 9.4 45 433-477 62-116 (345)
249 PRK14178 bifunctional 5,10-met 33.4 1.9E+02 0.0041 29.9 8.1 62 506-568 131-202 (279)
250 PF06941 NT5C: 5' nucleotidase 33.3 37 0.0008 32.9 2.9 29 438-466 73-101 (191)
251 KOG2882 p-Nitrophenyl phosphat 33.2 64 0.0014 33.3 4.6 48 431-478 31-81 (306)
252 PRK14167 bifunctional 5,10-met 33.1 81 0.0018 32.9 5.5 44 435-478 10-62 (297)
253 PRK01045 ispH 4-hydroxy-3-meth 32.9 3.7E+02 0.0079 28.2 10.2 143 384-552 100-264 (298)
254 PF12710 HAD: haloacid dehalog 32.5 21 0.00047 34.2 1.1 13 247-259 1-13 (192)
255 cd04724 Tryptophan_synthase_al 32.4 1.6E+02 0.0034 29.8 7.4 41 437-477 112-155 (242)
256 PRK11507 ribosome-associated p 32.2 60 0.0013 25.6 3.3 22 46-67 42-63 (70)
257 PRK14190 bifunctional 5,10-met 32.1 83 0.0018 32.6 5.3 44 435-478 11-63 (284)
258 PRK14191 bifunctional 5,10-met 31.6 93 0.002 32.2 5.6 42 436-477 10-61 (285)
259 COG0279 GmhA Phosphoheptose is 31.6 1.2E+02 0.0027 28.3 5.7 33 440-472 122-154 (176)
260 PF01488 Shikimate_DH: Shikima 31.3 80 0.0017 28.6 4.6 34 442-475 23-56 (135)
261 COG3457 Predicted amino acid r 30.6 3E+02 0.0064 28.8 8.7 99 436-535 10-130 (353)
262 cd05014 SIS_Kpsf KpsF-like pro 30.5 36 0.00078 30.2 2.2 33 439-471 59-91 (128)
263 PF14336 DUF4392: Domain of un 29.6 1.9E+02 0.0042 30.1 7.7 42 437-478 59-101 (291)
264 TIGR02370 pyl_corrinoid methyl 29.3 32 0.0007 33.5 1.8 80 391-478 106-188 (197)
265 PRK13125 trpA tryptophan synth 29.2 3.8E+02 0.0082 27.0 9.6 35 441-475 116-152 (244)
266 PF13275 S4_2: S4 domain; PDB: 29.0 31 0.00068 26.7 1.2 24 46-70 38-61 (65)
267 cd05008 SIS_GlmS_GlmD_1 SIS (S 28.9 47 0.001 29.3 2.7 32 438-469 57-88 (126)
268 TIGR00676 fadh2 5,10-methylene 28.8 52 0.0011 34.0 3.3 41 426-466 58-99 (272)
269 PF00875 DNA_photolyase: DNA p 28.6 3.3E+02 0.0071 25.4 8.6 37 443-479 55-91 (165)
270 COG4229 Predicted enolase-phos 28.4 1.9E+02 0.004 27.6 6.3 93 435-547 100-198 (229)
271 KOG2367 Alpha-isopropylmalate 27.8 1.4E+02 0.0031 32.7 6.2 161 377-541 75-264 (560)
272 KOG3109 Haloacid dehalogenase- 27.6 2.7E+02 0.0059 27.5 7.4 107 431-550 92-202 (244)
273 PRK08433 flagellar motor switc 27.6 39 0.00083 29.4 1.7 26 50-75 38-63 (111)
274 PRK13111 trpA tryptophan synth 27.5 4.1E+02 0.0089 27.2 9.4 96 437-553 125-229 (258)
275 PRK14186 bifunctional 5,10-met 27.4 1.1E+02 0.0025 31.8 5.4 44 435-478 10-63 (297)
276 PRK15108 biotin synthase; Prov 27.1 6.4E+02 0.014 27.0 11.3 86 441-538 111-199 (345)
277 PF12791 RsgI_N: Anti-sigma fa 27.1 1E+02 0.0022 22.8 3.8 37 31-73 5-42 (56)
278 cd02072 Glm_B12_BD B12 binding 26.9 74 0.0016 28.5 3.4 81 392-478 22-110 (128)
279 PF12017 Tnp_P_element: Transp 26.7 90 0.002 31.3 4.4 38 442-479 197-234 (236)
280 cd00738 HGTP_anticodon HGTP an 26.7 1.2E+02 0.0025 25.0 4.6 50 438-487 15-65 (94)
281 PRK09529 bifunctional acetyl-C 26.3 3.8E+02 0.0082 31.2 9.4 141 441-585 149-295 (711)
282 PRK14185 bifunctional 5,10-met 26.0 1.4E+02 0.003 31.1 5.7 42 436-477 10-61 (293)
283 TIGR00559 pdxJ pyridoxine 5'-p 26.0 1.3E+02 0.0029 29.9 5.3 49 440-489 109-157 (237)
284 COG2194 Predicted membrane-ass 25.9 6E+02 0.013 29.3 11.2 23 758-780 115-137 (555)
285 cd00859 HisRS_anticodon HisRS 25.9 1.1E+02 0.0024 24.6 4.3 47 433-479 7-54 (91)
286 cd05710 SIS_1 A subgroup of th 25.7 56 0.0012 28.8 2.5 31 439-469 59-89 (120)
287 PRK15424 propionate catabolism 25.6 6.8E+02 0.015 28.7 11.7 79 442-547 95-174 (538)
288 PRK04980 hypothetical protein; 25.5 1.1E+02 0.0023 26.2 3.9 46 55-100 30-82 (102)
289 PRK14166 bifunctional 5,10-met 25.3 1.4E+02 0.003 30.9 5.6 43 436-478 10-61 (282)
290 cd00861 ProRS_anticodon_short 25.3 87 0.0019 25.9 3.5 51 438-488 15-66 (94)
291 PF01455 HupF_HypC: HupF/HypC 25.3 1.4E+02 0.003 23.5 4.2 25 46-70 24-51 (68)
292 TIGR01106 ATPase-IIC_X-K sodiu 24.9 2.5E+02 0.0053 35.2 8.7 36 59-94 148-184 (997)
293 PF03031 NIF: NLI interacting 24.4 87 0.0019 29.1 3.7 38 439-477 37-74 (159)
294 KOG0541 Alkyl hydroperoxide re 24.3 1.3E+02 0.0028 27.8 4.4 40 440-479 64-104 (171)
295 COG4996 Predicted phosphatase 24.1 1.7E+02 0.0036 26.2 4.9 44 436-479 39-82 (164)
296 PF11019 DUF2608: Protein of u 24.1 2E+02 0.0043 29.3 6.5 104 439-545 82-197 (252)
297 PRK14193 bifunctional 5,10-met 23.9 1.3E+02 0.0028 31.1 5.1 44 435-478 11-63 (284)
298 PRK14176 bifunctional 5,10-met 23.5 1.1E+02 0.0025 31.6 4.5 44 434-477 15-68 (287)
299 PRK10671 copA copper exporting 23.4 3.2E+02 0.007 33.4 9.2 36 59-94 330-366 (834)
300 PF09926 DUF2158: Uncharacteri 23.3 55 0.0012 24.2 1.6 13 58-70 2-14 (53)
301 PF08645 PNK3P: Polynucleotide 23.2 71 0.0015 29.9 2.8 24 440-463 31-54 (159)
302 PRK12360 4-hydroxy-3-methylbut 23.0 7.2E+02 0.016 25.8 10.2 142 384-552 103-263 (281)
303 PLN02389 biotin synthase 22.6 6.7E+02 0.014 27.3 10.4 86 440-537 152-240 (379)
304 KOG1618 Predicted phosphatase 22.6 3.8E+02 0.0082 28.1 7.8 48 431-478 44-99 (389)
305 PF14316 DUF4381: Domain of un 22.5 1.1E+02 0.0025 28.0 4.0 23 753-775 14-36 (146)
306 TIGR01494 ATPase_P-type ATPase 22.2 5.5E+02 0.012 29.1 10.3 74 4-93 2-76 (499)
307 cd05013 SIS_RpiR RpiR-like pro 22.1 5.4E+02 0.012 22.5 8.9 106 442-552 2-112 (139)
308 PRK11557 putative DNA-binding 21.7 5E+02 0.011 26.6 9.1 109 441-552 116-227 (278)
309 PF05240 APOBEC_C: APOBEC-like 21.4 1.2E+02 0.0027 22.6 3.1 25 440-464 1-25 (55)
310 PRK05265 pyridoxine 5'-phospha 21.0 1.4E+02 0.0031 29.7 4.4 47 440-487 112-158 (239)
311 TIGR02329 propionate_PrpR prop 20.9 1.2E+02 0.0026 34.7 4.5 46 441-490 132-177 (526)
312 PF01380 SIS: SIS domain SIS d 20.6 1E+02 0.0022 27.2 3.3 37 436-472 62-98 (131)
313 PRK14183 bifunctional 5,10-met 20.5 1.8E+02 0.004 30.0 5.3 43 436-478 10-62 (281)
314 cd05013 SIS_RpiR RpiR-like pro 20.3 1.8E+02 0.0039 25.7 4.9 28 441-468 74-101 (139)
315 cd04728 ThiG Thiazole synthase 20.2 5.1E+02 0.011 26.2 8.0 84 391-474 27-143 (248)
No 1
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-132 Score=1065.54 Aligned_cols=774 Identities=28% Similarity=0.427 Sum_probs=662.7
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
|.+++++++++++||||+++|++++|+++.|+.+.|+| +|+.+.+++++|||||||.++-||+||||.++++.
T Consensus 84 I~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R-------~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~ 156 (972)
T KOG0202|consen 84 ITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLR-------SGKLQHILARELVPGDIVELKVGDKIPADLRLIEA 156 (972)
T ss_pred eeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEe-------cCcccceehhccCCCCEEEEecCCccccceeEEee
Confidence 45778899999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCccccccccccc-CCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChH
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIRE-DHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDF 158 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~-~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~ 158 (792)
.++.||||+|||||.|+.|...... ++..+.-|++|++|+||.|..|.++|+|+.||.+|.+|++.+.++... +++|+
T Consensus 157 ~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPL 236 (972)
T KOG0202|consen 157 KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPL 236 (972)
T ss_pred eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcH
Confidence 9999999999999999999776655 566777899999999999999999999999999999999999887654 46889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh--hccc--------ccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhc
Q 045750 159 EKGVRRISFVLICVMLIVATIIILI--DYFT--------SKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARD 228 (792)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~ 228 (792)
|+.++.+...+.-++.+.++..+++ .++. ...+.+.+..++++.++++|++||.+++++++.|.+||+|+
T Consensus 237 qk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakk 316 (972)
T KOG0202|consen 237 QKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKK 316 (972)
T ss_pred HHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhh
Confidence 9999999877764444444443333 2222 25677889999999999999999999999999999999999
Q ss_pred CCccccchhhhcccceeEEEeccccccccCceEEEEeeCCCCC--------------------------------CcH--
Q 045750 229 RCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGF--------------------------------PKE-- 274 (792)
Q Consensus 229 ~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~--------------------------------~~~-- 274 (792)
+.+||++.++|+||.+++||+|||||||+|+|.+.+++..++. ..+
T Consensus 317 naIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l 396 (972)
T KOG0202|consen 317 NAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLL 396 (972)
T ss_pred hhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHH
Confidence 9999999999999999999999999999999999998744321 111
Q ss_pred -HHHHHHH-hh-cccc--CC-----CCCchHHHHHHHHHhcCccccc--cc---------------ceEeEEeCCCCCCC
Q 045750 275 -NVLRFAF-LN-SYYK--TD-----QKYPLDDAILAYVYTNGYRFQA--SK---------------WKKLDEIPFDFVRR 327 (792)
Q Consensus 275 -~~l~~a~-~~-~~~~--~~-----~~~p~~~al~~~~~~~~~~~~~--~~---------------~~~~~~~~f~~~~k 327 (792)
+++..++ || +..+ .. .|.|.|.||..++.+.|..... .. ++...++||+++||
T Consensus 397 ~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK 476 (972)
T KOG0202|consen 397 QELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRK 476 (972)
T ss_pred HHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccc
Confidence 2223332 22 1222 12 5799999999999988776522 22 34459999999999
Q ss_pred eEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEe
Q 045750 328 KVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKR 407 (792)
Q Consensus 328 ~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~ 407 (792)
+|++.+.+...+. ++.+|+|||+|.++++|+++...+++...|+++..|+.+.+...+++++|+||+++|+++
T Consensus 477 ~Msv~c~~~~~~~-------~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~ 549 (972)
T KOG0202|consen 477 SMSVKCSPAHGQS-------GYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKD 549 (972)
T ss_pred eEEEEEecCCCCc-------cceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccC
Confidence 9999998753222 689999999999999998886444457799999999999999999999999999999997
Q ss_pred cCCC----ccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC----
Q 045750 408 LLPQ----KSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT---- 479 (792)
Q Consensus 408 ~~~~----~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~---- 479 (792)
.+.. ....+...+...|.||+|+|++++.||||++++++|+.|+++||+|.|+|||+..||.+||+++|+..
T Consensus 550 ~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed 629 (972)
T KOG0202|consen 550 SPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED 629 (972)
T ss_pred CcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc
Confidence 6631 22233445678899999999999999999999999999999999999999999999999999999943
Q ss_pred --CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcH
Q 045750 480 --THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGAS 556 (792)
Q Consensus 480 --~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~ 556 (792)
...++|++++++++++.++...++.+|+|++|++|.+||+.||++| +.|+|+|||+||+|+||.||+||||| +|++
T Consensus 630 ~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~g-eivAMTGDGVNDApALK~AdIGIAMG~~GTd 708 (972)
T KOG0202|consen 630 VSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRG-EVVAMTGDGVNDAPALKKADIGIAMGISGTD 708 (972)
T ss_pred ccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcC-CEEEecCCCccchhhhhhcccceeecCCccH
Confidence 3679999999999999999999999999999999999999999999 99999999999999999999999999 9999
Q ss_pred HHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhh
Q 045750 557 VAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQI 635 (792)
Q Consensus 557 ~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~ 635 (792)
++|++||+|+.||||+.|+.++++||.+|.|+++++.|.++.|+.++.+.+++..+..+.|++|.|+||+|+++| +|+.
T Consensus 709 VaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~ 788 (972)
T KOG0202|consen 709 VAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPAT 788 (972)
T ss_pred hhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 7899
Q ss_pred hcccCCCCccccCCCCCCCCCCcc-hhhhhhhhHHHHHH-H-HHHHHHHHHhhhcccchH--------------------
Q 045750 636 AIPWDKMEGDYVKTPQIWSENGLP-MFILFNGPVCILCD-V-TALFFLWFYYEAYNQMNV-------------------- 692 (792)
Q Consensus 636 ~~~~~~~~~~~m~~p~~~~~~~l~-~~~~~~g~~~a~~~-~-~~~~~~~~~~~~~~~~~~-------------------- 692 (792)
+|+.+|+++|+|++|||.....++ ...++..+..+++. + ....|.||+...+...+.
T Consensus 789 aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~ 868 (972)
T KOG0202|consen 789 ALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAV 868 (972)
T ss_pred hcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhh
Confidence 999999999999999987654433 33333333222211 1 122233443322111110
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhcCCccccc--ccchHHHHHHHHHHHHHHHHhhhcc-ccccccccccChhHHHHH
Q 045750 693 ---VFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQ--EVASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTELPLTYFGFL 766 (792)
Q Consensus 693 ---~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~--~~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~l~~~~w~~~ 766 (792)
....|++|.++++..+++.++++++..+.|. +|.|.++.+++.+.+..+++++|+| ++..|+++++++..|+++
T Consensus 869 F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~v 948 (972)
T KOG0202|consen 869 FEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLV 948 (972)
T ss_pred hcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecCCcHHHHHHH
Confidence 0112667788999999999999998888766 4899999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 045750 767 LLLFIGYFTVGQLVKRIYILIYK 789 (792)
Q Consensus 767 l~~~~~~l~~~e~iK~~~~~~~~ 789 (792)
+.+.+.+++++|++|++.|++.+
T Consensus 949 l~~s~~V~i~dEilK~~~R~~~~ 971 (972)
T KOG0202|consen 949 LAISSPVIIVDEILKFIARNYFK 971 (972)
T ss_pred HHHhhhhhhHHHHHHHHHHhccC
Confidence 99999999999999999887754
No 2
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=2e-126 Score=1119.55 Aligned_cols=769 Identities=42% Similarity=0.709 Sum_probs=671.2
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
+++++++.+++++||+|+++++++|+++.+++++|+|++.. -.+|++++|+++||||||+|.+++||+|||||++++|+
T Consensus 129 ~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~-~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~ 207 (902)
T PRK10517 129 ALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVIND-KGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQAR 207 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCcc-CCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcC
Confidence 35678899999999999999999999999999999993110 00178999999999999999999999999999999998
Q ss_pred CeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHH
Q 045750 82 HLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEK 160 (792)
Q Consensus 82 ~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~ 160 (792)
++.||||+|||||.|+.|.+++..+...+..|++|++|+||.+.+|++.++|++||.+|++|++.+.+++. ++++++++
T Consensus 208 ~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~ 287 (902)
T PRK10517 208 DLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQ 287 (902)
T ss_pred ceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCCCCcHHH
Confidence 89999999999999999999876555667789999999999999999999999999999999999988764 45788999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhc
Q 045750 161 GVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240 (792)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~ 240 (792)
.+++++++++.++++++.+.++++++...+|.+++.+++++++++|||+||++++++++.++.+|+|+|+++|+++++|+
T Consensus 288 ~~~~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~ 367 (902)
T PRK10517 288 GISRVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQN 367 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhh
Confidence 99999998888888877777776666667889999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEe
Q 045750 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEI 320 (792)
Q Consensus 241 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~ 320 (792)
||++|++|||||||||+|+|.+.++....+.+.++++..+.+++..+...+||+|.|+++++...+.......++.++++
T Consensus 368 lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~ 447 (902)
T PRK10517 368 FGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEI 447 (902)
T ss_pred ccCCCEEEecCCCccccceEEEEEEecCCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEe
Confidence 99999999999999999999999986655556678888888777666678999999999998654422234568889999
Q ss_pred CCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCee
Q 045750 321 PFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRV 400 (792)
Q Consensus 321 ~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rv 400 (792)
||++++|+|+++++.. ++ .+.+++||+||.++++|+.. ..+|...+++++.++++.+..++++.+|+|+
T Consensus 448 pFds~~k~msvvv~~~--~~-------~~~~~~KGa~e~il~~c~~~--~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 516 (902)
T PRK10517 448 PFDFERRRMSVVVAEN--TE-------HHQLICKGALEEILNVCSQV--RHNGEIVPLDDIMLRRIKRVTDTLNRQGLRV 516 (902)
T ss_pred eeCCCcceEEEEEEEC--CC-------eEEEEEeCchHHHHHhchhh--hcCCCeecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 9999999999988753 22 57899999999999999977 4567778899999999999999999999999
Q ss_pred EEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q 045750 401 IGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT 480 (792)
Q Consensus 401 l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~ 480 (792)
+++||++++.++.. .....|+|++|+|+++++||+||+++++|++|+++||+++|+|||++.+|.++|+++||..+
T Consensus 517 lavA~k~~~~~~~~----~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~ 592 (902)
T PRK10517 517 VAVATKYLPAREGD----YQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG 592 (902)
T ss_pred EEEEEecCCccccc----cccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcc
Confidence 99999987543211 11124789999999999999999999999999999999999999999999999999999888
Q ss_pred ccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHh
Q 045750 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKD 560 (792)
Q Consensus 481 ~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~ 560 (792)
.+++|.+++.++++++.+.+.+..+|+|++|+||.++|+.+|++| ++|+|+|||.||+|||++||||||||+|+|.+|+
T Consensus 593 ~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G-~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAke 671 (902)
T PRK10517 593 EVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREG-HVVGFMGDGINDAPALRAADIGISVDGAVDIARE 671 (902)
T ss_pred CceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCC-CEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHH
Confidence 899999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhhhhhhhcccC
Q 045750 561 LADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWD 640 (792)
Q Consensus 561 ~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (792)
+||+|+++||+..|++++++||++|.|++|++.|.++.|+..+++.+++.++..+.|++|.|++|+|+++|++++++++|
T Consensus 672 aADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d 751 (902)
T PRK10517 672 AADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFD 751 (902)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCC
Confidence 99999999999999999999999999999999999999999999998888877778999999999999999999999999
Q ss_pred CCCccccCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 045750 641 KMEGDYVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEKIP 720 (792)
Q Consensus 641 ~~~~~~m~~p~~~~~~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~~ 720 (792)
++++++|++||+|+.+.+.+.+.+.|+.++++.+.+|+++++.++.........+++.+|.+++++|+++.+++|+++.+
T Consensus 752 ~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~~ 831 (902)
T PRK10517 752 NVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRIP 831 (902)
T ss_pred CCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHHhhccCCCC
Confidence 99999999999998888889899999998888888887776654321111112466778999999999999999998877
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhcc---ccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 045750 721 FIQEVASWPVLSSTLVISAIGIAIPFTA---IGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYILIYKKW 791 (792)
Q Consensus 721 ~~~~~~n~~l~~~~~~~~~l~~~~~~~p---l~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~~~~~ 791 (792)
+|+.+ +++.+++..++++++..|+| ++.+|++.++|+.++.|++.+.+.+.++.|+.|.++.|+|+ |
T Consensus 832 ~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~K~~~~~~~~-~ 901 (902)
T PRK10517 832 FIQSR---AAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFYSRRYG-W 901 (902)
T ss_pred cccch---HHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-C
Confidence 65544 44444444444444555544 89999999999544444444444444789999999999998 8
No 3
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.1e-125 Score=1115.25 Aligned_cols=773 Identities=43% Similarity=0.732 Sum_probs=674.4
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
+++++++.+++++||++++++.++|+++.+++++|+|++.. -.+|++++|+++||||||+|.+++||+|||||++++|+
T Consensus 118 ~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~-~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~ 196 (903)
T PRK15122 118 LTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHA-GAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESR 196 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCcc-CCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcC
Confidence 35667899999999999999999999999999999993210 00268999999999999999999999999999999999
Q ss_pred CeEEEeccccCCCcccccccc----------cccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcC
Q 045750 82 HLVVSQSSLTGESWTAEKTAD----------IREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGK 151 (792)
Q Consensus 82 ~~~Vdes~ltGEs~p~~k~~~----------~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~ 151 (792)
++.||||+|||||.|+.|.+. ...+...+..|++|++|+||.+.+|+++++|++||.+|++|++.+.+..
T Consensus 197 ~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~v~~ 276 (903)
T PRK15122 197 DLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVG 276 (903)
T ss_pred ceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHHhcC
Confidence 889999999999999999862 1122345667889999999999999999999999999999999998877
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCc
Q 045750 152 QKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCV 231 (792)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~ 231 (792)
++.++++++.++++...+..++++++.+.+++......+|.+++.+++++++++|||+||++++++++.++.+|+|+|++
T Consensus 277 ~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~il 356 (903)
T PRK15122 277 TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVV 356 (903)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCe
Confidence 66667899999999888777776666666666555567889999999999999999999999999999999999999999
Q ss_pred cccchhhhcccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCccccc
Q 045750 232 VKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQA 311 (792)
Q Consensus 232 vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~ 311 (792)
+|++.++|+||++|++|||||||||+|+|.+.++++..+.+.++++.++.+++..+...+||+|.|+++++.+.+.....
T Consensus 357 Vk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~ 436 (903)
T PRK15122 357 VKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKP 436 (903)
T ss_pred ecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhh
Confidence 99999999999999999999999999999999998766666677888877665445567899999999999876654334
Q ss_pred ccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHH
Q 045750 312 SKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGE 391 (792)
Q Consensus 312 ~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (792)
..++.++++||++.+|+|+++++.. ++ +++.++||+||.++++|++. ..+|...+++++.++++.+..+
T Consensus 437 ~~~~~~~~~pF~s~~k~ms~v~~~~--~~-------~~~~~~KGa~e~il~~c~~~--~~~~~~~~l~~~~~~~i~~~~~ 505 (903)
T PRK15122 437 AGYRKVDELPFDFVRRRLSVVVEDA--QG-------QHLLICKGAVEEMLAVATHV--RDGDTVRPLDEARRERLLALAE 505 (903)
T ss_pred hcCceEEEeeeCCCcCEEEEEEEcC--CC-------cEEEEECCcHHHHHHhchhh--hcCCCeecCCHHHHHHHHHHHH
Confidence 5688899999999999999998753 23 67899999999999999977 3567777899999999999999
Q ss_pred HHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 045750 392 ELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKI 471 (792)
Q Consensus 392 ~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~i 471 (792)
+++.+|+|++++||++++.++... ...+..|+|++|+|+++++||+||+++++|++||++||+++|+|||++.+|.++
T Consensus 506 ~~a~~G~rvlavA~k~~~~~~~~~--~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aI 583 (903)
T PRK15122 506 AYNADGFRVLLVATREIPGGESRA--QYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKI 583 (903)
T ss_pred HHHhCCCEEEEEEEeccCcccccc--ccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 999999999999999875432111 122346789999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 472 CHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 472 a~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
|+++||..+.+++|.+++.++++++.+...+..+|+|++|+||.++|+.+|++| ++|+|+|||.||+|||++|||||||
T Consensus 584 A~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G-~vVamtGDGvNDaPALk~ADVGIAm 662 (903)
T PRK15122 584 CREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANG-HTVGFLGDGINDAPALRDADVGISV 662 (903)
T ss_pred HHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCC-CEEEEECCCchhHHHHHhCCEEEEe
Confidence 999999878899999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred cCCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh
Q 045750 552 DSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS 631 (792)
Q Consensus 552 ~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 631 (792)
|+|+|.+|++||+|+++|||..|++++++||++|.|++|++.|.++.|+..+++.+++.++..+.|++|.|++|+|+++|
T Consensus 663 g~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D 742 (903)
T PRK15122 663 DSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYD 742 (903)
T ss_pred CcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988888887777778999999999999999
Q ss_pred hhhhhcccCCCCccccCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHH
Q 045750 632 VGQIAIPWDKMEGDYVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLII 711 (792)
Q Consensus 632 ~~~~~~~~~~~~~~~m~~p~~~~~~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~ 711 (792)
++++++++|++++++|++|++|+.+.+.+.+++.|+..+++.+.+|+++++.+..........++|.+|.+++++|+++.
T Consensus 743 ~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~~~q~~~~ 822 (903)
T PRK15122 743 ISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFVFAANSVEMQALFQSGWFIEGLLSQTLVV 822 (903)
T ss_pred HHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999995566677787888888888888888777776655543211100012357889999999999999
Q ss_pred HHHhcCCcccccccchHHHHHHHHHHHHHHHHhhhcc---ccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 045750 712 HLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIPFTA---IGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYILIY 788 (792)
Q Consensus 712 ~~~r~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p---l~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~~ 788 (792)
+++|+++.++|+. ++++.++++.+++++++.|+| ++.+|++.|+|+.+|++++.+++.++++.|+.|++++|++
T Consensus 823 ~~~R~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r~~ 899 (903)
T PRK15122 823 HMLRTQKIPFIQS---TAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRFYIRRF 899 (903)
T ss_pred HhhCcCCCCcCcc---hHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999988776653 344444555556666666666 7899999999999999999999999999999999999999
Q ss_pred ccCC
Q 045750 789 KKWL 792 (792)
Q Consensus 789 ~~~~ 792 (792)
++||
T Consensus 900 ~~~~ 903 (903)
T PRK15122 900 GQWF 903 (903)
T ss_pred cccC
Confidence 9997
No 4
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=2.1e-124 Score=1104.16 Aligned_cols=771 Identities=40% Similarity=0.708 Sum_probs=678.2
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
++++++++.+++++||+|++|+.++++++.+++++|+|.... -+||++++|+++||||||+|.+++||+|||||++++|
T Consensus 94 I~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~-~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g 172 (867)
T TIGR01524 94 IALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINE-NGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISA 172 (867)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEeccc-CCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEec
Confidence 356788999999999999999999999999999999992100 0058999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCCCCChHHH
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEK 160 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~~~~~~~~ 160 (792)
+++.||||+|||||.|+.|.+++....+.+..+++|++|+||.+.+|+++++|++||.+|.+|++.+.+.+++.++++++
T Consensus 173 ~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~t~lq~ 252 (867)
T TIGR01524 173 RDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAFDK 252 (867)
T ss_pred CceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCCCCcHHH
Confidence 88999999999999999999987655667788999999999999999999999999999999999998877666788999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhc
Q 045750 161 GVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240 (792)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~ 240 (792)
.+++++.+++.++++++.+.++++.+...+|.+++.+++++++++|||+||++++++++.++.+|+|+|+++|+++++|+
T Consensus 253 ~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~ 332 (867)
T TIGR01524 253 GVKSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQN 332 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhh
Confidence 99999998888888877777766655567888999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEe
Q 045750 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEI 320 (792)
Q Consensus 241 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~ 320 (792)
||++|++|||||||||+|+|++.++.+..+.+.++++..+++++..+...+||+|.|+++++...........++..+++
T Consensus 333 lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~ 412 (867)
T TIGR01524 333 FGAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEI 412 (867)
T ss_pred ccCccEEEecCCCccccCeEEEEEEecCCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEe
Confidence 99999999999999999999999997666666777888887776666667899999999998754333334577889999
Q ss_pred CCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCee
Q 045750 321 PFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRV 400 (792)
Q Consensus 321 ~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rv 400 (792)
||++++|+|+++++.+ ++ .++.++||+||.++++|+.+ ..+|...+++++.++++.+..++++.+|+|+
T Consensus 413 pF~s~~k~ms~~v~~~--~~-------~~~~~~KGa~e~il~~c~~~--~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 481 (867)
T TIGR01524 413 PFDFDRRRLSVVVENR--AE-------VTRLICKGAVEEMLTVCTHK--RFGGAVVTLSESEKSELQDMTAEMNRQGIRV 481 (867)
T ss_pred ccCCCcCEEEEEEEcC--Cc-------eEEEEEeCcHHHHHHhchhh--hcCCceecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 9999999999998753 22 46889999999999999977 4677778899998999999999999999999
Q ss_pred EEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q 045750 401 IGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT 480 (792)
Q Consensus 401 l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~ 480 (792)
+++||++++.++.. ..++.|+|++|+|+++++||+||+++++|++|+++||+++|+|||++.+|.++|+++||..+
T Consensus 482 lavA~~~~~~~~~~----~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~ 557 (867)
T TIGR01524 482 IAVATKTLKVGEAD----FTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN 557 (867)
T ss_pred EEEEEeccCccccc----ccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Confidence 99999987643221 11224789999999999999999999999999999999999999999999999999999888
Q ss_pred ccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHh
Q 045750 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKD 560 (792)
Q Consensus 481 ~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~ 560 (792)
.+++|.+++.++++++.+...+..+|+|++|+||.++|+.+|++| ++|+|+|||.||+|||++||||||||+|++.+|+
T Consensus 558 ~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G-~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~ 636 (867)
T TIGR01524 558 DFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAG-HTVGFLGDGINDAPALRKADVGISVDTAADIAKE 636 (867)
T ss_pred CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCC-CEEEEECCCcccHHHHHhCCEEEEeCCccHHHHH
Confidence 899999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhhhhhhhcccC
Q 045750 561 LADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWD 640 (792)
Q Consensus 561 ~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 640 (792)
+||+|+++|||..|++++++||++|.|+++++.|.++.|+..+++.+++.++..+.|++|.|++|+|+++|++++++++|
T Consensus 637 aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~ 716 (867)
T TIGR01524 637 ASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWD 716 (867)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999888888877778999999999999999999999999
Q ss_pred CCCccccCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 045750 641 KMEGDYVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEKIP 720 (792)
Q Consensus 641 ~~~~~~m~~p~~~~~~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~~ 720 (792)
++++++|++||+|+.+.+.+.+++.|+..+++.+.+|+++++.+..........++|.+|.+++++|+++.+++|+++.+
T Consensus 717 ~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~~ 796 (867)
T TIGR01524 717 KMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTEKIP 796 (867)
T ss_pred CCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcCCCC
Confidence 99999999999998888888899999988887777776655443211111133468899999999999999999998766
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhcc-c--cccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 045750 721 FIQEVASWPVLSSTLVISAIGIAIPFTA-I--GDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYILIYKKW 791 (792)
Q Consensus 721 ~~~~~~n~~l~~~~~~~~~l~~~~~~~p-l--~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~~~~~ 791 (792)
+|+ |++++.++++.+++++++.|+| + +.+|++.|+|+.++.|++.+.+.+.++.|+.|+++.|+++.|
T Consensus 797 ~~~---n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~~~ 867 (867)
T TIGR01524 797 FIQ---SRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYMATMQLVKTFYIRRFGEW 867 (867)
T ss_pred cCc---chHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 654 6677777777777777888887 3 889999998766544444444445588999999999999988
No 5
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.3e-122 Score=1100.60 Aligned_cols=770 Identities=25% Similarity=0.389 Sum_probs=654.4
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
|+++++++++++++||++++|++++|+++.+++++|+| ||++++|+++||||||||.+++||+|||||+++++
T Consensus 87 Il~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViR-------dg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~ 159 (1053)
T TIGR01523 87 ISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIR-------NGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIET 159 (1053)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEe-------CCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEe
Confidence 35678899999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCccccccccccc--CCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-----
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIRE--DHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK----- 153 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~--~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~----- 153 (792)
+++.||||+|||||.|+.|.+.... +.+.+..|+.|++|+||.|.+|++.++|++||.+|..|++.+.+...+
T Consensus 160 ~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~ 239 (1053)
T TIGR01523 160 KNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQR 239 (1053)
T ss_pred CceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcccc
Confidence 9999999999999999999875332 234556788999999999999999999999999999999998774321
Q ss_pred -------------------------------CCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHH
Q 045750 154 -------------------------------PPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVA 202 (792)
Q Consensus 154 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 202 (792)
.++++++.++++..++..++++++++++++..+ ..+.+.+.++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~--~~~~~~~~~av~l~ 317 (1053)
T TIGR01523 240 PEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF--DVDKEVAIYAICLA 317 (1053)
T ss_pred ccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhHHHHHHHHHHH
Confidence 137899999999998888777777766655432 22357778889999
Q ss_pred HHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhcccceeEEEeccccccccCceEEEEeeCCC-----------CC
Q 045750 203 CALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSW-----------GF 271 (792)
Q Consensus 203 ~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~-----------~~ 271 (792)
++++|++||++++++++.++.+|+|++++||++.++|+||++++||+|||||||+|+|++.+++... ++
T Consensus 318 Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~ 397 (1053)
T TIGR01523 318 ISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAF 397 (1053)
T ss_pred HHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999875321 00
Q ss_pred -----------------------------------------Cc-------HHHHHHHHhhcc--cc--------CCCCCc
Q 045750 272 -----------------------------------------PK-------ENVLRFAFLNSY--YK--------TDQKYP 293 (792)
Q Consensus 272 -----------------------------------------~~-------~~~l~~a~~~~~--~~--------~~~~~p 293 (792)
.. .+++..+.+++. .. ...+||
T Consensus 398 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~Gdp 477 (1053)
T TIGR01523 398 NPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDP 477 (1053)
T ss_pred CCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCc
Confidence 00 124444443322 11 124799
Q ss_pred hHHHHHHHHHhcCccc---------------------------ccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCC
Q 045750 294 LDDAILAYVYTNGYRF---------------------------QASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQF 346 (792)
Q Consensus 294 ~~~al~~~~~~~~~~~---------------------------~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~ 346 (792)
+|.|+++++.+.|.+. ....|+.++++||+|+||||+++++.+. ++
T Consensus 478 tE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~-~~------ 550 (1053)
T TIGR01523 478 TEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNH-GE------ 550 (1053)
T ss_pred cHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCC-CC------
Confidence 9999999998777531 0235788999999999999999998541 11
Q ss_pred CceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccC-----CCCCC
Q 045750 347 SGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQS-----NRNDG 421 (792)
Q Consensus 347 ~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~-----~~~~~ 421 (792)
.+++++|||||.|+++|+.....+++...+++++.++++.+..++++++|+||+++|||.+++++.... ...++
T Consensus 551 -~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~ 629 (1053)
T TIGR01523 551 -TYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRA 629 (1053)
T ss_pred -EEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchh
Confidence 478999999999999998763222225678999999999999999999999999999999865322110 11234
Q ss_pred CCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC------------Cccccchhhh
Q 045750 422 PIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT------------THVSTGPDLE 489 (792)
Q Consensus 422 ~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~------------~~~~~g~~~~ 489 (792)
.+|+|++|+|+++++||+||+++++|++||++||+++|+|||++.+|.++|+++||.. ..+++|.+++
T Consensus 630 ~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~ 709 (1053)
T TIGR01523 630 TAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD 709 (1053)
T ss_pred hhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhh
Confidence 5789999999999999999999999999999999999999999999999999999953 3689999999
Q ss_pred ccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEecc
Q 045750 490 LLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLE 568 (792)
Q Consensus 490 ~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~ 568 (792)
.++++++++...+..||||++|+||.++|+.+|+.| ++|+|+|||.||+|||++|||||||| +|++.++++||+++.+
T Consensus 710 ~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g-~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~d 788 (1053)
T TIGR01523 710 ALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRK-AFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSD 788 (1053)
T ss_pred hcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcC-CeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEec
Confidence 999999999999999999999999999999999999 99999999999999999999999999 8999999999999999
Q ss_pred CCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCchHHHHHHHHHHhh-hhhhhcccCCC
Q 045750 569 KDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFL-----QTDPLTPKQLLTQNFLYS-VGQIAIPWDKM 642 (792)
Q Consensus 569 ~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~ 642 (792)
++|..|.+++++||++|.|+++++.|.++.|+..+++.+++.++. .+.||+|+|++|+|+++| +|++++++|++
T Consensus 789 d~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~ 868 (1053)
T TIGR01523 789 DNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKA 868 (1053)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 999999999999999999999999999999999998888877763 247899999999999999 89999999999
Q ss_pred CccccCCCCCCCCCCcch-----hhhhhhhHHHHHHHHHHHHHHHHhhhc---cc---------chHHHHHHHHHHHHHH
Q 045750 643 EGDYVKTPQIWSENGLPM-----FILFNGPVCILCDVTALFFLWFYYEAY---NQ---------MNVVFFRSAWFVEGLL 705 (792)
Q Consensus 643 ~~~~m~~p~~~~~~~l~~-----~~~~~g~~~a~~~~~~~~~~~~~~~~~---~~---------~~~~~~~t~~f~~lv~ 705 (792)
++++|++||+++...++. .+.+.|++.++.++++|++.++.+... .. .+...++|++|.++++
T Consensus 869 ~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~ 948 (1053)
T TIGR01523 869 APDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTF 948 (1053)
T ss_pred ChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHH
Confidence 999999999876544433 455667777766666665443322100 00 1245689999999999
Q ss_pred HHHHHHHHHhcCCccccc-----------------ccchHHHHHHHHHHHHHHHHhhhcc-ccc-cccccccChhHHHHH
Q 045750 706 MQTLIIHLIRTEKIPFIQ-----------------EVASWPVLSSTLVISAIGIAIPFTA-IGD-VMGFTELPLTYFGFL 766 (792)
Q Consensus 706 ~q~~~~~~~r~~~~~~~~-----------------~~~n~~l~~~~~~~~~l~~~~~~~p-l~~-~f~~~~l~~~~w~~~ 766 (792)
+|+++.+++|+++.++|+ .+.|+++++++++.++++++++|+| ++. +|++.|+++ .|+++
T Consensus 949 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~ 1027 (1053)
T TIGR01523 949 CALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLA 1027 (1053)
T ss_pred HHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHH
Confidence 999999999998877653 2578999999999999999999999 986 999999997 68888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 045750 767 LLLFIGYFTVGQLVKRIYILIYK 789 (792)
Q Consensus 767 l~~~~~~l~~~e~iK~~~~~~~~ 789 (792)
++++++.+++.|+.|++.||+.+
T Consensus 1028 ~~~~~~~~~~~e~~K~~~r~~~~ 1050 (1053)
T TIGR01523 1028 AAATIAFFFGAEIWKCGKRRLFK 1050 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 88999999999999988776654
No 6
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-121 Score=1080.11 Aligned_cols=747 Identities=33% Similarity=0.507 Sum_probs=655.9
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
+++++++++++++||+++++++++++++.+++++|+| ||++++|+++||||||||.+++||+||||+++++++
T Consensus 110 ~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R-------~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~ 182 (917)
T COG0474 110 LLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLR-------DGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESS 182 (917)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEe-------CCcEEEecHHHCCCCcEEEECCCCccccceEEEEec
Confidence 3467889999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CeEEEeccccCCCcccccccccccCCCCCCC-cccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHH
Q 045750 82 HLVVSQSSLTGESWTAEKTADIREDHCTPLL-DLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFE 159 (792)
Q Consensus 82 ~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~-~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~ 159 (792)
+++||||+|||||.|+.|.+......+.+.- |+.|++|+||.+.+|++.|+|++||.+|+.|++...+... ...++++
T Consensus 183 ~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~ 262 (917)
T COG0474 183 DLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQ 262 (917)
T ss_pred CceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHH
Confidence 9999999999999999999876655555565 8999999999999999999999999999999999999887 6788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccc-hhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhh
Q 045750 160 KGVRRISFVLICVMLIVATIIILIDYFTSKN-LSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAI 238 (792)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~ 238 (792)
+.++++..+++.++++++++.+++..+.+.. |.+++.++++++++++|++||+.++++++.++.+|+|+++++|+++++
T Consensus 263 ~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~av 342 (917)
T COG0474 263 RKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAI 342 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchh
Confidence 9999999999999999998888888776455 899999999999999999999999999999999999999999999999
Q ss_pred hcccceeEEEeccccccccCceEEEEeeCCC-CCCcH-----------HHHHHHHhhccccCC------CCCchHHHHHH
Q 045750 239 RDMGTMDILCIDKTGTLTMDRAIMVNHLDSW-GFPKE-----------NVLRFAFLNSYYKTD------QKYPLDDAILA 300 (792)
Q Consensus 239 e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~-~~~~~-----------~~l~~a~~~~~~~~~------~~~p~~~al~~ 300 (792)
|+||++|+||+|||||||+|+|++.+++..+ +.+.+ +++..+++++..... .+||+|.|+++
T Consensus 343 E~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~ 422 (917)
T COG0474 343 ETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVE 422 (917)
T ss_pred hhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHH
Confidence 9999999999999999999999999998874 22111 133333333333332 78999999999
Q ss_pred HHHhcCc--cc--ccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcc
Q 045750 301 YVYTNGY--RF--QASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPIT 376 (792)
Q Consensus 301 ~~~~~~~--~~--~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~ 376 (792)
++.+.|. .. ....+++++++||+|+||||+++++.+ ++ ++++++|||||.|+++|+.. ++..
T Consensus 423 ~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~--~~-------~~~~~~KGApe~il~~~~~~-----~~~~ 488 (917)
T COG0474 423 FAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTD--EG-------KYILFVKGAPEVILERCKSI-----GELE 488 (917)
T ss_pred HHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcC--CC-------cEEEEEcCChHHHHHHhccc-----Cccc
Confidence 9988776 33 344567799999999999999999843 23 58999999999999999865 6677
Q ss_pred cCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCe
Q 045750 377 SFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVK 456 (792)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~ 456 (792)
+++++.++.+++..++++++|+||+++|||..+.++..... +++|+|++|+|+++++||||++++++|+.|+++||+
T Consensus 489 ~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~---~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~ 565 (917)
T COG0474 489 PLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEV---DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIK 565 (917)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchh---hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCc
Confidence 89999999999999999999999999999976544322221 779999999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHhCCCCCc----cccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEE
Q 045750 457 AKLLTGDSLSLAIKICHEVGIRTTH----VSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFL 532 (792)
Q Consensus 457 v~~~Tgd~~~~a~~ia~~~gi~~~~----~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~i 532 (792)
++|+|||+..||.++|+++|+..+. +++|.++..+.++++.+.+.+..||||++|+||.++|+.+|+.| ++|+|+
T Consensus 566 v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g-~vVamt 644 (917)
T COG0474 566 VWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSG-HVVAMT 644 (917)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCC-CEEEEe
Confidence 9999999999999999999996654 99999999999999999999999999999999999999999999 999999
Q ss_pred cCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 045750 533 GDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATM 611 (792)
Q Consensus 533 GDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~ 611 (792)
|||.||+||||+|||||||+ +|+|++|++||+++.++++..+..+++|||++|.|+++++.|.++.|+..+++.+++.+
T Consensus 645 GDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~ 724 (917)
T COG0474 645 GDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSL 724 (917)
T ss_pred CCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 79999999999999999999999999999999999999999999999998888888877
Q ss_pred HhcC-CCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCCCCCCC------CcchhhhhhhhHHHHHHHHHHHHHHHH
Q 045750 612 FLQT-DPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQIWSEN------GLPMFILFNGPVCILCDVTALFFLWFY 683 (792)
Q Consensus 612 ~~~~-~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~~~~~~------~l~~~~~~~g~~~a~~~~~~~~~~~~~ 683 (792)
+..+ .|+++.|++|+|++++ +|+++++.++++.+.|++||+.... .+++.+++.|+..+++.+++|.+.++.
T Consensus 725 ~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~ 804 (917)
T COG0474 725 FNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLG 804 (917)
T ss_pred HhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7666 8999999999999999 6899999999999999988654433 333445555666666666665555443
Q ss_pred hhhcc-cc--hHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc--cchHHHHHHHHHHHHHHHHhhhcc-cc-cccccc
Q 045750 684 YEAYN-QM--NVVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQE--VASWPVLSSTLVISAIGIAIPFTA-IG-DVMGFT 756 (792)
Q Consensus 684 ~~~~~-~~--~~~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~~--~~n~~l~~~~~~~~~l~~~~~~~p-l~-~~f~~~ 756 (792)
..... +. .....+|++|..++++|.++.+.+|+.+.+++.. +.|+.+++++++...++++..|.| .. ..|...
T Consensus 805 ~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~ 884 (917)
T COG0474 805 FIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPT 884 (917)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCC
Confidence 32211 11 2567899999999999999999999998888886 489999999999999999999998 66 789999
Q ss_pred ccChhHHHHHHHHHHHH
Q 045750 757 ELPLTYFGFLLLLFIGY 773 (792)
Q Consensus 757 ~l~~~~w~~~l~~~~~~ 773 (792)
+++...|+..++.....
T Consensus 885 ~~~~~~~~~~~~~~~~~ 901 (917)
T COG0474 885 PLSLFEWLIAIAVALLL 901 (917)
T ss_pred CCcHHHHHHHHHHHHHH
Confidence 99977788777666333
No 7
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=9.2e-120 Score=1080.82 Aligned_cols=772 Identities=26% Similarity=0.364 Sum_probs=661.6
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
+++++++++++++||+|+++++++++++.+++++|+| ||++++|+++||||||+|.+++||+|||||++++|+
T Consensus 111 ~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViR-------dg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~ 183 (997)
T TIGR01106 111 SAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIR-------DGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQ 183 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEE-------CCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEcc
Confidence 3466788999999999999999999999999999999 999999999999999999999999999999999998
Q ss_pred CeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHH
Q 045750 82 HLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEK 160 (792)
Q Consensus 82 ~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~ 160 (792)
++.||||+|||||.|+.|.+++. ....++.+|++|+||.+.+|++.++|++||.+|.+|++.+.+++. .+++++++
T Consensus 184 ~l~VdeS~LTGES~pv~K~~~~~---~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~ 260 (997)
T TIGR01106 184 GCKVDNSSLTGESEPQTRSPEFT---HENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPIAI 260 (997)
T ss_pred CcEEEccccCCCCCceeccCCCc---ccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCcHHH
Confidence 88999999999999999988743 234558899999999999999999999999999999999877653 34578999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhc
Q 045750 161 GVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240 (792)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~ 240 (792)
.++++...++.+++++++++++++...+.+|.+.+.+++++++++|||+||++++++++.++.+|+++|+++|+++++|+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~ 340 (997)
T TIGR01106 261 EIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVET 340 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHH
Confidence 99999988888777777776666655667888999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEeccccccccCceEEEEeeCCCC--------------CCc-----HHHHHHHHhhccc--c-----------C
Q 045750 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWG--------------FPK-----ENVLRFAFLNSYY--K-----------T 288 (792)
Q Consensus 241 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~--------------~~~-----~~~l~~a~~~~~~--~-----------~ 288 (792)
||++|++|||||||||+|+|++.+++..+. .+. +.++..+++++.. . .
T Consensus 341 lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~ 420 (997)
T TIGR01106 341 LGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRA 420 (997)
T ss_pred hcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccc
Confidence 999999999999999999999998863211 011 1344544443221 1 1
Q ss_pred CCCCchHHHHHHHHHhcCccc--ccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhccc
Q 045750 289 DQKYPLDDAILAYVYTNGYRF--QASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSF 366 (792)
Q Consensus 289 ~~~~p~~~al~~~~~~~~~~~--~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~ 366 (792)
..++|+|.|+++++...+... .+..++.++++||+|+||+|+++++.+..++ ..+++++||+||.++++|+.
T Consensus 421 ~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~------~~~~~~~KGApe~Il~~c~~ 494 (997)
T TIGR01106 421 VAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRD------PRHLLVMKGAPERILERCSS 494 (997)
T ss_pred cCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCC------ceEEEEEeCChHHHHHHhhH
Confidence 247999999999987544322 3457889999999999999998876421111 15789999999999999998
Q ss_pred ccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCcccc-CCCCC---CCCCCCcEEEEecccCCCCChh
Q 045750 367 VEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQ-SNRND---GPIESDMVFLGLITFYDPPKDS 442 (792)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~-~~~~~---~~~e~~l~~lG~i~~~d~~r~~ 442 (792)
+ ..+|...+++++.++.+.+..++++++|+||+++||+.+++++... +.... +..|+|++|+|+++++||+||+
T Consensus 495 ~--~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~ 572 (997)
T TIGR01106 495 I--LIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAA 572 (997)
T ss_pred H--hcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHH
Confidence 7 4678888999999999999999999999999999999886543221 11111 2348999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--------------------------CccccchhhhccCHHHH
Q 045750 443 AKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--------------------------THVSTGPDLELLSQESF 496 (792)
Q Consensus 443 ~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--------------------------~~~~~g~~~~~~~~~~~ 496 (792)
++++|++|+++|++++|+|||++.+|.++|+++|+.. ..+++|.+++.++++++
T Consensus 573 v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el 652 (997)
T TIGR01106 573 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQL 652 (997)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHH
Confidence 9999999999999999999999999999999999942 25899999999999999
Q ss_pred HHhhhcc--eEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCchH
Q 045750 497 HERVKRA--TVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNV 573 (792)
Q Consensus 497 ~~~~~~~--~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~~ 573 (792)
++.+.+. .||||++|+||.++|+.+|+.| ++|+|+|||.||+|||++|||||||| +|++.+|++||+++.+|+|+.
T Consensus 653 ~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g-~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~ 731 (997)
T TIGR01106 653 DEILKYHTEIVFARTSPQQKLIIVEGCQRQG-AIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 731 (997)
T ss_pred HHHHHhcCCEEEEECCHHHHHHHHHHHHHCC-CEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHH
Confidence 9988765 4999999999999999999999 99999999999999999999999999 799999999999999999999
Q ss_pred HHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCCC
Q 045750 574 LVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQI 652 (792)
Q Consensus 574 i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~~ 652 (792)
|++++++||++|.|+++++.|.++.|+..+++.+++.++..|.|++|+|++|+|+++| +|++++++|++++++|++||+
T Consensus 732 Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~ 811 (997)
T TIGR01106 732 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPR 811 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCc
Confidence 9999999999999999999999999999999999888888889999999999999999 689999999999999998887
Q ss_pred C-CCCCcc------hhhhhhhhHHHHHHHHHHHHHHHHhhh------------c----c----cc--h---------HHH
Q 045750 653 W-SENGLP------MFILFNGPVCILCDVTALFFLWFYYEA------------Y----N----QM--N---------VVF 694 (792)
Q Consensus 653 ~-~~~~l~------~~~~~~g~~~a~~~~~~~~~~~~~~~~------------~----~----~~--~---------~~~ 694 (792)
. +...+. ..+++.|+++++++++++++.+++.+. . + .. . ...
T Consensus 812 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (997)
T TIGR01106 812 NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFT 891 (997)
T ss_pred CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhh
Confidence 5 333333 234455777887777776655432110 0 0 00 0 015
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccc-ccchHHHHHHHHHHHHHHHHhhhcc-ccccccccccChhHHHHHHHHHHH
Q 045750 695 FRSAWFVEGLLMQTLIIHLIRTEKIPFIQ-EVASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTELPLTYFGFLLLLFIG 772 (792)
Q Consensus 695 ~~t~~f~~lv~~q~~~~~~~r~~~~~~~~-~~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~l~~~~w~~~l~~~~~ 772 (792)
++|++|.+++++|+++.+++|+++.++|+ .+.|+.++.++++.++++++++|+| ++.+|++.|+++.+|+++++++++
T Consensus 892 ~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~ 971 (997)
T TIGR01106 892 CHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLL 971 (997)
T ss_pred hhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHH
Confidence 79999999999999999999998888664 4789889888888899999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCC
Q 045750 773 YFTVGQLVKRIYILIYKKWL 792 (792)
Q Consensus 773 ~l~~~e~iK~~~~~~~~~~~ 792 (792)
.+++.++.|++.+|+.+.||
T Consensus 972 ~~~~~~~~k~~~r~~~~~~~ 991 (997)
T TIGR01106 972 IFVYDEIRKLIIRRNPGGWV 991 (997)
T ss_pred HHHHHHHHHHHHHhCCcchh
Confidence 99999999988876657775
No 8
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=8.1e-118 Score=1057.66 Aligned_cols=764 Identities=25% Similarity=0.387 Sum_probs=650.5
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
+++++++++++++||+++++++++++++.+++++|+| ||++++|+++||||||+|.+++||+|||||++++++
T Consensus 43 l~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViR-------dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~ 115 (917)
T TIGR01116 43 LLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLR-------DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLK 115 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEE-------CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEec
Confidence 4678889999999999999999999999999999999 999999999999999999999999999999999998
Q ss_pred CeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHH
Q 045750 82 HLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEK 160 (792)
Q Consensus 82 ~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~ 160 (792)
++.||||+|||||.|+.|.++...++..+..+++|++|+||.+.+|+++++|++||.+|+.|++.+.++.. .+++++++
T Consensus 116 ~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~ 195 (917)
T TIGR01116 116 TLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQK 195 (917)
T ss_pred ceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHH
Confidence 88999999999999999998755445556678889999999999999999999999999999999887654 45788999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccc------ccch----hHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCC
Q 045750 161 GVRRISFVLICVMLIVATIIILIDYFT------SKNL----SESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRC 230 (792)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~----~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i 230 (792)
.+++++..++.+.++++++.+++.... ..+| ...+..+++++++++|++||++++++++.++.+|+++|+
T Consensus 196 ~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~i 275 (917)
T TIGR01116 196 KLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNA 275 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCc
Confidence 999998877766666655554433211 1223 334556778899999999999999999999999999999
Q ss_pred ccccchhhhcccceeEEEeccccccccCceEEEEeeCCCC--------------CC-------------------cHHHH
Q 045750 231 VVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWG--------------FP-------------------KENVL 277 (792)
Q Consensus 231 ~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~--------------~~-------------------~~~~l 277 (792)
++|+++++|+||++|++|||||||||+|+|++.+++..++ +. .+.++
T Consensus 276 lvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 355 (917)
T TIGR01116 276 IVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELA 355 (917)
T ss_pred EecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHH
Confidence 9999999999999999999999999999999999865321 00 11233
Q ss_pred HHHHhhccc--cC--------CCCCchHHHHHHHHHhcCcccc------------------cccceEeEEeCCCCCCCeE
Q 045750 278 RFAFLNSYY--KT--------DQKYPLDDAILAYVYTNGYRFQ------------------ASKWKKLDEIPFDFVRRKV 329 (792)
Q Consensus 278 ~~a~~~~~~--~~--------~~~~p~~~al~~~~~~~~~~~~------------------~~~~~~~~~~~f~~~~k~~ 329 (792)
..+.+++.. .. ..++|+|.|+++++.+.|.+.. ...++.++++||+|+||||
T Consensus 356 ~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~m 435 (917)
T TIGR01116 356 TIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSM 435 (917)
T ss_pred HHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeE
Confidence 334333321 11 1479999999999988775432 2457789999999999999
Q ss_pred EEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhh-ccCeeEEEEEEec
Q 045750 330 SVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSN-EGLRVIGVAVKRL 408 (792)
Q Consensus 330 ~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~rvl~~a~~~~ 408 (792)
+++++.+ + ++.+++||+||.|+++|+.+. .++|...+++++.++++.+..+++++ +|+||+++|||.+
T Consensus 436 sviv~~~---~-------~~~~~~KGApe~il~~c~~~~-~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~ 504 (917)
T TIGR01116 436 SVLCKPS---T-------GNKLFVKGAPEGVLERCTHIL-NGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDI 504 (917)
T ss_pred EEEEeeC---C-------cEEEEEcCChHHHHHhcccee-cCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEEC
Confidence 9999853 2 678999999999999999763 23477789999999999999999999 9999999999998
Q ss_pred CCCcccc---CCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC------
Q 045750 409 LPQKSAQ---SNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT------ 479 (792)
Q Consensus 409 ~~~~~~~---~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~------ 479 (792)
++++... .....+++|+|++|+|+++++||+||+++++|++||++|++++|+|||+..+|.++|+++|+..
T Consensus 505 ~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~ 584 (917)
T TIGR01116 505 PDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT 584 (917)
T ss_pred CccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc
Confidence 6532211 1122356799999999999999999999999999999999999999999999999999999954
Q ss_pred CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHH
Q 045750 480 THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAK 559 (792)
Q Consensus 480 ~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~ 559 (792)
...++|.++..+++++..+...+..+|+|++|+||.++++.+|+.| ++|+|+|||.||+||+++||+||||++|++.+|
T Consensus 585 ~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g-~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak 663 (917)
T TIGR01116 585 FKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQG-EIVAMTGDGVNDAPALKKADIGIAMGSGTEVAK 663 (917)
T ss_pred ceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcC-CeEEEecCCcchHHHHHhCCeeEECCCCcHHHH
Confidence 2478999999999999988889999999999999999999999988 999999999999999999999999999999999
Q ss_pred hhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhhcc
Q 045750 560 DLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIP 638 (792)
Q Consensus 560 ~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~ 638 (792)
++||+++.+|+|..|.+++++||++|.|+++++.|.++.|+..+++.+++.++..+.|+++.|++|+|++++ +|+++++
T Consensus 664 ~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~ 743 (917)
T TIGR01116 664 EASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALG 743 (917)
T ss_pred HhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999888887777778999999999999999 8999999
Q ss_pred cCCCCccccCCCCCCCCCCcc-----hhhhhhhhHHHHHHHHHHHHHHHHhhhc-------------cc------chHHH
Q 045750 639 WDKMEGDYVKTPQIWSENGLP-----MFILFNGPVCILCDVTALFFLWFYYEAY-------------NQ------MNVVF 694 (792)
Q Consensus 639 ~~~~~~~~m~~p~~~~~~~l~-----~~~~~~g~~~a~~~~~~~~~~~~~~~~~-------------~~------~~~~~ 694 (792)
.+++++++|++||+++...++ ..+++.|+++++.+++.|.+.+...+.. ++ .....
T Consensus 744 ~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (917)
T TIGR01116 744 FNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQP 823 (917)
T ss_pred cCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccc
Confidence 999999999998876654333 3445566666655555444332211110 00 01346
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccc--ccchHHHHHHHHHHHHHHHHhhhcc-ccccccccccChhHHHHHHHHHH
Q 045750 695 FRSAWFVEGLLMQTLIIHLIRTEKIPFIQ--EVASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTELPLTYFGFLLLLFI 771 (792)
Q Consensus 695 ~~t~~f~~lv~~q~~~~~~~r~~~~~~~~--~~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~l~~~~w~~~l~~~~ 771 (792)
++|++|.+++++|+++.+++|+++.++|+ .+.|+++++++++.+++++++.|+| ++.+|++.|+++.+|++++++++
T Consensus 824 ~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~ 903 (917)
T TIGR01116 824 ARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSL 903 (917)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 78999999999999999999998888765 3678888888888899999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 045750 772 GYFTVGQLVKRIY 784 (792)
Q Consensus 772 ~~l~~~e~iK~~~ 784 (792)
..+++.|+.|++.
T Consensus 904 ~~~~~~e~~k~~~ 916 (917)
T TIGR01116 904 PVILVDEVLKFFS 916 (917)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999764
No 9
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=4.9e-117 Score=1048.98 Aligned_cols=750 Identities=26% Similarity=0.410 Sum_probs=647.0
Q ss_pred EEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC
Q 045750 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH 82 (792)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~ 82 (792)
++++++++++++||+++++++++++++.+++++|+| ||++++|+++||||||+|.+++||+|||||++++|++
T Consensus 88 ~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViR-------dg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~ 160 (884)
T TIGR01522 88 LAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIR-------EGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD 160 (884)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEE-------CCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc
Confidence 456778899999999999999999999999999999 9999999999999999999999999999999999988
Q ss_pred eEEEeccccCCCcccccccccccC-CCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChHHH
Q 045750 83 LVVSQSSLTGESWTAEKTADIRED-HCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDFEK 160 (792)
Q Consensus 83 ~~Vdes~ltGEs~p~~k~~~~~~~-~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~~~ 160 (792)
+.||||+|||||.|+.|.+++... ...+..+++|++|+||.+.+|++.++|++||.+|..|++.+.+++.+ +++++++
T Consensus 161 l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~ 240 (884)
T TIGR01522 161 LSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQK 240 (884)
T ss_pred eEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcHHH
Confidence 899999999999999999875432 23456688899999999999999999999999999999998887643 4678999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhc
Q 045750 161 GVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240 (792)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~ 240 (792)
.+++++.++..+.++++++.+++.++.+.+|.+++..++++++++|||+||++++++++.++.+|+|+|+++|+++++|+
T Consensus 241 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~ 320 (884)
T TIGR01522 241 SMDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVET 320 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHh
Confidence 99999988776665555555555555567788999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEeccccccccCceEEEEeeCCCCCC----------------------------cHHHHHHHHh-hcc-cc---
Q 045750 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFP----------------------------KENVLRFAFL-NSY-YK--- 287 (792)
Q Consensus 241 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~----------------------------~~~~l~~a~~-~~~-~~--- 287 (792)
||++|++|||||||||+|+|.+.+++..++.. .++++..+.+ +.. .+
T Consensus 321 Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 400 (884)
T TIGR01522 321 LGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEA 400 (884)
T ss_pred ccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCC
Confidence 99999999999999999999999986543210 1234444433 222 21
Q ss_pred -CCCCCchHHHHHHHHHhcCcccccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhccc
Q 045750 288 -TDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSF 366 (792)
Q Consensus 288 -~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~ 366 (792)
+..+||+|.|+++++...|.......++.++++||+++||+|+++++... ++ +++.++||+||.++..|+.
T Consensus 401 ~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~-~~-------~~~~~~KGape~il~~c~~ 472 (884)
T TIGR01522 401 DTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQ-DR-------SEMCFMKGAYEQVLKYCTY 472 (884)
T ss_pred CCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcC-CC-------eEEEEEeCChHHHHHhhhh
Confidence 22468999999999988776544456889999999999999999987632 23 6789999999999999987
Q ss_pred ccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHH
Q 045750 367 VEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQA 446 (792)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~ 446 (792)
.. ..+|...+++++.++++.+..++++++|+|++++||+++ +.+++|+|+++++||+||+++++
T Consensus 473 ~~-~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~---------------~~~l~~lGli~l~Dp~r~~~~~~ 536 (884)
T TIGR01522 473 YQ-KKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE---------------KGQLTFLGLVGINDPPRPGVKEA 536 (884)
T ss_pred hh-hcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC---------------CCCeEEEEEEeccCcchhHHHHH
Confidence 63 235667788899999999999999999999999999864 35789999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhc
Q 045750 447 LWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSV 524 (792)
Q Consensus 447 I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~ 524 (792)
|++|+++|++++|+|||++.+|.++|+++|+.. ..+++|.+++.++++++++.+.+..+|+|++|+||.++++.+|+.
T Consensus 537 i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~ 616 (884)
T TIGR01522 537 VTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKR 616 (884)
T ss_pred HHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHC
Confidence 999999999999999999999999999999963 467899999999999999999999999999999999999999999
Q ss_pred CCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHH
Q 045750 525 GKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGV 603 (792)
Q Consensus 525 ~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~ 603 (792)
| ++|+|+|||.||+||+++|||||||| ++++.++++||+++++|++..|.+++++||++|.|+++++.|.++.|+..+
T Consensus 617 g-~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~ 695 (884)
T TIGR01522 617 G-DVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAAL 695 (884)
T ss_pred C-CEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 9 99999999999999999999999999 799999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCCCCCCC-CcchhhhhhhhHHHHHHHH-HHHHH
Q 045750 604 LSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQIWSEN-GLPMFILFNGPVCILCDVT-ALFFL 680 (792)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~~~~~~-~l~~~~~~~g~~~a~~~~~-~~~~~ 680 (792)
++.+++.++..+.|++|+|++|+|+++| +|++++++|++++++|++||+++.. .+...++...++++++..+ +++.+
T Consensus 696 ~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 775 (884)
T TIGR01522 696 SLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVF 775 (884)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888889999999999999999 6789999999999999998876543 3333333333333333221 22222
Q ss_pred HHHhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--ccchHHHHHHHHHHHHHHHHhhhcc-ccccccccc
Q 045750 681 WFYYEAYNQMNVVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQ--EVASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTE 757 (792)
Q Consensus 681 ~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~--~~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~ 757 (792)
++.+ ..+.....++|++|.+++++|+++.+++|+++.++|+ .+.|+++++++++..+++++++|+| ++.+|++.|
T Consensus 776 ~~~~--~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~ 853 (884)
T TIGR01522 776 VREM--QDGVITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEA 853 (884)
T ss_pred HHHH--cCCcchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 2211 1111234678999999999999999999998888775 3678888888888899999999999 999999999
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045750 758 LPLTYFGFLLLLFIGYFTVGQLVKRIYIL 786 (792)
Q Consensus 758 l~~~~w~~~l~~~~~~l~~~e~iK~~~~~ 786 (792)
+++.+|+++++++++.+++.|+.|++.|+
T Consensus 854 l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 854 LSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999987654
No 10
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=4.9e-115 Score=1038.08 Aligned_cols=744 Identities=23% Similarity=0.311 Sum_probs=623.5
Q ss_pred EEehHhHHHHHHHHhHHHHHHHHhcc-CCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC
Q 045750 4 LVLISVCLRFYQEYGSSKAAMKLSEF-VRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH 82 (792)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~ 82 (792)
+++++.+++++||++++++.+++++. .+++++|+| ||++++|+++||||||+|.+++||+|||||++++|++
T Consensus 137 ~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViR-------dG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~ 209 (941)
T TIGR01517 137 SVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIR-------GGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLS 209 (941)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEE-------CCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCc
Confidence 45667889999999999999999874 478999999 9999999999999999999999999999999999977
Q ss_pred eEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCCCCChHHHHH
Q 045750 83 LVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGV 162 (792)
Q Consensus 83 ~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~~~~~~~~~~ 162 (792)
+.||||+|||||.|+.|.+++. |++|+||.+.+|++.++|++||.+|+.|++.+.+.+.++++++++.+
T Consensus 210 l~VdES~LTGES~pv~K~~~~~-----------n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~ 278 (941)
T TIGR01517 210 LEIDESSITGESDPIKKGAPKD-----------SFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKL 278 (941)
T ss_pred EEEEecccCCCCCcccccCCCC-----------ceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHH
Confidence 8999999999999999988643 79999999999999999999999999999999887765667899999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhc---cc----c---------cchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHh
Q 045750 163 RRISFVLICVMLIVATIIILIDY---FT----S---------KNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMA 226 (792)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~---~~----~---------~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~ 226 (792)
+++...+..++++++++.++++. .. . .++.+.+..++++++++|||+||++++++++.++.+|+
T Consensus 279 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~ma 358 (941)
T TIGR01517 279 SELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMM 358 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Confidence 99887776665555444433321 11 1 25677889999999999999999999999999999999
Q ss_pred hcCCccccchhhhcccceeEEEeccccccccCceEEEEeeCCCCC----------C--cHHHH-HHHHhhcccc------
Q 045750 227 RDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGF----------P--KENVL-RFAFLNSYYK------ 287 (792)
Q Consensus 227 ~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~----------~--~~~~l-~~a~~~~~~~------ 287 (792)
|+|+++|+++++|+||++|++|||||||||+|+|++.+++...+. + ..+++ ..+.+++...
T Consensus 359 k~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~ 438 (941)
T TIGR01517 359 KDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRG 438 (941)
T ss_pred hCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCC
Confidence 999999999999999999999999999999999999998654321 0 11222 3333433321
Q ss_pred ---CCCCCchHHHHHHHHHhcCccc--ccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHH
Q 045750 288 ---TDQKYPLDDAILAYVYTNGYRF--QASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIK 362 (792)
Q Consensus 288 ---~~~~~p~~~al~~~~~~~~~~~--~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~ 362 (792)
...+||+|.|+++++...|.+. .+..++.++.+||++++|+|+++++.+ ++ .+++++||+||.+++
T Consensus 439 ~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~--~~-------~~~~~~KGA~e~il~ 509 (941)
T TIGR01517 439 GKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHS--GG-------KVREFRKGASEIVLK 509 (941)
T ss_pred CccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeC--CC-------cEEEEEECChHHHHH
Confidence 2358999999999998766543 224567788999999999999999864 22 578999999999999
Q ss_pred hcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChh
Q 045750 363 VCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDS 442 (792)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~ 442 (792)
+|+... ..+|...++++ .++++.+..++++.+|+|++++||+.++.++.+ ..+..|+|++|+|+++++||+||+
T Consensus 510 ~c~~~~-~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~----~~~~~e~~l~~lGli~~~Dplr~~ 583 (941)
T TIGR01517 510 PCRKRL-DSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFP----RKDYPNGGLTLIGVVGIKDPLRPG 583 (941)
T ss_pred hhhHHh-hcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccc----cccccccCcEEEEEeeccCCCchh
Confidence 998752 23566667776 788899999999999999999999987643321 123357899999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHH
Q 045750 443 AKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQS 520 (792)
Q Consensus 443 ~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 520 (792)
++++|++||++||+++|+|||++.+|.++|+++||.. ..+++|+++..+.++++++.+.+..+|||++|+||.++|+.
T Consensus 584 ~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~ 663 (941)
T TIGR01517 584 VREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLM 663 (941)
T ss_pred HHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHH
Confidence 9999999999999999999999999999999999963 57999999999999999999999999999999999999999
Q ss_pred HhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHH
Q 045750 521 LQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIAN 599 (792)
Q Consensus 521 l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~ 599 (792)
+|+.| ++|+|+|||.||+|||++|||||||| +|++.++++||+++++|+|..|++++++||++|.|+++++.|.+++|
T Consensus 664 lq~~g-~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n 742 (941)
T TIGR01517 664 LKDMG-EVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVN 742 (941)
T ss_pred HHHCC-CEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 89999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCCCCCC-CCcchh----hhhhhhHHHHHH
Q 045750 600 LGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQIWSE-NGLPMF----ILFNGPVCILCD 673 (792)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~~~~~-~~l~~~----~~~~g~~~a~~~ 673 (792)
+..+++.+++.++..+.|++++|++|+|+++| +|++++++|+|++++|++||+++. +.+... +.+.|+++++..
T Consensus 743 ~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~ 822 (941)
T TIGR01517 743 VVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVT 822 (941)
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 99988888888888889999999999999999 689999999999999998887654 333333 333444444433
Q ss_pred HHHHHHHHHHhhhcc-----cchHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccc-cchHHHHHHHHHHHHHHHHhhh
Q 045750 674 VTALFFLWFYYEAYN-----QMNVVFFRSAWFVEGLLMQTLIIHLIRTEKI-PFIQE-VASWPVLSSTLVISAIGIAIPF 746 (792)
Q Consensus 674 ~~~~~~~~~~~~~~~-----~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~-~~~~~-~~n~~l~~~~~~~~~l~~~~~~ 746 (792)
++.++.....+.... .......+|+.|.+++++|+++.+++|+.+. +++++ +.|++++.++.+.+++++ .+
T Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~--~~ 900 (941)
T TIGR01517 823 FILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQV--II 900 (941)
T ss_pred HHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHH--HH
Confidence 333322211111111 0123567899999999999999999998764 55554 567766666655555553 34
Q ss_pred cc-ccccccccccChhHHHHHHHHHHHHHHHHHHHHHH
Q 045750 747 TA-IGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRI 783 (792)
Q Consensus 747 ~p-l~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~ 783 (792)
+| ++.+|++.|+++..|+++++++++.+++.|++|.+
T Consensus 901 ~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 901 VEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45 89999999999999999999999999999999875
No 11
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-117 Score=953.47 Aligned_cols=747 Identities=25% Similarity=0.350 Sum_probs=621.1
Q ss_pred hHhHHHHHHHHhHHHHHHHHhcc-CCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCCeEE
Q 045750 7 ISVCLRFYQEYGSSKAAMKLSEF-VRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLVV 85 (792)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~~~V 85 (792)
+..+...+.+|++++.+++|++. ...+..|+| +|+.++|+..||+||||+.++.||.+||||++++|.++.+
T Consensus 194 ~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR-------~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~i 266 (1034)
T KOG0204|consen 194 LVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIR-------GGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKI 266 (1034)
T ss_pred EEEEEeecchhHHhhhhhhhhhhhhceEEEEEE-------CCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeE
Confidence 33344455566666666656543 235789999 9999999999999999999999999999999999999999
Q ss_pred EeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChHHHHHHH
Q 045750 86 SQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDFEKGVRR 164 (792)
Q Consensus 86 des~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~~~~~~~ 164 (792)
|||++||||+++.|.+.. +.++++||++.+|+++++|+.+|.+|..|+++..+.... ..+++|-++++
T Consensus 267 DESSlTGESd~v~k~~~~-----------dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~ 335 (1034)
T KOG0204|consen 267 DESSLTGESDHVQKSLDK-----------DPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNG 335 (1034)
T ss_pred ecccccCCCcceeccCCC-----------CCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHH
Confidence 999999999999998753 378999999999999999999999999999999988755 67889999999
Q ss_pred HHHHHHHHHHHHHHHhhh---hhcccc-----------------cchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Q 045750 165 ISFVLICVMLIVATIIIL---IDYFTS-----------------KNLSESILFGISVACALTPQMFPLIVNTSLAKGALA 224 (792)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~---~~~~~~-----------------~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~ 224 (792)
++..+.-+.+.+|.+.++ +.++.+ ..+.+.+..++.++++++|++||+++++++++++++
T Consensus 336 lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kk 415 (1034)
T KOG0204|consen 336 LATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKK 415 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHH
Confidence 886655554444443332 222211 012334555667788999999999999999999999
Q ss_pred HhhcCCccccchhhhcccceeEEEeccccccccCceEEEEeeCCCCCC----------cHHHHHH----HHhhcc-----
Q 045750 225 MARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFP----------KENVLRF----AFLNSY----- 285 (792)
Q Consensus 225 ~~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~----------~~~~l~~----a~~~~~----- 285 (792)
|.+++.+||.++++|+||.+++||+|||||||+|+|.+++.+...... ++.+..+ .+.|+.
T Consensus 416 MmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~ 495 (1034)
T KOG0204|consen 416 MMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVK 495 (1034)
T ss_pred HhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEe
Confidence 999999999999999999999999999999999999999876433211 1122221 122221
Q ss_pred ------ccCCCCCchHHHHHHHHHhcCccc--ccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCCh
Q 045750 286 ------YKTDQKYPLDDAILAYVYTNGYRF--QASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGAL 357 (792)
Q Consensus 286 ------~~~~~~~p~~~al~~~~~~~~~~~--~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~ 357 (792)
-....++|.|.|++.+....|.++ .+.+.+..+.+||+|.||+|+++++.+. + +.+.++||+.
T Consensus 496 ~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~--~-------~~y~~~KGAs 566 (1034)
T KOG0204|consen 496 PEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPD--G-------GHYVHWKGAS 566 (1034)
T ss_pred cCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCC--C-------CeEEEEcChH
Confidence 123468999999999998887766 4677889999999999999999999752 2 3149999999
Q ss_pred HHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccc-cCCCCCCCCCCCcEEEEecccC
Q 045750 358 EEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSA-QSNRNDGPIESDMVFLGLITFY 436 (792)
Q Consensus 358 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~-~~~~~~~~~e~~l~~lG~i~~~ 436 (792)
|.+++.|+.+. ..+|+..+++++.++.+++.++.++.+|+|++|+||+++.+...+ ....+.+..+.+++++|+++++
T Consensus 567 EiVL~~C~~~~-~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIk 645 (1034)
T KOG0204|consen 567 EIVLKSCEYYI-DSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIK 645 (1034)
T ss_pred HHHHHhhhheE-CCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeecc
Confidence 99999999985 358899999999999999999999999999999999997655222 1122235678999999999999
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC----CCccccchhhhccCHHHHHHhhhcceEEEEeChh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR----TTHVSTGPDLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~----~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
||.||+++++|+.|+++||+|.|+||||..||++||.+|||- +..++.|+++.++++++.++..++..|++|.+|.
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 999999999999999999999999999999999999999992 2378999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHH
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKY 591 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~ 591 (792)
+|..+|+.++++| ++|+++|||.||.|+|++||||.||| .|+++||++||+|++||||.+|+++++|||+.|.|++|+
T Consensus 726 DK~lLVk~L~~~g-~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKF 804 (1034)
T KOG0204|consen 726 DKHLLVKGLIKQG-EVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKF 804 (1034)
T ss_pred hHHHHHHHHHhcC-cEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHh
Confidence 9999999999999 99999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCCCCC-CCCcchhhhhhhhHH
Q 045750 592 IKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQIWS-ENGLPMFILFNGPVC 669 (792)
Q Consensus 592 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~~~~-~~~l~~~~~~~g~~~ 669 (792)
++|.++.|+..++..+++....+..||++.|+||+|+++| +.+++|++|||.+++|+|||.-+ ...+.+.||-..+.+
T Consensus 805 iQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~q 884 (1034)
T KOG0204|consen 805 LQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQ 884 (1034)
T ss_pred heeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHH
Confidence 9999999999888888888888889999999999999999 88999999999999999877654 455566676667778
Q ss_pred HHHHHHHHHHHHHHhhhc------ccchHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccc-cchHHHHHHHHHHHHHH
Q 045750 670 ILCDVTALFFLWFYYEAY------NQMNVVFFRSAWFVEGLLMQTLIIHLIRTEK-IPFIQE-VASWPVLSSTLVISAIG 741 (792)
Q Consensus 670 a~~~~~~~~~~~~~~~~~------~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~-~~~~~~-~~n~~l~~~~~~~~~l~ 741 (792)
+++++.+.+.+.|.+..- .+.......|+.|.+++++|.||-++.|..+ ..+|+. +.|+.++..+.....++
T Consensus 885 a~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~Q 964 (1034)
T KOG0204|consen 885 AVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQ 964 (1034)
T ss_pred HHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehh
Confidence 888888777665543321 1112456678999999999999999999755 355665 44554333333333333
Q ss_pred HHhhhccccccccccccChhHHHHHHHHHHHHHHHHHHHHHH
Q 045750 742 IAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRI 783 (792)
Q Consensus 742 ~~~~~~pl~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~ 783 (792)
+.+.. ..+.+|++.+++|.+|++++.+.++.+++..++|.+
T Consensus 965 viIve-F~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 965 VIIVE-FGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred hhhhh-hcCcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 33222 278899999999999999999999999999999865
No 12
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=5.5e-111 Score=978.42 Aligned_cols=681 Identities=26% Similarity=0.430 Sum_probs=593.6
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
++++++++..++++||+++++++++++++.+++++|+| ||++++|+++||+|||+|.+++||+|||||++++|
T Consensus 61 i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~R-------dg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g 133 (755)
T TIGR01647 61 ILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLR-------DGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEG 133 (755)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE-------CCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEec
Confidence 35677888999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChHH
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDFE 159 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~~ 159 (792)
+++.||||+|||||.|+.|.++ |.+|+||.+.+|+++++|++||.+|++|++.+.+++.+ ++++++
T Consensus 134 ~~~~VDeS~LTGES~PV~K~~~-------------~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq 200 (755)
T TIGR01647 134 DYIQVDQAALTGESLPVTKKTG-------------DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQ 200 (755)
T ss_pred CceEEEcccccCCccceEeccC-------------CeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHH
Confidence 8789999999999999999887 66999999999999999999999999999999887655 456899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcc-cccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhh
Q 045750 160 KGVRRISFVLICVMLIVATIIILIDYF-TSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAI 238 (792)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~ 238 (792)
+.+++++.+++++.++++++.++++++ .+.+|.+++.+++++++++|||+||++++++++.++.+|+|+|+++|+++++
T Consensus 201 ~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~al 280 (755)
T TIGR01647 201 KILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAI 280 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHH
Confidence 999999999888888877777777665 5678999999999999999999999999999999999999999999999999
Q ss_pred hcccceeEEEeccccccccCceEEEEeeCCCC-CCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEe
Q 045750 239 RDMGTMDILCIDKTGTLTMDRAIMVNHLDSWG-FPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKL 317 (792)
Q Consensus 239 e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~ 317 (792)
|+||++|++|||||||||+|+|++.+++...+ .+.++++.++.+++ +..++||+|.|+++++.+.+ .....++..
T Consensus 281 E~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~l~~a~~~~--~~~~~~pi~~Ai~~~~~~~~--~~~~~~~~~ 356 (755)
T TIGR01647 281 EELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALAS--REEDQDAIDTAVLGSAKDLK--EARDGYKVL 356 (755)
T ss_pred HhccCCcEEEecCCCccccCceEEEEEEecCCCCCHHHHHHHHHHhC--CCCCCChHHHHHHHHHHHhH--HHHhcCceE
Confidence 99999999999999999999999999987643 66777888776544 45678999999999986543 123457788
Q ss_pred EEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhcc
Q 045750 318 DEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEG 397 (792)
Q Consensus 318 ~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 397 (792)
+.+||++.+|+++++++.+. ++ +++.++||+||.+++.|+.. ++.++++.+..++++.+|
T Consensus 357 ~~~pf~~~~k~~~~~v~~~~-~g-------~~~~~~kGa~e~il~~c~~~------------~~~~~~~~~~~~~~~~~G 416 (755)
T TIGR01647 357 EFVPFDPVDKRTEATVEDPE-TG-------KRFKVTKGAPQVILDLCDNK------------KEIEEKVEEKVDELASRG 416 (755)
T ss_pred EEeccCCCCCeEEEEEEeCC-Cc-------eEEEEEeCChHHHHHhcCCc------------HHHHHHHHHHHHHHHhCC
Confidence 99999999999999887531 23 56788999999999999743 345667788889999999
Q ss_pred CeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q 045750 398 LRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI 477 (792)
Q Consensus 398 ~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi 477 (792)
+|++++|+++ .|++++|+|+++++||+||+++++|++||++||+++|+|||++.+|.++|+++||
T Consensus 417 ~rvl~vA~~~---------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI 481 (755)
T TIGR01647 417 YRALGVARTD---------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGL 481 (755)
T ss_pred CEEEEEEEEc---------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 9999999973 2568999999999999999999999999999999999999999999999999999
Q ss_pred CCC-----ccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec
Q 045750 478 RTT-----HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD 552 (792)
Q Consensus 478 ~~~-----~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~ 552 (792)
... .+.+|.+.+.++++++++.+.+..+|+|++|+||.++|+.+|++| ++|+|+|||.||+|+|++|||||||+
T Consensus 482 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G-~~VamvGDGvNDapAL~~AdVGIAm~ 560 (755)
T TIGR01647 482 GTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRG-HLVGMTGDGVNDAPALKKADVGIAVA 560 (755)
T ss_pred CCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcC-CEEEEEcCCcccHHHHHhCCeeEEec
Confidence 653 223344445778889999999999999999999999999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhhh
Q 045750 553 SGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSV 632 (792)
Q Consensus 553 ~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 632 (792)
+|++.+|++||+|+++|++..|.+++++||++|.|+++++.|.++.|+..+++.+++.++++ .|++|+|++|+|+++|+
T Consensus 561 ~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~ 639 (755)
T TIGR01647 561 GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG 639 (755)
T ss_pred CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH
Confidence 99999999999999999999999999999999999999999999999998887777766555 35999999999999999
Q ss_pred hhhhcccCCCCccccCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHH---h-hhcccchHHHHHHHHHHHHHHHHH
Q 045750 633 GQIAIPWDKMEGDYVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFY---Y-EAYNQMNVVFFRSAWFVEGLLMQT 708 (792)
Q Consensus 633 ~~~~~~~~~~~~~~m~~p~~~~~~~l~~~~~~~g~~~a~~~~~~~~~~~~~---~-~~~~~~~~~~~~t~~f~~lv~~q~ 708 (792)
+++++++|++++. ++|++|+.+.+...+.+.|++.++..+..+++.+.. . ....+.+...++|++|..++++|.
T Consensus 640 ~~~~l~~~~~~~~--~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~ 717 (755)
T TIGR01647 640 TIMTIAYDNVKPS--KLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQ 717 (755)
T ss_pred hHhhccCCCCCCC--CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHH
Confidence 8999999999864 678888877777778888887776544444322210 0 011111345789999999999999
Q ss_pred HHHHHHhcCCcccccccchHHHHHHHHHHHHHHHHhh
Q 045750 709 LIIHLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIP 745 (792)
Q Consensus 709 ~~~~~~r~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~ 745 (792)
++.+++|+++.+| ..++++++++++++..++.+++.
T Consensus 718 ~~~~~~r~~~~~~-~~~p~~~l~~~~~~~~~~~~~~~ 753 (755)
T TIGR01647 718 ATIFVTRTHGFFW-SERPGKLLFIAFVIAQIIATFIA 753 (755)
T ss_pred HHHheeccCCCCc-ccCCcHHHHHHHHHHHHHHHHHh
Confidence 9999999988776 55789998888887777766554
No 13
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-114 Score=927.78 Aligned_cols=773 Identities=25% Similarity=0.357 Sum_probs=686.4
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
|+.+++++.+..+||+.+..+.+++++++.|+.++|+| ||+...+.+++||+||++.++-||+||||.+++++
T Consensus 132 L~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViR-------dg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~ 204 (1019)
T KOG0203|consen 132 LAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIR-------DGEKMTINAEELVVGDLVEVKGGDRVPADIRIISA 204 (1019)
T ss_pred EEEEEEEEecCCCccchhhHHHHHHHhccchhhheeee-------cceeEEechhhcccccceeeccCCcccceeEEEEe
Confidence 45678889999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcC-CCCCChHH
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGK-QKPPDDFE 159 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~-~~~~~~~~ 159 (792)
.+++||+|++||||+|..+.+...+ ...++..|+.|.+|.+.+|.++|+|++||.+|.+|+++..... ...+++++
T Consensus 205 ~g~~vdnsslTGesEP~~~~~~~t~---~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~ 281 (1019)
T KOG0203|consen 205 TGCKVDNSSLTGESEPQTRSPEFTH---ENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTPIA 281 (1019)
T ss_pred cceeEeccccccccCCccCCccccc---cCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCcch
Confidence 9999999999999999999887553 3348999999999999999999999999999999999887654 55677899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhh
Q 045750 160 KGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIR 239 (792)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e 239 (792)
+.++.+.+++...++++.+.++++....+.+|.+++.+.+.++++.+|++|+..++.++....+||+++++++||+.++|
T Consensus 282 ~ei~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeave 361 (1019)
T KOG0203|consen 282 KEIEHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVE 361 (1019)
T ss_pred hhhhchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeehee
Confidence 99999999999999888888888887778899999999999999999999999999999999999999999999999999
Q ss_pred cccceeEEEeccccccccCceEEEEeeCCCCC-------------------CcHHHHHHHHhhcccc-------------
Q 045750 240 DMGTMDILCIDKTGTLTMDRAIMVNHLDSWGF-------------------PKENVLRFAFLNSYYK------------- 287 (792)
Q Consensus 240 ~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-------------------~~~~~l~~a~~~~~~~------------- 287 (792)
+||..++||+|||||||+|+|+|.++|...+. +-.++.+.+.+++..+
T Consensus 362 tlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk 441 (1019)
T KOG0203|consen 362 TLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKR 441 (1019)
T ss_pred ecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeee
Confidence 99999999999999999999999998755432 1124555555444321
Q ss_pred CCCCCchHHHHHHHHHhc--CcccccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcc
Q 045750 288 TDQKYPLDDAILAYVYTN--GYRFQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCS 365 (792)
Q Consensus 288 ~~~~~p~~~al~~~~~~~--~~~~~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~ 365 (792)
.-.+++.|.|+++++... +....++.++.+.++||+|.+|..-.+.+.+.. ...+..+.+||+||.++++|+
T Consensus 442 ~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~------~~~~~~l~mKGape~il~~CS 515 (1019)
T KOG0203|consen 442 DVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDP------SDPRFLLVMKGAPERILDRCS 515 (1019)
T ss_pred eccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCC------CCccceeeecCChHHHHhhcc
Confidence 235789999999998642 224457788899999999999998887765421 223788999999999999999
Q ss_pred cccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccC----CCCCCCCCCCcEEEEecccCCCCCh
Q 045750 366 FVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQS----NRNDGPIESDMVFLGLITFYDPPKD 441 (792)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~----~~~~~~~e~~l~~lG~i~~~d~~r~ 441 (792)
.+ ..+|+..|++++.++.+.+.+.++...|.||+++|++.++.++.+.. ...-+....++.|+|++++-||||.
T Consensus 516 Ti--~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~ 593 (1019)
T KOG0203|consen 516 TI--LINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRA 593 (1019)
T ss_pred ce--eecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcc
Confidence 99 68999999999999999999999999999999999998876533221 1112334578999999999999999
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC--------------------------CCCccccchhhhccCHHH
Q 045750 442 SAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI--------------------------RTTHVSTGPDLELLSQES 495 (792)
Q Consensus 442 ~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi--------------------------~~~~~~~g~~~~~~~~~~ 495 (792)
.+++++.+||++||+++|+|||++.||+++|++.|| ..+.+++|.++.+++.++
T Consensus 594 ~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~q 673 (1019)
T KOG0203|consen 594 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQ 673 (1019)
T ss_pred cCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHH
Confidence 999999999999999999999999999999999997 135689999999999999
Q ss_pred HHHhhhcc--eEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCch
Q 045750 496 FHERVKRA--TVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLN 572 (792)
Q Consensus 496 ~~~~~~~~--~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~ 572 (792)
+++++.+. .||||.+|+||..||+.+|++| .+|+++|||+||.||||+||+||||| .|+|.+|++||++++||||.
T Consensus 674 ld~il~nh~eIVFARTSPqQKLiIVe~cQr~G-aiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFA 752 (1019)
T KOG0203|consen 674 LDELLQNHQEIVFARTSPQQKLIIVEGCQRQG-AIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 752 (1019)
T ss_pred HHHHHHhCCceEEEecCccceEEeEhhhhhcC-cEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcch
Confidence 99998764 6999999999999999999999 99999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCC
Q 045750 573 VLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQ 651 (792)
Q Consensus 573 ~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~ 651 (792)
+|+..+++||.+|+|++|.|.|.++.|+.++.++++..++..|.|++++++|.+.+.+| +|++||+||++|.|+|+|||
T Consensus 753 SIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~P 832 (1019)
T KOG0203|consen 753 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPP 832 (1019)
T ss_pred hheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCC
Confidence 99999999999999999999999999999999999998999999999999999999999 78999999999999999988
Q ss_pred CCC-------CCCcchhhhhhhhHHHHHHHHHHHHHHHHhhh------------c----------ccc--h-------HH
Q 045750 652 IWS-------ENGLPMFILFNGPVCILCDVTALFFLWFYYEA------------Y----------NQM--N-------VV 693 (792)
Q Consensus 652 ~~~-------~~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~~------------~----------~~~--~-------~~ 693 (792)
|.. .+.+...+...|.++++..+++||..+...+. . .+. + ..
T Consensus 833 R~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~ 912 (1019)
T KOG0203|consen 833 RNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEY 912 (1019)
T ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHH
Confidence 762 35667889999999999888888765332111 0 000 0 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccc-ccchHHHHHHHHHHHHHHHHhhhcc-ccccccccccChhHHHHHHHHHH
Q 045750 694 FFRSAWFVEGLLMQTLIIHLIRTEKIPFIQ-EVASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTELPLTYFGFLLLLFI 771 (792)
Q Consensus 694 ~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~-~~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~l~~~~w~~~l~~~~ 771 (792)
+.+|+.|.+++..|+..++.+.|+|.+.|+ +..||.+.++++.-.++++++.|.| ....+++.|++|.||+..+..++
T Consensus 913 tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~i 992 (1019)
T KOG0203|consen 913 TCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGI 992 (1019)
T ss_pred hhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEeccccee
Confidence 678889999999999999999999999776 5899999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCC
Q 045750 772 GYFTVGQLVKRIYILIYKKWL 792 (792)
Q Consensus 772 ~~l~~~e~iK~~~~~~~~~~~ 792 (792)
.+++.+|+.|.++|++...|+
T Consensus 993 lIfvydE~Rk~~IR~~P~gw~ 1013 (1019)
T KOG0203|consen 993 LIFVYDEVRKLFIRRYPGGWL 1013 (1019)
T ss_pred eeeeHHHHHhHhhhhCCCchh
Confidence 999999999999999988885
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=2.8e-104 Score=954.00 Aligned_cols=721 Identities=23% Similarity=0.278 Sum_probs=571.3
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEEC--CCCeecccEEEEE
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFE--PGDLFPGDVRLLT 79 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~--~G~~iPaD~~ll~ 79 (792)
+++++++.++.++|++++.++++++.. .++.++|+| ||++++|+++||||||+|.++ +|++|||||++++
T Consensus 200 ~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~R-------dg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~ 271 (1054)
T TIGR01657 200 VFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIR-------NGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS 271 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEE-------CCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe
Confidence 345677888899999999888877655 467999999 999999999999999999999 9999999999999
Q ss_pred eCCeEEEeccccCCCccccccccccc---C--CCCCCCcccceEeeccEEee-------eeEEEEEEeeccccHHHHHHh
Q 045750 80 SKHLVVSQSSLTGESWTAEKTADIRE---D--HCTPLLDLKNICFMGTNVVS-------GSGTGLVVSTGSKTYTSTMFS 147 (792)
Q Consensus 80 ~~~~~Vdes~ltGEs~p~~k~~~~~~---~--~~~~~~~~~~~v~~Gt~v~~-------g~~~~~V~~tG~~t~~~~~~~ 147 (792)
|+ +.||||+|||||.|+.|.+.+.. + ......+.+|++|+||.+.+ |.+.++|++||.+|..|++.+
T Consensus 272 g~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~ 350 (1054)
T TIGR01657 272 GS-CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVR 350 (1054)
T ss_pred Cc-EEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHH
Confidence 95 79999999999999999886431 1 11234578899999999995 789999999999999999999
Q ss_pred hhcCCC-CCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHh
Q 045750 148 TIGKQK-PPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMA 226 (792)
Q Consensus 148 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~ 226 (792)
.+...+ ..+++++...++..+++.++++.+++.++.....+.++.+.+..+++++++++|++||++++++++.++.+|+
T Consensus 351 ~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~ 430 (1054)
T TIGR01657 351 SILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLK 430 (1054)
T ss_pred HhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHH
Confidence 886543 4567888888877766655554444433333334567889999999999999999999999999999999999
Q ss_pred hcCCccccchhhhcccceeEEEeccccccccCceEEEEeeCCCCCC-------------cH-HHHHHHHhhcccc---CC
Q 045750 227 RDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFP-------------KE-NVLRFAFLNSYYK---TD 289 (792)
Q Consensus 227 ~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~-------------~~-~~l~~a~~~~~~~---~~ 289 (792)
|+|++||++.++|.+|++|++|||||||||+|+|.+.+++...... .. ....++.||+... ..
T Consensus 431 k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~ 510 (1054)
T TIGR01657 431 KKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKL 510 (1054)
T ss_pred HCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEE
Confidence 9999999999999999999999999999999999999987543210 11 1233445554322 23
Q ss_pred CCCchHHHHHHHHHhcCcccc--------------------cccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCce
Q 045750 290 QKYPLDDAILAYVYTNGYRFQ--------------------ASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGR 349 (792)
Q Consensus 290 ~~~p~~~al~~~~~~~~~~~~--------------------~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~ 349 (792)
.+||+|.|+++++. +... ...++.++++||+|++|||+++++.++ ++ ++
T Consensus 511 ~Gdp~E~al~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~-~~-------~~ 579 (1054)
T TIGR01657 511 VGDPLDKKMFEATG---WTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTND-ER-------SP 579 (1054)
T ss_pred ecCHHHHHHHHhCC---CEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcC-CC-------eE
Confidence 58999999999862 1110 246788999999999999999998642 22 57
Q ss_pred EEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccc-cCCCCCCCCCCCcE
Q 045750 350 FVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSA-QSNRNDGPIESDMV 428 (792)
Q Consensus 350 ~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~-~~~~~~~~~e~~l~ 428 (792)
++++|||||.|+++|+.. ..++++.+..++++.+|+||+++|||++++.... .....++++|+|++
T Consensus 580 ~~~~KGApE~Il~~c~~~-------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~ 646 (1054)
T TIGR01657 580 DAFVKGAPETIQSLCSPE-------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLT 646 (1054)
T ss_pred EEEEECCHHHHHHHcCCc-------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCce
Confidence 899999999999999842 1135567778999999999999999998632211 11234567899999
Q ss_pred EEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC----------------------------
Q 045750 429 FLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT---------------------------- 480 (792)
Q Consensus 429 ~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~---------------------------- 480 (792)
|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||...
T Consensus 647 flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 726 (1054)
T TIGR01657 647 FLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSI 726 (1054)
T ss_pred EEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcc
Confidence 9999999999999999999999999999999999999999999999999321
Q ss_pred ---------------------------ccccchhhhc---cCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEE
Q 045750 481 ---------------------------HVSTGPDLEL---LSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVG 530 (792)
Q Consensus 481 ---------------------------~~~~g~~~~~---~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~ 530 (792)
.+++|++++. +.++++.+.+.+..||||++|+||.++|+.+|+.| +.|+
T Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g-~~V~ 805 (1054)
T TIGR01657 727 PFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLD-YTVG 805 (1054)
T ss_pred ccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCC-CeEE
Confidence 2455666544 34567888888999999999999999999999999 9999
Q ss_pred EEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 045750 531 FLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIAT 610 (792)
Q Consensus 531 ~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~ 610 (792)
|+|||.||+||||+|||||||+++ | +..+||+++.++++++|.++|++||+++.|++++++|.+.+++...+..++
T Consensus 806 m~GDG~ND~~ALK~AdVGIam~~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-- 881 (1054)
T TIGR01657 806 MCGDGANDCGALKQADVGISLSEA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-- 881 (1054)
T ss_pred EEeCChHHHHHHHhcCcceeeccc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 999999999999999999999865 2 458899999999999999999999999999999999999999987666554
Q ss_pred HHhcCCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCCCCCC--CCcchhhhhhhhHHHHHHHHHHHHHHHHhhhc
Q 045750 611 MFLQTDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQIWSE--NGLPMFILFNGPVCILCDVTALFFLWFYYEAY 687 (792)
Q Consensus 611 ~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~~~~~--~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~~~ 687 (792)
++....|+++.|++|++++++ +++++++.++|++++|++||..+. +..+..++..+++..++.+..+.+... ..+.
T Consensus 882 l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~-~~~~ 960 (1054)
T TIGR01657 882 LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPPSNLFSVYILTSVLIQFVLHILSQVYLVFELHA-QPWY 960 (1054)
T ss_pred HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCc
Confidence 334457899999999999999 678999999999999998885432 112222333333333333333322211 0010
Q ss_pred ---c------cchHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-cchHHHHHHHHHHHHHHH--Hhhhcc-cccccc
Q 045750 688 ---N------QMNVVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQE-VASWPVLSSTLVISAIGI--AIPFTA-IGDVMG 754 (792)
Q Consensus 688 ---~------~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~~-~~n~~l~~~~~~~~~l~~--~~~~~p-l~~~f~ 754 (792)
. .......+|+.| .+..+|.+..+.+++.+.||.++ +.|+.+++++++..++++ ++.+.| ++.+|+
T Consensus 961 ~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1039 (1054)
T TIGR01657 961 KPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQ 1039 (1054)
T ss_pred cCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhhe
Confidence 0 111234567777 55566777778888888889887 578777777766655444 344677 999999
Q ss_pred ccccChhH
Q 045750 755 FTELPLTY 762 (792)
Q Consensus 755 ~~~l~~~~ 762 (792)
+.++|..|
T Consensus 1040 ~~~~~~~~ 1047 (1054)
T TIGR01657 1040 IVPLPQEF 1047 (1054)
T ss_pred eeeCCHHH
Confidence 99998654
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2.1e-94 Score=871.52 Aligned_cols=743 Identities=19% Similarity=0.210 Sum_probs=551.8
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccC-CeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQS-ELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~-g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
+++++++.+.+++|+++++++.++.+ +++++|+| + |++++++++||+|||+|.+++||+||||++++++
T Consensus 58 ~~v~~~~~~~~~~ed~~r~~~d~~~n---~~~~~v~~-------~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~s 127 (1057)
T TIGR01652 58 AFVLIVTAIKEAIEDIRRRRRDKEVN---NRLTEVLE-------GHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSS 127 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHh---CcEEEEEC-------CCCcEEEeeeecccCCCEEEEcCCCcccceEEEEec
Confidence 34566899999999999999887654 56899999 6 7999999999999999999999999999999997
Q ss_pred CC----eEEEeccccCCCcccccccccccC----------------------------------C-CCCCCcccceEeec
Q 045750 81 KH----LVVSQSSLTGESWTAEKTADIRED----------------------------------H-CTPLLDLKNICFMG 121 (792)
Q Consensus 81 ~~----~~Vdes~ltGEs~p~~k~~~~~~~----------------------------------~-~~~~~~~~~~v~~G 121 (792)
++ +.||||+||||+.|+.|.+..... . ....++.+|++++|
T Consensus 128 s~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rG 207 (1057)
T TIGR01652 128 SEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRG 207 (1057)
T ss_pred cCCCceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcC
Confidence 65 899999999999999997642110 0 22356789999999
Q ss_pred cEEee-eeEEEEEEeeccccHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccc-----ch----
Q 045750 122 TNVVS-GSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSK-----NL---- 191 (792)
Q Consensus 122 t~v~~-g~~~~~V~~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---- 191 (792)
|.+.+ |+++|+|++||.+|++++.. ...+.+.+++++.++++..+++.+.+++|++.+++..++.. .|
T Consensus 208 s~l~nt~~~~gvVvyTG~~Tk~~~n~--~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~ 285 (1057)
T TIGR01652 208 CTLRNTDWVIGVVVYTGHDTKLMRNA--TQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRL 285 (1057)
T ss_pred CEecCCCeEEEEEEEEchhhhhhhcC--CCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceec
Confidence 99999 89999999999999887543 22345678899999999988888877777776665433221 22
Q ss_pred -----------hHHHHHHHHHHHHHhcchhHHHHHHHHHHHH------HHHhhc----CCccccchhhhcccceeEEEec
Q 045750 192 -----------SESILFGISVACALTPQMFPLIVNTSLAKGA------LAMARD----RCVVKSLGAIRDMGTMDILCID 250 (792)
Q Consensus 192 -----------~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~------~~~~~~----~i~vk~~~~~e~lg~v~~i~~D 250 (792)
...+..++.++..++|++|++.+++....++ .+|.++ ++.+|+.+.+|+||++++||+|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sD 365 (1057)
T TIGR01652 286 DVSERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSD 365 (1057)
T ss_pred CcccccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEc
Confidence 2266778888899999999999999999998 778764 4999999999999999999999
Q ss_pred cccccccCceEEEEeeCCCC----------------C--------------------C----------------cHHHH-
Q 045750 251 KTGTLTMDRAIMVNHLDSWG----------------F--------------------P----------------KENVL- 277 (792)
Q Consensus 251 KTGTLT~~~~~v~~~~~~~~----------------~--------------------~----------------~~~~l- 277 (792)
||||||+|+|.+.++...+. . + ..+.+
T Consensus 366 KTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 445 (1057)
T TIGR01652 366 KTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFL 445 (1057)
T ss_pred CCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHH
Confidence 99999999999999852110 0 0 01222
Q ss_pred HHHHhhccc-c----------CCCCCchHHHHHHHHHhcCcccc----------------cccceEeEEeCCCCCCCeEE
Q 045750 278 RFAFLNSYY-K----------TDQKYPLDDAILAYVYTNGYRFQ----------------ASKWKKLDEIPFDFVRRKVS 330 (792)
Q Consensus 278 ~~a~~~~~~-~----------~~~~~p~~~al~~~~~~~~~~~~----------------~~~~~~~~~~~f~~~~k~~~ 330 (792)
.++.||+.. . +..++|+|.|++++++..|+.+. ...|+.++.+||+++||||+
T Consensus 446 ~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmS 525 (1057)
T TIGR01652 446 ALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMS 525 (1057)
T ss_pred HHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEE
Confidence 233444321 1 12579999999999998887652 24688899999999999999
Q ss_pred EEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCC
Q 045750 331 VILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLP 410 (792)
Q Consensus 331 v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~ 410 (792)
++++++ ++ ++++++|||||.|+++|+.. +++.++.+.+..++++.+|+||+++|+|.+++
T Consensus 526 viv~~~--~~-------~~~l~~KGA~e~il~~~~~~-----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~ 585 (1057)
T TIGR01652 526 VIVRNP--DG-------RIKLLCKGADTVIFKRLSSG-----------GNQVNEETKEHLENYASEGLRTLCIAYRELSE 585 (1057)
T ss_pred EEEEeC--CC-------eEEEEEeCcHHHHHHHhhcc-----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCH
Confidence 999875 23 57899999999999999742 13556778889999999999999999999976
Q ss_pred CccccCC------------------CCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 045750 411 QKSAQSN------------------RNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKIC 472 (792)
Q Consensus 411 ~~~~~~~------------------~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia 472 (792)
++..++. ...+++|+|++|+|+++++|++||+++++|+.|+++||++||+|||+.+||.++|
T Consensus 586 ~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA 665 (1057)
T TIGR01652 586 EEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIG 665 (1057)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHH
Confidence 5332110 0124578999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCC-------------------------------------------ccccchhhhccCHH----HHHHhhhc--c
Q 045750 473 HEVGIRTT-------------------------------------------HVSTGPDLELLSQE----SFHERVKR--A 503 (792)
Q Consensus 473 ~~~gi~~~-------------------------------------------~~~~g~~~~~~~~~----~~~~~~~~--~ 503 (792)
+++|+-.. .+++|++++.+.++ ++.+.... .
T Consensus 666 ~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~ 745 (1057)
T TIGR01652 666 YSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKA 745 (1057)
T ss_pred HHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCE
Confidence 99998321 25677776654433 23444443 4
Q ss_pred eEEEEeChhhHHHHHHHHhhc-CCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCchHHHHHH-HH
Q 045750 504 TVLARLTPTQKLRVVQSLQSV-GKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGV-ER 580 (792)
Q Consensus 504 ~v~~~~~p~~K~~iv~~l~~~-~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~~i~~~i-~~ 580 (792)
.||||++|+||.++|+.+|+. | ++|+|+|||.||++||++|||||++. ....+++.+||+++. +|+.+.+++ .|
T Consensus 746 vV~aR~sP~qK~~IV~~lk~~~~-~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~--~F~~L~~lll~~ 822 (1057)
T TIGR01652 746 VICCRVSPSQKADVVRLVKKSTG-KTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIG--QFRFLTKLLLVH 822 (1057)
T ss_pred EEEeCCCHHHHHHHHHHHHhcCC-CeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhh--hHHHHHHHHHhh
Confidence 599999999999999999998 6 99999999999999999999999984 333478999999995 499999998 99
Q ss_pred hHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCchHHHHHHHHHHhh-hhhhhccc--CCCCccccCCCCC-C
Q 045750 581 GRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQT---DPLTPKQLLTQNFLYS-VGQIAIPW--DKMEGDYVKTPQI-W 653 (792)
Q Consensus 581 gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~-~~~~~~~~--~~~~~~~m~~p~~-~ 653 (792)
||+.|.|+++.+.|.++.|+..++..++..++..+ .++.+.+++|.|++++ +|+++++. ++++++.|.++|+ |
T Consensus 823 GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly 902 (1057)
T TIGR01652 823 GRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLY 902 (1057)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHH
Confidence 99999999999999999999888888777666544 4678899999999988 78888864 3445566655443 3
Q ss_pred C----CCCcc----hhhhhhhhHHHHHHHHHHHHHHHHhhh----ccc--chHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 045750 654 S----ENGLP----MFILFNGPVCILCDVTALFFLWFYYEA----YNQ--MNVVFFRSAWFVEGLLMQTLIIHLIRTEKI 719 (792)
Q Consensus 654 ~----~~~l~----~~~~~~g~~~a~~~~~~~~~~~~~~~~----~~~--~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~ 719 (792)
+ .+.+. ..+.+.|++++++.++ +.++.+.. .++ .+.....++.|..+++...+.++. .+++|
T Consensus 903 ~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~w 978 (1057)
T TIGR01652 903 REGQKGQGFSTKTFWGWMLDGIYQSLVIFF---FPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIAL-EINRW 978 (1057)
T ss_pred HHhhhcCCCCHHHHHHHHHHHHHHHHHHHH---HHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHH-HHhHh
Confidence 2 22221 2233445555543322 22222111 111 134456667777776666666543 33343
Q ss_pred ccccccchHHHHHHHHHHHHHH-HHhhhcc----ccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045750 720 PFIQEVASWPVLSSTLVISAIG-IAIPFTA----IGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYILI 787 (792)
Q Consensus 720 ~~~~~~~n~~l~~~~~~~~~l~-~~~~~~p----l~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~ 787 (792)
+++. +...+..+++.++. .+....+ +...+...-..+.+|+.+++..++.+++..++|.+.+.+
T Consensus 979 t~~~----~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~ 1047 (1057)
T TIGR01652 979 NWIS----LITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLF 1047 (1057)
T ss_pred HHHH----HHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3322 11112222211111 1111111 111111122356788888888888888888887665543
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.2e-89 Score=818.87 Aligned_cols=743 Identities=19% Similarity=0.222 Sum_probs=541.1
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
+++++++++.+.+++++++|+.++.+ ++.++|.| +|++++++|++|+|||+|.+++||++|||+++++++
T Consensus 144 ~~vl~v~~ike~~Ed~~r~k~d~~~N---~~~~~v~~-------~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss 213 (1178)
T PLN03190 144 AFVLLVTAVKDAYEDWRRHRSDRIEN---NRLAWVLV-------DDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTS 213 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhc---CcEEEEEE-------CCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEecc
Confidence 46778899999999999999888764 56889998 999999999999999999999999999999999865
Q ss_pred C----eEEEeccccCCCcccccccccccC--------------------------------CCCCCCcccceEeeccEEe
Q 045750 82 H----LVVSQSSLTGESWTAEKTADIRED--------------------------------HCTPLLDLKNICFMGTNVV 125 (792)
Q Consensus 82 ~----~~Vdes~ltGEs~p~~k~~~~~~~--------------------------------~~~~~~~~~~~v~~Gt~v~ 125 (792)
+ ++||||+||||+.|+.|.+++... .....++.+|++++|+.+.
T Consensus 214 ~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~Lr 293 (1178)
T PLN03190 214 DPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELK 293 (1178)
T ss_pred CCCceEEEEccccCCeeeeeEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceec
Confidence 4 799999999999999998764311 1112466789999999999
Q ss_pred eee-EEEEEEeeccccHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc----c-----ch----
Q 045750 126 SGS-GTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFTS----K-----NL---- 191 (792)
Q Consensus 126 ~g~-~~~~V~~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~---- 191 (792)
+.. ++|+|++||.+|+. +++....+.+.+++++.+|++..+++.+.+++|++..++...+. . .|
T Consensus 294 nT~~i~GvVVYTG~dTK~--~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~ 371 (1178)
T PLN03190 294 NTAWAIGVAVYCGRETKA--MLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRK 371 (1178)
T ss_pred CCceEEEEEEEechhhhH--hhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccc
Confidence 885 99999999999963 33444445567889999999998888888777777655532110 0 01
Q ss_pred -------------------hHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcC----------Cccccchhhhccc
Q 045750 192 -------------------SESILFGISVACALTPQMFPLIVNTSLAKGALAMARDR----------CVVKSLGAIRDMG 242 (792)
Q Consensus 192 -------------------~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~----------i~vk~~~~~e~lg 242 (792)
...+...+.++...+|.+|++.+.+.....+..+.++. +.+|+.+..|+||
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLG 451 (1178)
T PLN03190 372 DFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLG 451 (1178)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhc
Confidence 11122334566689999999999999987787777655 6799999999999
Q ss_pred ceeEEEeccccccccCceEEEEeeCCC----------------------C--------C--------------C-c----
Q 045750 243 TMDILCIDKTGTLTMDRAIMVNHLDSW----------------------G--------F--------------P-K---- 273 (792)
Q Consensus 243 ~v~~i~~DKTGTLT~~~~~v~~~~~~~----------------------~--------~--------------~-~---- 273 (792)
++++||+|||||||+|+|.+.++...+ + . + +
T Consensus 452 qV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (1178)
T PLN03190 452 QIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKH 531 (1178)
T ss_pred cceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHH
Confidence 999999999999999999999874210 0 0 0 0
Q ss_pred -HH-HHHHHHhhcccc---------------CCCCCchHHHHHHHHHhcCccc--------------ccccceEeEEeCC
Q 045750 274 -EN-VLRFAFLNSYYK---------------TDQKYPLDDAILAYVYTNGYRF--------------QASKWKKLDEIPF 322 (792)
Q Consensus 274 -~~-~l~~a~~~~~~~---------------~~~~~p~~~al~~~~~~~~~~~--------------~~~~~~~~~~~~f 322 (792)
.+ ++.+|.||.... +.+++|+|.|++++|.+.|+.+ ....|+.++.+||
T Consensus 532 i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF 611 (1178)
T PLN03190 532 VHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEF 611 (1178)
T ss_pred HHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecc
Confidence 11 223445554321 2345899999999999988732 4567899999999
Q ss_pred CCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEE
Q 045750 323 DFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIG 402 (792)
Q Consensus 323 ~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~ 402 (792)
+++||||+++++.+ ++ .+++++|||||.|+++|+... +++.++++.+..++++++|+||++
T Consensus 612 ~S~rKrMSvIv~~~--~~-------~~~l~~KGA~e~il~~~~~~~----------~~~~~~~~~~~l~~~a~~GlRtL~ 672 (1178)
T PLN03190 612 DSDRKRMSVILGCP--DK-------TVKVFVKGADTSMFSVIDRSL----------NMNVIRATEAHLHTYSSLGLRTLV 672 (1178)
T ss_pred cccccEEEEEEEcC--CC-------cEEEEEecCcHHHHHhhcccc----------cchhHHHHHHHHHHHHhcCCceEE
Confidence 99999999999864 23 678999999999999997541 234567788889999999999999
Q ss_pred EEEEecCCCccccCC------------------CCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCC
Q 045750 403 VAVKRLLPQKSAQSN------------------RNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDS 464 (792)
Q Consensus 403 ~a~~~~~~~~~~~~~------------------~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~ 464 (792)
+|||.+++++..++. ...+++|+|++++|+++++|++|++++++|++|+++|+++||+|||+
T Consensus 673 lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~ 752 (1178)
T PLN03190 673 VGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDK 752 (1178)
T ss_pred EEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCC
Confidence 999999765433221 11246799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCC---------------------------------------------------ccccchhhhccCH
Q 045750 465 LSLAIKICHEVGIRTT---------------------------------------------------HVSTGPDLELLSQ 493 (792)
Q Consensus 465 ~~~a~~ia~~~gi~~~---------------------------------------------------~~~~g~~~~~~~~ 493 (792)
.++|.++|+++|+-.. .+++|.++..+.+
T Consensus 753 ~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~ 832 (1178)
T PLN03190 753 QETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLD 832 (1178)
T ss_pred HHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhh
Confidence 9999999999998211 3456666665543
Q ss_pred ----HHHHHhhhc--ceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEe
Q 045750 494 ----ESFHERVKR--ATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIIL 566 (792)
Q Consensus 494 ----~~~~~~~~~--~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl 566 (792)
+.+.+...+ +.||||++|+||+++|+.+|+.+++.|+|+|||.||++||++|||||++. ....+|+.+||+.+
T Consensus 833 ~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI 912 (1178)
T PLN03190 833 SELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAM 912 (1178)
T ss_pred hHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccch
Confidence 344454444 45899999999999999999985589999999999999999999999873 44458999999999
Q ss_pred ccCCchHHHHHH-HHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc---hHHHHHHHHH-Hhhhhhhhcc-c-
Q 045750 567 LEKDLNVLVAGV-ERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPL---TPKQLLTQNF-LYSVGQIAIP-W- 639 (792)
Q Consensus 567 ~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~-~~~~~~~~~~-~- 639 (792)
+.|+.+.+++ .|||+.|.|+.+.+.|.++.|+..+++.+...++.++++- .++-+...|+ ++.+|.++++ +
T Consensus 913 --~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD 990 (1178)
T PLN03190 913 --GQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILD 990 (1178)
T ss_pred --hhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhc
Confidence 6699999998 6999999999999999999999988888887777776543 4555544554 4558887764 3
Q ss_pred -CCCCccccCCCCCCCCC---Ccc-----hhhhhhhhHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHH
Q 045750 640 -DKMEGDYVKTPQIWSEN---GLP-----MFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLI 710 (792)
Q Consensus 640 -~~~~~~~m~~p~~~~~~---~l~-----~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~ 710 (792)
|-++..+++.|..|+.. ..+ ..+++.|++++++. |++.++.+... ..+.....+.++...++...+.
T Consensus 991 ~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~ii---ff~~~~~~~~~-~~~~~~~~~~~~~~~v~~vnl~ 1066 (1178)
T PLN03190 991 KDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVV---FFVPLFAYWAS-TIDGSSIGDLWTLAVVILVNLH 1066 (1178)
T ss_pred ccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHH---HHHHHHHhcCC-CcCceeEhHhhhhHHHHHHHHH
Confidence 45555677889887531 112 22233345554432 22222222111 1111122344555555555444
Q ss_pred HHHHhcCCcccccccchHHHHHHHHHHHHHHHHhhhcc-cc---ccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045750 711 IHLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIPFTA-IG---DVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYIL 786 (792)
Q Consensus 711 ~~~~r~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p-l~---~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~ 786 (792)
++ ..+++|+++... .+++++++.++..++....| .. .++.+. -.+.+|+.+++..++.++++.++|.+.+.
T Consensus 1067 i~-~~~~~wt~~~~~---~i~~Si~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~fwl~ill~~~~~l~p~~~~~~~~~~ 1141 (1178)
T PLN03190 1067 LA-MDIIRWNWITHA---AIWGSIVATFICVIVIDAIPTLPGYWAIFHIA-KTGSFWLCLLAIVVAALLPRFVVKVLYQY 1141 (1178)
T ss_pred HH-HHHhhhhHHHHH---HHHHHHHHHHHHHHHHHhcccchhHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 344344332221 11122222122211222222 11 222211 25678888888888888888888766553
No 17
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-90 Score=721.56 Aligned_cols=727 Identities=24% Similarity=0.364 Sum_probs=584.6
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
|+.++++|++++|+||+++.++.++|+..+.+++.|+| ||+|.++++++||||||+.++.|++||||++++++
T Consensus 103 I~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlR-------DGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~g 175 (942)
T KOG0205|consen 103 ICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLR-------DGKWSEQEASILVPGDILSIKLGDIIPADARLLEG 175 (942)
T ss_pred hheeeeecceeeeeeccccchHHHHHHhccCcccEEee-------cCeeeeeeccccccCceeeeccCCEecCccceecC
Confidence 46789999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCCCCChHHH
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEK 160 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~~~~~~~~ 160 (792)
+-+.||+|+|||||.|++|.+|++ +|+||++++|++.++|++||.+|+.|+-+..+.......+|++
T Consensus 176 D~LkiDQSAlTGESLpvtKh~gd~-------------vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqk 242 (942)
T KOG0205|consen 176 DPLKIDQSALTGESLPVTKHPGDE-------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQK 242 (942)
T ss_pred CccccchhhhcCCccccccCCCCc-------------eecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHH
Confidence 999999999999999999999976 9999999999999999999999999999999888777889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHH-HHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhh
Q 045750 161 GVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFG-ISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIR 239 (792)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e 239 (792)
.++.+..++++.+++.-++.+.+.+....-........ +.+++..+|.++|.++++.++.|+.+++++|.++|+..++|
T Consensus 243 VLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIE 322 (942)
T KOG0205|consen 243 VLTGIGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIE 322 (942)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHH
Confidence 99999887766554433333333333332223333334 44455559999999999999999999999999999999999
Q ss_pred cccceeEEEeccccccccCceEEEE--e-eCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceE
Q 045750 240 DMGTMDILCIDKTGTLTMDRAIMVN--H-LDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKK 316 (792)
Q Consensus 240 ~lg~v~~i~~DKTGTLT~~~~~v~~--~-~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~ 316 (792)
+|+.+|++|+|||||||.|++++.+ + +...+.++++++..|++.+ .....|.+|.|++..... -+..+..++.
T Consensus 323 emAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAs--r~en~DAID~A~v~~L~d--PKeara~ike 398 (942)
T KOG0205|consen 323 EMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARAS--RKENQDAIDAAIVGMLAD--PKEARAGIKE 398 (942)
T ss_pred HhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHh--hhcChhhHHHHHHHhhcC--HHHHhhCceE
Confidence 9999999999999999999999998 4 5577889999999988777 445668999999998854 3556788999
Q ss_pred eEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhc
Q 045750 317 LDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNE 396 (792)
Q Consensus 317 ~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (792)
++.+||++..||.+..+.++ +| ..+.++||+|+.+++.|+.- .+.++++.+.+++++++
T Consensus 399 vhF~PFnPV~Krta~ty~d~--dG-------~~~r~sKGAPeqil~l~~~~------------~~i~~~vh~~id~~AeR 457 (942)
T KOG0205|consen 399 VHFLPFNPVDKRTALTYIDP--DG-------NWHRVSKGAPEQILKLCNED------------HDIPERVHSIIDKFAER 457 (942)
T ss_pred EeeccCCccccceEEEEECC--CC-------CEEEecCCChHHHHHHhhcc------------CcchHHHHHHHHHHHHh
Confidence 99999999999999988875 55 78899999999999999754 35678888999999999
Q ss_pred cCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q 045750 397 GLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVG 476 (792)
Q Consensus 397 g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~g 476 (792)
|+|-+++|++..++... +.-...+.|+|+.-+-||||.++.++|++....|+.|.|+|||...-++..++++|
T Consensus 458 GlRSLgVArq~v~e~~~-------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlg 530 (942)
T KOG0205|consen 458 GLRSLAVARQEVPEKTK-------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (942)
T ss_pred cchhhhhhhhccccccc-------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhc
Confidence 99999999988764322 12344578999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccchhh-----hccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 477 IRTTHVSTGPDL-----ELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 477 i~~~~~~~g~~~-----~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
...+.-.+++-+ .++.....++.+.+..-|+.+.|+||.++|+.+|+++ +.|+|+|||+||+|+++.||+|||+
T Consensus 531 mgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~-hi~gmtgdgvndapaLKkAdigiav 609 (942)
T KOG0205|consen 531 MGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERK-HIVGMTGDGVNDAPALKKADIGIAV 609 (942)
T ss_pred cccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcC-ceecccCCCcccchhhcccccceee
Confidence 965443333322 2233345677778888999999999999999999999 9999999999999999999999999
Q ss_pred cCCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCchHHHHHHHHHHh
Q 045750 552 DSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLS-LLIATMFLQTDPLTPKQLLTQNFLY 630 (792)
Q Consensus 552 ~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~ 630 (792)
..+++.++.++|+|+.++.++.+..++..+|.+|+|++.+..|.++..+-.++. .++..+ ..+.|+|...+++.++.
T Consensus 610 a~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfml~alI--w~~df~pfmvliiailn 687 (942)
T KOG0205|consen 610 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALI--WEFDFSPFMVLIIAILN 687 (942)
T ss_pred ccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999998888765433 333322 23568899999999999
Q ss_pred hhhhhhcccCCCCccccCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHhhhc-------ccchHHHHHHHHHHHH
Q 045750 631 SVGQIAIPWDKMEGDYVKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYEAY-------NQMNVVFFRSAWFVEG 703 (792)
Q Consensus 631 ~~~~~~~~~~~~~~~~m~~p~~~~~~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~~~-------~~~~~~~~~t~~f~~l 703 (792)
|.+.+.+++|...+. ..|..|+.+.++...++.|.++++.....|+......... ...+........|+.+
T Consensus 688 d~t~mtis~d~v~ps--p~pdswkl~~ifatgvVlgtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqv 765 (942)
T KOG0205|consen 688 DGTIMTISKDRVKPS--PTPDSWKLKEIFATGVVLGTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQV 765 (942)
T ss_pred CCceEEEEcccCCCC--CCCcccchhhhheeeeEehhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhh
Confidence 988888888877643 5788999999999889999887766544332221111000 1112334445567777
Q ss_pred HHHHHHHHHHHhcCCcccccccchHHHHHHHHHHHHHHHHhhhccccccccccccChhHHHHHHHHHHHHHHHHHHHHHH
Q 045750 704 LLMQTLIIHLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIPFTAIGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRI 783 (792)
Q Consensus 704 v~~q~~~~~~~r~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~pl~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~ 783 (792)
.+....++|..|++.|+| ..++.+.+..+++....+..++....--.+-+.....|.|-...+++.+..+.+....|..
T Consensus 766 si~sqaliFvtrsr~w~~-~erpg~~L~~af~~aqliatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~ 844 (942)
T KOG0205|consen 766 SIISQALIFVTRSRSWSF-VERPGWLLLIAFFAAQLIATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFI 844 (942)
T ss_pred eehhceeeEEEeccCCcc-ccCcHHHHHHHHHHHHHHHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhhee
Confidence 777777778888876555 4467888877777665555444322111112233345554333445555555555555544
Q ss_pred HH
Q 045750 784 YI 785 (792)
Q Consensus 784 ~~ 785 (792)
.+
T Consensus 845 ~~ 846 (942)
T KOG0205|consen 845 IR 846 (942)
T ss_pred hh
Confidence 33
No 18
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=5.8e-87 Score=749.02 Aligned_cols=512 Identities=23% Similarity=0.301 Sum_probs=427.1
Q ss_pred EEehHhHHHHHH----HHhHHHHHHHHhccCCC-CeE-EEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEE
Q 045750 4 LVLISVCLRFYQ----EYGSSKAAMKLSEFVRC-PIK-VQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRL 77 (792)
Q Consensus 4 ~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~-~~~-v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~l 77 (792)
+++++.+++.|+ |+|+++++++|+++.++ +++ |.| ||++++|++++|+|||+|.+++||+|||||++
T Consensus 71 ~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~r-------dg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~v 143 (673)
T PRK14010 71 ILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQ-------DGSYEMIDASDLKKGHIVRVATGEQIPNDGKV 143 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEe-------CCEEEEEEHHHcCCCCEEEECCCCcccCCeEE
Confidence 445566666666 78999999999999876 675 667 99999999999999999999999999999999
Q ss_pred EEeCCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCC
Q 045750 78 LTSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPD 156 (792)
Q Consensus 78 l~~~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~ 156 (792)
++|.. .||||+|||||.|+.|.+|. |+++ +|+||.+.+|++.++|+++|.+|++|++.+.++..+ +++
T Consensus 144 ieG~~-~VDESaLTGES~PV~K~~g~---------d~~~-V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~kt 212 (673)
T PRK14010 144 IKGLA-TVDESAITGESAPVIKESGG---------DFDN-VIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKT 212 (673)
T ss_pred EEcce-EEecchhcCCCCceeccCCC---------ccCe-eecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCC
Confidence 99976 99999999999999999872 1223 999999999999999999999999999999887643 567
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccch
Q 045750 157 DFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLG 236 (792)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~ 236 (792)
++|.....+...++.+.++++ +++..+....++...+...++++++++||+|+..+++.+..|+.+|+|+|+++|+.+
T Consensus 213 p~e~~l~~l~~~l~ii~l~~~--~~~~~~~~~~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~ 290 (673)
T PRK14010 213 PNEIALFTLLMTLTIIFLVVI--LTMYPLAKFLNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGR 290 (673)
T ss_pred HHHHHHHHHHHHHhHHHHHHH--HHHHHHHhhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcH
Confidence 788666555443333222222 111111111234456677788888899999999999999999999999999999999
Q ss_pred hhhcccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceE
Q 045750 237 AIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKK 316 (792)
Q Consensus 237 ~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~ 316 (792)
++|++|++|++|||||||||+|++.+.++.+..+.+.++++..+..+ +..+.||.++|+++++++.+.... ...
T Consensus 291 avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~~~~ll~~a~~~---~~~s~~P~~~AIv~~a~~~~~~~~---~~~ 364 (673)
T PRK14010 291 SVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKAAYES---SIADDTPEGRSIVKLAYKQHIDLP---QEV 364 (673)
T ss_pred HHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCccHHHHHHHHHHh---cCCCCChHHHHHHHHHHHcCCCch---hhh
Confidence 99999999999999999999988888887766666666777766443 345679999999999987665321 112
Q ss_pred eEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhc
Q 045750 317 LDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNE 396 (792)
Q Consensus 317 ~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (792)
.+.+||++++|++++.++ + . .+.||+++.++++|+.. |...+ . ++.+..++++++
T Consensus 365 ~~~~pF~~~~k~~gv~~~-----g-------~--~i~kGa~~~il~~~~~~-----g~~~~--~----~~~~~~~~~a~~ 419 (673)
T PRK14010 365 GEYIPFTAETRMSGVKFT-----T-------R--EVYKGAPNSMVKRVKEA-----GGHIP--V----DLDALVKGVSKK 419 (673)
T ss_pred cceeccccccceeEEEEC-----C-------E--EEEECCHHHHHHHhhhc-----CCCCc--h----HHHHHHHHHHhC
Confidence 345899999999998653 1 2 45599999999999742 21111 1 244556778899
Q ss_pred cCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q 045750 397 GLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVG 476 (792)
Q Consensus 397 g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~g 476 (792)
|+|+++++. |++++|+++++||+|||++++|++||++||+++|+|||++.+|.++|+++|
T Consensus 420 G~~~l~v~~--------------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elG 479 (673)
T PRK14010 420 GGTPLVVLE--------------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG 479 (673)
T ss_pred CCeEEEEEE--------------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 999998753 458999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcH
Q 045750 477 IRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGAS 556 (792)
Q Consensus 477 i~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~ 556 (792)
+++ +|+|++|+||.++|+.+|++| +.|+|+|||.||+|+|++||||||||+|++
T Consensus 480 I~~-------------------------v~A~~~PedK~~iV~~lQ~~G-~~VaMtGDGvNDAPALa~ADVGIAMgsGTd 533 (673)
T PRK14010 480 VDR-------------------------FVAECKPEDKINVIREEQAKG-HIVAMTGDGTNDAPALAEANVGLAMNSGTM 533 (673)
T ss_pred Cce-------------------------EEcCCCHHHHHHHHHHHHhCC-CEEEEECCChhhHHHHHhCCEEEEeCCCCH
Confidence 974 899999999999999999999 999999999999999999999999999999
Q ss_pred HHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045750 557 VAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMF 612 (792)
Q Consensus 557 ~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~ 612 (792)
.+|++||+|+++||+..|.+++++||++|.|+++++.|.++.|+..++..+.+.+.
T Consensus 534 vAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~ 589 (673)
T PRK14010 534 SAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFM 589 (673)
T ss_pred HHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999887776665443
No 19
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.8e-85 Score=736.10 Aligned_cols=502 Identities=23% Similarity=0.284 Sum_probs=427.1
Q ss_pred EehHhHHHHHHHHhHHHHHHHHhccCCC-CeEEEecCCccccCCe-EEEEecCCCCCCcEEEECCCCeecccEEEEEeCC
Q 045750 5 VLISVCLRFYQEYGSSKAAMKLSEFVRC-PIKVQRCAGRVVQSEL-IVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH 82 (792)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~v~r~~~~~~~~g~-~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~ 82 (792)
+++...++.++|+|+++++++|+++.++ +++|+| +|+ +++|++++|++||+|.+++||+|||||++++|.
T Consensus 76 vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir-------~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~- 147 (679)
T PRK01122 76 VLFANFAEALAEGRGKAQADSLRGAKKDTFARKLR-------EPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV- 147 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEE-------CCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-
Confidence 4556677889999999999999999875 699999 776 899999999999999999999999999999997
Q ss_pred eEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHHH
Q 045750 83 LVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKG 161 (792)
Q Consensus 83 ~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~~ 161 (792)
..||||++||||.|+.|.+|++ + +.+|+||.+.+|++.++|+++|.+|.+|++.+.++.. +.+++++..
T Consensus 148 a~VDESaLTGES~PV~K~~G~~---------~-~~V~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~a 217 (679)
T PRK01122 148 ASVDESAITGESAPVIRESGGD---------F-SSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIA 217 (679)
T ss_pred EEEEcccccCCCCceEeCCCCc---------c-CeEEeceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHH
Confidence 5999999999999999998843 1 3399999999999999999999999999999888764 345778887
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhcc
Q 045750 162 VRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDM 241 (792)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~l 241 (792)
.+.+...++.++++.++.++.+.++.+.. .++..++++++++|||+++...+.....++.+|+|+|+++|+.+++|+|
T Consensus 218 l~~l~~~l~~i~l~~~~~~~~~~~~~g~~--~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~l 295 (679)
T PRK01122 218 LTILLAGLTIIFLLVVATLPPFAAYSGGA--LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAA 295 (679)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHhCch--HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHh
Confidence 77766555544444333333332222223 3788889999999999999999999999999999999999999999999
Q ss_pred cceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHh-cCcccccccceEeEEe
Q 045750 242 GTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYT-NGYRFQASKWKKLDEI 320 (792)
Q Consensus 242 g~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~-~~~~~~~~~~~~~~~~ 320 (792)
|++|++|||||||||+|+|.++++++.++.+.++++..+..+ +..+.||.++|+++++++ .+.......++..+.+
T Consensus 296 g~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~a~~~---s~~s~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~ 372 (679)
T PRK01122 296 GDVDTLLLDKTGTITLGNRQASEFLPVPGVTEEELADAAQLS---SLADETPEGRSIVVLAKQRFNLRERDLQSLHATFV 372 (679)
T ss_pred cCCCEEEEeCCCCCcCCcEEEEEEEeCCCCCHHHHHHHHHHh---cCCCCCchHHHHHHHHHhhcCCCchhhccccceeE
Confidence 999999999999999999999999887777777888777544 345578999999999876 2433222235567889
Q ss_pred CCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCee
Q 045750 321 PFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRV 400 (792)
Q Consensus 321 ~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rv 400 (792)
||++.++++++.++ + ..+.||++|.+++.|... |... .+++.+..++++++|.|+
T Consensus 373 pF~s~~~~~gv~~~-------------g-~~~~kGa~e~il~~~~~~-----g~~~------~~~~~~~~~~~a~~G~~~ 427 (679)
T PRK01122 373 PFSAQTRMSGVDLD-------------G-REIRKGAVDAIRRYVESN-----GGHF------PAELDAAVDEVARKGGTP 427 (679)
T ss_pred eecCcCceEEEEEC-------------C-EEEEECCHHHHHHHHHhc-----CCcC------hHHHHHHHHHHHhCCCcE
Confidence 99999888887542 1 368999999999999632 2111 245666778899999999
Q ss_pred EEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q 045750 401 IGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT 480 (792)
Q Consensus 401 l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~ 480 (792)
+++|+ |++++|+++++|++|||++++|++||++||+++|+|||++.+|.++|+++|+++
T Consensus 428 l~va~--------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~- 486 (679)
T PRK01122 428 LVVAE--------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD- 486 (679)
T ss_pred EEEEE--------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-
Confidence 99985 358999999999999999999999999999999999999999999999999965
Q ss_pred ccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHh
Q 045750 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKD 560 (792)
Q Consensus 481 ~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~ 560 (792)
+++|++|+||.++|+.+|++| +.|+|+|||.||+|+|++||||||||+|++.+|+
T Consensus 487 ------------------------v~A~~~PedK~~iV~~lQ~~G-~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAke 541 (679)
T PRK01122 487 ------------------------FLAEATPEDKLALIRQEQAEG-RLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKE 541 (679)
T ss_pred ------------------------EEccCCHHHHHHHHHHHHHcC-CeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHH
Confidence 899999999999999999999 9999999999999999999999999999999999
Q ss_pred hcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHH
Q 045750 561 LADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANL 600 (792)
Q Consensus 561 ~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~ 600 (792)
+||+|+++||+..|.+++++||++.-+--..-.|++..-+
T Consensus 542 AADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 542 AGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred hCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999998554455677766444
No 20
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-83 Score=700.60 Aligned_cols=729 Identities=23% Similarity=0.303 Sum_probs=539.6
Q ss_pred EEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECC-CCeecccEEEEEeC
Q 045750 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEP-GDLFPGDVRLLTSK 81 (792)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~-G~~iPaD~~ll~~~ 81 (792)
++...+.....||.++.++.+.++-.. +.+|+|+| ||.|++|+++|||||||+.+.+ |-..|||+++++|+
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R-------~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~ 293 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIR-------DGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD 293 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEE-------CCEEEEEeccccccccEEEECCCCeEeecceEEEeCc
Confidence 345567788888888888876665554 46889999 9999999999999999999998 88999999999998
Q ss_pred CeEEEeccccCCCcccccccccccC------CCCCCCcccceEeeccEEee------eeEEEEEEeeccccHHHHHHhhh
Q 045750 82 HLVVSQSSLTGESWTAEKTADIRED------HCTPLLDLKNICFMGTNVVS------GSGTGLVVSTGSKTYTSTMFSTI 149 (792)
Q Consensus 82 ~~~Vdes~ltGEs~p~~k~~~~~~~------~~~~~~~~~~~v~~Gt~v~~------g~~~~~V~~tG~~t~~~~~~~~~ 149 (792)
+ .||||+|||||.|+.|.+.+... ......+.+|.+|+||++++ +.+.++|++||.+|..|++.+.+
T Consensus 294 c-ivNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsi 372 (1140)
T KOG0208|consen 294 C-IVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSI 372 (1140)
T ss_pred E-EeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhh
Confidence 5 89999999999999999875221 12234577899999999986 44899999999999999999999
Q ss_pred cCCCCC-ChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhc
Q 045750 150 GKQKPP-DDFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARD 228 (792)
Q Consensus 150 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~ 228 (792)
-.+++. .++-+..-++...+.+++++..+...+.....+.+....+.+++.++...+|++||.++++....+..|+.|+
T Consensus 373 lyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk 452 (1140)
T KOG0208|consen 373 LYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKK 452 (1140)
T ss_pred cCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhc
Confidence 876643 3444444444444444444443344444445667888999999999999999999999999999999999999
Q ss_pred CCccccchhhhcccceeEEEeccccccccCceEEEEeeCCCCC---------------------------Cc--HHHHHH
Q 045750 229 RCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGF---------------------------PK--ENVLRF 279 (792)
Q Consensus 229 ~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~---------------------------~~--~~~l~~ 279 (792)
||.|-++..+...|++|++|||||||||++.+.+..+.+..+. .+ ......
T Consensus 453 ~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~ 532 (1140)
T KOG0208|consen 453 GIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAM 532 (1140)
T ss_pred CeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHH
Confidence 9999999999999999999999999999999999877542210 00 123344
Q ss_pred HHhhccc---cCCCCCchHHHHHHHHH--------------hcC----------------ccc-ccccceEeEEeCCCCC
Q 045750 280 AFLNSYY---KTDQKYPLDDAILAYVY--------------TNG----------------YRF-QASKWKKLDEIPFDFV 325 (792)
Q Consensus 280 a~~~~~~---~~~~~~p~~~al~~~~~--------------~~~----------------~~~-~~~~~~~~~~~~f~~~ 325 (792)
|.||+.. ..-.+||+|.-+.+.-. +.+ ... ....+.+++.+||+|.
T Consensus 533 atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~ 612 (1140)
T KOG0208|consen 533 ATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSA 612 (1140)
T ss_pred hhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchh
Confidence 5555432 12346776554443210 000 000 1125788999999999
Q ss_pred CCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEE
Q 045750 326 RRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAV 405 (792)
Q Consensus 326 ~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~ 405 (792)
-+||||++.+++. . ...+|+|||||.|.+.|+.. ...+++++..++|+.+|+|++++|+
T Consensus 613 LrRMSVIv~~~~e-~-------~~~~ftKGaPE~I~~ic~p~-------------tvP~dy~evl~~Yt~~GfRVIAlA~ 671 (1140)
T KOG0208|consen 613 LRRMSVIVSTGGE-D-------KMMVFTKGAPESIAEICKPE-------------TVPADYQEVLKEYTHQGFRVIALAS 671 (1140)
T ss_pred hheEEEEEecCCC-C-------ceEeeccCCHHHHHHhcCcc-------------cCCccHHHHHHHHHhCCeEEEEEec
Confidence 9999999998643 2 78999999999999999854 1234577888999999999999999
Q ss_pred EecCCC-ccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC------
Q 045750 406 KRLLPQ-KSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR------ 478 (792)
Q Consensus 406 ~~~~~~-~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~------ 478 (792)
|+++.. -.......++.+|+|++|+|++.|++++|++++.+|++|+++.||.+|+||||..||..+||+||+-
T Consensus 672 K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v 751 (1140)
T KOG0208|consen 672 KELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKV 751 (1140)
T ss_pred CccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeE
Confidence 998765 1123345788999999999999999999999999999999999999999999999999999999990
Q ss_pred ---------------------------------------------------CCccccchhhhcc---CHHHHHHhhhcce
Q 045750 479 ---------------------------------------------------TTHVSTGPDLELL---SQESFHERVKRAT 504 (792)
Q Consensus 479 ---------------------------------------------------~~~~~~g~~~~~~---~~~~~~~~~~~~~ 504 (792)
....++|+.+..+ ..+.++.++.+..
T Consensus 752 ~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~ 831 (1140)
T KOG0208|consen 752 IIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGT 831 (1140)
T ss_pred EEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCe
Confidence 0123344443322 3566777888999
Q ss_pred EEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHhHHh
Q 045750 505 VLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVT 584 (792)
Q Consensus 505 v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~ 584 (792)
||||++|+||.++++.+|+.| +.|+|+|||+||+.|||+||+||+.+.+ +|.-+|.++-.-.+.+.+.+.|++||+.
T Consensus 832 VfARMsP~qK~~Lie~lQkl~-y~VgfCGDGANDCgALKaAdvGISLSea--EASvAApFTSk~~~I~cVp~vIrEGRaA 908 (1140)
T KOG0208|consen 832 VFARMSPDQKAELIEALQKLG-YKVGFCGDGANDCGALKAADVGISLSEA--EASVAAPFTSKTPSISCVPDVIREGRAA 908 (1140)
T ss_pred EEeecCchhHHHHHHHHHhcC-cEEEecCCCcchhhhhhhcccCcchhhh--hHhhcCccccCCCchhhHhHHHhhhhhh
Confidence 999999999999999999999 9999999999999999999999999743 4666788887777999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhhh-hhhhcccCCCCccccCCCCCCCC--CCcchh
Q 045750 585 FGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSV-GQIAIPWDKMEGDYVKTPQIWSE--NGLPMF 661 (792)
Q Consensus 585 ~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~m~~p~~~~~--~~l~~~ 661 (792)
+......++|...|.+.....+++ +++.-..++..|.+++.++..+ .++.+++..+...+-..||..+. +..+..
T Consensus 909 LVTSf~~FkYMalYs~iqFisv~~--LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L~s~~~~~~ 986 (1140)
T KOG0208|consen 909 LVTSFACFKYMALYSAIQFISVVF--LYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNLLSKKILVP 986 (1140)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhhe--eeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccccccchhhh
Confidence 999999999999998876555443 4455567899999999999885 47888887777777655444322 222222
Q ss_pred hhhhhhHHHHHHHHHHHHH----HHHh-hhcccch-HHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-cchHHHHHHH
Q 045750 662 ILFNGPVCILCDVTALFFL----WFYY-EAYNQMN-VVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQE-VASWPVLSST 734 (792)
Q Consensus 662 ~~~~g~~~a~~~~~~~~~~----~~~~-~~~~~~~-~~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~~-~~n~~l~~~~ 734 (792)
.+...+...+.++..++.. |+.. ......+ .+...|..|+.. .+|........+.+.||.++ |.|+.+....
T Consensus 987 l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS-~fqYi~~a~v~S~g~pfr~pl~~n~~f~~~i 1065 (1140)
T KOG0208|consen 987 LLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVS-SFQYIFIALVLSKGSPFRRPLWKNVLFKVFI 1065 (1140)
T ss_pred hHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehh-HHHHHHhheeeccCCcccCchhcCceeeeeh
Confidence 2222222222222211111 2221 0111111 223334445544 45666666677788888886 6777665554
Q ss_pred HHHHHHHHHhhhcc----ccccccccccChhHHHHHH
Q 045750 735 LVISAIGIAIPFTA----IGDVMGFTELPLTYFGFLL 767 (792)
Q Consensus 735 ~~~~~l~~~~~~~p----l~~~f~~~~l~~~~w~~~l 767 (792)
.+.......++.++ ....+++.+.+-....+.+
T Consensus 1066 ~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~~~~~fii 1102 (1140)
T KOG0208|consen 1066 TVIILSTIYLLFVNYLFIEWKLLQLTYIPTTFDRFII 1102 (1140)
T ss_pred hhHHhhhhhhhhccccchhhhhhceeccCcchhHHHH
Confidence 44444444555544 2234778887764443333
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=8.3e-82 Score=706.12 Aligned_cols=507 Identities=22% Similarity=0.271 Sum_probs=428.8
Q ss_pred EehHhHHHHHHHHhHHHHHHHHhccCCCC-eEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCCe
Q 045750 5 VLISVCLRFYQEYGSSKAAMKLSEFVRCP-IKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHL 83 (792)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~~ 83 (792)
+++...++.++|+|+++++++|+++.++. ++|+|. ||++++|++++|+|||+|.+++||+|||||++++|. +
T Consensus 77 vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~------dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~ 149 (675)
T TIGR01497 77 VLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRD------DGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-A 149 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEee------CCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-E
Confidence 45666777799999999999999998764 778752 789999999999999999999999999999999996 5
Q ss_pred EEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHHHH
Q 045750 84 VVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKGV 162 (792)
Q Consensus 84 ~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~~~ 162 (792)
.||||++||||.|+.|.+|+.. +.+|+||.+.+|++.++|+++|.+|++|++.+.++.. .+++++|...
T Consensus 150 ~VDESaLTGES~PV~K~~g~~~----------~~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l 219 (675)
T TIGR01497 150 SVDESAITGESAPVIKESGGDF----------ASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIAL 219 (675)
T ss_pred EEEcccccCCCCceeecCCCCc----------ceeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHH
Confidence 9999999999999999998531 2399999999999999999999999999999988754 3467888887
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhccc
Q 045750 163 RRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDMG 242 (792)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~lg 242 (792)
+.+..++..+.++.+..++.+..+.+ ....+...+++++++|||+++...+.....++.+|+|+|+++|+..++|++|
T Consensus 220 ~~l~~~l~~v~li~~~~~~~~~~~~~--~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg 297 (675)
T TIGR01497 220 TILLIALTLVFLLVTATLWPFAAYGG--NAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACG 297 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC--hhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhh
Confidence 77766555443333322222211111 2235777789999999999887777777789999999999999999999999
Q ss_pred ceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEeCC
Q 045750 243 TMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPF 322 (792)
Q Consensus 243 ~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~f 322 (792)
++|++|||||||||+|+|++.++++..+.+.+++++.+.++ +..+.||.++|+++++++.|.......+...+..||
T Consensus 298 ~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~aa~~---~~~s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf 374 (675)
T TIGR01497 298 DVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTLADAAQLA---SLADDTPEGKSIVILAKQLGIREDDVQSLHATFVEF 374 (675)
T ss_pred CCCEEEECCCCcccCCCeEEEEEEecCCCcHHHHHHHHHHh---cCCCCCcHHHHHHHHHHHcCCCccccccccceEEEE
Confidence 99999999999999999999999877777778888877553 445689999999999987765543333455678999
Q ss_pred CCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEE
Q 045750 323 DFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIG 402 (792)
Q Consensus 323 ~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~ 402 (792)
++.++++++.+.+ ...+.||++|.+++.|... |... ..++.+..++++++|.|+++
T Consensus 375 ~~~~~~sg~~~~~-------------g~~~~kGa~e~i~~~~~~~-----g~~~------~~~~~~~~~~~a~~G~r~l~ 430 (675)
T TIGR01497 375 TAQTRMSGINLDN-------------GRMIRKGAVDAIKRHVEAN-----GGHI------PTDLDQAVDQVARQGGTPLV 430 (675)
T ss_pred cCCCcEEEEEEeC-------------CeEEEECCHHHHHHHHHhc-----CCCC------cHHHHHHHHHHHhCCCeEEE
Confidence 9998777664421 1368899999999988522 2111 13456667889999999999
Q ss_pred EEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCcc
Q 045750 403 VAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHV 482 (792)
Q Consensus 403 ~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~ 482 (792)
+|++ .+++|+++++|++||+++++|++||++|++++|+|||+..+|.++|+++|+++
T Consensus 431 va~~--------------------~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~--- 487 (675)
T TIGR01497 431 VCED--------------------NRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD--- 487 (675)
T ss_pred EEEC--------------------CEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE---
Confidence 9963 38999999999999999999999999999999999999999999999999975
Q ss_pred ccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhc
Q 045750 483 STGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLA 562 (792)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~a 562 (792)
++++++|++|.++++.+|++| +.|+|+|||.||+|||++||+||||++|++.++++|
T Consensus 488 ----------------------v~a~~~PedK~~~v~~lq~~g-~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaa 544 (675)
T TIGR01497 488 ----------------------FIAEATPEDKIALIRQEQAEG-KLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAA 544 (675)
T ss_pred ----------------------EEcCCCHHHHHHHHHHHHHcC-CeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhC
Confidence 899999999999999999999 899999999999999999999999999999999999
Q ss_pred CEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHH
Q 045750 563 DIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGV 603 (792)
Q Consensus 563 d~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~ 603 (792)
|++++++|+..|.+++++||+++.+-.....|++..++.-.
T Consensus 545 divLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~ 585 (675)
T TIGR01497 545 NMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKY 585 (675)
T ss_pred CEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHH
Confidence 99999999999999999999999988888899988776543
No 22
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-81 Score=699.28 Aligned_cols=494 Identities=26% Similarity=0.338 Sum_probs=428.7
Q ss_pred ehHhHHHHHHHH---hHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC
Q 045750 6 LISVCLRFYQEY---GSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH 82 (792)
Q Consensus 6 ~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~ 82 (792)
++-.+.+++|++ |+.+++++|.++.|+++++.+. ||++++||.++|++||+|.|+|||+||+||+|++|++
T Consensus 182 ~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~------~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s 255 (713)
T COG2217 182 FLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRG------DGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS 255 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEec------CCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE
Confidence 334444555555 5666777888888999988873 4458999999999999999999999999999999998
Q ss_pred eEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHHH
Q 045750 83 LVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKG 161 (792)
Q Consensus 83 ~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~~ 161 (792)
.||||++||||.|+.|.+|++ |++||.+.+|.....|+++|.+|.++++.+.+++. ..+.+.|+.
T Consensus 256 -~vDeS~iTGEs~PV~k~~Gd~-------------V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrl 321 (713)
T COG2217 256 -SVDESMLTGESLPVEKKPGDE-------------VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRL 321 (713)
T ss_pred -EeecchhhCCCCCEecCCCCE-------------EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHH
Confidence 999999999999999999966 99999999999999999999999999999998764 356789999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccc-cchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhc
Q 045750 162 VRRISFVLICVMLIVATIIILIDYFTS-KNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240 (792)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~ 240 (792)
.++++.++++..++++.+.+++|++.. .+|..++..++++++++|||+|.+++|+++..+..+.+|+|+++|+..++|.
T Consensus 322 aDr~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~ 401 (713)
T COG2217 322 ADRVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALER 401 (713)
T ss_pred HHHHHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHh
Confidence 999999999988888888777777666 5799999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEe
Q 045750 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEI 320 (792)
Q Consensus 241 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~ 320 (792)
++++|+++||||||||+|+|++.++...++ +++++|++| +..|..+.||+.+||+++++..+.. .....+.+
T Consensus 402 l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-~e~~~L~la---AalE~~S~HPiA~AIv~~a~~~~~~----~~~~~~~i 473 (713)
T COG2217 402 LAKVDTVVFDKTGTLTEGKPEVTDVVALDG-DEDELLALA---AALEQHSEHPLAKAIVKAAAERGLP----DVEDFEEI 473 (713)
T ss_pred hccCCEEEEeCCCCCcCCceEEEEEecCCC-CHHHHHHHH---HHHHhcCCChHHHHHHHHHHhcCCC----Cccceeee
Confidence 999999999999999999999999998877 788899888 5678899999999999999876621 11123344
Q ss_pred CCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCee
Q 045750 321 PFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRV 400 (792)
Q Consensus 321 ~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rv 400 (792)
| .+.+...+. ...+..|+++.+.+.-... +. ..+..+.+..+|..+
T Consensus 474 ~----G~Gv~~~v~--------------g~~v~vG~~~~~~~~~~~~-----------~~-----~~~~~~~~~~~G~t~ 519 (713)
T COG2217 474 P----GRGVEAEVD--------------GERVLVGNARLLGEEGIDL-----------PL-----LSERIEALESEGKTV 519 (713)
T ss_pred c----cCcEEEEEC--------------CEEEEEcCHHHHhhcCCCc-----------cc-----hhhhHHHHHhcCCeE
Confidence 4 222322221 1356678887765422111 00 233456778889888
Q ss_pred EEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q 045750 401 IGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT 480 (792)
Q Consensus 401 l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~ 480 (792)
+.++. |.+++|+++++|++||+++++|++||+.|++++|+|||+..+|+++|+++||+.
T Consensus 520 v~va~--------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~- 578 (713)
T COG2217 520 VFVAV--------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE- 578 (713)
T ss_pred EEEEE--------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-
Confidence 88876 348999999999999999999999999999999999999999999999999975
Q ss_pred ccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHh
Q 045750 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKD 560 (792)
Q Consensus 481 ~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~ 560 (792)
+++++.|++|.++|+.+|+.| ++|+|+|||.||+|+|.+||||||||.|+|.+++
T Consensus 579 ------------------------v~AellPedK~~~V~~l~~~g-~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~e 633 (713)
T COG2217 579 ------------------------VRAELLPEDKAEIVRELQAEG-RKVAMVGDGINDAPALAAADVGIAMGSGTDVAIE 633 (713)
T ss_pred ------------------------heccCCcHHHHHHHHHHHhcC-CEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHH
Confidence 899999999999999999999 9999999999999999999999999999999999
Q ss_pred hcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHH
Q 045750 561 LADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLL 607 (792)
Q Consensus 561 ~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~ 607 (792)
+||+++++||+..+.++|+.+|+++.++++|+.|.+.+|...+....
T Consensus 634 aADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~ 680 (713)
T COG2217 634 AADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAA 680 (713)
T ss_pred hCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986654443
No 23
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-77 Score=636.29 Aligned_cols=722 Identities=22% Similarity=0.276 Sum_probs=538.6
Q ss_pred HhHHHHHHHHhccC--CCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECC---CCeecccEEEEEeCCeEEEecccc
Q 045750 17 YGSSKAAMKLSEFV--RCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEP---GDLFPGDVRLLTSKHLVVSQSSLT 91 (792)
Q Consensus 17 ~~~~~~~~~l~~~~--~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~---G~~iPaD~~ll~~~~~~Vdes~lt 91 (792)
+++.+.+.+++++- |..+.|+| +++|+.+.++||.|||+|.|.. ...||||.+++.|++ .|||++||
T Consensus 236 ~Qrm~~lse~R~Mg~kpy~I~v~R-------~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaMLt 307 (1160)
T KOG0209|consen 236 KQRMRTLSEFRTMGNKPYTINVYR-------NKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAMLT 307 (1160)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEe-------cCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhhc
Confidence 34556666666664 45678888 9999999999999999999976 467999999999986 89999999
Q ss_pred CCCcccccccccccCCCC----CCCcccceEeeccEEee-------------eeEEEEEEeeccccHHHHHHhhhcCCCC
Q 045750 92 GESWTAEKTADIREDHCT----PLLDLKNICFMGTNVVS-------------GSGTGLVVSTGSKTYTSTMFSTIGKQKP 154 (792)
Q Consensus 92 GEs~p~~k~~~~~~~~~~----~~~~~~~~v~~Gt~v~~-------------g~~~~~V~~tG~~t~~~~~~~~~~~~~~ 154 (792)
|||.|..|.+....+.+. .-.++.+++|.||++++ |.+.+.|++||.+|..|++.+.+-...+
T Consensus 308 GESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~ae 387 (1160)
T KOG0209|consen 308 GESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAE 387 (1160)
T ss_pred CCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecce
Confidence 999999998864433221 12346689999999984 5589999999999999999998864322
Q ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc-----cchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHh
Q 045750 155 ---PDDFEKGVRRISFVLICVMLIVATIIILIDYFTS-----KNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMA 226 (792)
Q Consensus 155 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~ 226 (792)
.+..+ +.+++.+.+++|++....-|.-+ .+-...++-++.++...+|+.||+-++++.-.+...++
T Consensus 388 rvTaNn~E------tf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALa 461 (1160)
T KOG0209|consen 388 RVTANNRE------TFIFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALA 461 (1160)
T ss_pred eeeeccHH------HHHHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHH
Confidence 22222 23334444455555443333222 22334566777788889999999999999999999999
Q ss_pred hcCCccccchhhhcccceeEEEeccccccccCceEEEEeeCCC----------CCCcHHHHHHHHhhcccc---CCCCCc
Q 045750 227 RDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSW----------GFPKENVLRFAFLNSYYK---TDQKYP 293 (792)
Q Consensus 227 ~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~----------~~~~~~~l~~a~~~~~~~---~~~~~p 293 (792)
|.+++|..|-.+.-.|++|+.|||||||||+..|.+.++-... ..+.+.++.+|+||+... .-.|||
T Consensus 462 k~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDP 541 (1160)
T KOG0209|consen 462 KLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDP 541 (1160)
T ss_pred HhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCCh
Confidence 9999999999999999999999999999999999999875421 224457888888887653 347999
Q ss_pred hHHHHHHHHHhcCcccc-----------cccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHH
Q 045750 294 LDDAILAYVYTNGYRFQ-----------ASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIK 362 (792)
Q Consensus 294 ~~~al~~~~~~~~~~~~-----------~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~ 362 (792)
.|+|.++.. |+... ....++.+.+.|+|..|||+++++.+..++ ...++..+|||||++.+
T Consensus 542 lEKA~l~~v---~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~-----s~k~~~aVKGAPEvi~~ 613 (1160)
T KOG0209|consen 542 LEKATLEAV---GWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGS-----SEKYFVAVKGAPEVIQE 613 (1160)
T ss_pred HHHHHHHhc---CcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCC-----ceEEEEEecCCHHHHHH
Confidence 999999876 44431 124677899999999999999998753221 13799999999999998
Q ss_pred hcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCcc-ccCCCCCCCCCCCcEEEEecccCCCCCh
Q 045750 363 VCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKS-AQSNRNDGPIESDMVFLGLITFYDPPKD 441 (792)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~-~~~~~~~~~~e~~l~~lG~i~~~d~~r~ 441 (792)
+.+.. .+++++.+.+|+++|.||++++||++..-.. +..+.+++++|+||+|.|++.|.-|+|+
T Consensus 614 ml~dv---------------P~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~ 678 (1160)
T KOG0209|consen 614 MLRDV---------------PKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKP 678 (1160)
T ss_pred HHHhC---------------chhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCc
Confidence 77655 3567778899999999999999999874322 2234678899999999999999999999
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC-------------------------------------------
Q 045750 442 SAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR------------------------------------------- 478 (792)
Q Consensus 442 ~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~------------------------------------------- 478 (792)
|++++|+++++.+++++|+|||++.||.++|+++|+.
T Consensus 679 Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~ 758 (1160)
T KOG0209|consen 679 DSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAET 758 (1160)
T ss_pred cHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhh
Confidence 9999999999999999999999999999999999992
Q ss_pred CCccccchhhhccCH-HHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHH
Q 045750 479 TTHVSTGPDLELLSQ-ESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASV 557 (792)
Q Consensus 479 ~~~~~~g~~~~~~~~-~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~ 557 (792)
.+..++|..++.+.. +.+.+.+..+.||||+.|.||..++..+++.| +.++|+|||.||+.+||+||||||.-+++.+
T Consensus 759 ~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~G-y~TLMCGDGTNDVGALK~AhVGVALL~~~~e 837 (1160)
T KOG0209|consen 759 HDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLG-YVTLMCGDGTNDVGALKQAHVGVALLNNPEE 837 (1160)
T ss_pred hhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcC-eEEEEecCCCcchhhhhhcccceehhcCChh
Confidence 123455666665543 34667778899999999999999999999999 9999999999999999999999998533320
Q ss_pred H-----------------------------------------------------------------------HhhcCEEe
Q 045750 558 A-----------------------------------------------------------------------KDLADIIL 566 (792)
Q Consensus 558 ~-----------------------------------------------------------------------~~~ad~vl 566 (792)
. .-+|-+.-
T Consensus 838 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTs 917 (1160)
T KOG0209|consen 838 SKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTS 917 (1160)
T ss_pred hhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCcccccccccccccccc
Confidence 0 00122222
Q ss_pred ccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhhhhhhhcccCCCCccc
Q 045750 567 LEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYSVGQIAIPWDKMEGDY 646 (792)
Q Consensus 567 ~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 646 (792)
...+.+.|.+.|++||++..+..++++......+...++. +.++....-|+..|.....+++....+.+...+|-+.+
T Consensus 918 K~asv~~v~~IIrQGRctLVtTlQMfKILALN~LisAYsl--SvlyldGVKfgD~QaTisGlLla~cFlfISrskPLetL 995 (1160)
T KOG0209|consen 918 KLASVSSVTHIIRQGRCTLVTTLQMFKILALNCLISAYSL--SVLYLDGVKFGDTQATISGLLLAACFLFISRSKPLETL 995 (1160)
T ss_pred ccchHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHH--HHhhhcCceecchhHhHHHHHHHHHHhheecCCchhhH
Confidence 3346778899999999999999999887655555444433 33555557789999999999988777888888887777
Q ss_pred cCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHhh--h------------cccchHHHHHHHHHHHHHHHHHHHHH
Q 045750 647 VKTPQIWSENGLPMFILFNGPVCILCDVTALFFLWFYYE--A------------YNQMNVVFFRSAWFVEGLLMQTLIIH 712 (792)
Q Consensus 647 m~~p~~~~~~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~--~------------~~~~~~~~~~t~~f~~lv~~q~~~~~ 712 (792)
.+..|.. .++..+.+..+. .++.+.+..+++.- . ......+...|..|+..+..|+.+ |
T Consensus 996 SkeRP~~---nIFN~Y~i~svl---~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsT-F 1068 (1160)
T KOG0209|consen 996 SKERPLP---NIFNVYIILSVL---LQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVST-F 1068 (1160)
T ss_pred hhcCCCC---CcchHHHHHHHH---HHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHH-h
Confidence 6554443 245555443332 23333322222211 1 111235667777777665656555 6
Q ss_pred HHhcCCcccccc-cchHHHHHHHHHHHHHHH--Hhhhcc-ccccccccccChhHH----HHHHHHHHHHHHHHHHHHHHH
Q 045750 713 LIRTEKIPFIQE-VASWPVLSSTLVISAIGI--AIPFTA-IGDVMGFTELPLTYF----GFLLLLFIGYFTVGQLVKRIY 784 (792)
Q Consensus 713 ~~r~~~~~~~~~-~~n~~l~~~~~~~~~l~~--~~~~~p-l~~~f~~~~l~~~~w----~~~l~~~~~~l~~~e~iK~~~ 784 (792)
.+.+++.||... +-|..++++++++..+.. +.-+.| ++..|.+.++|-.+- .++.+-.++++++..+.|++.
T Consensus 1069 AVNY~G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f 1148 (1160)
T KOG0209|consen 1069 AVNYQGRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFF 1148 (1160)
T ss_pred hhhccCcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 788889999887 568888888776654444 334456 999999999985553 333444556666666776654
Q ss_pred H
Q 045750 785 I 785 (792)
Q Consensus 785 ~ 785 (792)
.
T Consensus 1149 ~ 1149 (1160)
T KOG0209|consen 1149 G 1149 (1160)
T ss_pred c
Confidence 4
No 24
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-78 Score=631.81 Aligned_cols=734 Identities=20% Similarity=0.242 Sum_probs=541.9
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
.++++++.+.+..+++++.+.....++. ..++... +|.... +++++++||+|.+.++|+||||.+++.++
T Consensus 136 ~fvl~itl~keavdd~~r~~rd~~~Nse---~y~~ltr------~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTs 205 (1051)
T KOG0210|consen 136 GFVLTITLIKEAVDDLKRRRRDRELNSE---KYTKLTR------DGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTS 205 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhh---hheeecc------CCcccc-cccccccccEEEEecCCcCCcceEEEEcc
Confidence 3567788888998888888766655443 4455431 555444 99999999999999999999999999865
Q ss_pred C----eEEEeccccCCCccccccccccc----------------------------------CCCCCCCcccceEeeccE
Q 045750 82 H----LVVSQSSLTGESWTAEKTADIRE----------------------------------DHCTPLLDLKNICFMGTN 123 (792)
Q Consensus 82 ~----~~Vdes~ltGEs~p~~k~~~~~~----------------------------------~~~~~~~~~~~~v~~Gt~ 123 (792)
+ +.+-+-.|+||++-+.|-+.+.. ++..+.++-+|.++++|.
T Consensus 206 d~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTV 285 (1051)
T KOG0210|consen 206 DKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTV 285 (1051)
T ss_pred CCCCceEEeccccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeee
Confidence 4 78999999999987777553211 122346788999999999
Q ss_pred EeeeeEEEEEEeeccccHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHH
Q 045750 124 VVSGSGTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVAC 203 (792)
Q Consensus 124 v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 203 (792)
+.+|.++|+|+|||.+|+ ..++....+.+-..++..+|.+.++++.++++++++......+. ..|...+++++.++.
T Consensus 286 vAs~t~~gvVvYTG~dtR--svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~-~~wyi~~~RfllLFS 362 (1051)
T KOG0210|consen 286 VASGTAIGVVVYTGRDTR--SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG-SDWYIYIIRFLLLFS 362 (1051)
T ss_pred EecCcEEEEEEEecccHH--HHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC-CchHHHHHHHHHHHh
Confidence 999999999999999994 34555555555567888899999999999999988888777665 789999999999999
Q ss_pred HHhcchhHHHHHHHHHHHHHHHhhc----CCccccchhhhcccceeEEEeccccccccCceEEEEeeCCC----------
Q 045750 204 ALTPQMFPLIVNTSLAKGALAMARD----RCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSW---------- 269 (792)
Q Consensus 204 ~~~P~~l~~~~~~~~~~~~~~~~~~----~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~---------- 269 (792)
..+|.+|-..+.++.......+.++ |.++|+....|+||+++++.+|||||||+|+|.+.+++-..
T Consensus 363 ~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~e 442 (1051)
T KOG0210|consen 363 SIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDE 442 (1051)
T ss_pred hhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHH
Confidence 9999999999999888888887765 57899999999999999999999999999999998874211
Q ss_pred -----------C-C----------------CcHHHHHHHHhhcc---------ccCCCCCchHHHHHHHHHhcCccc---
Q 045750 270 -----------G-F----------------PKENVLRFAFLNSY---------YKTDQKYPLDDAILAYVYTNGYRF--- 309 (792)
Q Consensus 270 -----------~-~----------------~~~~~l~~a~~~~~---------~~~~~~~p~~~al~~~~~~~~~~~--- 309 (792)
+ . -.+.++.+|.||+. ..++..+|+|.|++++-...|..+
T Consensus 443 V~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~R 522 (1051)
T KOG0210|consen 443 VSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKR 522 (1051)
T ss_pred HHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeec
Confidence 0 0 01345667777643 234567999999999887777654
Q ss_pred ------------ccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCccc
Q 045750 310 ------------QASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITS 377 (792)
Q Consensus 310 ------------~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~ 377 (792)
....|+++..+||++++|||+++++++. ++ +...|.|||+.+|...-..
T Consensus 523 d~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~-~~-------evtfylKGAD~VMs~iVq~----------- 583 (1051)
T KOG0210|consen 523 DRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDET-TE-------EVTFYLKGADVVMSGIVQY----------- 583 (1051)
T ss_pred ccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCC-Cc-------eEEEEEecchHHHhccccc-----------
Confidence 3357999999999999999999999874 33 7899999998877553322
Q ss_pred CCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCC-------------------CCCCCCCcEEEEecccCCC
Q 045750 378 FTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRN-------------------DGPIESDMVFLGLITFYDP 438 (792)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~-------------------~~~~e~~l~~lG~i~~~d~ 438 (792)
.+.+++...+++++|+|++++|.|.+++++++..+.. ...+|+|+.++|+.+.||+
T Consensus 584 -----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDk 658 (1051)
T KOG0210|consen 584 -----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDK 658 (1051)
T ss_pred -----chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHH
Confidence 2345556678999999999999999987654332111 1257899999999999999
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC------------------------------CCCccccchhh
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI------------------------------RTTHVSTGPDL 488 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi------------------------------~~~~~~~g~~~ 488 (792)
++++++.+++.||++|||+||+|||..+||..+|+..++ +...+++|+.+
T Consensus 659 LQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl 738 (1051)
T KOG0210|consen 659 LQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESL 738 (1051)
T ss_pred HhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchH
Confidence 999999999999999999999999999999999999998 23567888877
Q ss_pred hccC---HHHHHHhhh--cceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe-cCCcHHHHhhc
Q 045750 489 ELLS---QESFHERVK--RATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV-DSGASVAKDLA 562 (792)
Q Consensus 489 ~~~~---~~~~~~~~~--~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~-~~~~~~~~~~a 562 (792)
+... ++++-++.+ ...++|||+|+||+++++.+|++.+..|++||||.||++|+++||+||++ |+...+|.-+|
T Consensus 739 ~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAA 818 (1051)
T KOG0210|consen 739 EFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAA 818 (1051)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhc
Confidence 6544 344444433 57899999999999999999998669999999999999999999999998 47778899999
Q ss_pred CEEeccCCchHHHHHH-HHhHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCch----HHHHHHHHHHhhhhhhhc
Q 045750 563 DIILLEKDLNVLVAGV-ERGRVTFGNTMKYIKMSIIANLGGVLSLLIATMFLQTDPLT----PKQLLTQNFLYSVGQIAI 637 (792)
Q Consensus 563 d~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~ 637 (792)
|+-+ +.|..+.+++ .|||..|+|..+.-+|.+...+.......+.+..+.|.|.. -..+.+..+.+.+|.+|+
T Consensus 819 DfSI--tqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSl 896 (1051)
T KOG0210|consen 819 DFSI--TQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSL 896 (1051)
T ss_pred cccH--HHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhhee
Confidence 9988 5699998888 79999999999999999999976655544444433333432 234556666666888888
Q ss_pred ccCCC--CccccCCCCCCCC----CCcchhhhhhhhHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHH
Q 045750 638 PWDKM--EGDYVKTPQIWSE----NGLPMFILFNGPVCILCDVTALFFLWFYYEAYNQMNVVFFRSAWFVEGLLMQTLII 711 (792)
Q Consensus 638 ~~~~~--~~~~m~~p~~~~~----~~l~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~ 711 (792)
..|.. +...+.+|+.|++ +.+...-.+..+..++++-.+...+.+..... +.....++.|..+++......
T Consensus 897 v~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~---ef~~ivaisFtaLi~tELiMV 973 (1051)
T KOG0210|consen 897 VLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDT---EFIHIVAISFTALILTELIMV 973 (1051)
T ss_pred eecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhh---hheEeeeeeeHHHHHHHHHHH
Confidence 87655 3335677888764 33322222222223333322221111111110 111123455777766666554
Q ss_pred HHHhcCCcccccccchHHHHHHHHHHHHHHHHhhhcc-ccccccccc-cChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045750 712 HLIRTEKIPFIQEVASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTE-LPLTYFGFLLLLFIGYFTVGQLVKRIYILI 787 (792)
Q Consensus 712 ~~~r~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~-l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~ 787 (792)
....+ .|.|.++.+-++.+.+.+ .+.| ++++|...- +++.|++-+.++.++.+++.+..|.++||.
T Consensus 974 aLtv~--------tw~~~m~vae~lsL~~Yi--vsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~ 1041 (1051)
T KOG0210|consen 974 ALTVR--------TWHWLMVVAELLSLALYI--VSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKL 1041 (1051)
T ss_pred hhhhh--------hhhHHHHHHHHHHHHHHH--HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33221 134555555444444433 3344 677665444 344444444556666677788888776653
No 25
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=9.2e-76 Score=680.64 Aligned_cols=493 Identities=26% Similarity=0.321 Sum_probs=429.7
Q ss_pred EEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC
Q 045750 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH 82 (792)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~ 82 (792)
+++++...++.++++|+++.+++|.++.|++++++| ||++++|++++|+|||+|.+++||+|||||+|++|+.
T Consensus 214 ~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir-------~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~ 286 (741)
T PRK11033 214 LLFLIGERLEGYAASRARRGVSALMALVPETATRLR-------DGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA 286 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEE-------CCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcE
Confidence 456677788888889999999999999999999999 9999999999999999999999999999999999975
Q ss_pred eEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHHH
Q 045750 83 LVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKG 161 (792)
Q Consensus 83 ~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~~ 161 (792)
.||||+|||||.|+.|.+|+ .||+||.+.+|.+.+.|+++|.+|.++++.+.+++. .+++++++.
T Consensus 287 -~vdes~lTGEs~Pv~k~~Gd-------------~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~ 352 (741)
T PRK11033 287 -SFDESALTGESIPVERATGE-------------KVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERF 352 (741)
T ss_pred -EeecccccCCCCCEecCCCC-------------eeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHH
Confidence 99999999999999999984 499999999999999999999999999999888763 346789999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhh-cccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhc
Q 045750 162 VRRISFVLICVMLIVATIIILID-YFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240 (792)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~ 240 (792)
+++++.++++++++++++.++++ ++.+.+|...+..++++++++|||+|.++.|+++..+..+++|+|+++|+.+++|+
T Consensus 353 ~d~~a~~~~~~v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~ 432 (741)
T PRK11033 353 IDRFSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQ 432 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHH
Confidence 99999999999888888887776 33456788899999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEe
Q 045750 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEI 320 (792)
Q Consensus 241 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~ 320 (792)
|+++|++|||||||||+|+|++.++.+.++.++++++.++. ..+..+.||+++|+++++++.+.. +
T Consensus 433 l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~aa---~~e~~s~hPia~Ai~~~a~~~~~~-----------~ 498 (741)
T PRK11033 433 LGRVTTVAFDKTGTLTEGKPQVTDIHPATGISESELLALAA---AVEQGSTHPLAQAIVREAQVRGLA-----------I 498 (741)
T ss_pred hhCCCEEEEeCCCCCcCCceEEEEEEecCCCCHHHHHHHHH---HHhcCCCCHHHHHHHHHHHhcCCC-----------C
Confidence 99999999999999999999999998777777888888773 456788999999999999766543 3
Q ss_pred CCCCCCCeEE-EEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCe
Q 045750 321 PFDFVRRKVS-VILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLR 399 (792)
Q Consensus 321 ~f~~~~k~~~-v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r 399 (792)
||.++++.+. .-++.. .++ . .+..|+++.+.+ +++ .+.+..+++..+|++
T Consensus 499 ~~~~~~~~~~g~Gv~~~-~~g-------~--~~~ig~~~~~~~---------------~~~----~~~~~~~~~~~~g~~ 549 (741)
T PRK11033 499 PEAESQRALAGSGIEGQ-VNG-------E--RVLICAPGKLPP---------------LAD----AFAGQINELESAGKT 549 (741)
T ss_pred CCCcceEEEeeEEEEEE-ECC-------E--EEEEecchhhhh---------------ccH----HHHHHHHHHHhCCCE
Confidence 5555555442 112211 111 2 234577776532 112 233445678899999
Q ss_pred eEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 045750 400 VIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT 479 (792)
Q Consensus 400 vl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~ 479 (792)
++++++ |.+++|+++++|++||+++++|++|+++|++++|+|||+..++.++|+++||+
T Consensus 550 ~v~va~--------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~- 608 (741)
T PRK11033 550 VVLVLR--------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID- 608 (741)
T ss_pred EEEEEE--------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-
Confidence 999997 34899999999999999999999999999999999999999999999999995
Q ss_pred CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHH
Q 045750 480 THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAK 559 (792)
Q Consensus 480 ~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~ 559 (792)
.+++..|++|.++++.+|+. +.|+|+|||.||+|||++||+||+||++++.++
T Consensus 609 -------------------------~~~~~~p~~K~~~v~~l~~~--~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~ 661 (741)
T PRK11033 609 -------------------------FRAGLLPEDKVKAVTELNQH--APLAMVGDGINDAPAMKAASIGIAMGSGTDVAL 661 (741)
T ss_pred -------------------------eecCCCHHHHHHHHHHHhcC--CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHH
Confidence 46778999999999999965 479999999999999999999999999999999
Q ss_pred hhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHH
Q 045750 560 DLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLL 607 (792)
Q Consensus 560 ~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~ 607 (792)
++||+++.++++..+.++++.||+++.|+++|+.|.+.+|...+...+
T Consensus 662 ~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 662 ETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred HhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999976554443
No 26
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=8.4e-74 Score=644.70 Aligned_cols=475 Identities=32% Similarity=0.456 Sum_probs=420.1
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhc--cCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEE
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSE--FVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLL 78 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll 78 (792)
+++++++...++.+++++++++.+++++ ..|++++|+| +| +++|++++|+|||+|.+++||+|||||+++
T Consensus 2 i~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r-------~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl 73 (499)
T TIGR01494 2 ILILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLR-------NG-WKEIPASDLVPGDIVLVKSGEIVPADGVLL 73 (499)
T ss_pred EEEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEE-------CC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEE
Confidence 3577888999999999999999999998 8899999999 88 899999999999999999999999999999
Q ss_pred EeCCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCCC-CCh
Q 045750 79 TSKHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKP-PDD 157 (792)
Q Consensus 79 ~~~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~~-~~~ 157 (792)
+|. +.||||+|||||.|+.|.+++. +++|+.+.+|+..+.|+.+|.+|..+++...+..... +++
T Consensus 74 ~g~-~~vdes~LTGEs~pv~k~~g~~-------------v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~ 139 (499)
T TIGR01494 74 SGS-CFVDESNLTGESVPVLKTAGDA-------------VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTP 139 (499)
T ss_pred Ecc-EEEEcccccCCCCCeeeccCCc-------------cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCc
Confidence 996 5999999999999999999844 8999999999999999999999999999888765443 567
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHhhhhhccccc---chhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccc
Q 045750 158 FEKGVRRIS-FVLICVMLIVATIIILIDYFTSK---NLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVK 233 (792)
Q Consensus 158 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk 233 (792)
+++..+++. .+++++.++++++.++++..... +|.+++.+++++++.+|||+|++++++++..+..+++++|+++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk 219 (499)
T TIGR01494 140 LQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVR 219 (499)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEe
Confidence 888888888 66666666666666555543322 37889999999999999999999999999999999999999999
Q ss_pred cchhhhcccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCccccccc
Q 045750 234 SLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASK 313 (792)
Q Consensus 234 ~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~ 313 (792)
+++++|+||++|++|||||||||+|+|++.++...+. +..++||+|.|++++++..
T Consensus 220 ~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~----------------~~~s~hp~~~ai~~~~~~~-------- 275 (499)
T TIGR01494 220 SLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG----------------EYLSGHPDERALVKSAKWK-------- 275 (499)
T ss_pred chhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC----------------CcCCCChHHHHHHHHhhhc--------
Confidence 9999999999999999999999999999999875432 3467899999999998542
Q ss_pred ceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHH
Q 045750 314 WKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEEL 393 (792)
Q Consensus 314 ~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (792)
.....||++.+++++++++.+ + + .+.||+++.+.+.|... .+..+++
T Consensus 276 --~~~~~~f~~~~~~~~~~~~~~--~--------~--~~~~G~~~~i~~~~~~~-------------------~~~~~~~ 322 (499)
T TIGR01494 276 --ILNVFEFSSVRKRMSVIVRGP--D--------G--TYVKGAPEFVLSRVKDL-------------------EEKVKEL 322 (499)
T ss_pred --CcceeccCCCCceEEEEEecC--C--------c--EEEeCCHHHHHHhhHHH-------------------HHHHHHH
Confidence 234679999999999998752 1 1 37899999999988522 1223456
Q ss_pred hhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 045750 394 SNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICH 473 (792)
Q Consensus 394 ~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~ 473 (792)
+.+|+|++++|++. +++|++.++|++|++++++|+.|+++|++++|+|||++.++..+|+
T Consensus 323 ~~~g~~~~~~a~~~--------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~ 382 (499)
T TIGR01494 323 AQSGLRVLAVASKE--------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAK 382 (499)
T ss_pred HhCCCEEEEEEECC--------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH
Confidence 78999999999754 7999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecC
Q 045750 474 EVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDS 553 (792)
Q Consensus 474 ~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~ 553 (792)
++|+ +++++|++|.++++.+|+.| +.|+|+|||.||++|+++||+||+|+
T Consensus 383 ~lgi----------------------------~~~~~p~~K~~~v~~l~~~g-~~v~~vGDg~nD~~al~~Advgia~~- 432 (499)
T TIGR01494 383 ELGI----------------------------FARVTPEEKAALVEALQKKG-RVVAMTGDGVNDAPALKKADVGIAMG- 432 (499)
T ss_pred HcCc----------------------------eeccCHHHHHHHHHHHHHCC-CEEEEECCChhhHHHHHhCCCccccc-
Confidence 9986 58899999999999999998 99999999999999999999999997
Q ss_pred CcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHH
Q 045750 554 GASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLI 608 (792)
Q Consensus 554 ~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~ 608 (792)
++++||+++.++++..+..++.+||+++.++++++.|.+.+|+..+.+.+.
T Consensus 433 ----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 433 ----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred ----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999999999886555543
No 27
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=3.3e-77 Score=685.66 Aligned_cols=746 Identities=20% Similarity=0.225 Sum_probs=544.7
Q ss_pred CeEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 1 MLALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
|++++.++++++.+|++|+.+..+++++. ++.|.|. ++.+++..|+++++||+|.+..+|.+|||.+++++
T Consensus 87 l~~vl~~t~iKd~~eD~rR~~~D~~iN~~---~~~v~~~------~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLss 157 (1151)
T KOG0206|consen 87 LLFVLGITAIKDAIEDYRRHKQDKEVNNR---KVEVLRG------DGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSS 157 (1151)
T ss_pred eeeeehHHHHHHHHhhhhhhhccHHhhcc---eeEEecC------CceeeeeccceeeeeeEEEeccCCccccceEEecC
Confidence 57899999999999999999998877665 8889883 23389999999999999999999999999999998
Q ss_pred CC----eEEEeccccCCCcccccccccccC---------------------------------CCCC-CCcccceEeecc
Q 045750 81 KH----LVVSQSSLTGESWTAEKTADIRED---------------------------------HCTP-LLDLKNICFMGT 122 (792)
Q Consensus 81 ~~----~~Vdes~ltGEs~p~~k~~~~~~~---------------------------------~~~~-~~~~~~~v~~Gt 122 (792)
+. |+|++++|+||+..+.|+...... .... +++.+|++++|+
T Consensus 158 s~~~~~cyveT~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~ 237 (1151)
T KOG0206|consen 158 SDEDGICYVETANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGS 237 (1151)
T ss_pred CCCCceeEEEEeecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCc
Confidence 76 899999999999999886532110 0011 678889999999
Q ss_pred EEeeee-EEEEEEeeccccHHHHHHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccc------------
Q 045750 123 NVVSGS-GTGLVVSTGSKTYTSTMFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSK------------ 189 (792)
Q Consensus 123 ~v~~g~-~~~~V~~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 189 (792)
++.+++ +.|+|++||.+|+.++. ....+.+.+.+++.++.....++.+.+.++.+..+....+..
T Consensus 238 ~lrNT~~v~G~vv~tG~dtK~~~n--~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 315 (1151)
T KOG0206|consen 238 RLRNTEWVYGVVVFTGHDTKLMQN--SGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYL 315 (1151)
T ss_pred eeccCcEEEEEEEEcCCcchHHHh--cCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhh
Confidence 999987 99999999999977643 333555677899999999888877777777666554332211
Q ss_pred -------chhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH------HHh----hcCCccccchhhhcccceeEEEeccc
Q 045750 190 -------NLSESILFGISVACALTPQMFPLIVNTSLAKGAL------AMA----RDRCVVKSLGAIRDMGTMDILCIDKT 252 (792)
Q Consensus 190 -------~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~------~~~----~~~i~vk~~~~~e~lg~v~~i~~DKT 252 (792)
.....+..++.++...+|.+|...+.+.....+. .|. ...+.+|+.+..|+||++++|++|||
T Consensus 316 ~~~~~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKT 395 (1151)
T KOG0206|consen 316 SPSEAAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKT 395 (1151)
T ss_pred cCchHHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCc
Confidence 0122345556677788999999887777666553 232 23578999999999999999999999
Q ss_pred cccccCceEEEEeeCCCC----------------C----------------------------C----cHHHHHHHHhhc
Q 045750 253 GTLTMDRAIMVNHLDSWG----------------F----------------------------P----KENVLRFAFLNS 284 (792)
Q Consensus 253 GTLT~~~~~v~~~~~~~~----------------~----------------------------~----~~~~l~~a~~~~ 284 (792)
||||+|.|.+.++...+. . . .+-...+|.||+
T Consensus 396 GTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~cht 475 (1151)
T KOG0206|consen 396 GTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHT 475 (1151)
T ss_pred CccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccce
Confidence 999999999988743210 0 0 011223455543
Q ss_pred cc----------cCCCCCchHHHHHHHHHhcCccc--------------ccccceEeEEeCCCCCCCeEEEEEeeCCCCc
Q 045750 285 YY----------KTDQKYPLDDAILAYVYTNGYRF--------------QASKWKKLDEIPFDFVRRKVSVILETESITE 340 (792)
Q Consensus 285 ~~----------~~~~~~p~~~al~~~~~~~~~~~--------------~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~ 340 (792)
.. .+...+|+|.|+++.|++.|+.+ ....|+.++..+|+|.||||||+++.+ ++
T Consensus 476 v~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p--~g 553 (1151)
T KOG0206|consen 476 VIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDP--DG 553 (1151)
T ss_pred eeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcC--CC
Confidence 32 34467899999999999988765 356899999999999999999999987 44
Q ss_pred cccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCC--
Q 045750 341 DRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNR-- 418 (792)
Q Consensus 341 ~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~-- 418 (792)
...+|||||+.+|.++++.. ....+++-.++.++|+.+|+|++|+|||.++++++..|..
T Consensus 554 -------~i~LycKGADsvI~erL~~~-----------~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~ 615 (1151)
T KOG0206|consen 554 -------RILLYCKGADSVIFERLSKN-----------GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERY 615 (1151)
T ss_pred -------cEEEEEcCcchhhHhhhhhc-----------chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHH
Confidence 78999999999999999842 2566777788999999999999999999998876544421
Q ss_pred ----------------CCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC---
Q 045750 419 ----------------NDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--- 479 (792)
Q Consensus 419 ----------------~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--- 479 (792)
..+.+|+||+++|.+++||+++++++++|+.|++||||+|++|||..+||.+++..|++-.
T Consensus 616 ~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m 695 (1151)
T KOG0206|consen 616 NEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDM 695 (1151)
T ss_pred HHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCc
Confidence 1356899999999999999999999999999999999999999999999999999999821
Q ss_pred ----------------------------------------------CccccchhhhccCHHH----HHHh--hhcceEEE
Q 045750 480 ----------------------------------------------THVSTGPDLELLSQES----FHER--VKRATVLA 507 (792)
Q Consensus 480 ----------------------------------------------~~~~~g~~~~~~~~~~----~~~~--~~~~~v~~ 507 (792)
+.+++|..+....+++ +.+. -++.++||
T Consensus 696 ~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCC 775 (1151)
T KOG0206|consen 696 KLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICC 775 (1151)
T ss_pred eEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEc
Confidence 1234444443332221 1122 24678999
Q ss_pred EeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHhhcCEEeccCCchHHHHHH-HHhHHhH
Q 045750 508 RLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAKDLADIILLEKDLNVLVAGV-ERGRVTF 585 (792)
Q Consensus 508 ~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~~~ad~vl~~~~~~~i~~~i-~~gR~~~ 585 (792)
|++|.||+.+|+..++..+..+++||||.||++|++.|||||+++ .+..+|..+||+-+. .|.-+.+++ .|||+.|
T Consensus 776 R~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIa--qFrfL~rLLLVHGhW~Y 853 (1151)
T KOG0206|consen 776 RVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIA--QFRFLERLLLVHGHWSY 853 (1151)
T ss_pred cCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHH--HHHHHhhhheeecceeH
Confidence 999999999999998776689999999999999999999999996 677788899999884 477777766 8999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCchHHHHHHHHHHh-hhhhhhcc---cCCCCccccCCCCCCCCCCc
Q 045750 586 GNTMKYIKMSIIANLGGVLSLLIATMFLQT---DPLTPKQLLTQNFLY-SVGQIAIP---WDKMEGDYVKTPQIWSENGL 658 (792)
Q Consensus 586 ~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~-~~~~~~~~---~~~~~~~~m~~p~~~~~~~l 658 (792)
.|+.+++.|.++.|+...+..+...++.++ ..+.+.++.+.|++. .+|.+.++ .|.++...|+.|..|+.+..
T Consensus 854 ~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~ 933 (1151)
T KOG0206|consen 854 IRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQL 933 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhh
Confidence 999999999999999888888877776655 345667776666554 48887776 46667778899998875321
Q ss_pred ---c--h---hhhhhhhHHHHHHHHHHHHHHHHhhh----cccc--hHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Q 045750 659 ---P--M---FILFNGPVCILCDVTALFFLWFYYEA----YNQM--NVVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQE 724 (792)
Q Consensus 659 ---~--~---~~~~~g~~~a~~~~~~~~~~~~~~~~----~~~~--~~~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~~ 724 (792)
+ + .+...|+++++ ..|++.+..+.. .++. +...+.+..|..+++...+.+ ...+..|.|
T Consensus 934 ~~~f~~~~f~~~~~~g~~~sl---i~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~i-aL~~~ywT~--- 1006 (1151)
T KOG0206|consen 934 NLLFNWKRFWGWMLDGFYQSL---VIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKI-ALETSYWTW--- 1006 (1151)
T ss_pred ccccchHHHHHHHHHHHHhhe---eeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeee-eeeehheeH---
Confidence 1 2 22222333332 222222222211 1111 222233333333333333321 122223322
Q ss_pred cchHHHHHHHHHHHHHHHHhhh--cc-------ccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045750 725 VASWPVLSSTLVISAIGIAIPF--TA-------IGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYILI 787 (792)
Q Consensus 725 ~~n~~l~~~~~~~~~l~~~~~~--~p-------l~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~ 787 (792)
.|+..+|++++...+.+++.. .| ...++...-..+.+|+.+++.++++++++-.+|.+.+..
T Consensus 1007 -i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~ 1077 (1151)
T KOG0206|consen 1007 -INHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTF 1077 (1151)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhh
Confidence 344444444433322222221 12 112222333567789999999999999998887765543
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=5.4e-74 Score=651.67 Aligned_cols=499 Identities=27% Similarity=0.350 Sum_probs=425.3
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCC-eEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSE-LIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g-~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
+++++++..++.++++|+++.++++.+..|++++|+| +| ++++|++++|+|||+|.+++||+|||||++++|
T Consensus 25 ~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r-------~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g 97 (556)
T TIGR01525 25 LFLFLLGETLEERAKGRASDALSALLALAPSTARVLQ-------GDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISG 97 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-------CCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEec
Confidence 3566778888999999999999999999999999999 74 999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcC-CCCCChHH
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGK-QKPPDDFE 159 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~-~~~~~~~~ 159 (792)
+. .||||++||||.|+.|.+| +.+|+||.+.+|+++++|++||.+|++|++.+.+.+ ..++++++
T Consensus 98 ~~-~vdes~lTGEs~pv~k~~g-------------~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~ 163 (556)
T TIGR01525 98 ES-EVDESALTGESMPVEKKEG-------------DEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQ 163 (556)
T ss_pred ce-EEeehhccCCCCCEecCCc-------------CEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHH
Confidence 85 9999999999999999988 459999999999999999999999999999988765 33567799
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhh
Q 045750 160 KGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIR 239 (792)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e 239 (792)
+.+++++.+++++.++++++.+++++..... ..+..++++++++|||+|++++++++..+..+++|+|+++|+++++|
T Consensus 164 ~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le 241 (556)
T TIGR01525 164 RLADRIASYYVPAVLAIALLTFVVWLALGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALE 241 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHH
Confidence 9999999988888888888877776654433 78999999999999999999999999999999999999999999999
Q ss_pred cccceeEEEeccccccccCceEEEEeeCCCCCC--cHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEe
Q 045750 240 DMGTMDILCIDKTGTLTMDRAIMVNHLDSWGFP--KENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKL 317 (792)
Q Consensus 240 ~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~ 317 (792)
++|++|++|||||||||+|+|++.++.+..+.+ .++++.++ +..+..+.||++.|+++++++.+..... .+ ..
T Consensus 242 ~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~l~~a---~~~e~~~~hp~~~Ai~~~~~~~~~~~~~-~~-~~ 316 (556)
T TIGR01525 242 KLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASISEEELLALA---AALEQSSSHPLARAIVRYAKKRGLELPK-QE-DV 316 (556)
T ss_pred HhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCccHHHHHHHH---HHHhccCCChHHHHHHHHHHhcCCCccc-cc-Ce
Confidence 999999999999999999999999987766554 66777765 3446678999999999999876654311 10 11
Q ss_pred EEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhcc
Q 045750 318 DEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEG 397 (792)
Q Consensus 318 ~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 397 (792)
.+++ .++....++ +...+..|+++.+ + . ++.. ...+....+.++.+|
T Consensus 317 ~~~~----~~gi~~~~~-------------g~~~~~lg~~~~~-~-~-------~~~~-------~~~~~~~~~~~~~~g 363 (556)
T TIGR01525 317 EEVP----GKGVEATVD-------------GQEEVRIGNPRLL-E-L-------AAEP-------ISASPDLLNEGESQG 363 (556)
T ss_pred eEec----CCeEEEEEC-------------CeeEEEEecHHHH-h-h-------cCCC-------chhhHHHHHHHhhCC
Confidence 2221 122222221 1124556766554 1 1 1100 011223445678899
Q ss_pred CeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHhC
Q 045750 398 LRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKG-VKAKLLTGDSLSLAIKICHEVG 476 (792)
Q Consensus 398 ~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~G-i~v~~~Tgd~~~~a~~ia~~~g 476 (792)
+++++++. |.+++|.+.++|++||+++++|++|+++| ++++|+|||+..++..+++++|
T Consensus 364 ~~~~~v~~--------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lg 423 (556)
T TIGR01525 364 KTVVFVAV--------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELG 423 (556)
T ss_pred cEEEEEEE--------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhC
Confidence 99999985 34899999999999999999999999999 9999999999999999999999
Q ss_pred CCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcH
Q 045750 477 IRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGAS 556 (792)
Q Consensus 477 i~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~ 556 (792)
++. +|++..|++|.++++.+++.+ +.|+|+|||.||++|+++||+|+++|++++
T Consensus 424 i~~-------------------------~f~~~~p~~K~~~v~~l~~~~-~~v~~vGDg~nD~~al~~A~vgia~g~~~~ 477 (556)
T TIGR01525 424 IDE-------------------------VHAELLPEDKLAIVKELQEEG-GVVAMVGDGINDAPALAAADVGIAMGAGSD 477 (556)
T ss_pred CCe-------------------------eeccCCHHHHHHHHHHHHHcC-CEEEEEECChhHHHHHhhCCEeEEeCCCCH
Confidence 964 889999999999999999988 899999999999999999999999999999
Q ss_pred HHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHH
Q 045750 557 VAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLL 607 (792)
Q Consensus 557 ~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~ 607 (792)
.+++.||+++.++++..+.++++.||+++.|+++++.|.+.+|+..+...+
T Consensus 478 ~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 478 VAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred HHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988765544
No 29
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=8.9e-73 Score=638.92 Aligned_cols=479 Identities=24% Similarity=0.328 Sum_probs=409.6
Q ss_pred hHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCCeEEEec
Q 045750 9 VCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLVVSQS 88 (792)
Q Consensus 9 ~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~~~Vdes 88 (792)
-.++.+.++|+++.+++|.++.|++++++|+ +|++++|+.++|+|||+|.+++||+|||||+|++|+. .||||
T Consensus 68 ~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~------~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~-~vdes 140 (562)
T TIGR01511 68 RWLEMLAKGRASDALSKLAKLQPSTATLLTK------DGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGES-EVDES 140 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEEEC------CCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECce-EEehH
Confidence 3444455557778888899999999999983 5778999999999999999999999999999999986 99999
Q ss_pred cccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHHHHHHHHH
Q 045750 89 SLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKGVRRISF 167 (792)
Q Consensus 89 ~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 167 (792)
.|||||.|+.|++|+. +|+||.+.+|.++++|+++|.+|.++++.+.+++. .+++++++..++++.
T Consensus 141 ~lTGEs~pv~k~~gd~-------------V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~ 207 (562)
T TIGR01511 141 LVTGESLPVPKKVGDP-------------VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAG 207 (562)
T ss_pred hhcCCCCcEEcCCCCE-------------EEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 9999999999999854 99999999999999999999999999999888653 345679999999999
Q ss_pred HHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhcccceeEE
Q 045750 168 VLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDMGTMDIL 247 (792)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~lg~v~~i 247 (792)
++++++++++++.+++|. ..+.+++++++++|||+|++++|+++..+..+++|+|+++|+++++|+|+++|++
T Consensus 208 ~~~~~v~~~a~~~~~~~~-------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i 280 (562)
T TIGR01511 208 YFVPVVIAIALITFVIWL-------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTV 280 (562)
T ss_pred HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEE
Confidence 988888877777665542 5889999999999999999999999999999999999999999999999999999
Q ss_pred EeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEeCCCCCCC
Q 045750 248 CIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPFDFVRR 327 (792)
Q Consensus 248 ~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~f~~~~k 327 (792)
|||||||||+|+|++.++.+.++.++++++.++ +..+..+.||+++|+++++++.+.... .....+++| .+
T Consensus 281 ~fDKTGTLT~g~~~v~~i~~~~~~~~~~~l~~a---a~~e~~s~HPia~Ai~~~~~~~~~~~~--~~~~~~~~~----g~ 351 (562)
T TIGR01511 281 VFDKTGTLTQGKPTVTDVHVFGDRDRTELLALA---AALEAGSEHPLAKAIVSYAKEKGITLV--EVSDFKAIP----GI 351 (562)
T ss_pred EECCCCCCcCCCEEEEEEecCCCCCHHHHHHHH---HHHhccCCChHHHHHHHHHHhcCCCcC--CCCCeEEEC----Cc
Confidence 999999999999999999877777777888776 445678899999999999987664321 122222332 23
Q ss_pred eEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEe
Q 045750 328 KVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKR 407 (792)
Q Consensus 328 ~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~ 407 (792)
.+...++ + ..+..|+++.+.+... ..+ ++.++|.+++.++.
T Consensus 352 Gi~~~~~-------------g-~~~~iG~~~~~~~~~~-----------~~~------------~~~~~g~~~~~~~~-- 392 (562)
T TIGR01511 352 GVEGTVE-------------G-TKIQLGNEKLLGENAI-----------KID------------GKAEQGSTSVLVAV-- 392 (562)
T ss_pred eEEEEEC-------------C-EEEEEECHHHHHhCCC-----------CCC------------hhhhCCCEEEEEEE--
Confidence 3333332 1 2356788877543111 011 12367888887764
Q ss_pred cCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchh
Q 045750 408 LLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPD 487 (792)
Q Consensus 408 ~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~ 487 (792)
|.+++|.+.++|++||+++++|++|++.|++++|+|||+...+..+++++|++
T Consensus 393 ------------------~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--------- 445 (562)
T TIGR01511 393 ------------------NGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--------- 445 (562)
T ss_pred ------------------CCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc---------
Confidence 45899999999999999999999999999999999999999999999999994
Q ss_pred hhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEec
Q 045750 488 LELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILL 567 (792)
Q Consensus 488 ~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~ 567 (792)
+|++..|++|.++++.+++.+ +.|+|+|||.||++|+++||+||+||++++.+++.||+++.
T Consensus 446 -----------------~~~~~~p~~K~~~v~~l~~~~-~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~ 507 (562)
T TIGR01511 446 -----------------VRAEVLPDDKAALIKELQEKG-RVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLM 507 (562)
T ss_pred -----------------EEccCChHHHHHHHHHHHHcC-CEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEe
Confidence 678889999999999999988 89999999999999999999999999999999999999999
Q ss_pred cCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHH
Q 045750 568 EKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLL 607 (792)
Q Consensus 568 ~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~ 607 (792)
++++..+.++++.||++++++++++.|.+.+|+..+...+
T Consensus 508 ~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 508 RNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987654443
No 30
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-74 Score=630.11 Aligned_cols=496 Identities=23% Similarity=0.294 Sum_probs=420.5
Q ss_pred hHHHHHHHH---hHHHHHHHHhccCCCCeEEEecCCccccCCe-EEEEecCCCCCCcEEEECCCCeecccEEEEEeCCeE
Q 045750 9 VCLRFYQEY---GSSKAAMKLSEFVRCPIKVQRCAGRVVQSEL-IVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLV 84 (792)
Q Consensus 9 ~~~~~~~~~---~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~-~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~~~ 84 (792)
.+.+++|.. |+..++.+|.++.|.++.+.. +|+ +.+|+.+.+++||+|.+.||++||+||+|++|++ +
T Consensus 352 ~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~-------~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~ 423 (951)
T KOG0207|consen 352 TLGRWLESLAKGKTSEALSKLMSLAPSKATIIE-------DGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-E 423 (951)
T ss_pred HHHHHHHHHhhccchHHHHHHhhcCcccceEee-------cCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-e
Confidence 344555544 455677788888899999998 664 8899999999999999999999999999999997 9
Q ss_pred EEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChHHHHHH
Q 045750 85 VSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDFEKGVR 163 (792)
Q Consensus 85 Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~~~~~~ 163 (792)
||||.+|||+.|+.|++|+. |.+||.+.+|.....++++|.+|.++++.+..++.+ .+.++|+..+
T Consensus 424 VDEs~iTGEs~PV~Kk~gs~-------------ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aD 490 (951)
T KOG0207|consen 424 VDESLITGESMPVPKKKGST-------------VIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLAD 490 (951)
T ss_pred echhhccCCceecccCCCCe-------------eeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHH
Confidence 99999999999999999954 999999999999999999999999999999987644 4567999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccc-----------cchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCcc
Q 045750 164 RISFVLICVMLIVATIIILIDYFTS-----------KNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVV 232 (792)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v 232 (792)
+++.+++++++++++..+.+|.+.+ ..+..++..++++++++|||+|.++.|++...+....+++|+++
T Consensus 491 kia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLI 570 (951)
T KOG0207|consen 491 KIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLI 570 (951)
T ss_pred HhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEE
Confidence 9999999998888888877776543 24556788889999999999999999999999999999999999
Q ss_pred ccchhhhcccceeEEEeccccccccCceEEEEeeCCCC-CCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCccccc
Q 045750 233 KSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNHLDSWG-FPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQA 311 (792)
Q Consensus 233 k~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~ 311 (792)
|..+.+|.+.++++++||||||||+|++.+.++....+ .+..+.+.++ +..|..++||+.+|+++|+++.......
T Consensus 571 KGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~~~e~l~~v---~a~Es~SeHPig~AIv~yak~~~~~~~~ 647 (951)
T KOG0207|consen 571 KGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPISLKEALALV---AAMESGSEHPIGKAIVDYAKEKLVEPNP 647 (951)
T ss_pred cCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcccHHHHHHHH---HHHhcCCcCchHHHHHHHHHhcccccCc
Confidence 99999999999999999999999999999999866555 5666777665 5568899999999999999876522211
Q ss_pred ccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHH
Q 045750 312 SKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGE 391 (792)
Q Consensus 312 ~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (792)
........+| -+.....+.+.. . ...-|+-+.+.+.-... .+++++..+
T Consensus 648 ~~~~~~~~~p--g~g~~~~~~~~~------------~--~i~iGN~~~~~r~~~~~---------------~~~i~~~~~ 696 (951)
T KOG0207|consen 648 EGVLSFEYFP--GEGIYVTVTVDG------------N--EVLIGNKEWMSRNGCSI---------------PDDILDALT 696 (951)
T ss_pred cccceeeccc--CCCcccceEEee------------e--EEeechHHHHHhcCCCC---------------chhHHHhhh
Confidence 1111222222 122222222211 1 25668777665422111 123666677
Q ss_pred HHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 045750 392 ELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKI 471 (792)
Q Consensus 392 ~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~i 471 (792)
+....|+.+.+++.. .++.|++.++|++|||+..+|+.||+.|++++|+|||+..+|.++
T Consensus 697 ~~e~~g~tvv~v~vn--------------------~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~sv 756 (951)
T KOG0207|consen 697 ESERKGQTVVYVAVN--------------------GQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSV 756 (951)
T ss_pred hHhhcCceEEEEEEC--------------------CEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHH
Confidence 788899999999874 399999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 472 CHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 472 a~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
|+++|++. |+++..|+||.+.++.+|+.+ ..|+|+|||.||+|+|.+||+||+|
T Consensus 757 A~~VGi~~-------------------------V~aev~P~~K~~~Ik~lq~~~-~~VaMVGDGINDaPALA~AdVGIai 810 (951)
T KOG0207|consen 757 AQQVGIDN-------------------------VYAEVLPEQKAEKIKEIQKNG-GPVAMVGDGINDAPALAQADVGIAI 810 (951)
T ss_pred HHhhCcce-------------------------EEeccCchhhHHHHHHHHhcC-CcEEEEeCCCCccHHHHhhccceee
Confidence 99999875 999999999999999999998 8999999999999999999999999
Q ss_pred cCCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHH
Q 045750 552 DSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLS 605 (792)
Q Consensus 552 ~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~ 605 (792)
+.+++.+.++||+|+++||+..++.+|..+|++..|++.|+.|+++||+..+-.
T Consensus 811 g~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpI 864 (951)
T KOG0207|consen 811 GAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPI 864 (951)
T ss_pred ccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999999999865433
No 31
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=7.2e-72 Score=629.78 Aligned_cols=480 Identities=26% Similarity=0.360 Sum_probs=413.3
Q ss_pred EEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC
Q 045750 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH 82 (792)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~ 82 (792)
++++++..++.++++|+++.++++.++.|++++|+| ||+++++++++|+|||+|.+++||+|||||++++|+.
T Consensus 26 ~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r-------~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g~~ 98 (536)
T TIGR01512 26 LLFSIGETLEEYASGRARRALKALMELAPDTARVLR-------GGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTS 98 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-------CCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEeCcE
Confidence 456678889999999999999999999999999999 9999999999999999999999999999999999975
Q ss_pred eEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHHH
Q 045750 83 LVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKG 161 (792)
Q Consensus 83 ~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~~ 161 (792)
.||||+|||||.|+.|.+|+ .+|+||.+.+|+++++|++||.+|.+|++.+.+++. .+++++++.
T Consensus 99 -~vdes~lTGEs~pv~k~~g~-------------~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~ 164 (536)
T TIGR01512 99 -TVDESALTGESVPVEKAPGD-------------EVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRF 164 (536)
T ss_pred -EEEecccCCCCCcEEeCCCC-------------EEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHH
Confidence 99999999999999999884 499999999999999999999999999999888653 356789999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhcc
Q 045750 162 VRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDM 241 (792)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~l 241 (792)
+++++.+++++.++++++.++++++... +...+.+++++++++|||+|++++++++..+..+++|+|+++|+++++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l 243 (536)
T TIGR01512 165 IDRFARYYTPVVLAIALAIWLVPGLLKR-WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEAL 243 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhh
Confidence 9999998888888877777776654433 344888899999999999999999999999999999999999999999999
Q ss_pred cceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEeC
Q 045750 242 GTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIP 321 (792)
Q Consensus 242 g~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~ 321 (792)
|++|++|||||||||+|+|++.++.+ .+++..+. ..+..+.||+++|+++++++.+ .+....++|
T Consensus 244 ~~v~~i~fDKTGTLT~~~~~v~~~~~------~~~l~~a~---~~e~~~~hp~~~Ai~~~~~~~~------~~~~~~~~~ 308 (536)
T TIGR01512 244 AKIKTVAFDKTGTLTTGRPKVVDVVP------AEVLRLAA---AAEQASSHPLARAIVDYARKRE------NVESVEEVP 308 (536)
T ss_pred cCCCEEEECCCCCCcCCceEEEEeeH------HHHHHHHH---HHhccCCCcHHHHHHHHHHhcC------CCcceEEec
Confidence 99999999999999999999999864 25666663 4567889999999999997653 222233333
Q ss_pred CCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeE
Q 045750 322 FDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVI 401 (792)
Q Consensus 322 f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl 401 (792)
.+.+...++ + . .+..|+++.+.+.. . ..+..+|.+++
T Consensus 309 ----g~gi~~~~~-----g-------~--~~~ig~~~~~~~~~---------~----------------~~~~~~~~~~~ 345 (536)
T TIGR01512 309 ----GEGVRAVVD-----G-------G--EVRIGNPRSLEAAV---------G----------------ARPESAGKTIV 345 (536)
T ss_pred ----CCeEEEEEC-----C-------e--EEEEcCHHHHhhcC---------C----------------cchhhCCCeEE
Confidence 122222221 1 2 23457765543210 0 03445677776
Q ss_pred EEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHhCCCCC
Q 045750 402 GVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGV-KAKLLTGDSLSLAIKICHEVGIRTT 480 (792)
Q Consensus 402 ~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi-~v~~~Tgd~~~~a~~ia~~~gi~~~ 480 (792)
.++. |..+.|.+.++|++||+++++|++|+++|+ +++++|||+..++..+++++|++.
T Consensus 346 ~v~~--------------------~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~- 404 (536)
T TIGR01512 346 HVAR--------------------DGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE- 404 (536)
T ss_pred EEEE--------------------CCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-
Confidence 6653 458999999999999999999999999999 999999999999999999999964
Q ss_pred ccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHH
Q 045750 481 HVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD-SGASVAK 559 (792)
Q Consensus 481 ~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~-~~~~~~~ 559 (792)
+|++..|++|.++++.+++.+ +.|+|+|||.||++|+++||+|+++| ++++.++
T Consensus 405 ------------------------~f~~~~p~~K~~~i~~l~~~~-~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~ 459 (536)
T TIGR01512 405 ------------------------VHAELLPEDKLEIVKELREKY-GPVAMVGDGINDAPALAAADVGIAMGASGSDVAI 459 (536)
T ss_pred ------------------------hhhccCcHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHH
Confidence 788899999999999999998 89999999999999999999999999 8999999
Q ss_pred hhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHHHHH
Q 045750 560 DLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLSLLI 608 (792)
Q Consensus 560 ~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~~~~ 608 (792)
+.||+++.++++..+.+++..||+++.++++++.|.+.+|+..+.+.++
T Consensus 460 ~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 460 ETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred HhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999876665543
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=2.8e-71 Score=657.20 Aligned_cols=489 Identities=26% Similarity=0.289 Sum_probs=416.4
Q ss_pred hHHHHHHH---HhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCCeEE
Q 045750 9 VCLRFYQE---YGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKHLVV 85 (792)
Q Consensus 9 ~~~~~~~~---~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~~~V 85 (792)
.+.+++|+ .|+.+++++|.++.|++++++| +|++++|+.++|+|||+|.+++||+||+||+|++|+ ..|
T Consensus 297 ~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~-------~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~-~~v 368 (834)
T PRK10671 297 NLGHMLEARARQRSSKALEKLLDLTPPTARVVT-------DEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGE-AWL 368 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe-------CCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEce-EEE
Confidence 33445554 4666777888899999999999 888999999999999999999999999999999997 499
Q ss_pred EeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCC-CCCChHHHHHHH
Q 045750 86 SQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQ-KPPDDFEKGVRR 164 (792)
Q Consensus 86 des~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~-~~~~~~~~~~~~ 164 (792)
|||+|||||.|+.|.+|+. +|+||.+.+|.+.+.|+++|.+|.++++.+.+++. ..++++++..++
T Consensus 369 deS~lTGEs~pv~k~~gd~-------------V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~ 435 (834)
T PRK10671 369 DEAMLTGEPIPQQKGEGDS-------------VHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADK 435 (834)
T ss_pred eehhhcCCCCCEecCCCCE-------------EEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHH
Confidence 9999999999999999954 99999999999999999999999999999888753 345679999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhccccc--chhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhccc
Q 045750 165 ISFVLICVMLIVATIIILIDYFTSK--NLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDMG 242 (792)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~lg 242 (792)
++.++++++++++++.+++|++.+. .|...+.+++++++++|||+|++++|+++..+..+++|+|+++|+.+++|+++
T Consensus 436 ~a~~~v~~v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~ 515 (834)
T PRK10671 436 ISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRAS 515 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhc
Confidence 9999888888888777776655433 26678889999999999999999999999999999999999999999999999
Q ss_pred ceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEeCC
Q 045750 243 TMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPF 322 (792)
Q Consensus 243 ~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~f 322 (792)
++|++|||||||||+|+|++.++....+.++++++.++ ...+..+.||+++|+++++..... ........+|
T Consensus 516 ~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~a---~~~e~~s~hp~a~Ai~~~~~~~~~----~~~~~~~~~~- 587 (834)
T PRK10671 516 TLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEAQALRLA---AALEQGSSHPLARAILDKAGDMTL----PQVNGFRTLR- 587 (834)
T ss_pred CCCEEEEcCCCccccCceEEEEEEccCCCCHHHHHHHH---HHHhCCCCCHHHHHHHHHHhhCCC----CCcccceEec-
Confidence 99999999999999999999998877777777777776 345678899999999998853221 1111111111
Q ss_pred CCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEE
Q 045750 323 DFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIG 402 (792)
Q Consensus 323 ~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~ 402 (792)
.+.+...+ ++ ..+.+|+++.+.+... . .+.+.+..+++.++|.+++.
T Consensus 588 ---g~Gv~~~~-----~g---------~~~~~G~~~~~~~~~~-------------~---~~~~~~~~~~~~~~g~~~v~ 634 (834)
T PRK10671 588 ---GLGVSGEA-----EG---------HALLLGNQALLNEQQV-------------D---TKALEAEITAQASQGATPVL 634 (834)
T ss_pred ---ceEEEEEE-----CC---------EEEEEeCHHHHHHcCC-------------C---hHHHHHHHHHHHhCCCeEEE
Confidence 12222221 11 2356799887643211 1 12344455677889999999
Q ss_pred EEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCcc
Q 045750 403 VAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHV 482 (792)
Q Consensus 403 ~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~ 482 (792)
++++ ..++|++.++|++||+++++|++|++.|++++|+|||+..++..+++++|++.
T Consensus 635 va~~--------------------~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~--- 691 (834)
T PRK10671 635 LAVD--------------------GKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE--- 691 (834)
T ss_pred EEEC--------------------CEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE---
Confidence 9863 37999999999999999999999999999999999999999999999999974
Q ss_pred ccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhc
Q 045750 483 STGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLA 562 (792)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~a 562 (792)
++++..|++|.++++.++.++ +.|+|+|||.||++|+++||+||+||++++.++++|
T Consensus 692 ----------------------~~~~~~p~~K~~~i~~l~~~~-~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~a 748 (834)
T PRK10671 692 ----------------------VIAGVLPDGKAEAIKRLQSQG-RQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETA 748 (834)
T ss_pred ----------------------EEeCCCHHHHHHHHHHHhhcC-CEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhC
Confidence 889999999999999999998 899999999999999999999999999999999999
Q ss_pred CEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHHHHHHH
Q 045750 563 DIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANLGGVLS 605 (792)
Q Consensus 563 d~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~~~~~~ 605 (792)
|+++.++++.+|.++++.||+++.++++|+.|.+.+|+..+..
T Consensus 749 d~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~ 791 (834)
T PRK10671 749 AITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPI 791 (834)
T ss_pred CEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999866543
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-60 Score=486.24 Aligned_cols=507 Identities=23% Similarity=0.279 Sum_probs=406.5
Q ss_pred EEEehHhHHHHHHHHhHHHHHHHHhccCC-CCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVR-CPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
+.+++..+-+.+-|-|.+-..+.|++... ..++.++. +|.++.+++.+|+.||+|.+.+||.||+||.+++|.
T Consensus 74 fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~------~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~ 147 (681)
T COG2216 74 FTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRA------DGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGV 147 (681)
T ss_pred HHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcC------CCCeeeccccccccCCEEEEecCCCccCCCeEEeee
Confidence 34455666677777776665666665532 34455552 689999999999999999999999999999999998
Q ss_pred CeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChHHH
Q 045750 82 HLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDFEK 160 (792)
Q Consensus 82 ~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~~~ 160 (792)
. +||||++||||.|+.|.+|-.. +-+-.||++++.+.+..++....+|++.++....+..+ +++|-+.
T Consensus 148 a-sVdESAITGESaPViresGgD~----------ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEI 216 (681)
T COG2216 148 A-SVDESAITGESAPVIRESGGDF----------SSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEI 216 (681)
T ss_pred e-ecchhhccCCCcceeeccCCCc----------ccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHH
Confidence 7 9999999999999999998432 23889999999999999999999999999998887432 2333344
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhc
Q 045750 161 GVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRD 240 (792)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~ 240 (792)
.++.+..-+..+.++.....+-+..+.+ .-.-.+...++++++++|-...-.++..-..|+.|+.+.|++.++..++|.
T Consensus 217 AL~iLL~~LTliFL~~~~Tl~p~a~y~~-g~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEa 295 (681)
T COG2216 217 ALTILLSGLTLIFLLAVATLYPFAIYSG-GGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEA 295 (681)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHcC-CCCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhh
Confidence 3443332222222221111111111111 111345566788899999998888888778899999999999999999999
Q ss_pred ccceeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccce-EeEE
Q 045750 241 MGTMDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWK-KLDE 319 (792)
Q Consensus 241 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~-~~~~ 319 (792)
.|.+|++..|||||+|.|+-.-.++++.++.+.+++.+.|.+++.. ...|..+.|++.+++.+......... ....
T Consensus 296 aGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~~~~la~aa~lsSl~---DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~f 372 (681)
T COG2216 296 AGDVDTLLLDKTGTITLGNRQASEFIPVPGVSEEELADAAQLASLA---DETPEGRSIVELAKKLGIELREDDLQSHAEF 372 (681)
T ss_pred cCCccEEEecccCceeecchhhhheecCCCCCHHHHHHHHHHhhhc---cCCCCcccHHHHHHHhccCCCccccccccee
Confidence 9999999999999999999999999999999999999998776543 45688899999999988776555544 3678
Q ss_pred eCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCe
Q 045750 320 IPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLR 399 (792)
Q Consensus 320 ~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r 399 (792)
+||+.+.+++.+-... ...+-||+.+.+.++-+.. +|. ..++++...++.++.|=.
T Consensus 373 vpFtA~TRmSGvd~~~-------------~~~irKGA~dai~~~v~~~----~g~-------~p~~l~~~~~~vs~~GGT 428 (681)
T COG2216 373 VPFTAQTRMSGVDLPG-------------GREIRKGAVDAIRRYVRER----GGH-------IPEDLDAAVDEVSRLGGT 428 (681)
T ss_pred eecceecccccccCCC-------------CceeecccHHHHHHHHHhc----CCC-------CCHHHHHHHHHHHhcCCC
Confidence 9999998887775432 2467799999999876622 121 124456667888899999
Q ss_pred eEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 045750 400 VIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT 479 (792)
Q Consensus 400 vl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~ 479 (792)
.++++. |..++|.+.++|-++|+.+|-+.+||+.|||.+|+||||+.||..+|++.|+++
T Consensus 429 PL~V~~--------------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd 488 (681)
T COG2216 429 PLVVVE--------------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD 488 (681)
T ss_pred ceEEEE--------------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh
Confidence 998875 348999999999999999999999999999999999999999999999999986
Q ss_pred CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHH
Q 045750 480 THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAK 559 (792)
Q Consensus 480 ~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~ 559 (792)
..++++|++|.+.++.-|..| +.|+|+|||.||+|+|.+||||+||.+|++.+|
T Consensus 489 -------------------------fiAeatPEdK~~~I~~eQ~~g-rlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAk 542 (681)
T COG2216 489 -------------------------FIAEATPEDKLALIRQEQAEG-RLVAMTGDGTNDAPALAQADVGVAMNSGTQAAK 542 (681)
T ss_pred -------------------------hhhcCChHHHHHHHHHHHhcC-cEEEEcCCCCCcchhhhhcchhhhhccccHHHH
Confidence 779999999999999999999 999999999999999999999999999999999
Q ss_pred hhcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHHHHHHH
Q 045750 560 DLADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMSIIANL 600 (792)
Q Consensus 560 ~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~~~ 600 (792)
+++..|=+|+|...+.+.++.|+++.-.=-..-.|++..-+
T Consensus 543 EAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIANDv 583 (681)
T COG2216 543 EAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIANDV 583 (681)
T ss_pred HhhcccccCCCccceehHhhhhhhheeecccceeeehhhHH
Confidence 99999999999999999999999876443333345554443
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1.1e-35 Score=301.79 Aligned_cols=224 Identities=35% Similarity=0.531 Sum_probs=199.3
Q ss_pred eEEEehHhHHHHHHHHhHHHHHHHHhccCCCC-eEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEe
Q 045750 2 LALVLISVCLRFYQEYGSSKAAMKLSEFVRCP-IKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTS 80 (792)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~ 80 (792)
+++++++..+++++++|+++..+++++..+++ ++|.| ||++++++++||+|||+|.+++||++||||++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r-------~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~ 75 (230)
T PF00122_consen 3 LFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIR-------DGRWQKIPSSELVPGDIIILKAGDIVPADGILLES 75 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEE-------TTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEES
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEe-------ccccccchHhhccceeeeecccccccccCccceec
Confidence 45678899999999999999999999988887 89999 99999999999999999999999999999999994
Q ss_pred CCeEEEeccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCC-CCChHH
Q 045750 81 KHLVVSQSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQK-PPDDFE 159 (792)
Q Consensus 81 ~~~~Vdes~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~-~~~~~~ 159 (792)
+.+.||||.+|||+.|+.|.+. ..+.+|++|+||.+.+|+++++|++||.+|+.+++.+.....+ ++++++
T Consensus 76 g~~~vd~s~ltGes~pv~k~~~--------~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~ 147 (230)
T PF00122_consen 76 GSAYVDESALTGESEPVKKTPL--------PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLE 147 (230)
T ss_dssp SEEEEECHHHHSBSSEEEESSS--------CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHH
T ss_pred cccccccccccccccccccccc--------cccccchhhccccccccccccccceeeecccccccccccccccccchhhh
Confidence 4579999999999999999853 3455699999999999999999999999999999999886654 458899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcc--cccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhcCCccccchh
Q 045750 160 KGVRRISFVLICVMLIVATIIILIDYF--TSKNLSESILFGISVACALTPQMFPLIVNTSLAKGALAMARDRCVVKSLGA 237 (792)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~ 237 (792)
+.++++..++++++++++++.++++++ ...+|...+..++++++.++|++||+++++++..++.+++++|+++|++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a 227 (230)
T PF00122_consen 148 RKLNKIAKILIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSA 227 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTH
T ss_pred hhhHHHHHHHHhcccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCccc
Confidence 999999999888888888777777666 667899999999999999999999999999999999999999999999999
Q ss_pred hhc
Q 045750 238 IRD 240 (792)
Q Consensus 238 ~e~ 240 (792)
+|+
T Consensus 228 ~E~ 230 (230)
T PF00122_consen 228 LEA 230 (230)
T ss_dssp HHH
T ss_pred ccC
Confidence 984
No 35
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.93 E-value=1.1e-24 Score=229.22 Aligned_cols=431 Identities=15% Similarity=0.156 Sum_probs=270.4
Q ss_pred CChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEEEEEecC-----------------CCcc----
Q 045750 355 GALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGVAVKRLL-----------------PQKS---- 413 (792)
Q Consensus 355 G~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~-----------------~~~~---- 413 (792)
|-.+.+.+.|+.+ |++-+..|++..+++++.+.+..-...| .++++|||+.. ++..
T Consensus 698 g~ad~~~eACTdf--WdGadi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T 774 (1354)
T KOG4383|consen 698 GFADFFEEACTDF--WDGADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIET 774 (1354)
T ss_pred cHHHHHHHHhhhh--cCCceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhh
Confidence 6678889999999 6888899999999999999998888888 57899999641 0000
Q ss_pred ----------------ccCCCC-----------CCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHH
Q 045750 414 ----------------AQSNRN-----------DGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLS 466 (792)
Q Consensus 414 ----------------~~~~~~-----------~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~ 466 (792)
..++.+ .++.-.+..|.|++..+.+.+++....|+.|.++.||++.+|-+++.
T Consensus 775 ~celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdEL 854 (1354)
T KOG4383|consen 775 ACELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDEL 854 (1354)
T ss_pred hccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHH
Confidence 000000 01223456899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCC----------ccccch----------------------------hhhcc-----------------
Q 045750 467 LAIKICHEVGIRTT----------HVSTGP----------------------------DLELL----------------- 491 (792)
Q Consensus 467 ~a~~ia~~~gi~~~----------~~~~g~----------------------------~~~~~----------------- 491 (792)
..+-+|.++||..+ .-..|. +...+
T Consensus 855 kSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ds 934 (1354)
T KOG4383|consen 855 KSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDS 934 (1354)
T ss_pred HHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccccc
Confidence 99999999999210 000000 00000
Q ss_pred -----------------------CHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccH--HHHHhCC
Q 045750 492 -----------------------SQESFHERVKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDS--LALDAAN 546 (792)
Q Consensus 492 -----------------------~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~--~~l~~A~ 546 (792)
+.++++++..-+-.|.+++|+...++++.+|++| ++++.+|...|-- -.+-+||
T Consensus 935 di~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~G-EVtcclGS~aN~rNSciflkad 1013 (1354)
T KOG4383|consen 935 DIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENG-EVTCCLGSCANARNSCIFLKAD 1013 (1354)
T ss_pred chhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcC-cEEEEeccccccccceEEEccc
Confidence 0112222233456899999999999999999999 9999999998843 3457899
Q ss_pred eeEEecC-------------CcHH-HHh-----------------hcCEEeccCCchHHHHHHHHhHHhHHhHHHHHHHH
Q 045750 547 VGISVDS-------------GASV-AKD-----------------LADIILLEKDLNVLVAGVERGRVTFGNTMKYIKMS 595 (792)
Q Consensus 547 vgia~~~-------------~~~~-~~~-----------------~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 595 (792)
++||+.. ++.. ..+ ++|+.+.....-.+..+|+.+|+....+|+++.|.
T Consensus 1014 ISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFi 1093 (1354)
T KOG4383|consen 1014 ISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFI 1093 (1354)
T ss_pred eeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 9999831 0100 111 23444444445567889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhh-hhhhh-cccCCCCccccCC--CCC-------CCCCCcchhhhh
Q 045750 596 IIANLGGVLSLLIATMFLQTDPLTPKQLLTQNFLYS-VGQIA-IPWDKMEGDYVKT--PQI-------WSENGLPMFILF 664 (792)
Q Consensus 596 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~-~~~~~~~~~~m~~--p~~-------~~~~~l~~~~~~ 664 (792)
+.+.+...+..+++.+++.|+.|+..+++|..++-. +..++ +...++.+.+|.+ |.. -+.+.+..+++-
T Consensus 1094 Lq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~maagKNlqeIPKk~kh~fllcFilk 1173 (1354)
T KOG4383|consen 1094 LQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIMAAGKNLQEIPKKEKHKFLLCFILK 1173 (1354)
T ss_pred HHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEeeccCChhhcccHHHHHHHHHHHHH
Confidence 999998888888888888888899999999988754 55555 3333444444432 221 112223333332
Q ss_pred hhhHHHHHHHHHHHHHHHHhhh---------------c--ccch----------HHHHHHHHHHHHHHHHHHHHH--HHh
Q 045750 665 NGPVCILCDVTALFFLWFYYEA---------------Y--NQMN----------VVFFRSAWFVEGLLMQTLIIH--LIR 715 (792)
Q Consensus 665 ~g~~~a~~~~~~~~~~~~~~~~---------------~--~~~~----------~~~~~t~~f~~lv~~q~~~~~--~~r 715 (792)
..+ .+...+..|.+.+..+.. . ++.. ...+|-..-..+++..++... ..+
T Consensus 1174 Fsl-s~ssclIcFgf~L~afcd~~~d~n~~nC~~~m~~S~ddqa~a~FedfangL~saQkl~aa~iilH~ifiqIThih~ 1252 (1354)
T KOG4383|consen 1174 FSL-SASSCLICFGFLLMAFCDLMCDFNDINCLFNMDGSADDQALAEFEDFANGLGSAQKLLAAEIILHIIFIQITHIHC 1252 (1354)
T ss_pred hhh-hHHHHHHHHHHHHHHhhhhhccccccceeeccCCCcCcccchhHHHHHhhhhhHHHHHHHHHHHHhheeEEEEEEE
Confidence 222 222222223222221110 0 0000 111121111122222222111 122
Q ss_pred cCCcccccccchHHH-------HHHHHHHHHHHHHhhhcc-ccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045750 716 TEKIPFIQEVASWPV-------LSSTLVISAIGIAIPFTA-IGDVMGFTELPLTYFGFLLLLFIGYFTVGQLVKRIYILI 787 (792)
Q Consensus 716 ~~~~~~~~~~~n~~l-------~~~~~~~~~l~~~~~~~p-l~~~f~~~~l~~~~w~~~l~~~~~~l~~~e~iK~~~~~~ 787 (792)
+...+|.++..|.|| .+..++..++...+-+-- -+.-||....|..-|++..++...+.+.+|++|...+|.
T Consensus 1253 tkpl~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~thrd~~VHfgldd~pLL~~~igcisi~iiVitNEiiKiheIR~ 1332 (1354)
T KOG4383|consen 1253 TKPLSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTHRDRGVHFGLDDFPLLPLGIGCISICIIVITNEIIKIHEIRQ 1332 (1354)
T ss_pred ecchhhhcccchheeecccceeehhhHHHHHHhhhhhhccccceeeccccchhHHHHHHHHheeeeeehhhHHHHHHHHH
Confidence 333333334334333 233333333333332222 334478888888889998888888889999999887776
Q ss_pred hcc
Q 045750 788 YKK 790 (792)
Q Consensus 788 ~~~ 790 (792)
|.|
T Consensus 1333 ~~R 1335 (1354)
T KOG4383|consen 1333 FTR 1335 (1354)
T ss_pred HHH
Confidence 543
No 36
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.90 E-value=6.9e-24 Score=213.47 Aligned_cols=211 Identities=33% Similarity=0.477 Sum_probs=152.3
Q ss_pred eeEEEeccccccccCceEEEEeeCCCCCCcHHHHHHHHhhccccCCCCCchHHHHHHHHHhcCcccccccceEeEEeCCC
Q 045750 244 MDILCIDKTGTLTMDRAIMVNHLDSWGFPKENVLRFAFLNSYYKTDQKYPLDDAILAYVYTNGYRFQASKWKKLDEIPFD 323 (792)
Q Consensus 244 v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~f~ 323 (792)
+++||||||||||++++.+ . . ...+..+..+ ...+..+.||.+.++..++...... ........++
T Consensus 1 i~~i~fDktGTLt~~~~~v--~-~---~~~~~~~~~~---~~~~~~s~~p~~~~~~~~~~~~~~~---~~~~~~~~~~-- 66 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV--A-P---PSNEAALAIA---AALEQGSEHPIGKAIVEFAKNHQWS---KSLESFSEFI-- 66 (215)
T ss_dssp ESEEEEECCTTTBESHHEE--E-S---CSHHHHHHHH---HHHHCTSTSHHHHHHHHHHHHHHHH---SCCEEEEEET--
T ss_pred CeEEEEecCCCcccCeEEE--E-e---ccHHHHHHHH---HHhhhcCCCcchhhhhhhhhhccch---hhhhhheeee--
Confidence 6899999999999999999 1 1 4455555555 4456788999999999998653221 0012222222
Q ss_pred CCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhcccccccCCCCcccCCHHHHHHHHHHHHHHhhccCeeEEE
Q 045750 324 FVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVCSFVEHMDSGPITSFTSEEQKRILNLGEELSNEGLRVIGV 403 (792)
Q Consensus 324 ~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rvl~~ 403 (792)
.+.....+. .. +. |.++.+.+..... ............+|.+.+.+
T Consensus 67 --~~~~~~~~~-------------~~--~~-g~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~ 112 (215)
T PF00702_consen 67 --GRGISGDVD-------------GI--YL-GSPEWIHELGIRV----------------ISPDLVEEIQESQGRTVIVL 112 (215)
T ss_dssp --TTEEEEEEH-------------CH--EE-HHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHCEEE
T ss_pred --ecccccccc-------------cc--cc-ccchhhhhccccc----------------cccchhhhHHHhhCCcccce
Confidence 111111110 11 22 7776665544321 01111222234556566655
Q ss_pred EEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccc
Q 045750 404 AVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVS 483 (792)
Q Consensus 404 a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~ 483 (792)
+. +..++|.+.+.|++||+++++|+.|+++|++++|+|||+..++..+++++||...
T Consensus 113 ~~--------------------~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~--- 169 (215)
T PF00702_consen 113 AV--------------------NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS--- 169 (215)
T ss_dssp EE--------------------SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE---
T ss_pred ee--------------------cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc---
Confidence 53 4589999999999999999999999999999999999999999999999999543
Q ss_pred cchhhhccCHHHHHHhhhcceEEEEe--ChhhH--HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCC
Q 045750 484 TGPDLELLSQESFHERVKRATVLARL--TPTQK--LRVVQSLQSVGKHVVGFLGDGINDSLALDAAN 546 (792)
Q Consensus 484 ~g~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K--~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~ 546 (792)
.+|++. +|++| .++++.++..+ +.|+|+|||.||++|+++||
T Consensus 170 --------------------~v~a~~~~kP~~k~~~~~i~~l~~~~-~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 --------------------IVFARVIGKPEPKIFLRIIKELQVKP-GEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp --------------------EEEESHETTTHHHHHHHHHHHHTCTG-GGEEEEESSGGHHHHHHHSS
T ss_pred --------------------cccccccccccchhHHHHHHHHhcCC-CEEEEEccCHHHHHHHHhCc
Confidence 389999 99999 99999999777 68999999999999999997
No 37
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.82 E-value=1e-19 Score=177.48 Aligned_cols=169 Identities=22% Similarity=0.261 Sum_probs=129.5
Q ss_pred CCCchHHHHHHHHHHhh-hhhhhcccCCCCccccCCCCCCCCCC-----cchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 045750 615 TDPLTPKQLLTQNFLYS-VGQIAIPWDKMEGDYVKTPQIWSENG-----LPMFILFNGPVCILCDVTALFFLWFYYEAYN 688 (792)
Q Consensus 615 ~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~m~~p~~~~~~~-----l~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~ 688 (792)
|.|++|.|++|+|+++| +|+++++.|++|+++|++|||.++.. ++......|+.+++.++.+|+......+...
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 56999999999999999 67999999999999999988855432 3344556666666666666655544332222
Q ss_pred cc---hHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--c-cchHHHHHHHHHHHHHHHHhhhcc-ccccccccccChh
Q 045750 689 QM---NVVFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQ--E-VASWPVLSSTLVISAIGIAIPFTA-IGDVMGFTELPLT 761 (792)
Q Consensus 689 ~~---~~~~~~t~~f~~lv~~q~~~~~~~r~~~~~~~~--~-~~n~~l~~~~~~~~~l~~~~~~~p-l~~~f~~~~l~~~ 761 (792)
.. +...++|++|.+++++|+++.+.+|+++.+.++ + +.|+.+++++++..+++.++.|+| ++.+|++.++++.
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~~ 160 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPLW 160 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----THH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCHH
Confidence 11 256799999999999999999999997776655 3 579999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 045750 762 YFGFLLLLFIGYFTVGQLVKRI 783 (792)
Q Consensus 762 ~w~~~l~~~~~~l~~~e~iK~~ 783 (792)
+|+++++.+++.+++.|++|++
T Consensus 161 ~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 161 QWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999975
No 38
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.64 E-value=1.4e-15 Score=128.82 Aligned_cols=124 Identities=23% Similarity=0.274 Sum_probs=110.3
Q ss_pred cEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEE
Q 045750 427 MVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVL 506 (792)
Q Consensus 427 l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 506 (792)
+...+.++-.-.+=++++++|++|++. +++++.|||...+....|+..|++... +|
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r-----------------------v~ 74 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER-----------------------VF 74 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee-----------------------ee
Confidence 367788888899999999999999999 999999999999999999999997654 89
Q ss_pred EEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe-c--CCcHHHHhhcCEEeccCCchHHHHH
Q 045750 507 ARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV-D--SGASVAKDLADIILLEKDLNVLVAG 577 (792)
Q Consensus 507 ~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~-~--~~~~~~~~~ad~vl~~~~~~~i~~~ 577 (792)
+...|+.|.++++.|++.+ +.|.|+|||.||.+||+.||+||+. + +.++.+..+||+++. +...++++
T Consensus 75 a~a~~e~K~~ii~eLkk~~-~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl 145 (152)
T COG4087 75 AGADPEMKAKIIRELKKRY-EKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDL 145 (152)
T ss_pred cccCHHHHHHHHHHhcCCC-cEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHH
Confidence 9999999999999999988 8999999999999999999999986 3 677888899999983 44444443
No 39
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.37 E-value=6.1e-12 Score=131.10 Aligned_cols=68 Identities=22% Similarity=0.236 Sum_probs=57.9
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.|..-++.+.++- .+.|+++|||.||++||+.|++|+||+|+.+.+|+.||+|+.+++.++|.++|++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 4555555555432 1568999999999999999999999999999999999999999999999998864
No 40
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.35 E-value=8.6e-12 Score=129.41 Aligned_cols=150 Identities=28% Similarity=0.366 Sum_probs=107.5
Q ss_pred EecccCCC-CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-Cccccchhhh---------ccC-------
Q 045750 431 GLITFYDP-PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT-THVSTGPDLE---------LLS------- 492 (792)
Q Consensus 431 G~i~~~d~-~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~-~~~~~g~~~~---------~~~------- 492 (792)
|++.-.+. +.+.++++|++++++|++++++|||+...+..+.+++|+.. -....|..+. .++
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 33333443 99999999999999999999999999999999999999942 0001110000 000
Q ss_pred ------------------------------------------------------------HHHHHH---hhh-----cce
Q 045750 493 ------------------------------------------------------------QESFHE---RVK-----RAT 504 (792)
Q Consensus 493 ------------------------------------------------------------~~~~~~---~~~-----~~~ 504 (792)
.+...+ .+. ...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 001111 010 111
Q ss_pred EEEE-------eCh--hhHHHHHHHHhhc-C--CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCch
Q 045750 505 VLAR-------LTP--TQKLRVVQSLQSV-G--KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLN 572 (792)
Q Consensus 505 v~~~-------~~p--~~K~~iv~~l~~~-~--~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~ 572 (792)
.+.+ ..| .+|...++.+.++ | .+.|+++||+.||.+||+.|+.||||+|+++.+|+.||+++.+++.+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 2222 222 3688888877774 2 14599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 045750 573 VLVAGVER 580 (792)
Q Consensus 573 ~i~~~i~~ 580 (792)
+|.++|++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99999976
No 41
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.34 E-value=7.8e-12 Score=130.28 Aligned_cols=144 Identities=13% Similarity=0.149 Sum_probs=100.9
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCcc-ccchhhh----------cc--------------
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHV-STGPDLE----------LL-------------- 491 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~-~~g~~~~----------~~-------------- 491 (792)
..+.+.++++|++++++|++++++|||+...+..+.+++|++...+ ..|..+. .+
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~ 97 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWD 97 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhh
Confidence 3699999999999999999999999999999999999999831100 0000000 00
Q ss_pred -----------------------------------------------------CHHH---HHHhhh-----cceE-----
Q 045750 492 -----------------------------------------------------SQES---FHERVK-----RATV----- 505 (792)
Q Consensus 492 -----------------------------------------------------~~~~---~~~~~~-----~~~v----- 505 (792)
..+. +.+.+. ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 177 (272)
T PRK15126 98 TRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSAT 177 (272)
T ss_pred cCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 0000 000000 0011
Q ss_pred -EEEeCh--hhHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCE--EeccCCchHHHHH
Q 045750 506 -LARLTP--TQKLRVVQSLQSVGK---HVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADI--ILLEKDLNVLVAG 577 (792)
Q Consensus 506 -~~~~~p--~~K~~iv~~l~~~~~---~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~--vl~~~~~~~i~~~ 577 (792)
+...+| ..|..-++.+.++-+ +.|+++|||.||++||+.|+.|+||+|+.+.+|+.||+ |+.+++.++|.++
T Consensus 178 ~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 178 DCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred cEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHH
Confidence 112222 246666666665421 56899999999999999999999999999999999996 7778899999988
Q ss_pred HHH
Q 045750 578 VER 580 (792)
Q Consensus 578 i~~ 580 (792)
|++
T Consensus 258 l~~ 260 (272)
T PRK15126 258 LTH 260 (272)
T ss_pred HHH
Confidence 854
No 42
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.33 E-value=1.4e-11 Score=125.05 Aligned_cols=143 Identities=20% Similarity=0.234 Sum_probs=103.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCc-------ccc---chhhhcc----------------
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH-------VST---GPDLELL---------------- 491 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~-------~~~---g~~~~~~---------------- 491 (792)
++.|.+.++|++++++|++++++|||+...+..+++.+|++... +.. ++.+...
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 47899999999999999999999999999999999999984211 111 1100000
Q ss_pred -------------------------CHHHHHHhhhc----ceE-----EEEeChh--hHHHHHHHHhhcC---CCEEEEE
Q 045750 492 -------------------------SQESFHERVKR----ATV-----LARLTPT--QKLRVVQSLQSVG---KHVVGFL 532 (792)
Q Consensus 492 -------------------------~~~~~~~~~~~----~~v-----~~~~~p~--~K~~iv~~l~~~~---~~~v~~i 532 (792)
..+++.+.+.+ ..+ +....|. .|...++.+.++- .+.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 00111111110 111 1223332 3777777776542 1568999
Q ss_pred cCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 533 GDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 533 GDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
||+.||.+|++.|++|+||+|+.+.+|+.||+|+.+++.+++.++|++
T Consensus 180 GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred CCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHHH
Confidence 999999999999999999999999999999999999999999998864
No 43
>PRK10976 putative hydrolase; Provisional
Probab=99.32 E-value=1.4e-11 Score=128.00 Aligned_cols=68 Identities=18% Similarity=0.164 Sum_probs=56.8
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcC--EEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLAD--IILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad--~vl~~~~~~~i~~~i~~ 580 (792)
.|..-++.+.++- .+.|+++||+.||++||+.|+.|+||+|+.+.+|+.|| .|+.+++.++|.++|++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~ 262 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRK 262 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHH
Confidence 4555555555432 15689999999999999999999999999999999988 78889999999998864
No 44
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.29 E-value=1.8e-11 Score=122.81 Aligned_cols=141 Identities=19% Similarity=0.225 Sum_probs=101.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCcc-ccchhhh---------ccC---------------
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHV-STGPDLE---------LLS--------------- 492 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~-~~g~~~~---------~~~--------------- 492 (792)
++.|.+.++|++++++|++++++|||++..+..++++++++...+ ..|..+. ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 589999999999999999999999999999999999999852111 1111000 000
Q ss_pred --------------------HHHHHHhhhc--ceE-----EEEeC--hhhHHHHHHHHhhcCC---CEEEEEcCCcccHH
Q 045750 493 --------------------QESFHERVKR--ATV-----LARLT--PTQKLRVVQSLQSVGK---HVVGFLGDGINDSL 540 (792)
Q Consensus 493 --------------------~~~~~~~~~~--~~v-----~~~~~--p~~K~~iv~~l~~~~~---~~v~~iGDg~ND~~ 540 (792)
.+.+.+.+.. ..+ +...+ ...|...++.+.++-+ +.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0011111111 011 11222 3478888877766421 45899999999999
Q ss_pred HHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 541 ALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 541 ~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
|++.|++|+||+|+.+.+|+.||+|+.+++.++|.++|
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 99999999999999999999999999988888887653
No 45
>PLN02887 hydrolase family protein
Probab=99.25 E-value=5.4e-11 Score=133.47 Aligned_cols=54 Identities=30% Similarity=0.453 Sum_probs=51.2
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 527 HVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 527 ~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
+.|+++|||.||++||+.|+.||||+||.+.+|+.||+|+.+++.++|.++|++
T Consensus 524 eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 524 DEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred HHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999864
No 46
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.25 E-value=7.3e-11 Score=121.70 Aligned_cols=143 Identities=20% Similarity=0.217 Sum_probs=102.2
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-Cccccchhh----------hccC------------
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT-THVSTGPDL----------ELLS------------ 492 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~-~~~~~g~~~----------~~~~------------ 492 (792)
...+.|.+.++|++++++|++++++|||++..+..+.+++++.. ....+|.-+ ..++
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 45688999999999999999999999999999999999999841 111111111 0000
Q ss_pred ---------------------------------------------------------HHH-------HHHhhhcceEEE-
Q 045750 493 ---------------------------------------------------------QES-------FHERVKRATVLA- 507 (792)
Q Consensus 493 ---------------------------------------------------------~~~-------~~~~~~~~~v~~- 507 (792)
.+. +.+.......+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 000 111111111111
Q ss_pred ------Ee--ChhhHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHH
Q 045750 508 ------RL--TPTQKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVA 576 (792)
Q Consensus 508 ------~~--~p~~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~ 576 (792)
.. ....|...++.+.+.- .+.++++||+.||.+||+.||.|+||+|+++.+++.||+++.+++-++|.+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 12 2356888777777531 167889999999999999999999999999999999999999888899988
Q ss_pred HH
Q 045750 577 GV 578 (792)
Q Consensus 577 ~i 578 (792)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 75
No 47
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.23 E-value=7.9e-11 Score=119.17 Aligned_cols=142 Identities=19% Similarity=0.237 Sum_probs=101.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCcc-ccchhh-----------hccC-------------
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHV-STGPDL-----------ELLS------------- 492 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~-~~g~~~-----------~~~~------------- 492 (792)
.+.+.++++|++++++|++++++|||+...+..+.+++|+....+ ..|..+ ..+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 588999999999999999999999999999999999999732111 011100 0000
Q ss_pred -----------------------HHHHHHhhhc----ceE-----EEEeCh--hhHHHHHHHHhhcC---CCEEEEEcCC
Q 045750 493 -----------------------QESFHERVKR----ATV-----LARLTP--TQKLRVVQSLQSVG---KHVVGFLGDG 535 (792)
Q Consensus 493 -----------------------~~~~~~~~~~----~~v-----~~~~~p--~~K~~iv~~l~~~~---~~~v~~iGDg 535 (792)
.+........ ..+ +....| ..|...++.+.++- .+.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0001111110 001 122223 46877777776642 1568999999
Q ss_pred cccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchH----HHHHHH
Q 045750 536 INDSLALDAANVGISVDSGASVAKDLADIILLEKDLNV----LVAGVE 579 (792)
Q Consensus 536 ~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~----i~~~i~ 579 (792)
.||++|++.|++|+||+|+.+.+|+.||+|+.+++.++ +.+.++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999889999 766664
No 48
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.20 E-value=1.2e-10 Score=121.49 Aligned_cols=68 Identities=19% Similarity=0.249 Sum_probs=57.1
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 580 (792)
.|...++.+.++- .+.++++||+.||++|++.|++|+||+|+.+.+|+.||+++.+++.++|.++|++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHHH
Confidence 4555555554431 1568999999999999999999999999999999999999999999999998863
No 49
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.18 E-value=2e-10 Score=120.56 Aligned_cols=128 Identities=17% Similarity=0.230 Sum_probs=99.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEE-----eChh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLAR-----LTPT 512 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~-----~~p~ 512 (792)
++.|++.+.++.|++.|+++.++||.....+..+.+++|++... . ..++..+ ..+-.+ +..+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~--a-n~lei~d----------g~ltg~v~g~iv~~k 247 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAV--A-NELEIMD----------GKLTGNVLGDIVDAQ 247 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEE--E-eEEEEEC----------CEEEeEecCccCCcc
Confidence 57999999999999999999999999988899999999985411 1 0000000 001011 2346
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
.|.+.++.+.++. .+.++++|||.||++|++.||+|||+ |+.+.+++.||.++..++++++..++-
T Consensus 248 ~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 248 YKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 7888888877652 26789999999999999999999999 999999999999999999999877653
No 50
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.12 E-value=3.6e-10 Score=110.97 Aligned_cols=131 Identities=18% Similarity=0.120 Sum_probs=96.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
++.|++++.|+.+++.| +++++||-....+..+++++|++.. +..+ +..-+.. .+... . ...++.|...
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~--~an~-l~~~~~g----~~tG~-~--~~~~~~K~~~ 136 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTL--LCHK-LEIDDSD----RVVGY-Q--LRQKDPKRQS 136 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchh--hcee-eEEecCC----eeECe-e--ecCcchHHHH
Confidence 68999999999999985 9999999999999999999999631 1110 0000000 00000 0 1357789999
Q ss_pred HHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHh
Q 045750 518 VQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERG 581 (792)
Q Consensus 518 v~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~g 581 (792)
++.+++.+ ..+.++|||.||++|++.||+|+++. +.+.+++.||-...-.+.+.+..++.++
T Consensus 137 l~~l~~~~-~~~v~vGDs~nDl~ml~~Ag~~ia~~-ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 137 VIAFKSLY-YRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred HHHHHhhC-CCEEEEeCCHHHHHHHHhCCCCEEec-CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 99998877 68899999999999999999999995 4455555565544445777777777665
No 51
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.11 E-value=3.3e-10 Score=107.09 Aligned_cols=104 Identities=12% Similarity=0.181 Sum_probs=83.9
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEe--ChhhHHHHHHHHh
Q 045750 445 QALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARL--TPTQKLRVVQSLQ 522 (792)
Q Consensus 445 ~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K~~iv~~l~ 522 (792)
.+|+.|+++|+++.++|+.+...+....+++|+.. .|... .|+....+++.++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~-------------------------~f~~~kpkp~~~~~~~~~l~ 95 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR-------------------------FHEGIKKKTEPYAQMLEEMN 95 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE-------------------------EEecCCCCHHHHHHHHHHcC
Confidence 47999999999999999999999999999999963 33322 2333344444443
Q ss_pred hcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHH
Q 045750 523 SVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVL 574 (792)
Q Consensus 523 ~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i 574 (792)
-.. +.++++||+.||++|++.|++++||+|+.+.+++.|++|+.+++-.+.
T Consensus 96 ~~~-~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 96 ISD-AEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred cCH-HHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 333 679999999999999999999999999999999999999876665543
No 52
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.07 E-value=2.2e-09 Score=110.66 Aligned_cols=142 Identities=17% Similarity=0.113 Sum_probs=96.5
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC-------ccccch--h------h--hccCHHHHH----
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT-------HVSTGP--D------L--ELLSQESFH---- 497 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~-------~~~~g~--~------~--~~~~~~~~~---- 497 (792)
..+.+.++|++++++|++++++|||+...+..+.+++|+... .+.... . + ..++.+...
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 455799999999999999999999999999999999998321 111100 0 0 001100000
Q ss_pred -------------------------------------------------------Hhhhc--ceE-----EEEeCh--hh
Q 045750 498 -------------------------------------------------------ERVKR--ATV-----LARLTP--TQ 513 (792)
Q Consensus 498 -------------------------------------------------------~~~~~--~~v-----~~~~~p--~~ 513 (792)
+.+.+ ..+ +....| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 00000 000 111112 35
Q ss_pred HHHHHHHHhhcC-----CCEEEEEcCCcccHHHHHhCCeeEEecCCc---HHHHhh--c-CEEeccCCchHHHHHHHH
Q 045750 514 KLRVVQSLQSVG-----KHVVGFLGDGINDSLALDAANVGISVDSGA---SVAKDL--A-DIILLEKDLNVLVAGVER 580 (792)
Q Consensus 514 K~~iv~~l~~~~-----~~~v~~iGDg~ND~~~l~~A~vgia~~~~~---~~~~~~--a-d~vl~~~~~~~i~~~i~~ 580 (792)
|...++.+.++- .+.++++||+.||.+|++.||.||||+|+. +.+|+. | ++|+.+++-+||.+++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 666666555431 367999999999999999999999999987 478887 4 599999999999998864
No 53
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.05 E-value=1.3e-09 Score=112.63 Aligned_cols=66 Identities=27% Similarity=0.294 Sum_probs=56.6
Q ss_pred hHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 513 QKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 513 ~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.|..-++.+.+.. .+.++++||+.||++|++.|+.|+||+++++.+|+.||+++.+++.++|.++|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 5777777766542 15689999999999999999999999999999999999999999999987653
No 54
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.05 E-value=2.3e-09 Score=111.47 Aligned_cols=143 Identities=15% Similarity=0.110 Sum_probs=95.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--Cccccchhhh----------------ccCHHHHHHh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLE----------------LLSQESFHER 499 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~----------------~~~~~~~~~~ 499 (792)
.+.+.++++|++++++|++++++|||+...+..+++++|++. -....|..+. .++.+...++
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i 103 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQV 103 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHH
Confidence 456889999999999999999999999999999999999841 1111111000 0111000000
Q ss_pred -------------------------------------------------------------hh--cceE-----EEEeCh
Q 045750 500 -------------------------------------------------------------VK--RATV-----LARLTP 511 (792)
Q Consensus 500 -------------------------------------------------------------~~--~~~v-----~~~~~p 511 (792)
+. ...+ +....|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~ 183 (271)
T PRK03669 104 LNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLD 183 (271)
T ss_pred HHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEec
Confidence 00 0000 112222
Q ss_pred --hhHHHHHHHHhhc------CCCEEEEEcCCcccHHHHHhCCeeEEecCCc-HH-----HHhhcCEEeccCCchHHHHH
Q 045750 512 --TQKLRVVQSLQSV------GKHVVGFLGDGINDSLALDAANVGISVDSGA-SV-----AKDLADIILLEKDLNVLVAG 577 (792)
Q Consensus 512 --~~K~~iv~~l~~~------~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~-~~-----~~~~ad~vl~~~~~~~i~~~ 577 (792)
.+|..-++.+.++ ....|+++||+.||++||+.|++||||+++. +. .+..+|+++...+-+++.++
T Consensus 184 ~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 263 (271)
T PRK03669 184 ASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREG 263 (271)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence 3466555555442 1167999999999999999999999999554 22 45579999999999999988
Q ss_pred HHH
Q 045750 578 VER 580 (792)
Q Consensus 578 i~~ 580 (792)
+++
T Consensus 264 l~~ 266 (271)
T PRK03669 264 LDH 266 (271)
T ss_pred HHH
Confidence 864
No 55
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.05 E-value=4.5e-10 Score=94.62 Aligned_cols=69 Identities=29% Similarity=0.458 Sum_probs=58.5
Q ss_pred CCCCchHHHHHHHHHhcCcc----cccccceEeEEeCCCCCCCeEEEEEeeCCCCccccCCCCceEEEEeCChHHHHHhc
Q 045750 289 DQKYPLDDAILAYVYTNGYR----FQASKWKKLDEIPFDFVRRKVSVILETESITEDRSSQFSGRFVITKGALEEVIKVC 364 (792)
Q Consensus 289 ~~~~p~~~al~~~~~~~~~~----~~~~~~~~~~~~~f~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~kG~~~~il~~~ 364 (792)
..|+|.|.||+.++...|.. ..+..++.++.+||+|+||+|++++++ ++ .+++++|||||.|+++|
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~~---~~-------~~~~~~KGA~e~il~~C 88 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVRN---DG-------KYILYVKGAPEVILDRC 88 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEeC---CC-------EEEEEcCCChHHHHHhc
Confidence 56899999999999988543 356789999999999999999999982 11 46779999999999999
Q ss_pred ccc
Q 045750 365 SFV 367 (792)
Q Consensus 365 ~~~ 367 (792)
+++
T Consensus 89 t~i 91 (91)
T PF13246_consen 89 THI 91 (91)
T ss_pred CCC
Confidence 853
No 56
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.01 E-value=1.6e-09 Score=101.81 Aligned_cols=106 Identities=17% Similarity=0.260 Sum_probs=85.0
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhh--
Q 045750 446 ALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQS-- 523 (792)
Q Consensus 446 ~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~-- 523 (792)
+|++|+++|+++.++||++...+..+.+++|+.. .|... ..|.+.++.+.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~-------------------------~~~~~--~~k~~~~~~~~~~~ 88 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH-------------------------LYQGQ--SNKLIAFSDILEKL 88 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE-------------------------EEecc--cchHHHHHHHHHHc
Confidence 8999999999999999999999999999999964 22211 234555444433
Q ss_pred --cCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchH-HHHHHH
Q 045750 524 --VGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNV-LVAGVE 579 (792)
Q Consensus 524 --~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~-i~~~i~ 579 (792)
.. +.++++||+.||.+|++.|++++++.++.+..+..+|+++.++.-++ +.++++
T Consensus 89 ~~~~-~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 89 ALAP-ENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred CCCH-HHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 23 67999999999999999999999999999999999999998776444 555543
No 57
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.95 E-value=2.4e-09 Score=95.07 Aligned_cols=115 Identities=18% Similarity=0.304 Sum_probs=94.1
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhc
Q 045750 445 QALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSV 524 (792)
Q Consensus 445 ~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~ 524 (792)
..|+.+.+.|+++.++|||+...+..-|+++||.. +| .-.++|....+.+.+.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~-------------------------~~--qG~~dK~~a~~~L~~~ 94 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH-------------------------LY--QGISDKLAAFEELLKK 94 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce-------------------------ee--echHhHHHHHHHHHHH
Confidence 36899999999999999999999999999999964 22 3346777776666654
Q ss_pred C---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCC----chHHHHHHHHhHHhHH
Q 045750 525 G---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKD----LNVLVAGVERGRVTFG 586 (792)
Q Consensus 525 ~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~----~~~i~~~i~~gR~~~~ 586 (792)
- .+.|+++||..||.|+|++.++++|+.++.+..++.||+|+..+. ...+.++|..++..+.
T Consensus 95 ~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 95 LNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred hCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 2 267999999999999999999999999999999999999997654 4556666666665543
No 58
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.93 E-value=1.4e-08 Score=105.68 Aligned_cols=68 Identities=19% Similarity=0.203 Sum_probs=55.4
Q ss_pred hHHHHHHHHhhc---CC-CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHH----hhc-CEEe--ccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSV---GK-HVVGFLGDGINDSLALDAANVGISVDSGASVAK----DLA-DIIL--LEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~---~~-~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~----~~a-d~vl--~~~~~~~i~~~i~~ 580 (792)
.|...++.+.+. .. +.|+++||+.||++|++.|++|+||+||.+.+| .+| +.++ ..++-+++.+++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 566666666542 33 678999999999999999999999999999999 666 6777 56778899888853
No 59
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.91 E-value=6.1e-09 Score=104.86 Aligned_cols=126 Identities=22% Similarity=0.287 Sum_probs=93.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEE-----eChh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLAR-----LTPT 512 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~-----~~p~ 512 (792)
+++|++++.++.|+++|++++++||.....+..+.+++|+.. +... .+... ...+... ..+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~--~~~~-~~~~~----------~~~~~~~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA--AFAN-RLEVE----------DGKLTGLVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc--eEee-EEEEE----------CCEEEEEecCcccCCc
Confidence 589999999999999999999999999999999999999864 1111 00000 0001111 1123
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHH
Q 045750 513 QKLRVVQSLQSVGK---HVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAG 577 (792)
Q Consensus 513 ~K~~iv~~l~~~~~---~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~ 577 (792)
.|..+++.+.++.+ +.++++||+.||+++.+.||+++++ ++.+..++.||+++.++++..+..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF-NAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe-CCCHHHHHhchhccCCCCHHHHHhh
Confidence 36677766554431 4688999999999999999999998 4678889999999999998877654
No 60
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.90 E-value=7.5e-09 Score=102.12 Aligned_cols=111 Identities=24% Similarity=0.267 Sum_probs=86.3
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCc---------cccchhhhccCHHHHHHhhhcceEEE
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH---------VSTGPDLELLSQESFHERVKRATVLA 507 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~---------~~~g~~~~~~~~~~~~~~~~~~~v~~ 507 (792)
.+++|++.+.++.++++|.+++++||-...-+..+++++|++... .++|. +..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eee
Confidence 678999999999999999999999999999999999999996421 11221 222
Q ss_pred -EeChhhHHHHHHHHhhc-CC--CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEe
Q 045750 508 -RLTPTQKLRVVQSLQSV-GK--HVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIIL 566 (792)
Q Consensus 508 -~~~p~~K~~iv~~l~~~-~~--~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl 566 (792)
.+..+.|.+.++.+.+. |- +.+.++|||.||.|||+.||.+++++ +.+..+..|+...
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n-~~~~l~~~a~~~~ 199 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN-PKPKLRALADVRI 199 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC-cCHHHHHHHHHhc
Confidence 34457888888666653 31 36889999999999999999999995 4455666666544
No 61
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.81 E-value=2.7e-08 Score=96.53 Aligned_cols=111 Identities=15% Similarity=0.226 Sum_probs=85.4
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhc
Q 045750 445 QALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSV 524 (792)
Q Consensus 445 ~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~ 524 (792)
.+|+.++++|+++.++||++...+..+++++|+.. +|. ..+.|...++.+.+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~-------------------------~f~--g~~~k~~~l~~~~~~ 107 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH-------------------------LYQ--GQSNKLIAFSDLLEK 107 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce-------------------------eec--CCCcHHHHHHHHHHH
Confidence 68999999999999999999999999999999864 232 223455555444332
Q ss_pred -C--CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCC----chHHHHHHHHhH
Q 045750 525 -G--KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKD----LNVLVAGVERGR 582 (792)
Q Consensus 525 -~--~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~----~~~i~~~i~~gR 582 (792)
+ .+.++++||+.||++|++.|+++++++++.+..+..+|+++..+. ...+.+.+.+.|
T Consensus 108 ~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 108 LAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred hCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 2 157999999999999999999999999888899999999986443 344444444433
No 62
>PRK08238 hypothetical protein; Validated
Probab=98.76 E-value=4.5e-06 Score=92.58 Aligned_cols=100 Identities=21% Similarity=0.216 Sum_probs=75.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
|++|++.+.+++++++|++++++|+.+...+..+++++|+- +.++.+++. .++.|+.|.+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF-d~Vigsd~~------------------~~~kg~~K~~~ 132 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF-DGVFASDGT------------------TNLKGAAKAAA 132 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-CEEEeCCCc------------------cccCCchHHHH
Confidence 57899999999999999999999999999999999999982 233333211 13456667655
Q ss_pred HHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHH
Q 045750 518 VQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVA 558 (792)
Q Consensus 518 v~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~ 558 (792)
++.. .+.+.+.++||+.+|.+|++.|+-+++++.+....
T Consensus 133 l~~~--l~~~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~ 171 (479)
T PRK08238 133 LVEA--FGERGFDYAGNSAADLPVWAAARRAIVVGASPGVA 171 (479)
T ss_pred HHHH--hCccCeeEecCCHHHHHHHHhCCCeEEECCCHHHH
Confidence 4422 23233578999999999999999999997555433
No 63
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.76 E-value=7e-08 Score=98.21 Aligned_cols=68 Identities=16% Similarity=0.132 Sum_probs=58.2
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcC----EEeccCCchHHHHHHHH
Q 045750 513 QKLRVVQSLQSVGK---HVVGFLGDGINDSLALDAANVGISVDSGASVAKDLAD----IILLEKDLNVLVAGVER 580 (792)
Q Consensus 513 ~K~~iv~~l~~~~~---~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad----~vl~~~~~~~i~~~i~~ 580 (792)
.|...++.+.++-+ ..++++||+.||.+|++.++.|++|+|+.+.+|+.|| +|+.+++-+++.++|++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 56777777665421 3688999999999999999999999999999999999 88888889999999864
No 64
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.67 E-value=1.5e-07 Score=93.67 Aligned_cols=126 Identities=23% Similarity=0.294 Sum_probs=90.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEE--EeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLA--RLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~--~~~p~~K~ 515 (792)
++.|++++.++.|+++ +++.++|+.....+..+.+++|+... +.. .+.... +..+.. ...|..|.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~--f~~-~~~~~~---------~~~i~~~~~~~p~~k~ 134 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTL--FCH-SLEVDE---------DGMITGYDLRQPDGKR 134 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchh--hcc-eEEECC---------CCeEECccccccchHH
Confidence 4689999999999999 99999999999999999999998531 000 000000 000000 12467888
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCE-EeccCCchHHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADI-ILLEKDLNVLVAGVE 579 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~-vl~~~~~~~i~~~i~ 579 (792)
..++.++..+ ..++|+|||.||++|.++|++|+..+...+.....++. ++ +++..+...+.
T Consensus 135 ~~l~~~~~~~-~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 135 QAVKALKSLG-YRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred HHHHHHHHhC-CeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 8889888877 78999999999999999999999987544444445565 43 56666665553
No 65
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.62 E-value=4e-07 Score=93.42 Aligned_cols=145 Identities=16% Similarity=0.089 Sum_probs=99.6
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC---ccccchhhh-----------------------
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT---HVSTGPDLE----------------------- 489 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~---~~~~g~~~~----------------------- 489 (792)
..+..|...+++++++++|++++++|||+....+.+.+++++... ..-.|..+.
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 456789999999999999999999999999999999999988322 001111000
Q ss_pred ---------cc-----------------CHHH----H---HHhhh----cceE-EE-----EeCh--hhHHHHHHHHhhc
Q 045750 490 ---------LL-----------------SQES----F---HERVK----RATV-LA-----RLTP--TQKLRVVQSLQSV 524 (792)
Q Consensus 490 ---------~~-----------------~~~~----~---~~~~~----~~~v-~~-----~~~p--~~K~~iv~~l~~~ 524 (792)
.+ ..+. . .+.+. ...+ .+ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 0000 0 11111 1111 11 2233 4677778777664
Q ss_pred C---CCEEEEEcCCcccHHHHHh-CCeeEEecCCcHHHHhhcC-------EEeccCCchHHHHHHHH
Q 045750 525 G---KHVVGFLGDGINDSLALDA-ANVGISVDSGASVAKDLAD-------IILLEKDLNVLVAGVER 580 (792)
Q Consensus 525 ~---~~~v~~iGDg~ND~~~l~~-A~vgia~~~~~~~~~~~ad-------~vl~~~~~~~i~~~i~~ 580 (792)
- ...++++||+.||++|++. ++.|++|+|+.+.+|+.++ ++.....-+|+.+++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 2 2679999999999999998 6799999999999997654 66666678888888864
No 66
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.60 E-value=2.9e-07 Score=91.27 Aligned_cols=118 Identities=19% Similarity=0.195 Sum_probs=81.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
+++|++.+.++.|+++|++++++|+.....+..+++.+|+... +...-... ... . .....+....|..|.+.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~--~~~~~~~~-~~g----~-~~p~~~~~~~~~~k~~~ 151 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV--YSNELVFD-EKG----F-IQPDGIVRVTFDNKGEA 151 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE--EEEEEEEc-CCC----e-EecceeeEEccccHHHH
Confidence 5899999999999999999999999999999999999998531 11100000 000 0 00001122345667777
Q ss_pred HHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcC
Q 045750 518 VQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLAD 563 (792)
Q Consensus 518 v~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad 563 (792)
++.+.+.. .+.++++||+.||++|+++||++++++......+.++|
T Consensus 152 ~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 152 VERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred HHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 66665432 14688999999999999999999999765555555544
No 67
>PLN02382 probable sucrose-phosphatase
Probab=98.45 E-value=1.5e-06 Score=94.99 Aligned_cols=143 Identities=16% Similarity=0.120 Sum_probs=93.9
Q ss_pred CCChhHHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCc---------cccchhhh------------------
Q 045750 438 PPKDSAKQAL-WRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH---------VSTGPDLE------------------ 489 (792)
Q Consensus 438 ~~r~~~~~~I-~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~---------~~~g~~~~------------------ 489 (792)
.+.+...+++ +++++.|+.++++|||.+.....+.+++++.... +..+....
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 3444455555 8999999999999999999999999999873210 10110000
Q ss_pred -----cc--------------------CHHH-------HHHhhh----cceE------EEEeCh--hhHHHHHHHHhhcC
Q 045750 490 -----LL--------------------SQES-------FHERVK----RATV------LARLTP--TQKLRVVQSLQSVG 525 (792)
Q Consensus 490 -----~~--------------------~~~~-------~~~~~~----~~~v------~~~~~p--~~K~~iv~~l~~~~ 525 (792)
.. ..+. +.+.+. .+.+ +....| ..|...++.+.++-
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~ 187 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKL 187 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHh
Confidence 00 0000 111111 1111 223344 35888888886652
Q ss_pred ------CCEEEEEcCCcccHHHHHhCC-eeEEecCCcHHHHhhc--------CEEe-ccCCchHHHHHHHH
Q 045750 526 ------KHVVGFLGDGINDSLALDAAN-VGISVDSGASVAKDLA--------DIIL-LEKDLNVLVAGVER 580 (792)
Q Consensus 526 ------~~~v~~iGDg~ND~~~l~~A~-vgia~~~~~~~~~~~a--------d~vl-~~~~~~~i~~~i~~ 580 (792)
...++++||+.||++||+.|+ .||+|+|+.+.+|+.+ +++. .+++-+||.++|++
T Consensus 188 ~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 188 KAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 258899999999999999999 6999999999999753 4443 35567888888865
No 68
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.45 E-value=3.4e-07 Score=84.35 Aligned_cols=111 Identities=17% Similarity=0.173 Sum_probs=77.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
.+.|++++.++.||+.|.+++++||--...+..+|.++||+..++.-+.-+-+-+-+...-.. --.-+...-|.++
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~----~~ptsdsggKa~~ 163 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDT----NEPTSDSGGKAEV 163 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCccccccc----CCccccCCccHHH
Confidence 468999999999999999999999999999999999999976443322211110000000000 0011223579999
Q ss_pred HHHHhhcC-CCEEEEEcCCcccHHHHHhCCeeEEec
Q 045750 518 VQSLQSVG-KHVVGFLGDGINDSLALDAANVGISVD 552 (792)
Q Consensus 518 v~~l~~~~-~~~v~~iGDg~ND~~~l~~A~vgia~~ 552 (792)
++.+++.- .+.++|||||.||.+|+..|+.=++.+
T Consensus 164 i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 164 IALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred HHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 99998852 267899999999999998876666654
No 69
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.40 E-value=1.6e-06 Score=87.03 Aligned_cols=43 Identities=16% Similarity=0.157 Sum_probs=39.3
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~ 478 (792)
.+...++++++|++++++|++++++|||+...+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4566778999999999999999999999999999999999983
No 70
>PLN02954 phosphoserine phosphatase
Probab=98.39 E-value=3.6e-06 Score=84.99 Aligned_cols=127 Identities=17% Similarity=0.220 Sum_probs=84.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEE------eCh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLAR------LTP 511 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~------~~p 511 (792)
++.|++.++++.|+++|+++.++||.....+..+.+.+|++...++.. .+.. ..+ ..+... ...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~-~~~~-~~~--------g~~~g~~~~~~~~~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFAN-QILF-GDS--------GEYAGFDENEPTSRS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEe-EEEE-cCC--------CcEECccCCCcccCC
Confidence 478999999999999999999999999999999999999963222210 0000 000 000000 112
Q ss_pred hhHHHHHHHHhhc-CCCEEEEEcCCcccHHHHHh--CCeeEEecCC--cHHHHhhcCEEeccCCchHHHH
Q 045750 512 TQKLRVVQSLQSV-GKHVVGFLGDGINDSLALDA--ANVGISVDSG--ASVAKDLADIILLEKDLNVLVA 576 (792)
Q Consensus 512 ~~K~~iv~~l~~~-~~~~v~~iGDg~ND~~~l~~--A~vgia~~~~--~~~~~~~ad~vl~~~~~~~i~~ 576 (792)
..|.+.++.+.+. +.+.++++||+.||+.|.++ ++++++.+.. .+.....+|+++ +++..+.+
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 3477777776654 32578899999999999888 4555555532 234455689987 45665544
No 71
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.39 E-value=1e-06 Score=86.61 Aligned_cols=92 Identities=22% Similarity=0.230 Sum_probs=71.2
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChh-h--HHHH
Q 045750 441 DSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPT-Q--KLRV 517 (792)
Q Consensus 441 ~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~-~--K~~i 517 (792)
|++.+.|+.++++|++++++||.....+..+++.+|++...++..+. ..-. ......+.++. + |.+.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~-~~~~---------~~~~~~~~~~~~~~~K~~~ 161 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL-FDNG---------GGIFTGRITGSNCGGKAEA 161 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE-ECTT---------CCEEEEEEEEEEESHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee-eecc---------cceeeeeECCCCCCcHHHH
Confidence 88889999999999999999999999999999999998654444433 1100 11234455444 3 9999
Q ss_pred HHHH------hhcCCCEEEEEcCCcccHHHHH
Q 045750 518 VQSL------QSVGKHVVGFLGDGINDSLALD 543 (792)
Q Consensus 518 v~~l------~~~~~~~v~~iGDg~ND~~~l~ 543 (792)
++.+ +... ..++++|||.||.+|||
T Consensus 162 l~~~~~~~~~~~~~-~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 162 LKELYIRDEEDIDP-DRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHTHTC-CEEEEEESSGGGHHHHH
T ss_pred HHHHHHHhhcCCCC-CeEEEEECCHHHHHHhC
Confidence 9999 2334 88999999999999986
No 72
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.36 E-value=3e-06 Score=84.71 Aligned_cols=131 Identities=9% Similarity=0.087 Sum_probs=86.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCcccc------chhhhccCHHHHHHhhhcceEE--EE
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVST------GPDLELLSQESFHERVKRATVL--AR 508 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~------g~~~~~~~~~~~~~~~~~~~v~--~~ 508 (792)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++... .+.. |..+.... .....+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~-~i~~n~~~~~~~~~~~~~--------p~~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD-RIYCNEADFSNEYIHIDW--------PHPCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc-cEEeceeEeeCCeeEEeC--------CCCCcccccc
Confidence 4789999999999999999999999999999999998875432 2211 11111000 000000 00
Q ss_pred eChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHh--hcCEEeccCCchHHHHHHH
Q 045750 509 LTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKD--LADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 509 ~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~--~ad~vl~~~~~~~i~~~i~ 579 (792)
.....|..+++.++... +.++++|||.||..|.+.||+.+|-+.-.+..++ .+.... ++|..|...++
T Consensus 140 ~cg~~K~~~l~~~~~~~-~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPN-DYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCCHHHHHHHHhhcC-CcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 01246899999988776 7789999999999999999998886522221121 122222 56777766663
No 73
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.28 E-value=4.8e-06 Score=83.61 Aligned_cols=135 Identities=10% Similarity=0.057 Sum_probs=84.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceE--EEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATV--LARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v--~~~~~p~~K~ 515 (792)
+++|++.+.++.|+++|+++.++||-....+..+.+++ +....++..... ...+.+......... +.......|.
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~--~~~~~~~~~kp~p~~~~~~~~~~~~K~ 150 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSD--FSGEYITITWPHPCDEHCQNHCGCCKP 150 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEE--ecCCeeEEeccCCccccccccCCCchH
Confidence 68999999999999999999999999999999999988 754322211100 000000000000000 0000012488
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHH--hhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAK--DLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~--~~ad~vl~~~~~~~i~~~i 578 (792)
.+++.++... ..+.++|||.||+.|.++||+.++-+.-.+.++ ..+.+.+ ++|..+...+
T Consensus 151 ~~l~~~~~~~-~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 151 SLIRKLSDTN-DFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred HHHHHhccCC-CCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 8888888776 678899999999999999999777431112211 2233333 5677666655
No 74
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.26 E-value=1e-05 Score=81.38 Aligned_cols=40 Identities=20% Similarity=0.202 Sum_probs=36.8
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~ 478 (792)
..+.++++|++++++|++++++|||+...+..+.+.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455999999999999999999999999999999999985
No 75
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.25 E-value=9.6e-06 Score=83.65 Aligned_cols=135 Identities=16% Similarity=0.208 Sum_probs=86.7
Q ss_pred CCChhHHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHhCCCC-----Cccc--cchh-hhccCHH--------------
Q 045750 438 PPKDSAKQALWRLAK-KGVKAKLLTGDSLSLAIKICHEVGIRT-----THVS--TGPD-LELLSQE-------------- 494 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~-~Gi~v~~~Tgd~~~~a~~ia~~~gi~~-----~~~~--~g~~-~~~~~~~-------------- 494 (792)
.+.++++++|++|++ .|++++++|||+...+..+.+.+++.- ..+. .+.. ...++.+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 567899999999998 899999999999999999888777510 0000 0100 0011110
Q ss_pred --------------------------HHHHhh-------hcce-----EEEEeCh--hhHHHHHHHHhhcC---CCEEEE
Q 045750 495 --------------------------SFHERV-------KRAT-----VLARLTP--TQKLRVVQSLQSVG---KHVVGF 531 (792)
Q Consensus 495 --------------------------~~~~~~-------~~~~-----v~~~~~p--~~K~~iv~~l~~~~---~~~v~~ 531 (792)
...... .... -+.+..| .+|...++.+.++- ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000000 0001 1122223 36777777665542 257899
Q ss_pred EcCCcccHHHHHhC----CeeEEecCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 532 LGDGINDSLALDAA----NVGISVDSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 532 iGDg~ND~~~l~~A----~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
+||+.||.+||+.+ +.||+||++. ..|++.+ ++...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l--~~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRL--AGVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeC--CCHHHHHHHH
Confidence 99999999999999 9999999875 3477777 4666666665
No 76
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.22 E-value=5.8e-06 Score=81.97 Aligned_cols=110 Identities=15% Similarity=0.089 Sum_probs=76.7
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEE-EEeChhhH
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVL-ARLTPTQK 514 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~-~~~~p~~K 514 (792)
..+++|++.+.++.++++|++++++||.....+..+++++|++.- +.. ++....+..+ ...+. -.+..+.|
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~--~~~-~l~~~~~g~~-----~g~~~~~~~~g~~K 156 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA--IGT-RLEESEDGIY-----TGNIDGNNCKGEGK 156 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce--Eec-ceEEcCCCEE-----eCCccCCCCCChHH
Confidence 456899999999999999999999999999999999999999631 111 0100000000 00000 01335677
Q ss_pred HHHHHHHhhc-C--CCEEEEEcCCcccHHHHHhCCeeEEecC
Q 045750 515 LRVVQSLQSV-G--KHVVGFLGDGINDSLALDAANVGISVDS 553 (792)
Q Consensus 515 ~~iv~~l~~~-~--~~~v~~iGDg~ND~~~l~~A~vgia~~~ 553 (792)
.+.++.+.+. + .+.+.++||+.+|.+|++.|+.++++..
T Consensus 157 ~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 157 VHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred HHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 7777665543 2 1368899999999999999999999863
No 77
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.19 E-value=9.7e-06 Score=81.95 Aligned_cols=126 Identities=21% Similarity=0.242 Sum_probs=88.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
.++.|++.++++.+++.|++++++||........+.+++|+... .++++..... .+-.|+--
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~ 155 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPN----------------KKPDPAPL 155 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCC----------------CCcChHHH
Confidence 45789999999999999999999999999999999999998531 1111111000 01122323
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecC----CcHHHHhhcCEEeccCCchHHHHHHHHh
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDS----GASVAKDLADIILLEKDLNVLVAGVERG 581 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~----~~~~~~~~ad~vl~~~~~~~i~~~i~~g 581 (792)
..+++.++... +.++++||+.||+.+.++||+ +|++.. ..+.....+++++ +++..+...+.++
T Consensus 156 ~~~~~~~~~~~-~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 156 LLACEKLGLDP-EEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred HHHHHHcCCCh-hheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 44555555445 678899999999999999999 666642 2334455688887 7788887777553
No 78
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.17 E-value=4.2e-06 Score=81.00 Aligned_cols=100 Identities=18% Similarity=0.230 Sum_probs=69.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEE--EEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVL--ARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~--~~~~p~~K~ 515 (792)
+++|++.+.++.+++.|++++++||.....+..+++++|+.. ++.. .+....+..+ .. ... ....+..|.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~--~~~~-~~~~~~~g~~---~g--~~~~~~~~~~~~K~ 144 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD--VFAN-RLEFDDNGLL---TG--PIEGQVNPEGECKG 144 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch--heee-eEEECCCCEE---eC--ccCCcccCCcchHH
Confidence 368999999999999999999999999999999999999863 1111 0000000000 00 000 123457888
Q ss_pred HHHHHHhhcC---CCEEEEEcCCcccHHHHHhC
Q 045750 516 RVVQSLQSVG---KHVVGFLGDGINDSLALDAA 545 (792)
Q Consensus 516 ~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A 545 (792)
+.++.+++.. .+.+.++|||.||.+|++.|
T Consensus 145 ~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 145 KVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 8888876541 25688999999999999875
No 79
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.16 E-value=1.7e-05 Score=80.15 Aligned_cols=43 Identities=16% Similarity=0.217 Sum_probs=39.5
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~ 478 (792)
++...+.++++|++|+++||.++++||+.......+.+++|+.
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 3456788999999999999999999999999999999999994
No 80
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.15 E-value=5.6e-06 Score=75.98 Aligned_cols=116 Identities=22% Similarity=0.179 Sum_probs=75.7
Q ss_pred ccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC--CCccccchhhhccCHHHHHHhhhcceEEEEeCh
Q 045750 434 TFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR--TTHVSTGPDLELLSQESFHERVKRATVLARLTP 511 (792)
Q Consensus 434 ~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~--~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 511 (792)
.-..++.+++.+.+++|+++|++++++||+....+....+++|+. ...++......................+.+-.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence 345689999999999999999999999999999999999999983 122222111110000000000111122234445
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCC-eeEE
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAAN-VGIS 550 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~-vgia 550 (792)
+.+..+.+.+.... +.++++||+.+|+.|.+.++ -+|+
T Consensus 100 ~~~~~~~~~~~~~~-~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 100 DKLLAALKLLGVDP-EEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHHHHHcCCCh-hhEEEeCCCHHHHHHHHHcCCceee
Confidence 55666666665554 77899999999999999844 3544
No 81
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.14 E-value=2e-05 Score=79.10 Aligned_cols=124 Identities=23% Similarity=0.257 Sum_probs=88.9
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCc--cccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTH--VSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~--~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
...+-|+++++++.|+++|++..++|+++...+..+.+++|+.... ++.+..... .+=.|..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~----------------~KP~P~~ 150 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPP----------------PKPDPEP 150 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCC----------------CCcCHHH
Confidence 4467899999999999999999999999999999999999996421 111111100 1113444
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCC---eeEEecC--CcHHHHhhcCEEeccCCchHHHHHH
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAAN---VGISVDS--GASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~---vgia~~~--~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
....++.+.... +.++||||+.+|+.|-++|+ +|+..|. ........+|+++ +++..+...+
T Consensus 151 l~~~~~~~~~~~-~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 151 LLLLLEKLGLDP-EEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHhCCCh-hheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 555555555543 57999999999999999999 5666663 3455556699998 5677666554
No 82
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.14 E-value=1.2e-05 Score=79.85 Aligned_cols=122 Identities=18% Similarity=0.204 Sum_probs=83.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+++++|+++|+++.++|+.....+....+++|+.. +.++...+.. ..+-.|+--.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 138 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVP----------------RPKPAPDIVR 138 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCC----------------CCCCChHHHH
Confidence 678999999999999999999999999999999999999853 1111111000 0111222233
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEE-e--c--CCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGIS-V--D--SGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia-~--~--~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.+++.++-.. +.+++|||+.+|+.+-++||+... + | +..+..+..+|+++ +++..+..++
T Consensus 139 ~~~~~~~~~~-~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 139 EALRLLDVPP-EDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHcCCCh-hheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 4444444334 679999999999999999999543 3 3 22334566789987 5666665544
No 83
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.12 E-value=9.8e-06 Score=79.27 Aligned_cols=112 Identities=12% Similarity=0.133 Sum_probs=76.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEE-eChhh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLAR-LTPTQ 513 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~-~~p~~ 513 (792)
-+++|++.+.++.|++.|++++++|+.+......+.++.|+... .+++++...+ .+..+.-...+...+.. .....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFD-NDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceEC-CCCcEEEecCCCCccCcCCCCCC
Confidence 47899999999999999999999999999999999999998532 2332221111 00000000000001111 11235
Q ss_pred HHHHHHHHhhc-CCCEEEEEcCCcccHHHHHhCCeeEE
Q 045750 514 KLRVVQSLQSV-GKHVVGFLGDGINDSLALDAANVGIS 550 (792)
Q Consensus 514 K~~iv~~l~~~-~~~~v~~iGDg~ND~~~l~~A~vgia 550 (792)
|.++++.+++. . +.++++|||.||+.|.++||+-.|
T Consensus 150 K~~~~~~~~~~~~-~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 150 KGKVIHKLSEPKY-QHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHHhhcC-ceEEEECCCcchhchHhcCCcccc
Confidence 89999998887 6 789999999999999999987654
No 84
>PTZ00174 phosphomannomutase; Provisional
Probab=98.08 E-value=1.7e-05 Score=81.16 Aligned_cols=53 Identities=25% Similarity=0.314 Sum_probs=43.9
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcC----CcccHHHHHhC-CeeEEecCCcHHHHhhcCEE
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGD----GINDSLALDAA-NVGISVDSGASVAKDLADII 565 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGD----g~ND~~~l~~A-~vgia~~~~~~~~~~~ad~v 565 (792)
.+|..-++.+.++. +.|+++|| |.||++||+.| -.|+++.|+.+.+|..+.++
T Consensus 187 vsKg~al~~L~~~~-~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLENDF-KEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhhh-hhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHh
Confidence 46788888887775 78999999 99999999976 56788889999998877654
No 85
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.07 E-value=3.3e-05 Score=86.97 Aligned_cols=39 Identities=21% Similarity=0.190 Sum_probs=36.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI 477 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi 477 (792)
.-+.++++|++++++|++++++|||+...+..+++++|+
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 556789999999999999999999999999999999997
No 86
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.93 E-value=4.5e-05 Score=76.35 Aligned_cols=122 Identities=23% Similarity=0.223 Sum_probs=82.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+.. ..++.+++... .+-.|+--.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~----------------~Kp~p~~~~ 145 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEH----------------AKPDPEPVL 145 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCC----------------CCCCcHHHH
Confidence 367999999999999999999999999999999999999854 11111111100 111233334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE-Ee--cC-CcH-HHHhhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI-SV--DS-GAS-VAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi-a~--~~-~~~-~~~~~ad~vl~~~~~~~i~~~i 578 (792)
++++.++... ..+++|||+.+|+.+-++||+-. ++ +. ..+ .....+|+++ +++..+.+.+
T Consensus 146 ~~~~~~~~~~-~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 146 KALELLGAKP-EEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHcCCCH-HHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 4444444334 67889999999999999999943 33 32 222 2344588877 5677766654
No 87
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.91 E-value=6.2e-05 Score=78.08 Aligned_cols=124 Identities=23% Similarity=0.324 Sum_probs=82.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
.++.|++.++++.|+++|++++++|+.+...+..+.+++|+.. +.++++.+... .+-.|+--
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~----------------~Kp~p~~~ 163 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQ----------------KKPDPAAL 163 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCC----------------CCCCcHHH
Confidence 4678999999999999999999999999999998988888843 11111110000 00111112
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecC----CcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDS----GASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~----~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
..+.+.+.-.. +.+++|||+.||+.+.++||+ .+++.. ..+.....+|+++ +++..+.+++.
T Consensus 164 ~~~~~~~g~~~-~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 164 LFVMKMAGVPP-SQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred HHHHHHhCCCh-hHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 23333333333 678899999999999999998 444432 2223445788887 56777765543
No 88
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.87 E-value=8.9e-05 Score=73.58 Aligned_cols=40 Identities=30% Similarity=0.365 Sum_probs=37.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI 477 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi 477 (792)
++.+.+.++|++|++.|++++++|||....+..+.+.++.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~ 56 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPL 56 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCC
Confidence 5889999999999999999999999999999999988654
No 89
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.86 E-value=6.5e-05 Score=75.10 Aligned_cols=120 Identities=20% Similarity=0.211 Sum_probs=79.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+++|+++.++|+.+...+..+.+++|+... .++.+.+... .+-.|+--.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~Kp~p~~~~ 148 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQ----------------RKPHPDPLL 148 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCC----------------CCCChHHHH
Confidence 5789999999999999999999999999999999999998531 1111111000 011122223
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEE-e--cCC--cHHHHhhcCEEeccCCchHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGIS-V--DSG--ASVAKDLADIILLEKDLNVLVA 576 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia-~--~~~--~~~~~~~ad~vl~~~~~~~i~~ 576 (792)
...+.+.... +.++++||+.+|+.+.++||+... + |.. .+.....+|+++ +++..+..
T Consensus 149 ~~~~~~~~~~-~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 149 LAAERLGVAP-QQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred HHHHHcCCCh-hHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 3444444334 668899999999999999998544 4 311 223334688877 45555543
No 90
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.75 E-value=0.00039 Score=82.59 Aligned_cols=136 Identities=20% Similarity=0.257 Sum_probs=86.4
Q ss_pred CCChhHHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHhCCC----CCcc--ccchhhhcc-------------------
Q 045750 438 PPKDSAKQALWRLAK-KGVKAKLLTGDSLSLAIKICHEVGIR----TTHV--STGPDLELL------------------- 491 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~-~Gi~v~~~Tgd~~~~a~~ia~~~gi~----~~~~--~~g~~~~~~------------------- 491 (792)
.+.+++.+++++|.+ .|+.|+++|||...........+++. ++.. ..+..+...
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 467899999999999 69999999999999998887766651 0000 001110000
Q ss_pred ----------------------CH-------HHHHHhh----hc--ceEE-----EEeCh--hhHHHHHHHHhhcC-CCE
Q 045750 492 ----------------------SQ-------ESFHERV----KR--ATVL-----ARLTP--TQKLRVVQSLQSVG-KHV 528 (792)
Q Consensus 492 ----------------------~~-------~~~~~~~----~~--~~v~-----~~~~p--~~K~~iv~~l~~~~-~~~ 528 (792)
+. +++.+.+ .. ..+. .+..| .+|...++.+.+.. ...
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 00 0011111 00 1111 12223 47888888877642 268
Q ss_pred EEEEcCCcccHHHHHhC---CeeEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 529 VGFLGDGINDSLALDAA---NVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 529 v~~iGDg~ND~~~l~~A---~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
++++||+.||.+||+.+ +.+|+||++ +.+|++++.+ .+.+...++
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~--~~eV~~~L~ 721 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPS--QREVRELLR 721 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCC--HHHHHHHHH
Confidence 99999999999999986 688999874 5678888854 355665553
No 91
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.73 E-value=0.00018 Score=73.27 Aligned_cols=69 Identities=17% Similarity=0.153 Sum_probs=47.8
Q ss_pred hhHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhCCeeEEecCCcHH-----HHhhc---C-EEeccCCchHHHHHHH
Q 045750 512 TQKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAANVGISVDSGASV-----AKDLA---D-IILLEKDLNVLVAGVE 579 (792)
Q Consensus 512 ~~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~-----~~~~a---d-~vl~~~~~~~i~~~i~ 579 (792)
..|...++.++++- .+.|+++||+.||.+||..++-||.++|+.++ ..... . ++...+.-.||.++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 57888888888762 14678899999999999999999999999888 32222 2 4444556677777776
Q ss_pred H
Q 045750 580 R 580 (792)
Q Consensus 580 ~ 580 (792)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 5
No 92
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.69 E-value=0.00013 Score=73.36 Aligned_cols=119 Identities=21% Similarity=0.216 Sum_probs=77.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
-++.|++.++++.|+++|+++.++|+........+.+++|+... .++.+.... ..+-.|+--
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~~~~~ 154 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLP----------------YSKPHPEVY 154 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCC----------------CCCCCHHHH
Confidence 46789999999999999999999999999999999999998531 111111100 001112222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe-cC---CcHHHHhhcCEEeccCCchHH
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV-DS---GASVAKDLADIILLEKDLNVL 574 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~-~~---~~~~~~~~ad~vl~~~~~~~i 574 (792)
..+.+.+.-.. +.++++||+.||+.+-++||+.... .. ..+.....+|.++ .++..+
T Consensus 155 ~~~~~~~~~~~-~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl 215 (222)
T PRK10826 155 LNCAAKLGVDP-LTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTEL 215 (222)
T ss_pred HHHHHHcCCCH-HHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHH
Confidence 22333332223 6688999999999999999986543 22 2222234577776 445554
No 93
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.68 E-value=0.00019 Score=71.20 Aligned_cols=106 Identities=12% Similarity=0.057 Sum_probs=74.4
Q ss_pred CCChhHHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALW-RLAKKGVKAKLLTGDSLSLAIKICHEVGIRT-THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~-~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
.++|++.+.|+ .++++|++++++|+-....+..+++..|+.. ..++ |.+++..+.. . ..=..|..++|.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i-~t~le~~~gg-------~-~~g~~c~g~~Kv 164 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLI-ASQIERGNGG-------W-VLPLRCLGHEKV 164 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEE-EEEeEEeCCc-------e-EcCccCCChHHH
Confidence 46899999996 7888999999999999999999999966522 2222 3333211100 0 011235667888
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD 552 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~ 552 (792)
.-++..-........+-||+.||.|||+.||.+++++
T Consensus 165 ~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 165 AQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 7666443222145668999999999999999999995
No 94
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.68 E-value=0.00024 Score=73.08 Aligned_cols=95 Identities=18% Similarity=0.133 Sum_probs=66.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC---ccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT---HVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~---~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
++.|++.+.++.|+++|+++.++|+.....+..+.+++|+... .++++.+... .+=.|+--
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~----------------~KP~p~~~ 162 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPA----------------GRPAPWMA 162 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCC----------------CCCCHHHH
Confidence 4678999999999999999999999999999999999988532 2222221110 01123332
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG 548 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg 548 (792)
....+.+.-...+.+++|||+.+|+.+-+.||+.
T Consensus 163 ~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 163 LKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 3344444322125689999999999999999983
No 95
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.67 E-value=0.00042 Score=71.64 Aligned_cols=119 Identities=16% Similarity=0.131 Sum_probs=80.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++-|++.++++.|++.|+++.++|+.....+..+.+.+|+... .++++.+. ...|+--.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~-------------------~~k~~~~~ 202 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI-------------------LSKRRALS 202 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC-------------------CCCHHHHH
Confidence 5679999999999999999999999999999999999998532 11111100 00111112
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE-EecC--CcH--HHHhhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI-SVDS--GAS--VAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi-a~~~--~~~--~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.+++.+.-.. +.+++|||+.+|+.+-++||+-. ++.. .+. .....+|+++ +++..+...+
T Consensus 203 ~~l~~~~~~p-~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 203 QLVAREGWQP-AAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHhCcCh-hHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 2222232233 67899999999999999999953 3322 222 2344689987 6677776655
No 96
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.66 E-value=0.00023 Score=71.60 Aligned_cols=122 Identities=25% Similarity=0.235 Sum_probs=79.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC--C--CccccchhhhccCHHHHHHhhhcceEEEEeChh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR--T--THVSTGPDLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~--~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
.++.||+.+.++.|+++|+++.++|+.....+..+.+++|+. . ..++++.+... .+-.|+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~----------------~KP~p~ 149 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAA----------------GRPAPD 149 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCC----------------CCCCHH
Confidence 478999999999999999999999999999999999999986 2 22222222110 011122
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE--EecCC---cHHH-HhhcCEEeccCCchHHHH
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI--SVDSG---ASVA-KDLADIILLEKDLNVLVA 576 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi--a~~~~---~~~~-~~~ad~vl~~~~~~~i~~ 576 (792)
--....+.+.-...+.++++||+.+|+.+-++||+.. ++..+ .+.. ...+|.++ +++..+..
T Consensus 150 ~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 150 LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 2223333333221257899999999999999999986 34322 1222 23467766 45555543
No 97
>PRK11590 hypothetical protein; Provisional
Probab=97.65 E-value=0.00044 Score=68.87 Aligned_cols=105 Identities=13% Similarity=0.066 Sum_probs=74.8
Q ss_pred CCChhHHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-CccccchhhhccCHHHHHHhhhcceEE-EEeChhhH
Q 045750 438 PPKDSAKQAL-WRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT-THVSTGPDLELLSQESFHERVKRATVL-ARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I-~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~-~~~~p~~K 514 (792)
.+.|++.+.| +.+++.|++++++|+....-+..+++.+|+.. ..++ +.+++.. ....+. ..|..++|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i-~t~l~~~---------~tg~~~g~~c~g~~K 164 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI-ASQMQRR---------YGGWVLTLRCLGHEK 164 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE-EEEEEEE---------EccEECCccCCChHH
Confidence 4489999999 57888999999999999999999999999521 1222 3222210 000011 23556788
Q ss_pred HHHHHHH-hhcCCCEEEEEcCCcccHHHHHhCCeeEEecC
Q 045750 515 LRVVQSL-QSVGKHVVGFLGDGINDSLALDAANVGISVDS 553 (792)
Q Consensus 515 ~~iv~~l-~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~ 553 (792)
..-++.. .... ....+-||+.||.|||+.|+.+++++.
T Consensus 165 ~~~l~~~~~~~~-~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 165 VAQLERKIGTPL-RLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred HHHHHHHhCCCc-ceEEEecCCcccHHHHHhCCCCEEECc
Confidence 8766654 3233 456689999999999999999999953
No 98
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.63 E-value=0.00029 Score=71.23 Aligned_cols=122 Identities=20% Similarity=0.158 Sum_probs=82.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|++.|+++.++|+.+...+..+.+++|+... .++.+.+.. ..+-.|+--.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~p~~~~ 158 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLA----------------ERKPHPLPLL 158 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCC----------------CCCCCHHHHH
Confidence 5789999999999999999999999999988888898988531 111111100 0111233334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE-Ee--cC--Cc-HHHHhhcCEEeccCCchHHHHHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI-SV--DS--GA-SVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi-a~--~~--~~-~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.+++.+.-.. +.+++|||+.+|+.+-++||+.. ++ |. .. ......+|+++ +++..+.+.+
T Consensus 159 ~~~~~l~~~p-~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 159 VAAERIGVAP-TDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHhCCCh-hhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 5555555545 77999999999999999999853 34 21 11 22234588888 5566655443
No 99
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.59 E-value=0.00079 Score=68.56 Aligned_cols=137 Identities=12% Similarity=0.144 Sum_probs=82.9
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
.-+++|++.+.++.|++.|+++.++||-....+..+.+++|+... .++++. +..-.+..... ...-.+ ....
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~-L~f~~dGvltG-~~~P~i----~~~~ 192 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNF-MDFDEDGVLKG-FKGPLI----HTFN 192 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeee-EEECCCCeEeC-CCCCcc----cccc
Confidence 357899999999999999999999999999999999999998421 121110 00000000000 000001 1134
Q ss_pred HHHHHH-----HHhh-cCCCEEEEEcCCcccHHHHHhC---CeeEEec--CCc-----HHHHhhcCEEeccCCchHHHHH
Q 045750 514 KLRVVQ-----SLQS-VGKHVVGFLGDGINDSLALDAA---NVGISVD--SGA-----SVAKDLADIILLEKDLNVLVAG 577 (792)
Q Consensus 514 K~~iv~-----~l~~-~~~~~v~~iGDg~ND~~~l~~A---~vgia~~--~~~-----~~~~~~ad~vl~~~~~~~i~~~ 577 (792)
|.+.+. .+.+ .....|+++|||.||+.|..-. .--+.+| |.. +.-+++=|+|+.+|.--.++..
T Consensus 193 K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~ 272 (277)
T TIGR01544 193 KNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANS 272 (277)
T ss_pred cHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHH
Confidence 554333 2221 2226788999999999996433 2234444 332 3455678999998876556555
Q ss_pred H
Q 045750 578 V 578 (792)
Q Consensus 578 i 578 (792)
|
T Consensus 273 i 273 (277)
T TIGR01544 273 I 273 (277)
T ss_pred H
Confidence 5
No 100
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.54 E-value=0.00054 Score=70.37 Aligned_cols=118 Identities=12% Similarity=0.139 Sum_probs=79.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+.. ..++++.+... .+-.|+--.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~----------------~KP~Pe~~~ 172 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYR----------------GKPDPEMFM 172 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCC----------------CCCCHHHHH
Confidence 568999999999999999999999999999999999999853 22333322210 111233333
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE-Eec-CCcHHHHhhcCEEeccCCchHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI-SVD-SGASVAKDLADIILLEKDLNVL 574 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi-a~~-~~~~~~~~~ad~vl~~~~~~~i 574 (792)
..++.+.-.. ..+++|||+.+|+.+-++||+.. ++. .........+|+++ +++..+
T Consensus 173 ~a~~~l~~~p-~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 173 YAAERLGFIP-ERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHhCCCh-HHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 4445454444 67889999999999999999843 443 22222233477776 444443
No 101
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.52 E-value=0.00036 Score=69.85 Aligned_cols=91 Identities=23% Similarity=0.311 Sum_probs=65.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeC--
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDS----LSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLT-- 510 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~----~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~-- 510 (792)
-.+.|++++.++.++++|+++.++|||. ..++..+.+.+|+...... ..+++..+
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f-------------------~vil~gd~~~ 173 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMN-------------------PVIFAGDKPG 173 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccce-------------------eEEEcCCCCC
Confidence 3467889999999999999999999975 5688889999999421100 01222221
Q ss_pred hhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEe
Q 045750 511 PTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISV 551 (792)
Q Consensus 511 p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~ 551 (792)
..+|.. .+++.+ .++++||..+|+.+-+.||+ +|++
T Consensus 174 K~~K~~---~l~~~~--i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 174 QYTKTQ---WLKKKN--IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred CCCHHH---HHHhcC--CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 134444 444554 57899999999999999998 5555
No 102
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.50 E-value=0.00055 Score=70.07 Aligned_cols=114 Identities=16% Similarity=0.187 Sum_probs=78.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+++|+++.++|+.....+....+++|+.. +.++.+.+... .+-.|+--.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~----------------~KP~p~~~~ 171 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEH----------------AKPHPDPYL 171 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCC----------------CCCChHHHH
Confidence 567899999999999999999999999999999999999853 22233322211 111233334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE-Eec--CCcH-HHHhhcCEEecc
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI-SVD--SGAS-VAKDLADIILLE 568 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi-a~~--~~~~-~~~~~ad~vl~~ 568 (792)
...+.+.... +.+++|||+.+|+.+-++|++-. ++. ...+ .....+|+++.+
T Consensus 172 ~a~~~~~~~~-~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 172 KALEVLKVSK-DHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHhCCCh-hHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 4455554444 67899999999999999999843 343 2222 223468888743
No 103
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.49 E-value=0.00071 Score=64.26 Aligned_cols=141 Identities=20% Similarity=0.298 Sum_probs=92.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccch-hhhcc--CHHHHHHhhh-------------
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGP-DLELL--SQESFHERVK------------- 501 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~-~~~~~--~~~~~~~~~~------------- 501 (792)
.+-|++.++++.+.+. ...+++|-.-.+-+.++|+.+|++...+..-+ ++++. ++++-.+.+.
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 5679999999999887 45566666677788999999999543221111 11110 1111111110
Q ss_pred ---cceEEEEeChhhHHHHHHHHhhcCC-----------------CEEEEEcCCcccHHHHHhCCe--eEEec-CCcHHH
Q 045750 502 ---RATVLARLTPTQKLRVVQSLQSVGK-----------------HVVGFLGDGINDSLALDAANV--GISVD-SGASVA 558 (792)
Q Consensus 502 ---~~~v~~~~~p~~K~~iv~~l~~~~~-----------------~~v~~iGDg~ND~~~l~~A~v--gia~~-~~~~~~ 558 (792)
-..+|.|..|.+-.++++..+.-|+ ...+++||+..|+.||+.+.= |+|+. ||.+-+
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 0126777777665555555554332 346789999999999998843 47776 888888
Q ss_pred HhhcCEEeccCCchHHHHHHH
Q 045750 559 KDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 559 ~~~ad~vl~~~~~~~i~~~i~ 579 (792)
...||+-+.+++..++...|+
T Consensus 242 l~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccceEEeccchhhhhHHHH
Confidence 899999988888888777763
No 104
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.44 E-value=0.00073 Score=63.48 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=68.5
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHH-----hCCCCCccc-cc-hhhhccCHHHHHHhhhcceE
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAI---KICHE-----VGIRTTHVS-TG-PDLELLSQESFHERVKRATV 505 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~---~ia~~-----~gi~~~~~~-~g-~~~~~~~~~~~~~~~~~~~v 505 (792)
+|...|++++++++++++|++++++|||+...+. ....+ .+++...++ .+ ........+ +
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e----------~ 94 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHRE----------V 94 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcc----------c
Confidence 4788999999999999999999999999999884 55555 234322222 11 111111111 2
Q ss_pred EEEeChhhHHHHHHHHhhc----CCCEEEEEcCCcccHHHHHhCCee
Q 045750 506 LARLTPTQKLRVVQSLQSV----GKHVVGFLGDGINDSLALDAANVG 548 (792)
Q Consensus 506 ~~~~~p~~K~~iv~~l~~~----~~~~v~~iGDg~ND~~~l~~A~vg 548 (792)
..+..-+.|.+.++.+++. +...++.+||+.+|+.+.+++++.
T Consensus 95 i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 95 ISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 2222223477777777762 336778899999999999888774
No 105
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.41 E-value=0.00092 Score=69.36 Aligned_cols=94 Identities=17% Similarity=0.109 Sum_probs=63.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC---CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT---THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~---~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
++-|++.++++.|+++|+++.++||.....+..+.+.+|+.. +.++++.+... .+-.|+--
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~----------------~KP~p~~~ 164 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPA----------------GRPYPWMA 164 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCC----------------CCCChHHH
Confidence 567999999999999999999999999999888888777642 11111111100 01112222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV 547 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v 547 (792)
....+.+.-...+.+++|||+.+|+.+-+.||+
T Consensus 165 ~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 165 LKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 333333332211568999999999999999998
No 106
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.33 E-value=0.00052 Score=68.79 Aligned_cols=90 Identities=22% Similarity=0.244 Sum_probs=63.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeCh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGD----SLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTP 511 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd----~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 511 (792)
.+.+++++.++.++++|+++.++|++ ...++..+.+.+|++.. .++.++.... ..|
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~------------------~Kp 175 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQ------------------YQY 175 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCC------------------CCC
Confidence 34555999999999999999999999 77899999999999641 1111111100 012
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEe
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISV 551 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~ 551 (792)
+|. ..+++.+ .++++||+.||+.+-+.|++ +|++
T Consensus 176 -~~~---~~l~~~~--i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 176 -TKT---QWIQDKN--IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred -CHH---HHHHhCC--CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 232 3445554 47899999999999999998 3444
No 107
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.32 E-value=0.00094 Score=74.99 Aligned_cols=122 Identities=13% Similarity=0.083 Sum_probs=84.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.++++++.. ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~-----------------~~~kP~--- 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN-----------------SLNKSD--- 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-----------------CCCCcH---
Confidence 678999999999999999999999999999999999999853 2222222110 011232
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEec--CCcHHHHhhcCEEeccCCchHHHHHHHHh
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVD--SGASVAKDLADIILLEKDLNVLVAGVERG 581 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~--~~~~~~~~~ad~vl~~~~~~~i~~~i~~g 581 (792)
.+...+++.+.+.++++||+.+|+.+-+.||+ .|++. ...+.....+|+++ +++..+.+.+...
T Consensus 390 ~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~ 456 (459)
T PRK06698 390 LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTV 456 (459)
T ss_pred HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHH
Confidence 22223333333679999999999999999998 44443 22222234578887 5677777766544
No 108
>PRK11587 putative phosphatase; Provisional
Probab=97.32 E-value=0.0011 Score=66.45 Aligned_cols=112 Identities=21% Similarity=0.168 Sum_probs=73.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT-THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLR 516 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 516 (792)
++.|++.++++.|+++|+++.++|+.....+...-+..|+.. ..++++.+... .+-.|+--..
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~~~i~~~~~~~~----------------~KP~p~~~~~ 146 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAPEVFVTAERVKR----------------GKPEPDAYLL 146 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCccEEEEHHHhcC----------------CCCCcHHHHH
Confidence 578999999999999999999999998877777767777742 12222211100 1112333334
Q ss_pred HHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecCCc-HHHHhhcCEEe
Q 045750 517 VVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSGA-SVAKDLADIIL 566 (792)
Q Consensus 517 iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~~~-~~~~~~ad~vl 566 (792)
..+.+.-.. +.+++|||+.+|+.+-++||+ .|++..+. ......+|+++
T Consensus 147 ~~~~~g~~p-~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~ 197 (218)
T PRK11587 147 GAQLLGLAP-QECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVL 197 (218)
T ss_pred HHHHcCCCc-ccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEe
Confidence 444444444 778999999999999999998 46665332 22234577766
No 109
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.29 E-value=0.0015 Score=69.91 Aligned_cols=118 Identities=15% Similarity=0.185 Sum_probs=79.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.||+.++++.|+++|+++.++|+.....+..+-+.+|+.. +.++.+++... ..-.|+--.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~----------------~KP~Peifl 279 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYR----------------GKPDPEMFI 279 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCC----------------CCCCHHHHH
Confidence 467999999999999999999999999999999999999853 12222221110 011233334
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecCCcHH-HHhhcCEEeccCCchHH
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDSGASV-AKDLADIILLEKDLNVL 574 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~~~~~-~~~~ad~vl~~~~~~~i 574 (792)
..++.+.-.. +.++++||+.+|+.+-+.|++- |++..+.+. ....+|+++ +++..+
T Consensus 280 ~A~~~lgl~P-eecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 280 YAAQLLNFIP-ERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHcCCCc-ccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 4455554445 7799999999999999999994 334432222 123478776 445443
No 110
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.21 E-value=0.0012 Score=66.33 Aligned_cols=98 Identities=13% Similarity=0.180 Sum_probs=67.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+++|++++++|+.+...+....+++|+.. +.++.+.+... .+-.|+--.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~----------------~KP~~~~~~ 157 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGV----------------EKPHPKIFY 157 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCC----------------CCCCHHHHH
Confidence 578999999999999999999999999888888889998853 11111111100 011122223
Q ss_pred HHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCe-eEEec
Q 045750 516 RVVQSLQSVGKHVVGFLGDGI-NDSLALDAANV-GISVD 552 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~v-gia~~ 552 (792)
.+.+.+.-.. +.+++|||+. +|+.+-++||+ .|.+.
T Consensus 158 ~~~~~~~~~~-~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 158 AALKRLGVKP-EEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHcCCCh-hhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 3333333333 6789999997 99999999998 55554
No 111
>PRK06769 hypothetical protein; Validated
Probab=97.20 E-value=0.0013 Score=63.20 Aligned_cols=98 Identities=16% Similarity=0.088 Sum_probs=60.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHhCCCCCccc---cchhhhccCHHHHHHhhhcceEE
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLS--------LAIKICHEVGIRTTHVS---TGPDLELLSQESFHERVKRATVL 506 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~--------~a~~ia~~~gi~~~~~~---~g~~~~~~~~~~~~~~~~~~~v~ 506 (792)
++-|++++++++|++.|+++.++|+.... ......+..|+..-... .+++.. .
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~----------------~ 91 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCE----------------C 91 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCC----------------C
Confidence 36899999999999999999999987642 22333445666431000 000000 0
Q ss_pred EEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEec
Q 045750 507 ARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVD 552 (792)
Q Consensus 507 ~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~ 552 (792)
.+-.|+--.++++.+.... +.+++|||+.+|+.+-++|++- |++.
T Consensus 92 ~KP~p~~~~~~~~~l~~~p-~~~i~IGD~~~Di~aA~~aGi~~i~v~ 137 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGLDL-TQCAVIGDRWTDIVAAAKVNATTILVR 137 (173)
T ss_pred CCCCHHHHHHHHHHcCCCH-HHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 1112222344444444333 6789999999999999999994 4443
No 112
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.17 E-value=0.001 Score=66.85 Aligned_cols=99 Identities=12% Similarity=0.011 Sum_probs=67.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeCh--h
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTP--T 512 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p--~ 512 (792)
-++.|++.+.++.|+++|+++.++|+.+...+....+.+|+.. +.++.+.+. ....| +
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~------------------~~~KP~p~ 153 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTF------------------GYPKEDQR 153 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeC------------------CCCCCCHH
Confidence 3678999999999999999999999999888888888888742 111111111 00112 1
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee--EEecCC
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG--ISVDSG 554 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg--ia~~~~ 554 (792)
-=....+.+.-.. +.+++|||+.+|+.+-++||+. +++.++
T Consensus 154 ~~~~~~~~~~~~p-~~~l~igDs~~di~aA~~aG~~~~~~v~~~ 196 (224)
T PRK14988 154 LWQAVAEHTGLKA-ERTLFIDDSEPILDAAAQFGIRYCLGVTNP 196 (224)
T ss_pred HHHHHHHHcCCCh-HHEEEEcCCHHHHHHHHHcCCeEEEEEeCC
Confidence 1122233333333 6789999999999999999996 445443
No 113
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.14 E-value=0.00075 Score=66.48 Aligned_cols=92 Identities=17% Similarity=0.138 Sum_probs=65.1
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
.+++.+++.++++.|+++|+++.++||.....+..+.+.+|+... .++.+.+ +..+-.|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~-----------------~~~KP~p~~ 166 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMED-----------------CPPKPNPEP 166 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecC-----------------CCCCcCHHH
Confidence 345677789999999999999999999999999999999998531 1111111 011222443
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhC
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAA 545 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A 545 (792)
-..+++.+.-.. +.+++|||+.+|+.+-++|
T Consensus 167 ~~~~~~~~~~~~-~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 167 LILAAKALGVEA-CHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHhCcCc-ccEEEEeCCHHHHHHHHhC
Confidence 345555555445 6789999999999887654
No 114
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.09 E-value=0.0031 Score=57.52 Aligned_cols=93 Identities=18% Similarity=0.210 Sum_probs=65.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEE
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDS--------LSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLAR 508 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~--------~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 508 (792)
.++.|++.++++.|+++|++++++|+.. ......+.+++|+.......... ..+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~------------------~~K 85 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACPH------------------CRK 85 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECCC------------------CCC
Confidence 4678999999999999999999999999 77888889999885321110000 001
Q ss_pred eChhhHHHHHHHHh-hcCCCEEEEEcC-CcccHHHHHhCCee
Q 045750 509 LTPTQKLRVVQSLQ-SVGKHVVGFLGD-GINDSLALDAANVG 548 (792)
Q Consensus 509 ~~p~~K~~iv~~l~-~~~~~~v~~iGD-g~ND~~~l~~A~vg 548 (792)
-.|+--..+.+.++ -.. +.+++||| ..+|+.+-+++|+-
T Consensus 86 P~~~~~~~~~~~~~~~~~-~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 86 PKPGMFLEALKRFNEIDP-EESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CChHHHHHHHHHcCCCCh-hheEEEcCCCcccHHHHHHCCCe
Confidence 11222234445442 333 67899999 69999999999884
No 115
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.99 E-value=0.0024 Score=62.90 Aligned_cols=95 Identities=15% Similarity=0.192 Sum_probs=66.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+++++|+++|+++.++|+-+........+++|+.. +.++++.+... .+-.|+-=.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~----------------~KP~~~~~~ 155 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRA----------------YKPAPQVYQ 155 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCC----------------CCCCHHHHH
Confidence 468999999999999999999999999999999999999842 12222211100 011122223
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI 549 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi 549 (792)
.+.+.+.-.. +.+++|||+.+|+.+-++||+-.
T Consensus 156 ~~~~~~~~~p-~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 156 LALEALGVPP-DEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHhCCCh-hhEEEEeCCHHHHHHHHHCCCcE
Confidence 3444444344 67889999999999999999853
No 116
>PLN02580 trehalose-phosphatase
Probab=96.99 E-value=0.016 Score=62.05 Aligned_cols=63 Identities=22% Similarity=0.158 Sum_probs=47.0
Q ss_pred hHHHHHHHHhhcCC---C---EEEEEcCCcccHHHHHh-----CCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 513 QKLRVVQSLQSVGK---H---VVGFLGDGINDSLALDA-----ANVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 513 ~K~~iv~~l~~~~~---~---~v~~iGDg~ND~~~l~~-----A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
+|...++.+.+..+ . .++++||+.||.+||+. +++||+|+++.... .|++.+ ++...|.+.++
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L--~dp~eV~~~L~ 374 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSL--RDPSEVMEFLK 374 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEc--CCHHHHHHHHH
Confidence 78888887766421 1 24899999999999996 69999999866433 578877 56777766664
No 117
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.98 E-value=0.0031 Score=65.91 Aligned_cols=112 Identities=17% Similarity=0.101 Sum_probs=71.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC---CC-ccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR---TT-HVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~---~~-~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
++.|++.+.++.|++.|+++.++|+.+......+-+..+.. .. .++.+.+.. ..+-.|+-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~----------------~~KP~p~~ 207 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP----------------KKKPDPDI 207 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC----------------CCCCCHHH
Confidence 57899999999999999999999999988888776665321 10 011111100 01112223
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe-cCC--cHHHHhhcCEEe
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV-DSG--ASVAKDLADIIL 566 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~-~~~--~~~~~~~ad~vl 566 (792)
-..+.+.+.-.. +.+++|||+.+|+.+-++||+.... ..+ .......+|+++
T Consensus 208 ~~~a~~~~~~~p-~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi 262 (286)
T PLN02779 208 YNLAAETLGVDP-SRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF 262 (286)
T ss_pred HHHHHHHhCcCh-HHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE
Confidence 344445554444 6788999999999999999985543 222 211123578877
No 118
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.97 E-value=0.007 Score=58.62 Aligned_cols=127 Identities=21% Similarity=0.186 Sum_probs=71.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhc
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSL---------------SLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKR 502 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~---------------~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~ 502 (792)
.+.|++.+++++|+++|+++.++|+.+. .....+.++.|+....++....... +
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~~~~--~--------- 97 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPHHPE--D--------- 97 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCCCCC--C---------
Confidence 4679999999999999999999998763 1122233445542111111000000 0
Q ss_pred ceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecCCc--H-HHHhhc--CEEeccCCchHHHH
Q 045750 503 ATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDSGA--S-VAKDLA--DIILLEKDLNVLVA 576 (792)
Q Consensus 503 ~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~~~--~-~~~~~a--d~vl~~~~~~~i~~ 576 (792)
..-..+-.|+--....+.+.-.. +.+++|||+.+|+.+-++||+. |++..+. . .....+ |+++ +++..+.+
T Consensus 98 ~~~~~KP~p~~~~~~~~~l~~~~-~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~el~~ 174 (181)
T PRK08942 98 GCDCRKPKPGMLLSIAERLNIDL-AGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLADLPQ 174 (181)
T ss_pred CCcCCCCCHHHHHHHHHHcCCCh-hhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHHHHH
Confidence 00001112333344444444444 7788999999999999999984 3333221 1 122234 7776 45666655
Q ss_pred HH
Q 045750 577 GV 578 (792)
Q Consensus 577 ~i 578 (792)
.+
T Consensus 175 ~l 176 (181)
T PRK08942 175 AL 176 (181)
T ss_pred HH
Confidence 54
No 119
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.97 E-value=0.0026 Score=67.31 Aligned_cols=108 Identities=8% Similarity=-0.096 Sum_probs=75.2
Q ss_pred ccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-C-ccccchhhhccCHHHHHHhhhcceEEEEeCh
Q 045750 434 TFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT-T-HVSTGPDLELLSQESFHERVKRATVLARLTP 511 (792)
Q Consensus 434 ~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~-~-~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p 511 (792)
...+++.|++.+++++|++.|++++++||++...+..+.+.+|+.. . ..+.|.+. .. ..+... --.+-.|
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~----~~---~~~~~~-~~~kp~p 254 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPP----DM---HFQREQ-GDKRPDD 254 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcc----hh---hhcccC-CCCCCcH
Confidence 3578999999999999999999999999999999999999998853 1 01111110 00 000000 0013345
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI 549 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi 549 (792)
+-+.+.++.+.....+.++|+||..+|+.+-+.||+-.
T Consensus 255 ~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 255 VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 66677776654322278999999999999999999963
No 120
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.95 E-value=0.0043 Score=59.06 Aligned_cols=114 Identities=11% Similarity=0.039 Sum_probs=74.7
Q ss_pred cEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceE
Q 045750 427 MVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGD-SLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATV 505 (792)
Q Consensus 427 l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd-~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v 505 (792)
........-+-++.|++.+.++.|+++|+++.++|+. ....+..+.+.+|+.....- ..+.+.+. ..+
T Consensus 34 ~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~----------~~~~~~Fd-~iv 102 (174)
T TIGR01685 34 SIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKT----------VPMHSLFD-DRI 102 (174)
T ss_pred CeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCc----------ccHHHhce-eee
Confidence 3455666666788999999999999999999999987 88899999999998511000 00000000 112
Q ss_pred EEEeChhhH--HHHHHHHhhc-----CCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 506 LARLTPTQK--LRVVQSLQSV-----GKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 506 ~~~~~p~~K--~~iv~~l~~~-----~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
.++..+..| .++.+.+.+. ..+.++++||+..|+.+-++|++-+..
T Consensus 103 ~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 103 EIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 222111122 2345555432 126799999999999999999996554
No 121
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.95 E-value=0.0016 Score=63.29 Aligned_cols=92 Identities=16% Similarity=0.117 Sum_probs=59.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+++|+++.++|+... +....+.+|+.. +.++++.+.. ..+-.|+-=.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~p~~~~ 148 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIK----------------KGKPDPEIFL 148 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcC----------------CCCCChHHHH
Confidence 5789999999999999999999997543 456778888742 1111111110 0111222223
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVG 548 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg 548 (792)
...+.+.-.. +.+++|||+.+|+.+-+.||+.
T Consensus 149 ~~~~~~~~~~-~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 149 AAAEGLGVSP-SECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHcCCCH-HHeEEEecCHHHHHHHHHcCCE
Confidence 3333333333 5688999999999999999984
No 122
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.93 E-value=0.0019 Score=59.56 Aligned_cols=107 Identities=10% Similarity=0.115 Sum_probs=76.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC----CCCCccccchhhhccCHHHHHHhhhcceEEE--EeCh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVG----IRTTHVSTGPDLELLSQESFHERVKRATVLA--RLTP 511 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~g----i~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~--~~~p 511 (792)
.++|+.++.++.+++.+++++++|+....-...+-.+.+ +....++++......+. ....+.. ..--
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg-------~h~i~~~~ds~fG 145 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDG-------QHSIKYTDDSQFG 145 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCC-------ceeeecCCccccC
Confidence 578999999999999999999999999999999888877 43222222222111110 0000111 1113
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD 552 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~ 552 (792)
.+|...++.+++.. +.+.++|||+.|+++-+.+|+-.|-.
T Consensus 146 ~dK~~vI~~l~e~~-e~~fy~GDsvsDlsaaklsDllFAK~ 185 (220)
T COG4359 146 HDKSSVIHELSEPN-ESIFYCGDSVSDLSAAKLSDLLFAKD 185 (220)
T ss_pred CCcchhHHHhhcCC-ceEEEecCCcccccHhhhhhhHhhHH
Confidence 57999999999998 88999999999999988888877653
No 123
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.86 E-value=0.0019 Score=61.95 Aligned_cols=97 Identities=19% Similarity=0.245 Sum_probs=69.8
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC--CCccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR--TTHVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~--~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
..++.|++.+.++.|+++|++++++|+..........+++|+. .+.++.+.+.... +-.|+-
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~----------------Kp~~~~ 138 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSR----------------KPDPDA 138 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSS----------------TTSHHH
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhh----------------hhHHHH
Confidence 3457899999999999999999999999999999999999986 2222222221110 011223
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI 549 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi 549 (792)
=..+++.+.-.. ..+++|||+..|+.+-++||+.-
T Consensus 139 ~~~~~~~~~~~p-~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 139 YRRALEKLGIPP-EEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHTSSG-GGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHcCCCc-ceEEEEeCCHHHHHHHHHcCCeE
Confidence 344555554444 67899999999999999999853
No 124
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.80 E-value=0.0065 Score=58.56 Aligned_cols=128 Identities=24% Similarity=0.164 Sum_probs=66.4
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHH---------------HHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcc
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLS---------------LAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRA 503 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~---------------~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~ 503 (792)
+.|++.++|++|+++|+++.++|.-+.. ....+..+.|+.-..++.......-. ..+. ..
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~-~~~~----~~ 101 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGV-EEFR----QV 101 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCccc-cccc----CC
Confidence 5789999999999999999999987741 11223333343211111000000000 0000 00
Q ss_pred eEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE--EecCCcH---HHHhhcCEEeccCCchHH
Q 045750 504 TVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI--SVDSGAS---VAKDLADIILLEKDLNVL 574 (792)
Q Consensus 504 ~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi--a~~~~~~---~~~~~ad~vl~~~~~~~i 574 (792)
.-..+-.|+--....+.+.-.. +.++||||..+|+.+-++|++.. .+..+.. .....+|+++ +++..+
T Consensus 102 ~~~~KP~p~~~~~a~~~~~~~~-~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i--~~~~el 174 (176)
T TIGR00213 102 CDCRKPKPGMLLQARKELHIDM-AQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVL--NSLADL 174 (176)
T ss_pred CCCCCCCHHHHHHHHHHcCcCh-hhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEe--ccHHHh
Confidence 0000111222233333333333 67889999999999999999953 4433321 1223478887 344443
No 125
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.73 E-value=0.0045 Score=62.23 Aligned_cols=119 Identities=12% Similarity=0.091 Sum_probs=75.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.+.++++++. ++++++|+........+.+++|+.. +.++.+.+... .+-.|+--.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~----------------~KP~~~~~~ 159 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGI----------------QKPDKEIFN 159 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCC----------------CCCCHHHHH
Confidence 5789999999999999 9999999999999999999999843 11111111000 011122223
Q ss_pred HHHHHH-hhcCCCEEEEEcCCc-ccHHHHHhCCe-eEEecC--CcHHHHhhcCEEeccCCchHHHH
Q 045750 516 RVVQSL-QSVGKHVVGFLGDGI-NDSLALDAANV-GISVDS--GASVAKDLADIILLEKDLNVLVA 576 (792)
Q Consensus 516 ~iv~~l-~~~~~~~v~~iGDg~-ND~~~l~~A~v-gia~~~--~~~~~~~~ad~vl~~~~~~~i~~ 576 (792)
..++.+ .-.. +.+++|||+. +|+.+-+.+|+ +|.+.. .++.....+++++ +++..+..
T Consensus 160 ~~~~~~~~~~~-~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 160 YALERMPKFSK-EEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHhcCCCc-hheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 334444 3233 6788999998 89999999998 444432 2222223456665 45555543
No 126
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.71 E-value=0.0099 Score=58.82 Aligned_cols=83 Identities=24% Similarity=0.264 Sum_probs=60.2
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEe-C-
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSL---AIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARL-T- 510 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~---a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-~- 510 (792)
.-|.-|++.++++.++++|++|+++|||.... +..--++.|++... .++-|. .
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~----------------------~LiLR~~~d 175 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWK----------------------HLILRGLED 175 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcC----------------------eeeecCCCC
Confidence 45889999999999999999999999999866 44444567775310 122222 1
Q ss_pred -----hhhHHHHHHHHhhcCCCEEEEEcCCcccHH
Q 045750 511 -----PTQKLRVVQSLQSVGKHVVGFLGDGINDSL 540 (792)
Q Consensus 511 -----p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~ 540 (792)
..-|.+.-+.+.+.|-.+++.+||..+|..
T Consensus 176 ~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 176 SNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred CCchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 112777777777777578888999999973
No 127
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.68 E-value=0.0079 Score=57.28 Aligned_cols=37 Identities=19% Similarity=0.306 Sum_probs=33.9
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 045750 442 SAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR 478 (792)
Q Consensus 442 ~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~ 478 (792)
.+...+.+|+++|++|+.+|.........+-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 3677899999999999999999999999999999984
No 128
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.67 E-value=0.0087 Score=61.07 Aligned_cols=64 Identities=22% Similarity=0.195 Sum_probs=45.6
Q ss_pred hhhHHHHHHHHhhcC---CCEEEEEcCCcccHHHHHhC--------CeeEEecCCcHHHHhhcCEEeccCCchHHHHHH
Q 045750 511 PTQKLRVVQSLQSVG---KHVVGFLGDGINDSLALDAA--------NVGISVDSGASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 511 p~~K~~iv~~l~~~~---~~~v~~iGDg~ND~~~l~~A--------~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
+.+|...++.+.+.. ...++++||+.||.+|++.+ +.+|+|+.+ ..+..|++++ ++...+.+.+
T Consensus 165 ~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g--~~~~~A~~~~--~~~~~v~~~L 239 (244)
T TIGR00685 165 FVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG--SKKTVAKFHL--TGPQQVLEFL 239 (244)
T ss_pred CCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC--CcCCCceEeC--CCHHHHHHHH
Confidence 346776666665542 14789999999999999999 578888633 2456789988 4666666655
No 129
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.65 E-value=0.0039 Score=60.58 Aligned_cols=91 Identities=19% Similarity=0.159 Sum_probs=61.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChh--
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPT-- 512 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~-- 512 (792)
-++.|++.++++.|++.|+++.++|+. ..+..+.+++|+.. +.++.+.+. .+..|.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~------------------~~~kp~~~ 146 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEV------------------KEGKPHPE 146 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhC------------------CCCCCChH
Confidence 467999999999999999999999998 56777888888742 111111110 011121
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG 548 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg 548 (792)
--....+.+.... +.+++|||+.+|+.+-++||+.
T Consensus 147 ~~~~~~~~~~~~~-~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 147 TFLLAAELLGVSP-NECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHHcCCCH-HHeEEEeCcHhhHHHHHHCCCe
Confidence 1122333333223 5688999999999999999885
No 130
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.63 E-value=0.026 Score=67.49 Aligned_cols=50 Identities=12% Similarity=0.077 Sum_probs=38.1
Q ss_pred CcEEEEecccCCCCChhHHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHHHh
Q 045750 426 DMVFLGLITFYDPPKDSAKQALWRL-AKKGVKAKLLTGDSLSLAIKICHEV 475 (792)
Q Consensus 426 ~l~~lG~i~~~d~~r~~~~~~I~~l-~~~Gi~v~~~Tgd~~~~a~~ia~~~ 475 (792)
|++++-.....-.+.+++.+++++| ++.|+.|+++|||...+.......+
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 4444433222346778999999997 7889999999999999999887543
No 131
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.61 E-value=0.0067 Score=58.72 Aligned_cols=93 Identities=23% Similarity=0.217 Sum_probs=62.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++.|+++|++++++|+..... ..+..++|+.. +.++.+.+.. ..+-.|+--.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 147 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVG----------------RGKPDPDIYL 147 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCC----------------CCCCCHHHHH
Confidence 578999999999999999999999999888 66656688742 1111111100 0011122223
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVG 548 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg 548 (792)
.+.+.+.... ..++++||+..|+.+-+++|+-
T Consensus 148 ~~~~~~~~~~-~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 148 LALKKLGLKP-EECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHcCCCc-ceEEEEcCCHHHHHHHHHcCCE
Confidence 3444444344 7789999999999999999883
No 132
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.58 E-value=0.02 Score=58.79 Aligned_cols=47 Identities=19% Similarity=0.336 Sum_probs=36.9
Q ss_pred EecccCCC----CChhHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCC
Q 045750 431 GLITFYDP----PKDSAKQALWRLAKKGVKAKLLTGDSLSL---AIKICHEVGI 477 (792)
Q Consensus 431 G~i~~~d~----~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~---a~~ia~~~gi 477 (792)
|++.-.+. +-|++.++|++|+++|++++++||++..+ .....+++|+
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~ 63 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGF 63 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 44444555 88999999999999999999999977765 4445566787
No 133
>PRK09449 dUMP phosphatase; Provisional
Probab=96.57 E-value=0.0087 Score=60.22 Aligned_cols=118 Identities=18% Similarity=0.158 Sum_probs=74.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEe----Ch--
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARL----TP-- 511 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~----~p-- 511 (792)
++.|++.++++.|+ +|+++.++|+.....+...-+++|+... + ...+.+.. .|
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~-------------------f-d~v~~~~~~~~~KP~p 153 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDY-------------------F-DLLVISEQVGVAKPDV 153 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHH-------------------c-CEEEEECccCCCCCCH
Confidence 46899999999999 6899999999998888888888888420 0 00122211 12
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCee-EEec-CCcH-HHHhhcCEEeccCCchHHHHHH
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGI-NDSLALDAANVG-ISVD-SGAS-VAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~vg-ia~~-~~~~-~~~~~ad~vl~~~~~~~i~~~i 578 (792)
+-=..+++.+.-...+.+++|||+. +|+.+-++||+. |.+. .+.. .....+|+++ +++..+.+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 1112233333221125789999998 799999999985 4444 2211 1112467776 5566665544
No 134
>PLN02940 riboflavin kinase
Probab=96.57 E-value=0.0075 Score=65.72 Aligned_cols=112 Identities=18% Similarity=0.169 Sum_probs=72.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICH-EVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~-~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
++.|++.+.++.|++.|+++.++|+.....+....+ ..|+.. +.++++++.. ..+-.|+--
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~----------------~~KP~p~~~ 156 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVE----------------KGKPSPDIF 156 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcC----------------CCCCCHHHH
Confidence 467999999999999999999999999888877665 677732 1222221110 011122333
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecCC--cHHHHhhcCEEe
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDSG--ASVAKDLADIIL 566 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~~--~~~~~~~ad~vl 566 (792)
..+++.+.-.. +.+++|||+.+|+.+-++||+. |++..+ .......+|.++
T Consensus 157 ~~a~~~lgv~p-~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 157 LEAAKRLNVEP-SNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHcCCCh-hHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 34444444444 6789999999999999999985 444432 222233456655
No 135
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.35 E-value=0.019 Score=58.59 Aligned_cols=86 Identities=21% Similarity=0.171 Sum_probs=60.9
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSL---AIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~---a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
..++-|++.+.++.+++.|+++.++|++.... +....++.|++... ...++.+-...
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~--------------------~d~lllr~~~~ 175 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD--------------------EEHLLLKKDKS 175 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC--------------------cceEEeCCCCC
Confidence 45678999999999999999999999998543 34556778885310 00144443334
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHH
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLAL 542 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l 542 (792)
.|..-.+.+.+.. ..++++||..+|....
T Consensus 176 ~K~~rr~~I~~~y-~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 176 SKESRRQKVQKDY-EIVLLFGDNLLDFDDF 204 (266)
T ss_pred CcHHHHHHHHhcC-CEEEEECCCHHHhhhh
Confidence 5666666666655 7899999999998654
No 136
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.32 E-value=0.0099 Score=55.33 Aligned_cols=97 Identities=19% Similarity=0.170 Sum_probs=60.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCCCCccccchhh-hccCHHHHHHhhh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSL---------------SLAIKICHEVGIRTTHVSTGPDL-ELLSQESFHERVK 501 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~---------------~~a~~ia~~~gi~~~~~~~g~~~-~~~~~~~~~~~~~ 501 (792)
++.|++.++++.|+++|+++.++|+.+. ..+..+.+++|+.....+..... ..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~----------- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPAD----------- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCC-----------
Confidence 4789999999999999999999998763 45566778888752110000000 00
Q ss_pred cceEEEEeCh--hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 045750 502 RATVLARLTP--TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI 549 (792)
Q Consensus 502 ~~~v~~~~~p--~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi 549 (792)
......| +-=..+++.+.-.. +.+++|||...|+.+-+.+++-.
T Consensus 96 ---~~~~~KP~~~~~~~~~~~~~~~~-~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 96 ---NCSCRKPKPGLILEALKRLGVDA-SRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ---CCCCCCCCHHHHHHHHHHcCCCh-HHEEEEcCCHHHHHHHHHCCCCE
Confidence 0000012 11122333333233 67899999999999999999843
No 137
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.31 E-value=0.011 Score=56.39 Aligned_cols=90 Identities=16% Similarity=0.206 Sum_probs=63.7
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeCh--hh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDS-LSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTP--TQ 513 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~-~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p--~~ 513 (792)
..+-|++.++++.|++.|++++++|+.+ ...+..+.+.+|+.. .+....| +-
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~-------------------------~~~~~KP~p~~ 96 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV-------------------------LPHAVKPPGCA 96 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE-------------------------EcCCCCCChHH
Confidence 3678999999999999999999999988 677788888888742 1111122 22
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCe-eEEec
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGI-NDSLALDAANV-GISVD 552 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~v-gia~~ 552 (792)
-..+.+.+.... +.+++|||.. .|+.+-+.||+ +|.+.
T Consensus 97 ~~~~l~~~~~~~-~~~l~IGDs~~~Di~aA~~aGi~~i~v~ 136 (170)
T TIGR01668 97 FRRAHPEMGLTS-EQVAVVGDRLFTDVMGGNRNGSYTILVE 136 (170)
T ss_pred HHHHHHHcCCCH-HHEEEECCcchHHHHHHHHcCCeEEEEc
Confidence 223333333233 6699999998 79999999998 44443
No 138
>PLN02811 hydrolase
Probab=96.27 E-value=0.0097 Score=59.68 Aligned_cols=96 Identities=17% Similarity=0.142 Sum_probs=59.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH-HHHHhCCCC--Cccccch--hhhccCHHHHHHhhhcceEEEEeChh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIK-ICHEVGIRT--THVSTGP--DLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~-ia~~~gi~~--~~~~~g~--~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
++.|++.++|+.|++.|+++.++||-....... ..+..|+.. ..++++. +.. ..+-.|+
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~----------------~~KP~p~ 141 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVK----------------QGKPAPD 141 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhcc----------------CCCCCcH
Confidence 568999999999999999999999987654332 222233321 1111111 000 0011222
Q ss_pred hHHHHHHHHh---hcCCCEEEEEcCCcccHHHHHhCCeeEE
Q 045750 513 QKLRVVQSLQ---SVGKHVVGFLGDGINDSLALDAANVGIS 550 (792)
Q Consensus 513 ~K~~iv~~l~---~~~~~~v~~iGDg~ND~~~l~~A~vgia 550 (792)
--...++.+. -.. +.+++|||+..|+.+-++||+...
T Consensus 142 ~~~~a~~~~~~~~~~~-~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 142 IFLAAARRFEDGPVDP-GKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred HHHHHHHHhCCCCCCc-cceEEEeccHhhHHHHHHCCCeEE
Confidence 2334444443 223 678999999999999999999433
No 139
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.23 E-value=0.0097 Score=56.15 Aligned_cols=98 Identities=19% Similarity=0.196 Sum_probs=60.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhc
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDS---------------LSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKR 502 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~---------------~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~ 502 (792)
++-|++.+++++|+++|++++++|... ...+..+.+.+|+.-..++.+..... +
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~~--~--------- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFPD--D--------- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCCC--C---------
Confidence 467899999999999999999999853 44566677778875211111100000 0
Q ss_pred ceEEEEeChhhHHHHHHHHhh-cC--CCEEEEEcCCcccHHHHHhCCeeEE
Q 045750 503 ATVLARLTPTQKLRVVQSLQS-VG--KHVVGFLGDGINDSLALDAANVGIS 550 (792)
Q Consensus 503 ~~v~~~~~p~~K~~iv~~l~~-~~--~~~v~~iGDg~ND~~~l~~A~vgia 550 (792)
.. ....| |.+++..+.+ .+ .+.+.+|||+.+|+.+-++|++...
T Consensus 98 -~~-~~~KP--~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 -NC-DCRKP--KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -CC-CCCCC--CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00 00012 2233333222 21 2568899999999999999999544
No 140
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.19 E-value=0.006 Score=56.86 Aligned_cols=94 Identities=9% Similarity=-0.061 Sum_probs=64.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC---CccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT---THVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~---~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
-++||++.+.++.|+ .++++.++|+-+...+..+.+.+|+.. ..++++++... ..|.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~------------------~KP~- 103 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF------------------VKGK- 103 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc------------------cCCe-
Confidence 357999999999999 579999999999999999999998842 22222222111 1121
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
-.+.++.+.... +.+++|||..+|+.+-+++++-|..
T Consensus 104 ~~k~l~~l~~~p-~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 104 YVKDLSLLGRDL-SNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred EeecHHHcCCCh-hcEEEEECCHHHhhcCccCEEEecC
Confidence 111223333334 7899999999999987777666543
No 141
>PRK10444 UMP phosphatase; Provisional
Probab=96.18 E-value=0.035 Score=56.53 Aligned_cols=47 Identities=21% Similarity=0.321 Sum_probs=40.9
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH---hCC
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHE---VGI 477 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~---~gi 477 (792)
|++.-.+.+-|++.+++++|+++|++++++|++...+...++++ +|+
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 55666778899999999999999999999999999888887776 466
No 142
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.09 E-value=0.023 Score=52.15 Aligned_cols=110 Identities=15% Similarity=0.231 Sum_probs=77.7
Q ss_pred HHHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 045750 390 GEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAI 469 (792)
Q Consensus 390 ~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~ 469 (792)
.+.+..+|.+.+.+=..+ ++++. =..+..|++++-+.+++++|++++++|..++..+.
T Consensus 20 ~~~L~~~Gikgvi~DlDN--------------------TLv~w--d~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~ 77 (175)
T COG2179 20 PDILKAHGIKGVILDLDN--------------------TLVPW--DNPDATPELRAWLAELKEAGIKVVVVSNNKESRVA 77 (175)
T ss_pred HHHHHHcCCcEEEEeccC--------------------ceecc--cCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHH
Confidence 367788899988763221 22221 13467899999999999999999999999999999
Q ss_pred HHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhH--HHHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCC
Q 045750 470 KICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQK--LRVVQSLQSVGKHVVGFLGDGI-NDSLALDAAN 546 (792)
Q Consensus 470 ~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K--~~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~ 546 (792)
..++.+|++. ++--..|-.+ .+.++.++-.. +.|+||||.. .|+-+=..||
T Consensus 78 ~~~~~l~v~f-------------------------i~~A~KP~~~~fr~Al~~m~l~~-~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 78 RAAEKLGVPF-------------------------IYRAKKPFGRAFRRALKEMNLPP-EEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred hhhhhcCCce-------------------------eecccCccHHHHHHHHHHcCCCh-hHEEEEcchhhhhhhcccccC
Confidence 9999999973 3322333322 23444444444 7899999984 6877766666
Q ss_pred e
Q 045750 547 V 547 (792)
Q Consensus 547 v 547 (792)
+
T Consensus 132 ~ 132 (175)
T COG2179 132 M 132 (175)
T ss_pred c
Confidence 6
No 143
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.02 E-value=0.041 Score=50.88 Aligned_cols=103 Identities=20% Similarity=0.282 Sum_probs=72.7
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH---HHHHh-----CCCCCccccchh--hhccCHHHHHHhhhcceE
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIK---ICHEV-----GIRTTHVSTGPD--LELLSQESFHERVKRATV 505 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~---ia~~~-----gi~~~~~~~g~~--~~~~~~~~~~~~~~~~~v 505 (792)
.|..++++.+..++++++|++++.+|+|+...+.. ...+. +++..-++...+ +..+..| +
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~rE----------v 94 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHRE----------V 94 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhcc----------c
Confidence 36899999999999999999999999999765544 33444 454433332211 1111111 3
Q ss_pred EEEeChhhHHHHHHHHhhc----CCCEEEEEcCCcccHHHHHhCCee
Q 045750 506 LARLTPTQKLRVVQSLQSV----GKHVVGFLGDGINDSLALDAANVG 548 (792)
Q Consensus 506 ~~~~~p~~K~~iv~~l~~~----~~~~v~~iGDg~ND~~~l~~A~vg 548 (792)
..+-..+.|...++.++.. +....++.|+..+|+.+.+++++.
T Consensus 95 i~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 95 ISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 3444556888888888875 446788899999999999988875
No 144
>PLN03017 trehalose-phosphatase
Probab=96.02 E-value=0.19 Score=53.43 Aligned_cols=48 Identities=15% Similarity=0.162 Sum_probs=38.0
Q ss_pred CcEEEEecccCC--CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 045750 426 DMVFLGLITFYD--PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHE 474 (792)
Q Consensus 426 ~l~~lG~i~~~d--~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~ 474 (792)
|++++-++.-.| .+.+++.++|++|. +|++++++|||.......+...
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l 168 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKL 168 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhcc
Confidence 446665554333 48899999999999 7899999999999999988433
No 145
>PLN02423 phosphomannomutase
Probab=95.88 E-value=0.057 Score=55.00 Aligned_cols=44 Identities=27% Similarity=0.327 Sum_probs=35.5
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcC----CcccHHHHHh-CCeeEEecCCcHH
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGD----GINDSLALDA-ANVGISVDSGASV 557 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGD----g~ND~~~l~~-A~vgia~~~~~~~ 557 (792)
.+|..-++.++ .. +.|+++|| |.||.+||+. --.|+++.+-.+.
T Consensus 188 vnKg~al~~L~-~~-~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~ 236 (245)
T PLN02423 188 WDKTYCLQFLE-DF-DEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDT 236 (245)
T ss_pred CCHHHHHHHhc-Cc-CeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHH
Confidence 47888899998 44 78999999 8999999997 5569999654443
No 146
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.85 E-value=0.019 Score=54.48 Aligned_cols=94 Identities=10% Similarity=-0.011 Sum_probs=59.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEE
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLS------------LAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVL 506 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~------------~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 506 (792)
+-|++.+++++|+++|+++.++|..+.. .+..+.+++|+....++.+... ..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~ii~~~~~----------------~~ 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQVLAATHAG----------------LY 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEEEEEecCCC----------------CC
Confidence 3489999999999999999999976542 4567788888853222111100 00
Q ss_pred EEeChhhHHHHHHHHh--hcCCCEEEEEcCCc--------ccHHHHHhCCeeE
Q 045750 507 ARLTPTQKLRVVQSLQ--SVGKHVVGFLGDGI--------NDSLALDAANVGI 549 (792)
Q Consensus 507 ~~~~p~~K~~iv~~l~--~~~~~~v~~iGDg~--------ND~~~l~~A~vgi 549 (792)
..-.|+--..+.+.+. -.. +.++||||.. +|+.+-++||+-.
T Consensus 107 ~KP~p~~~~~~~~~~~~~~~~-~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 107 RKPMTGMWEYLQSQYNSPIKM-TRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCccHHHHHHHHHcCCCCCc-hhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 0011222233334333 222 6788999986 6999988888754
No 147
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=95.80 E-value=0.023 Score=56.08 Aligned_cols=93 Identities=15% Similarity=0.124 Sum_probs=59.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++-|++.++++.|+++|+++.++|+-... .....+++|+.. +.++.+.+.. ..+-.|+-=.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~----------------~~KP~~~~~~ 167 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVG----------------AEKPDPKIFQ 167 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccC----------------CCCCCHHHHH
Confidence 57799999999999999999999987654 466777788732 1111111000 0001121122
Q ss_pred HHHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCee
Q 045750 516 RVVQSLQSVGKHVVGFLGDGI-NDSLALDAANVG 548 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~vg 548 (792)
.+++.+.-.. ..+++|||+. +|+.+-++||+-
T Consensus 168 ~~~~~~~~~~-~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 168 EALERAGISP-EEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHcCCCh-hHEEEECCCchHHHHHHHHcCCe
Confidence 2333333333 6789999997 899999998874
No 148
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.76 E-value=0.03 Score=55.70 Aligned_cols=99 Identities=16% Similarity=0.116 Sum_probs=66.9
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC---CCCCccccchhhhccCHHHHHHhhhcceEEEEeChh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVG---IRTTHVSTGPDLELLSQESFHERVKRATVLARLTPT 512 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~g---i~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 512 (792)
+-++.|++.+++++|+++|+++.++|..+......+.+..+ +.. .+++ .+. ..+...-.|+
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~--~f~~-------------~fd-~~~g~KP~p~ 156 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP--YFSG-------------YFD-TTVGLKTEAQ 156 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh--hcce-------------EEE-eCcccCCCHH
Confidence 45789999999999999999999999998887777766653 211 0000 000 0111122333
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
-=..+.+.+.-.. +.++++||...|+.+-++||+-...
T Consensus 157 ~y~~i~~~lgv~p-~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 157 SYVKIAGQLGSPP-REILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred HHHHHHHHhCcCh-hHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 3345555555444 6789999999999999999996543
No 149
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=95.75 E-value=0.033 Score=50.36 Aligned_cols=93 Identities=14% Similarity=0.117 Sum_probs=58.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeC--hhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGD-SLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLT--PTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd-~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K 514 (792)
++.|++.+.++.|+++|+++.++|+. ....+..+.+..|. ...+. + + .+.++.. +.++.. |+.=
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~-~~~i~-~--l----~~~f~~~-----~~~~~~pkp~~~ 95 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED-FGIIF-P--L----AEYFDPL-----TIGYWLPKSPRL 95 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc-cccch-h--h----Hhhhhhh-----hhcCCCcHHHHH
Confidence 68999999999999999999999999 78777777777761 00000 0 0 0001110 111111 2322
Q ss_pred HHHHHHHh--hcCCCEEEEEcCCcccHHHHHh
Q 045750 515 LRVVQSLQ--SVGKHVVGFLGDGINDSLALDA 544 (792)
Q Consensus 515 ~~iv~~l~--~~~~~~v~~iGDg~ND~~~l~~ 544 (792)
..+++.+. -.. +.++++||...|...++.
T Consensus 96 ~~a~~~lg~~~~p-~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 96 VEIALKLNGVLKP-KSILFVDDRPDNNEEVDY 126 (128)
T ss_pred HHHHHHhcCCCCc-ceEEEECCCHhHHHHHHh
Confidence 34444444 333 789999999999877654
No 150
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.68 E-value=0.073 Score=54.22 Aligned_cols=91 Identities=16% Similarity=0.206 Sum_probs=60.7
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHhCCCC---CccccchhhhccCHHHHHHhhhcceE
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAI--KICHEVGIRT---THVSTGPDLELLSQESFHERVKRATV 505 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~--~ia~~~gi~~---~~~~~g~~~~~~~~~~~~~~~~~~~v 505 (792)
|.+.-...+-|++++++++|+++|+++.++|........ ...+++|+.. +.+++..+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~----------------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEI----------------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHH-----------------
Confidence 555567788999999999999999999999997665444 5668888863 121221111
Q ss_pred EEEeChhhHHHHHHHHhh---cCCCEEEEEcCCcccHHHHHhCC
Q 045750 506 LARLTPTQKLRVVQSLQS---VGKHVVGFLGDGINDSLALDAAN 546 (792)
Q Consensus 506 ~~~~~p~~K~~iv~~l~~---~~~~~v~~iGDg~ND~~~l~~A~ 546 (792)
....+.+.+++ .+ ..+.++||+.+|...+..++
T Consensus 80 -------~~~~l~~~~~~~~~~~-~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 -------AVQMILESKKRFDIRN-GIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -------HHHHHHhhhhhccCCC-ceEEEeCCcccchhhhcCCC
Confidence 11122222222 23 67899999999998886544
No 151
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.65 E-value=0.029 Score=52.55 Aligned_cols=88 Identities=22% Similarity=0.212 Sum_probs=56.2
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHH
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLR 516 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 516 (792)
..+++.+.++.|+++|+++.++|+.....+....+.. +.. ..++...+ +..+-.|+--..
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~-----------------~~~Kp~~~~~~~ 126 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDE-----------------FGAKPEPEIFLA 126 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCC-----------------CCCCcCHHHHHH
Confidence 3478999999999999999999999999998887775 321 11110000 000111222222
Q ss_pred HHHHHhhcCCCEEEEEcCCcccHHHHHhCC
Q 045750 517 VVQSLQSVGKHVVGFLGDGINDSLALDAAN 546 (792)
Q Consensus 517 iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~ 546 (792)
+.+.+.- .. .+++|||+.+|+.+-++|+
T Consensus 127 ~~~~~~~-~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 127 ALESLGL-PP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHcCC-CC-CEEEEeCCHHHHHHHHHcc
Confidence 2232222 22 6889999999999988775
No 152
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.26 E-value=0.073 Score=65.71 Aligned_cols=127 Identities=14% Similarity=0.078 Sum_probs=81.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC-C--CccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIR-T--THVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~-~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
.+-|++.+.++.|+++|+++.++|+.....+....+++|+. . +.++.+.+... .+-.|+--
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~----------------~KP~Pe~~ 224 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFEN----------------LKPAPDIF 224 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccccc----------------CCCCHHHH
Confidence 35799999999999999999999999999999999999985 1 22222221110 01122333
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEecCC---cHHHHhhcCEEeccCCchHHHHHHHHh
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISVDSG---ASVAKDLADIILLEKDLNVLVAGVERG 581 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~~~~---~~~~~~~ad~vl~~~~~~~i~~~i~~g 581 (792)
....+.+.-.. +.+++|||..+|+.+-++|++ .|++..+ .+.....+|+++.+-..-.+..++..|
T Consensus 225 ~~a~~~lgv~p-~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~ 294 (1057)
T PLN02919 225 LAAAKILGVPT-SECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGG 294 (1057)
T ss_pred HHHHHHcCcCc-ccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcC
Confidence 34445554444 678899999999999999999 4445422 233344677777432222244444433
No 153
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.26 E-value=0.062 Score=46.22 Aligned_cols=90 Identities=21% Similarity=0.258 Sum_probs=56.4
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCCCCccccchhhhccCHHHHHHhhhcceEEE
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKIC---HEVGIRTTHVSTGPDLELLSQESFHERVKRATVLA 507 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia---~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 507 (792)
|++...+++=|++.++|+.|+++|++++++|.....+...++ +++|++... ..++.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~---------------------~~i~t 65 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDE---------------------DEIIT 65 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--G---------------------GGEEE
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCc---------------------CEEEC
Confidence 556668889999999999999999999999998865554444 567775210 00221
Q ss_pred EeChhhHHHHHHHHhh-cCCCEEEEEcCCcccHHHHHhCCe
Q 045750 508 RLTPTQKLRVVQSLQS-VGKHVVGFLGDGINDSLALDAANV 547 (792)
Q Consensus 508 ~~~p~~K~~iv~~l~~-~~~~~v~~iGDg~ND~~~l~~A~v 547 (792)
|. ....+.+++ .+...|.++|.. .....++.+|+
T Consensus 66 ---s~--~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 66 ---SG--MAAAEYLKEHKGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp ---HH--HHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTTE
T ss_pred ---hH--HHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcCC
Confidence 11 123344444 333789999975 66667777664
No 154
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.15 E-value=0.078 Score=56.53 Aligned_cols=99 Identities=18% Similarity=0.176 Sum_probs=60.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGD---------------SLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVK 501 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd---------------~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~ 501 (792)
-++.|++.+++++|+++|++++++|+- ....+..+.+..|+....++-+.... .++
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~i~~~~~--sd~------- 99 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDEVLICPHFP--EDN------- 99 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceeeEEEeCCcC--ccc-------
Confidence 477899999999999999999999984 23345566677776421111000000 000
Q ss_pred cceEEEEeChhhHHHHHHHH-hhc--CCCEEEEEcCCcccHHHHHhCCeeEE
Q 045750 502 RATVLARLTPTQKLRVVQSL-QSV--GKHVVGFLGDGINDSLALDAANVGIS 550 (792)
Q Consensus 502 ~~~v~~~~~p~~K~~iv~~l-~~~--~~~~v~~iGDg~ND~~~l~~A~vgia 550 (792)
..+ ..-|..++..+ ++. ....+.||||+.+|..+-+.|++...
T Consensus 100 ---~~~---rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 100 ---CSC---RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred ---CCC---CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 000 11122233222 222 12678899999999999999999543
No 155
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=95.10 E-value=0.027 Score=56.56 Aligned_cols=94 Identities=13% Similarity=0.105 Sum_probs=63.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC---ccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT---HVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~---~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
++.|++.++++.| ++++.++|+.....+...-+++|+... .++++.+... .+-.|+--
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~----------------~KP~p~~~ 148 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQR----------------WKPDPALM 148 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCC----------------CCCChHHH
Confidence 4568999999998 499999999998888888888888531 2222222110 01122333
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
....+.+.-.. +.+++|||+.+|+.+-++||+.+..
T Consensus 149 ~~a~~~~~~~p-~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 149 FHAAEAMNVNV-ENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHcCCCH-HHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 33444444333 6688999999999999999997653
No 156
>PHA02597 30.2 hypothetical protein; Provisional
Probab=95.03 E-value=0.072 Score=52.30 Aligned_cols=99 Identities=15% Similarity=0.147 Sum_probs=58.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
++.|++.+++++|++.+ +.+++|..+.......-+.+|+.... . ..+ ...+.++..+ .|.++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f--~-------------~~f-~~i~~~~~~~-~kp~~ 135 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF--P-------------GAF-SEVLMCGHDE-SKEKL 135 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC--C-------------Ccc-cEEEEeccCc-ccHHH
Confidence 46899999999999985 56677776555544455666663100 0 000 0012222222 23343
Q ss_pred HH-HHhhcCCCEEEEEcCCcccHHHHHhC--Cee-EEecCC
Q 045750 518 VQ-SLQSVGKHVVGFLGDGINDSLALDAA--NVG-ISVDSG 554 (792)
Q Consensus 518 v~-~l~~~~~~~v~~iGDg~ND~~~l~~A--~vg-ia~~~~ 554 (792)
+. .+++.+.+.+++|||..+|+.+-++| |+- |.+..+
T Consensus 136 ~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~ 176 (197)
T PHA02597 136 FIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRG 176 (197)
T ss_pred HHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecch
Confidence 33 33333335688999999999999999 994 344444
No 157
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.96 E-value=0.14 Score=48.06 Aligned_cols=90 Identities=19% Similarity=0.158 Sum_probs=69.8
Q ss_pred CCCCChhHHHHHHHHHhCCCe--EEEEcCC-------CHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEE
Q 045750 436 YDPPKDSAKQALWRLAKKGVK--AKLLTGD-------SLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVL 506 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~--v~~~Tgd-------~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 506 (792)
++++.|+..+.+++|++.+.. ++++|.. +...|..+.+.+|++ ++
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--------------------------vl 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--------------------------VL 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc--------------------------EE
Confidence 678899999999999999874 9999997 489999999999986 33
Q ss_pred E--EeChhhHHHHHHHHhhc----CCCEEEEEcCCc-ccHHHHHhCC-eeEEe
Q 045750 507 A--RLTPTQKLRVVQSLQSV----GKHVVGFLGDGI-NDSLALDAAN-VGISV 551 (792)
Q Consensus 507 ~--~~~p~~K~~iv~~l~~~----~~~~v~~iGDg~-ND~~~l~~A~-vgia~ 551 (792)
. ...|.-..++.+.++.+ ..+.+++|||-. .|+-|=...| .+|=+
T Consensus 111 ~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv 163 (168)
T PF09419_consen 111 RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILV 163 (168)
T ss_pred EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEE
Confidence 2 34676677888888765 127899999984 6877765555 34433
No 158
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=94.89 E-value=0.043 Score=54.58 Aligned_cols=96 Identities=19% Similarity=0.084 Sum_probs=58.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEE----eC
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSL--AIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLAR----LT 510 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~--a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~----~~ 510 (792)
-++.|++.++++.|+++|+++.++|+..... ........|+.. .+.. .+.+. ..
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~-------------------~fd~-v~~s~~~~~~K 152 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMA-------------------LFDA-VVESCLEGLRK 152 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHh-------------------hCCE-EEEeeecCCCC
Confidence 4678999999999999999999999875432 222222233311 0100 11111 11
Q ss_pred h--hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCee-EEecC
Q 045750 511 P--TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVG-ISVDS 553 (792)
Q Consensus 511 p--~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg-ia~~~ 553 (792)
| +--..+.+.+.-.. +.+++|||...|+.+-++||+- |.+.+
T Consensus 153 P~p~~~~~~~~~~g~~~-~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 153 PDPRIYQLMLERLGVAP-EECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred CCHHHHHHHHHHcCCCH-HHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 2 22223334443333 5688899999999999999994 44433
No 159
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.89 E-value=0.12 Score=51.74 Aligned_cols=102 Identities=21% Similarity=0.242 Sum_probs=68.2
Q ss_pred CCChhHHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeCh-h
Q 045750 438 PPKDSAKQALWRL--AKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTP-T 512 (792)
Q Consensus 438 ~~r~~~~~~I~~l--~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p-~ 512 (792)
|+.|+.+++++.+ ++.|+.++++|.-+..-...+-+.-|+... .+++++...+-+. .+.-......-|.++.| .
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G-~l~v~pyh~h~C~~C~~Nm 149 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADG-RLRVRPYHSHGCSLCPPNM 149 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCc-eEEEeCccCCCCCcCCCcc
Confidence 6789999999999 568999999999999999999999999542 3444432211100 00000000012334443 4
Q ss_pred hHHHHHHHHhhc----C--CCEEEEEcCCcccHH
Q 045750 513 QKLRVVQSLQSV----G--KHVVGFLGDGINDSL 540 (792)
Q Consensus 513 ~K~~iv~~l~~~----~--~~~v~~iGDg~ND~~ 540 (792)
=|..+++.+++. | ..+|.+||||.||.-
T Consensus 150 CK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~C 183 (234)
T PF06888_consen 150 CKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFC 183 (234)
T ss_pred chHHHHHHHHHHHhhcCCCcceEEEECCCCCCcC
Confidence 688888887765 2 268999999999954
No 160
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=94.75 E-value=0.17 Score=51.75 Aligned_cols=48 Identities=13% Similarity=0.097 Sum_probs=40.7
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHhCCC
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLTG---DSLSLAIKICHEVGIR 478 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tg---d~~~~a~~ia~~~gi~ 478 (792)
|++.-.+.+-|++.++|++|+++|++++++|| +.........+++|++
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44445677778999999999999999999996 8888888888899984
No 161
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=94.70 E-value=0.039 Score=55.36 Aligned_cols=82 Identities=21% Similarity=0.261 Sum_probs=58.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCCCC-CccccchhhhccCHHHHHHhhhcceEEEEe-C-
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSL---AIKICHEVGIRT-THVSTGPDLELLSQESFHERVKRATVLARL-T- 510 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~---a~~ia~~~gi~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-~- 510 (792)
++.-|++.+.++.++++|++|+++|||+... +..=.++.|... +. ++.|. .
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~-----------------------l~lr~~~~ 170 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDH-----------------------LILRPDKD 170 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSC-----------------------GEEEEESS
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccch-----------------------hccccccc
Confidence 3566889999999999999999999998762 223345666542 11 22222 1
Q ss_pred ------hhhHHHHHHHHhhcCCCEEEEEcCCcccHHH
Q 045750 511 ------PTQKLRVVQSLQSVGKHVVGFLGDGINDSLA 541 (792)
Q Consensus 511 ------p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~ 541 (792)
...|..-.+.+++.|.++++.+||..+|..-
T Consensus 171 ~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 171 PSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp TSS------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 2348888888888865788899999999776
No 162
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.65 E-value=0.11 Score=55.44 Aligned_cols=91 Identities=12% Similarity=0.060 Sum_probs=67.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----hCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHE----VGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~----~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
++.+++.++++.|+++|++..++|..+...+..+.++ +|+.... ......+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-----------------------~~~~~~~~p 87 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-----------------------DARSINWGP 87 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-----------------------eEEEEecCc
Confidence 3578999999999999999999999999999999888 7774311 111222334
Q ss_pred HHHHH----HHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec
Q 045750 514 KLRVV----QSLQSVGKHVVGFLGDGINDSLALDAANVGISVD 552 (792)
Q Consensus 514 K~~iv----~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~ 552 (792)
|.+.+ +.+.-.. ..++++||...|+.+.+++...+.+.
T Consensus 88 k~~~i~~~~~~l~i~~-~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 88 KSESLRKIAKKLNLGT-DSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred hHHHHHHHHHHhCCCc-CcEEEECCCHHHHHHHHHHCCCCccC
Confidence 44433 3333333 77899999999999999988876553
No 163
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=94.59 E-value=0.13 Score=49.31 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=69.7
Q ss_pred CCChhHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeCh-hh
Q 045750 438 PPKDSAKQALWRLAKKGV-KAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTP-TQ 513 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi-~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p-~~ 513 (792)
|.-|+..++|+.+++.|- .+.++|--|..-...+-+..|+.+ ..+.+++...+-.-.-.-.-.-...-|.++.+ .=
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmC 163 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMC 163 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhh
Confidence 678999999999999997 899999999999999999999832 11222211110000000000000011222222 22
Q ss_pred HHHHHHHHhhc----CC--CEEEEEcCCccc-HHHHHhCCeeEEec
Q 045750 514 KLRVVQSLQSV----GK--HVVGFLGDGIND-SLALDAANVGISVD 552 (792)
Q Consensus 514 K~~iv~~l~~~----~~--~~v~~iGDg~ND-~~~l~~A~vgia~~ 552 (792)
|..++..++.. |. +++.++|||.|| +|+++...--+||-
T Consensus 164 Kg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 164 KGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 55555555442 21 488999999999 67877777777774
No 164
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=94.53 E-value=0.096 Score=51.54 Aligned_cols=91 Identities=14% Similarity=0.126 Sum_probs=57.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-hCCCCCccccchhhhccCHHHHHHhhhcceEEEEe----Ch-
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHE-VGIRTTHVSTGPDLELLSQESFHERVKRATVLARL----TP- 511 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~-~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~----~p- 511 (792)
++.|++.++++.|+++|+++.++|+-+.........+ .++.. .+. ..+.+.. .|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~-------------------~fd-~v~~s~~~~~~KP~ 143 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRA-------------------AAD-HIYLSQDLGMRKPE 143 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHH-------------------hcC-EEEEecccCCCCCC
Confidence 4689999999999999999999999886654433222 23211 000 0111111 12
Q ss_pred -hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 045750 512 -TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI 549 (792)
Q Consensus 512 -~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi 549 (792)
+-=..+++.+.-.. +.++++||+..|+.+-++||+..
T Consensus 144 p~~~~~~~~~~~~~p-~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 144 ARIYQHVLQAEGFSA-ADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHHcCCCh-hHeEEeCCCHHHHHHHHHcCCEE
Confidence 22223334443334 67889999999999999999954
No 165
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=93.94 E-value=0.058 Score=48.16 Aligned_cols=51 Identities=10% Similarity=0.095 Sum_probs=40.7
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHH---------------HHHHHHhCCCCCccccchh
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLA---------------IKICHEVGIRTTHVSTGPD 487 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a---------------~~ia~~~gi~~~~~~~g~~ 487 (792)
+++.+++.+++++++++|++++++|||+.... .....+-|++.+.+.-|++
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~kp 88 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEIYVGKP 88 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceEEeCCC
Confidence 67899999999999999999999999988653 3445566787666666664
No 166
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=93.88 E-value=0.21 Score=47.50 Aligned_cols=50 Identities=24% Similarity=0.296 Sum_probs=43.5
Q ss_pred EEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH---HhCC
Q 045750 428 VFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICH---EVGI 477 (792)
Q Consensus 428 ~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~---~~gi 477 (792)
.+-|.+..+|..-|++.+++++|++++.+|..+|....++-..+.+ ++|+
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 4569999999999999999999999999999999888887777665 4566
No 167
>PLN02645 phosphoglycolate phosphatase
Probab=93.79 E-value=0.16 Score=53.75 Aligned_cols=97 Identities=16% Similarity=0.081 Sum_probs=61.1
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCCCCccccchhhhccCHHHHHHhhhcceEEE
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKIC---HEVGIRTTHVSTGPDLELLSQESFHERVKRATVLA 507 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia---~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 507 (792)
|++--.+.+-|+++++|++|+++|++++++|++...+...++ +++|+... .+ .|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~------------~~---------~I~t 95 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVT------------EE---------EIFS 95 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCC------------hh---------hEee
Confidence 555556777899999999999999999999999977666666 56776421 00 0222
Q ss_pred EeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 508 RLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 508 ~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
.. ......++.....+++.|+ ++++..|...++.+++-+.-
T Consensus 96 s~--~~~~~~l~~~~~~~~~~V~-viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 96 SS--FAAAAYLKSINFPKDKKVY-VIGEEGILEELELAGFQYLG 136 (311)
T ss_pred hH--HHHHHHHHhhccCCCCEEE-EEcCHHHHHHHHHCCCEEec
Confidence 21 1122222222211214554 45556789999998876543
No 168
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=93.57 E-value=0.46 Score=48.08 Aligned_cols=82 Identities=21% Similarity=0.228 Sum_probs=55.9
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeC--
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKIC---HEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLT-- 510 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia---~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~-- 510 (792)
+.|.-|++.+..+.+++.|++++++|||....-.... ++.|..... .++-|..
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~----------------------~LiLR~~~D 200 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWE----------------------KLILKDPQD 200 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcc----------------------eeeecCCCC
Confidence 5678899999999999999999999999965332222 345664210 1222221
Q ss_pred ------hhhHHHHHHHHhhcCCCEEEEEcCCcccH
Q 045750 511 ------PTQKLRVVQSLQSVGKHVVGFLGDGINDS 539 (792)
Q Consensus 511 ------p~~K~~iv~~l~~~~~~~v~~iGDg~ND~ 539 (792)
.+.|...-+.+.+.|-++++.+||..+|.
T Consensus 201 ~~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 201 NSAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred CccchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 13355555666666657888999999996
No 169
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=93.49 E-value=0.18 Score=49.05 Aligned_cols=90 Identities=17% Similarity=0.123 Sum_probs=61.0
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 440 KDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 440 r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
-|+ .+.++.+++. ++..++|+.....+....+++|+.. +.++++.+... .+-.|+--...
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~----------------~KP~p~~~~~~ 151 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQH----------------HKPAPDTFLRC 151 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccC----------------CCCChHHHHHH
Confidence 344 6899999876 8999999999999999999999853 22222221110 11122333444
Q ss_pred HHHHhhcCCCEEEEEcCCcccHHHHHhCCee
Q 045750 518 VQSLQSVGKHVVGFLGDGINDSLALDAANVG 548 (792)
Q Consensus 518 v~~l~~~~~~~v~~iGDg~ND~~~l~~A~vg 548 (792)
.+.++... ..+++|||+.+|+.+-++||+-
T Consensus 152 ~~~~~~~~-~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 152 AQLMGVQP-TQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHcCCCH-HHeEEEeccHhhHHHHHHCCCE
Confidence 44444444 5688999999999999999984
No 170
>PLN02151 trehalose-phosphatase
Probab=93.28 E-value=1.5 Score=46.54 Aligned_cols=63 Identities=21% Similarity=0.181 Sum_probs=43.2
Q ss_pred hHHHHHHHHhhcCC------CEEEEEcCCcccHHHHHhC-----CeeEEecCCcHHHHhhcCEEeccCCchHHHHHHH
Q 045750 513 QKLRVVQSLQSVGK------HVVGFLGDGINDSLALDAA-----NVGISVDSGASVAKDLADIILLEKDLNVLVAGVE 579 (792)
Q Consensus 513 ~K~~iv~~l~~~~~------~~v~~iGDg~ND~~~l~~A-----~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~ 579 (792)
+|...++.+.+.-+ ..++++||...|-.||+.. |+||.++.+.. .-.|++.+ ++...+.+.++
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L--~dp~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSL--QEPDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeC--CCHHHHHHHHH
Confidence 67777777665410 2478999999999999853 67777774322 22588888 55667766664
No 171
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=92.88 E-value=0.22 Score=48.23 Aligned_cols=96 Identities=15% Similarity=0.143 Sum_probs=62.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.+++.+++++|+ .+++++|+.+...+....+++|+.. +.++.+.+...- ..+.+-.|+-=.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~------------~~~~KP~p~~~~ 148 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPD------------YLLPKPSPQAYE 148 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCc------------cCCCCCCHHHHH
Confidence 47789999999998 4799999999999999999999843 111111111000 000011122223
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeE
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAANVGI 549 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgi 549 (792)
.+++.+.... ..+++|||...|+.+-++||+..
T Consensus 149 ~~~~~~~~~~-~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 149 KALREAGVDP-ERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHhCCCc-cceEEEeCCHHHHHHHHHcCCEE
Confidence 4444444444 67889999999999999998854
No 172
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=91.69 E-value=0.59 Score=46.78 Aligned_cols=99 Identities=15% Similarity=0.126 Sum_probs=75.1
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
..++.|++.+.++.|+++|+.+.+.|+.....+..+.+.+|+.. ..++++.+... .+=.|+-
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~----------------~KP~Pd~ 147 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVAR----------------GKPAPDI 147 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhc----------------CCCCCHH
Confidence 35789999999999999999999999999999999999999853 23333333322 1223555
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
=....+.|.-.. ..++++.|+.|.+.+-++||.-+-.
T Consensus 148 yL~Aa~~Lgv~P-~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 148 YLLAAERLGVDP-EECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred HHHHHHHcCCCh-HHeEEEecchhHHHHHHHCCCEEEE
Confidence 555566655455 7788999999999999999985443
No 173
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=90.64 E-value=0.51 Score=43.62 Aligned_cols=90 Identities=22% Similarity=0.300 Sum_probs=63.4
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChh-h
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLS----LAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPT-Q 513 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~----~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~-~ 513 (792)
|++-+++.|..-+++|=.++.+|||.+. .++.+|+.+.|..- ..++|+...|. .
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m---------------------~pv~f~Gdk~k~~ 173 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM---------------------NPVIFAGDKPKPG 173 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC---------------------cceeeccCCCCcc
Confidence 4566889999999999999999999875 44556666666431 12355554441 2
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEe
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISV 551 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~ 551 (792)
+..-...+|+++ .-..-||+.||+.+-+.|++ ||-+
T Consensus 174 qy~Kt~~i~~~~--~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 174 QYTKTQWIQDKN--IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred cccccHHHHhcC--ceEEecCCchhhhHHHhcCccceeE
Confidence 233345566666 34578999999999999998 7765
No 174
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=90.30 E-value=0.55 Score=48.09 Aligned_cols=50 Identities=14% Similarity=0.136 Sum_probs=43.0
Q ss_pred CC-hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--Cccccchhh
Q 045750 439 PK-DSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDL 488 (792)
Q Consensus 439 ~r-~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~ 488 (792)
+| |++.+++++|+++|+++.++|+.....+....+++|+.. +.++++.+.
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHK 198 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcc
Confidence 56 999999999999999999999999999999999999974 345555444
No 175
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=89.84 E-value=2.2 Score=43.07 Aligned_cols=61 Identities=26% Similarity=0.206 Sum_probs=30.4
Q ss_pred EeChhhHHHHHHHHhhcCC------CEEEEEcCCcccHHHHHhC------CeeEEecCCc-HHHHhhcCEEecc
Q 045750 508 RLTPTQKLRVVQSLQSVGK------HVVGFLGDGINDSLALDAA------NVGISVDSGA-SVAKDLADIILLE 568 (792)
Q Consensus 508 ~~~p~~K~~iv~~l~~~~~------~~v~~iGDg~ND~~~l~~A------~vgia~~~~~-~~~~~~ad~vl~~ 568 (792)
+..-..|...++.+-+... ..++++||...|-.|++.. +++|-++..+ ..-...|++-+.+
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 3333458888887777642 2689999999999999773 5677777443 3334456665543
No 176
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=89.75 E-value=1.7 Score=48.84 Aligned_cols=98 Identities=16% Similarity=0.110 Sum_probs=63.4
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-hCCCCCccccchhhhccCHHHHHHhhhcceEEEE------eCh
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHE-VGIRTTHVSTGPDLELLSQESFHERVKRATVLAR------LTP 511 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~-~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~------~~p 511 (792)
+++++.+.+ ++.|.+ +++|+-...-++.+|++ +|++. ++ |.+++...+ -..-.+ +.-
T Consensus 111 l~~~a~~~~---~~~g~~-vvVSASp~~~Vepfa~~~LGid~--VI-gTeLev~~~---------G~~TG~i~g~~~c~G 174 (497)
T PLN02177 111 VHPETWRVF---NSFGKR-YIITASPRIMVEPFVKTFLGADK--VL-GTELEVSKS---------GRATGFMKKPGVLVG 174 (497)
T ss_pred cCHHHHHHH---HhCCCE-EEEECCcHHHHHHHHHHcCCCCE--EE-ecccEECcC---------CEEeeeecCCCCCcc
Confidence 667755544 567754 99999999999999987 89963 11 222211000 001111 234
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecC
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVDS 553 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~ 553 (792)
++|.+-++...... ....+.||+.||.+||+.|+-+.+++.
T Consensus 175 e~Kv~rl~~~~g~~-~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 175 DHKRDAVLKEFGDA-LPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred HHHHHHHHHHhCCC-CceEEEECCccHHHHHHhCCccEEeCC
Confidence 56777776433222 223689999999999999999999975
No 177
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=88.57 E-value=70 Score=39.33 Aligned_cols=78 Identities=9% Similarity=0.052 Sum_probs=49.4
Q ss_pred hHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC-eEE
Q 045750 7 ISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH-LVV 85 (792)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~-~~V 85 (792)
+..+-..+.-+...|+.+.++++......- .+|.|||+.. .-|....+...|.+|-|.++++.++ +-+
T Consensus 131 iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~----a~ViR~g~~~-------~~g~~~~I~~~eLvpGDiV~l~~Gd~IPa 199 (902)
T PRK10517 131 MVAISTLLNFIQEARSTKAADALKAMVSNT----ATVLRVINDK-------GENGWLEIPIDQLVPGDIIKLAAGDMIPA 199 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCe----EEEEECCccC-------CCCeEEEEEHHhCCCCCEEEECCCCEEee
Confidence 344444555566667777888775433222 2344554321 1267889999999999999998655 556
Q ss_pred EeccccCCCc
Q 045750 86 SQSSLTGESW 95 (792)
Q Consensus 86 des~ltGEs~ 95 (792)
|=-.+.|+..
T Consensus 200 Dg~li~g~~l 209 (902)
T PRK10517 200 DLRILQARDL 209 (902)
T ss_pred eEEEEEcCce
Confidence 7666777653
No 178
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=88.36 E-value=1.1 Score=45.34 Aligned_cols=89 Identities=16% Similarity=0.076 Sum_probs=53.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChh--h
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPT--Q 513 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~--~ 513 (792)
++-|++.+++++|++. +++.++|..+.. .+..|+.. +.++.+.+. .+..|. -
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~------------------~~~KP~p~~ 168 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPH------------------GRSKPFSDM 168 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccC------------------CcCCCcHHH
Confidence 4668999999999975 899999986654 25566632 011111100 011121 1
Q ss_pred HHHHHHHHhhcCCCEEEEEcCC-cccHHHHHhCCeeEEe
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDG-INDSLALDAANVGISV 551 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg-~ND~~~l~~A~vgia~ 551 (792)
=....+.+.-.. ..+++|||+ ..|+.+-++||+-...
T Consensus 169 ~~~a~~~~~~~~-~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 169 YHLAAEKLNVPI-GEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHcCCCh-hHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 122223333223 678999999 5999999999986543
No 179
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=88.27 E-value=0.36 Score=45.58 Aligned_cols=96 Identities=15% Similarity=0.036 Sum_probs=62.1
Q ss_pred ccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEe-Chh
Q 045750 434 TFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARL-TPT 512 (792)
Q Consensus 434 ~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-~p~ 512 (792)
.+.=..||++.+.+++|.+. +++++.|......|..+.+.++..... ++. +++|- ...
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~-f~~-------------------~l~r~~~~~ 96 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKV-ISR-------------------RLYRESCVF 96 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCE-EeE-------------------EEEccccEE
Confidence 33446799999999999988 999999999999999999999875311 000 11111 000
Q ss_pred hHHHHHHHHhhcC--CCEEEEEcCCcccHHHHHhCCeeEE
Q 045750 513 QKLRVVQSLQSVG--KHVVGFLGDGINDSLALDAANVGIS 550 (792)
Q Consensus 513 ~K~~iv~~l~~~~--~~~v~~iGDg~ND~~~l~~A~vgia 550 (792)
.+..+++.+...| ...|+++||...|..+-+.+++-+.
T Consensus 97 ~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 97 TNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred eCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 1111333333222 2578899999988877555554433
No 180
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=88.01 E-value=76 Score=39.06 Aligned_cols=75 Identities=8% Similarity=0.038 Sum_probs=45.5
Q ss_pred HHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC-eEEEec
Q 045750 10 CLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH-LVVSQS 88 (792)
Q Consensus 10 ~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~-~~Vdes 88 (792)
+...+.-+...++-+.++++..... ...+|.|||+. -.-|....+...|.+|.|.++++.++ +-+|=-
T Consensus 123 l~~~i~~~qe~~a~~a~~~L~~l~~----~~~~V~Rdg~~-------~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~ 191 (903)
T PRK15122 123 LSGLLRFWQEFRSNKAAEALKAMVR----TTATVLRRGHA-------GAEPVRREIPMRELVPGDIVHLSAGDMIPADVR 191 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccC----CceEEEECCcc-------CCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEE
Confidence 3344455555666677777643221 11223333320 11267889999999999999998655 556766
Q ss_pred cccCCCc
Q 045750 89 SLTGESW 95 (792)
Q Consensus 89 ~ltGEs~ 95 (792)
.+.|++.
T Consensus 192 li~g~~l 198 (903)
T PRK15122 192 LIESRDL 198 (903)
T ss_pred EEEcCce
Confidence 6766653
No 181
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=85.86 E-value=4.4 Score=40.47 Aligned_cols=120 Identities=23% Similarity=0.230 Sum_probs=72.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
-++-|++.++++++++. ++++++|.-.........+++|+... .++... -.....|+ +
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~------------------~~g~~KP~-~ 157 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISE------------------DVGVAKPD-P 157 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEec------------------ccccCCCC-c
Confidence 36678999999999999 99999999988899999999998431 111100 01112232 2
Q ss_pred HHHHHHHhhcC--CCEEEEEcCC-cccHHHHHhCCe-eEEecCCcH---HHHhhcCEEeccCCchHHHHHH
Q 045750 515 LRVVQSLQSVG--KHVVGFLGDG-INDSLALDAANV-GISVDSGAS---VAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 515 ~~iv~~l~~~~--~~~v~~iGDg-~ND~~~l~~A~v-gia~~~~~~---~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.-.-..+++.| .+.+++|||+ .||+..-+++|. +|-+..... ......|+.+ .++..+...+
T Consensus 158 ~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i--~~l~~l~~~~ 226 (229)
T COG1011 158 EIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEI--SSLAELLDLL 226 (229)
T ss_pred HHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEE--cCHHHHHHHH
Confidence 22333333332 2689999997 577566678887 444442211 1114455555 3455555444
No 182
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=85.55 E-value=0.71 Score=46.14 Aligned_cols=130 Identities=12% Similarity=0.145 Sum_probs=70.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhhhcceEEEEe----C
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERVKRATVLARL----T 510 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~~~~----~ 510 (792)
-.+|+++.+.++.|++.+|.+.++|+-=......+-++-|.... .++++. ...+++. .+.+=. .
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~--M~Fd~~g--------~l~gF~~~lIH 158 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNF--MDFDEDG--------VLVGFKGPLIH 158 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE---EEE-TTS--------BEEEE-SS---
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeee--EEECCcc--------eEeecCCCceE
Confidence 46899999999999999999999999999998888888876321 111110 0000000 000000 1
Q ss_pred hhhHHH-------HHHHHhhcCCCEEEEEcCCcccHHHHHhC---CeeEEec--CCc-----HHHHhhcCEEeccCCchH
Q 045750 511 PTQKLR-------VVQSLQSVGKHVVGFLGDGINDSLALDAA---NVGISVD--SGA-----SVAKDLADIILLEKDLNV 573 (792)
Q Consensus 511 p~~K~~-------iv~~l~~~~~~~v~~iGDg~ND~~~l~~A---~vgia~~--~~~-----~~~~~~ad~vl~~~~~~~ 573 (792)
+-.|.+ ..+.++.+ ..|+..||+.-|+.|-.-. +.-+.+| |.. +.-+++=|+|+.+|.--.
T Consensus 159 ~~NKn~~~l~~~~~~~~~~~R--~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~ 236 (246)
T PF05822_consen 159 TFNKNESALEDSPYFKQLKKR--TNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMD 236 (246)
T ss_dssp TT-HHHHHHTTHHHHHCTTT----EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-H
T ss_pred EeeCCcccccCchHHHHhccC--CcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCch
Confidence 112222 12233333 5799999999999996544 4444455 433 234557799999887555
Q ss_pred HHHHH
Q 045750 574 LVAGV 578 (792)
Q Consensus 574 i~~~i 578 (792)
++..|
T Consensus 237 v~~~i 241 (246)
T PF05822_consen 237 VPNAI 241 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 183
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=85.48 E-value=4.6 Score=42.04 Aligned_cols=92 Identities=21% Similarity=0.263 Sum_probs=57.2
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH---HHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEE
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIK---ICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLA 507 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~---ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~ 507 (792)
|++.-.+.+-|++.++|++|+++|++++++|++...+... -.+++|+.... ..++
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~---------------------~~i~- 68 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLA---------------------EQLF- 68 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCh---------------------hhEe-
Confidence 4444467788899999999999999999999976543333 34567774210 0022
Q ss_pred EeChhhHHHHHHHHhh---cCCCEEEEEcCCcccHHHHHhCCeeEE
Q 045750 508 RLTPTQKLRVVQSLQS---VGKHVVGFLGDGINDSLALDAANVGIS 550 (792)
Q Consensus 508 ~~~p~~K~~iv~~l~~---~~~~~v~~iGDg~ND~~~l~~A~vgia 550 (792)
++. ....+.+++ .+ ..|.++|+. .....++.+++-+.
T Consensus 69 --ts~--~~~~~~l~~~~~~~-~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 69 --SSA--LCAARLLRQPPDAP-KAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred --cHH--HHHHHHHHhhCcCC-CEEEEEcCH-HHHHHHHHCCCEEe
Confidence 111 122233444 23 678889975 34566777776654
No 184
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=84.57 E-value=1.8 Score=44.50 Aligned_cols=41 Identities=12% Similarity=0.075 Sum_probs=37.8
Q ss_pred CC-hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 045750 439 PK-DSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT 479 (792)
Q Consensus 439 ~r-~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~ 479 (792)
+| |++.+++++|+++|+++.++|+.+...+....+.+|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 45 999999999999999999999888889999999999964
No 185
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=83.27 E-value=6.3 Score=38.86 Aligned_cols=86 Identities=15% Similarity=0.097 Sum_probs=56.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHH----HHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSL----AIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~----a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
.+-||+.+.++...+.|.++..+|.|..+. +..=.++.|++... ... +...-....
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~-------------------~~~-~llkk~~k~ 181 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVL-------------------ESH-LLLKKDKKS 181 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccc-------------------ccc-eEEeeCCCc
Confidence 456899999999999999999999999876 34445666775311 111 222222233
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHh
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDA 544 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~ 544 (792)
|..=.+.+++.. ..|+.+||..+|......
T Consensus 182 Ke~R~~~v~k~~-~iVm~vGDNl~DF~d~~~ 211 (274)
T COG2503 182 KEVRRQAVEKDY-KIVMLVGDNLDDFGDNAY 211 (274)
T ss_pred HHHHHHHHhhcc-ceeeEecCchhhhcchhh
Confidence 443344444444 899999999999766543
No 186
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=83.07 E-value=8.8 Score=39.22 Aligned_cols=128 Identities=22% Similarity=0.182 Sum_probs=78.9
Q ss_pred cccCCCCChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCCC----CC---ccccchhhhccCHHH---------
Q 045750 433 ITFYDPPKDSAKQALWRLAKK-GVKAKLLTGDSLSLAIKICHEVGIR----TT---HVSTGPDLELLSQES--------- 495 (792)
Q Consensus 433 i~~~d~~r~~~~~~I~~l~~~-Gi~v~~~Tgd~~~~a~~ia~~~gi~----~~---~~~~g~~~~~~~~~~--------- 495 (792)
--....+-++..+.+++|... ..-++++|||..........-.|+. ++ ..++|.......++.
T Consensus 35 ~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~ 114 (266)
T COG1877 35 HPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVA 114 (266)
T ss_pred CccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHH
Confidence 344567888999999999988 4469999999999998887755551 00 122332211111110
Q ss_pred --HHHhh------------------------------------------------hcceEEEEeChhhHHHHHHHHhhc-
Q 045750 496 --FHERV------------------------------------------------KRATVLARLTPTQKLRVVQSLQSV- 524 (792)
Q Consensus 496 --~~~~~------------------------------------------------~~~~v~~~~~p~~K~~iv~~l~~~- 524 (792)
++..+ .+..|-.|-+-..|...++.+.+.
T Consensus 115 ~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~ 194 (266)
T COG1877 115 AILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL 194 (266)
T ss_pred HHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC
Confidence 00000 023345555556799998865554
Q ss_pred CC--CEEEEEcCCcccHHHHHhCC----eeEEecCCcHHHHh
Q 045750 525 GK--HVVGFLGDGINDSLALDAAN----VGISVDSGASVAKD 560 (792)
Q Consensus 525 ~~--~~v~~iGDg~ND~~~l~~A~----vgia~~~~~~~~~~ 560 (792)
+. ..+++.||...|-.||+..+ .+|-++.++..++.
T Consensus 195 ~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~t~a~~ 236 (266)
T COG1877 195 PFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGSTQAKF 236 (266)
T ss_pred CCCCCcceecCCCCccHHHHHhhccCCCceEEecCCcccccc
Confidence 21 35889999999999999887 34445544333333
No 187
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=82.81 E-value=2 Score=48.48 Aligned_cols=40 Identities=18% Similarity=0.165 Sum_probs=33.5
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCH------------HHHHHHHHHhCCC
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSL------------SLAIKICHEVGIR 478 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~------------~~a~~ia~~~gi~ 478 (792)
+-|++.+++++|+++|++++++|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999998665 3466777788775
No 188
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=81.79 E-value=1.5 Score=41.87 Aligned_cols=84 Identities=13% Similarity=0.069 Sum_probs=54.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhhHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQKL 515 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 515 (792)
++.|++.++++ ++.++|+-+........+++|+.. +.++++++... .+-.|+-=.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~----------------~KP~p~~f~ 146 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRA----------------YKPDPVVYE 146 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCC----------------CCCCHHHHH
Confidence 57889999998 378999999999998999999853 11222221100 111222224
Q ss_pred HHHHHHhhcCCCEEEEEcCCcccHHHHHhC
Q 045750 516 RVVQSLQSVGKHVVGFLGDGINDSLALDAA 545 (792)
Q Consensus 516 ~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A 545 (792)
...+.+.-.. ..+++|||+..|+.+-+++
T Consensus 147 ~~~~~~~~~p-~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 147 LVFDTVGLPP-DRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHCCCH-HHeEeEecChhhHHHHhcC
Confidence 4445554444 6789999999998876543
No 189
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=79.23 E-value=1.4e+02 Score=36.77 Aligned_cols=204 Identities=15% Similarity=0.082 Sum_probs=102.4
Q ss_pred hHhHHHHHHHHhHHHHHHHHhccCC-----CCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC
Q 045750 7 ISVCLRFYQEYGSSKAAMKLSEFVR-----CPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK 81 (792)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~ 81 (792)
+...+.-++..+.-+++.++..... .+...+. . ..+.-|....+...|.+|-|.+.++..+ .=+|=-.+.|+
T Consensus 95 ~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~-~-~eLv~GDiv~l~~Gd~IPaDg~ii~g~~-l~VDES~LTGE 171 (884)
T TIGR01522 95 TVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVL-A-STLVPGDLVCLSVGDRVPADLRIVEAVD-LSIDESNLTGE 171 (884)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEE-H-HHCccCCEEEecCCCEEeeeEEEEEcCc-eEEEcccccCC
Confidence 3444455566777777776643311 1111111 1 2222688999999999999999998543 33666667776
Q ss_pred CeEEEeccc--cCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEEEEEEeeccccHHHHHHhhhcCCCC-CChH
Q 045750 82 HLVVSQSSL--TGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGTGLVVSTGSKTYTSTMFSTIGKQKP-PDDF 158 (792)
Q Consensus 82 ~~~Vdes~l--tGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~~~V~~tG~~t~~~~~~~~~~~~~~-~~~~ 158 (792)
+.-|+=..- .++.. . ...+..+.+-....+-.|.-..--...|.-+..|.=. ..+.+....+.+ ...+
T Consensus 172 S~pv~K~~~~~~~~~~---~----~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~--~~v~~~~~~kt~lq~~l 242 (884)
T TIGR01522 172 TTPVSKVTAPIPAATN---G----DLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVF--KMMQAIEKPKTPLQKSM 242 (884)
T ss_pred Ccceeccccccccccc---c----cccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHH--HHhccCCCCCCcHHHHH
Confidence 644433221 11110 0 0011122233345566776544333444444555422 112222222222 2235
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 045750 159 EKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLAKGA 222 (792)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~ 222 (792)
++..+.+....+.+++++.++.++....+...+..++...++..=...|.++++++..+.....
T Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~a 306 (884)
T TIGR01522 243 DLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMS 306 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHh
Confidence 5555555544433333333333333322334445556666666667778888888777765543
No 190
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=78.73 E-value=9.6 Score=36.39 Aligned_cols=99 Identities=19% Similarity=0.216 Sum_probs=59.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhh-----cceEEEEeChh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVK-----RATVLARLTPT 512 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~-----~~~v~~~~~p~ 512 (792)
.+.|++.+++..++++|++++|+|.-. |+.. .-.+++.+...++.....+.. ....+|...|+
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~r-gyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~ 98 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGR-GYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPE 98 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCC-----------Cccc-cCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCC
Confidence 357899999999999999999999743 3321 122333333322211111111 12234444444
Q ss_pred --------hHHHHHHHHhhcC--CCEEEEEcCCcccHHHHHhCCee
Q 045750 513 --------QKLRVVQSLQSVG--KHVVGFLGDGINDSLALDAANVG 548 (792)
Q Consensus 513 --------~K~~iv~~l~~~~--~~~v~~iGDg~ND~~~l~~A~vg 548 (792)
....+.+.+++.+ .....+|||...|+.+-..|+++
T Consensus 99 ~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 99 DNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 2344455555432 15677999999999999999887
No 191
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=77.78 E-value=3.9 Score=32.75 Aligned_cols=51 Identities=22% Similarity=0.200 Sum_probs=34.6
Q ss_pred HHHHHHHhhcCCCEEEEEcCC-cccHHHHHhCCe-eEEecCC---cHHH---HhhcCEEe
Q 045750 515 LRVVQSLQSVGKHVVGFLGDG-INDSLALDAANV-GISVDSG---ASVA---KDLADIIL 566 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg-~ND~~~l~~A~v-gia~~~~---~~~~---~~~ad~vl 566 (792)
..+.+.+.... ..++||||. ..|+.+-+++++ +|.+..| .+.. ...+|+|+
T Consensus 11 ~~a~~~~~~~~-~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv 69 (75)
T PF13242_consen 11 EQALKRLGVDP-SRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVV 69 (75)
T ss_dssp HHHHHHHTSGG-GGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEE
T ss_pred HHHHHHcCCCH-HHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEE
Confidence 44455554444 678899999 999999999999 4555322 2222 25788887
No 192
>PTZ00445 p36-lilke protein; Provisional
Probab=77.35 E-value=14 Score=36.08 Aligned_cols=142 Identities=16% Similarity=0.141 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEE------------ecccCCCCChhHHHHHHHH
Q 045750 383 QKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLG------------LITFYDPPKDSAKQALWRL 450 (792)
Q Consensus 383 ~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG------------~i~~~d~~r~~~~~~I~~l 450 (792)
.+......+.+.+.|.+++++=... ++++ ...+--.++|+.++.+++|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn--------------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l 87 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL--------------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRL 87 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh--------------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHH
Confidence 3445566678889999998764321 2221 1112234799999999999
Q ss_pred HhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeC------------------hh
Q 045750 451 AKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLT------------------PT 512 (792)
Q Consensus 451 ~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~------------------p~ 512 (792)
+++||++.++|=..... +-. + .....++|.++.....+.-....+-..++|... |+
T Consensus 88 ~~~~I~v~VVTfSd~~~---~~~--~-~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~ 161 (219)
T PTZ00445 88 KNSNIKISVVTFSDKEL---IPS--E-NRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPL 161 (219)
T ss_pred HHCCCeEEEEEccchhh---ccc--c-CCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCcc
Confidence 99999999999776654 100 1 234456666654332221111111122343322 22
Q ss_pred hH----HHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe-eEEe
Q 045750 513 QK----LRVVQSLQSVGKHVVGFLGDGINDSLALDAANV-GISV 551 (792)
Q Consensus 513 ~K----~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v-gia~ 551 (792)
-| .++.+...-.. +.++++-|....+.+-++.|+ ++-+
T Consensus 162 iK~yHle~ll~~~gl~p-eE~LFIDD~~~NVeaA~~lGi~ai~f 204 (219)
T PTZ00445 162 DKSYHLKQVCSDFNVNP-DEILFIDDDMNNCKNALKEGYIALHV 204 (219)
T ss_pred chHHHHHHHHHHcCCCH-HHeEeecCCHHHHHHHHHCCCEEEEc
Confidence 22 12233322233 678999999999999888777 4444
No 193
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=75.46 E-value=60 Score=31.91 Aligned_cols=9 Identities=11% Similarity=0.231 Sum_probs=3.7
Q ss_pred HHHHHHHHH
Q 045750 768 LLFIGYFTV 776 (792)
Q Consensus 768 ~~~~~~l~~ 776 (792)
+++++.+.+
T Consensus 185 iig~i~~~~ 193 (206)
T PF06570_consen 185 IIGVIAFAL 193 (206)
T ss_pred HHHHHHHHH
Confidence 444444444
No 194
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=74.13 E-value=11 Score=40.16 Aligned_cols=104 Identities=21% Similarity=0.184 Sum_probs=65.8
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh-C-------CCC--Cccccchh----------hhccCHH----H
Q 045750 440 KDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEV-G-------IRT--THVSTGPD----------LELLSQE----S 495 (792)
Q Consensus 440 r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~-g-------i~~--~~~~~g~~----------~~~~~~~----~ 495 (792)
-|++.+.+++|+++|+++.++|+-....+..+.+.+ | +.. +.++.+.. +...+.+ .
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~ 265 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLK 265 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCccc
Confidence 679999999999999999999999999999999996 6 321 22232221 1111110 0
Q ss_pred HHHh--hhcceEEEEeChhhHHHHHHHHhhcCCCEEEEEcCCc-ccHHHHH-hCCe
Q 045750 496 FHER--VKRATVLARLTPTQKLRVVQSLQSVGKHVVGFLGDGI-NDSLALD-AANV 547 (792)
Q Consensus 496 ~~~~--~~~~~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~-ND~~~l~-~A~v 547 (792)
+... +.+..+++.-+- ..+.+.+...+ ..|++|||.. .|+-.-+ .++.
T Consensus 266 ~~~~~~l~~g~vY~gGn~---~~~~~~l~~~~-~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 266 WGEVDGLEPGKVYSGGSL---KQFHELLKWRG-KEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred CCccccccCCCeEeCCCH---HHHHHHHCCCC-CcEEEECCcchHHHHhhHHhcCc
Confidence 0000 122234443333 34555556667 8899999984 6877665 6665
No 195
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=73.18 E-value=62 Score=39.16 Aligned_cols=39 Identities=18% Similarity=0.113 Sum_probs=32.7
Q ss_pred CChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCC
Q 045750 439 PKDSAKQALWRLAKK-GVKAKLLTGDSLSLAIKICHEVGI 477 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~-Gi~v~~~Tgd~~~~a~~ia~~~gi 477 (792)
+.|+..+++++|.+. +-.|+++|||............++
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l 572 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNI 572 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCC
Confidence 677899999999865 788999999999999888765444
No 196
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=72.26 E-value=2.3e+02 Score=34.22 Aligned_cols=193 Identities=16% Similarity=0.147 Sum_probs=88.9
Q ss_pred HhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC-eEEE
Q 045750 8 SVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH-LVVS 86 (792)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~-~~Vd 86 (792)
..+...+.-+...++-+.++++..... ....+ ++-|....+...|.+|-|.+++...+ +-+|
T Consensus 65 ~~i~~~i~~~qe~~a~~~~~~L~~~~~-------------~~~~V----~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD 127 (755)
T TIGR01647 65 LLLNATIGFIEENKAGNAVEALKQSLA-------------PKARV----LRDGKWQEIPASELVPGDVVRLKIGDIVPAD 127 (755)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCC-------------CeEEE----EECCEEEEEEhhhCcCCCEEEECCCCEEece
Confidence 333344455555566667776632211 11122 23478889999999999999998554 5566
Q ss_pred eccccCCCcccccccccccCCCCCCCcccceEeeccEEeeeeEE--EEEEeeccccHHHHHHhhhcC-CCCCChHHHHHH
Q 045750 87 QSSLTGESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSGT--GLVVSTGSKTYTSTMFSTIGK-QKPPDDFEKGVR 163 (792)
Q Consensus 87 es~ltGEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~~--~~V~~tG~~t~~~~~~~~~~~-~~~~~~~~~~~~ 163 (792)
--.+.|+..-+.-..- +.+..|. .-..|..+..|+.. |.....-..|-.......+.+ -....+-....+
T Consensus 128 g~vi~g~~~~VDeS~L--TGES~PV-----~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq 200 (755)
T TIGR01647 128 CRLFEGDYIQVDQAAL--TGESLPV-----TKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQ 200 (755)
T ss_pred EEEEecCceEEEcccc--cCCccce-----EeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHH
Confidence 6666666322222111 0011110 12457778877732 222222222211111111111 111211111233
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccccc-hhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Q 045750 164 RISFVLICVMLIVATIIILIDYFTSKN-LSESILFGISVACALTPQMFPLIVNTSLAKGALA 224 (792)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~ 224 (792)
+....+....+.++++...+.+..... ....+..++...+...-.+.|.+++++...+...
T Consensus 201 ~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~ 262 (755)
T TIGR01647 201 KILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAV 262 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHH
Confidence 333333333333333333222222111 1233444555556666666777777776666543
No 197
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=71.33 E-value=4.5 Score=41.39 Aligned_cols=95 Identities=18% Similarity=0.192 Sum_probs=62.6
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh----CCCCCccccchhhhccCHHHHHHhhhcceEE
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEV----GIRTTHVSTGPDLELLSQESFHERVKRATVL 506 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~----gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 506 (792)
|++.-...+=|++.++|++|+++|++++.+|..+..+...+++++ |++.. .+ .++
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~------------~~---------~i~ 75 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVT------------PD---------DIV 75 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCC------------HH---------Hee
Confidence 777888999999999999999999999999999888777555544 22110 00 011
Q ss_pred EEeChhhHHHHHHHHhhcC-CCEEEEEcCCcccHHHHHhCCeeEEec
Q 045750 507 ARLTPTQKLRVVQSLQSVG-KHVVGFLGDGINDSLALDAANVGISVD 552 (792)
Q Consensus 507 ~~~~p~~K~~iv~~l~~~~-~~~v~~iGDg~ND~~~l~~A~vgia~~ 552 (792)
. +. ....+.++++. ..+|.++|. ..+...++.+|+-+.-.
T Consensus 76 T---S~--~at~~~l~~~~~~~kv~viG~-~~l~~~l~~~G~~~~~~ 116 (269)
T COG0647 76 T---SG--DATADYLAKQKPGKKVYVIGE-EGLKEELEGAGFELVDE 116 (269)
T ss_pred c---HH--HHHHHHHHhhCCCCEEEEECC-cchHHHHHhCCcEEecc
Confidence 1 11 11223333322 157888885 35667888888776664
No 198
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=70.31 E-value=22 Score=37.04 Aligned_cols=132 Identities=21% Similarity=0.254 Sum_probs=71.4
Q ss_pred cCCCCChhHHHHHHHHHhCCCe---EEEEcCCCHHHHH------HHHHHhCCCCCcc-----------------------
Q 045750 435 FYDPPKDSAKQALWRLAKKGVK---AKLLTGDSLSLAI------KICHEVGIRTTHV----------------------- 482 (792)
Q Consensus 435 ~~d~~r~~~~~~I~~l~~~Gi~---v~~~Tgd~~~~a~------~ia~~~gi~~~~~----------------------- 482 (792)
+.++++++.++.++++++.|++ .++.-||++.+.. ..|+++|+.....
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 4567788888888888887776 3556677765543 3567778832111
Q ss_pred ccch----hh-hccCHHHHH------------------HhhhcceEEEEeChhhHHHHHHHHhh--cCCCEEEEEcCC-c
Q 045750 483 STGP----DL-ELLSQESFH------------------ERVKRATVLARLTPTQKLRVVQSLQS--VGKHVVGFLGDG-I 536 (792)
Q Consensus 483 ~~g~----~~-~~~~~~~~~------------------~~~~~~~v~~~~~p~~K~~iv~~l~~--~~~~~v~~iGDg-~ 536 (792)
++|- ++ ..++++.+. .....-.-|.-|||..-.++++...- .| +.++++|-| .
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~G-k~V~vIG~s~i 170 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTG-KHAVVIGRSNI 170 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCC-CEEEEECCCCc
Confidence 1110 00 011122111 11111223445566555555554432 25 889999997 4
Q ss_pred ccHH---HHHhCCeeEEec-C---CcHHHHhhcCEEec
Q 045750 537 NDSL---ALDAANVGISVD-S---GASVAKDLADIILL 567 (792)
Q Consensus 537 ND~~---~l~~A~vgia~~-~---~~~~~~~~ad~vl~ 567 (792)
-=.| +|.++|..+.+- + .....-..||+|+.
T Consensus 171 vG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIs 208 (301)
T PRK14194 171 VGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVA 208 (301)
T ss_pred cHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 4433 567777777663 2 12334456898875
No 199
>PLN03190 aminophospholipid translocase; Provisional
Probab=68.45 E-value=59 Score=41.14 Aligned_cols=65 Identities=12% Similarity=0.186 Sum_probs=45.1
Q ss_pred EEEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECC
Q 045750 3 ALVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEP 67 (792)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~ 67 (792)
++..+...++.++.+++++..+.-.......-...+.+-+.++-|..+.+...|.+|-|.+.+..
T Consensus 148 ~v~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~S 212 (1178)
T PLN03190 148 LVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLST 212 (1178)
T ss_pred HHHHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEec
Confidence 34456778899999999988875444422221222222233447899999999999999999974
No 200
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=66.72 E-value=29 Score=36.84 Aligned_cols=48 Identities=25% Similarity=0.299 Sum_probs=39.1
Q ss_pred EecccCCCCChhHHHHHHHHHhC----CCeEEEEcCCC---HHH-HHHHHHHhCCC
Q 045750 431 GLITFYDPPKDSAKQALWRLAKK----GVKAKLLTGDS---LSL-AIKICHEVGIR 478 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~----Gi~v~~~Tgd~---~~~-a~~ia~~~gi~ 478 (792)
|++.-.+++-|++.++++.|++. |+++..+|... ... +..+.+++|++
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 66777889999999999999999 99999999665 343 55566888875
No 201
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=65.62 E-value=6.7 Score=39.79 Aligned_cols=97 Identities=9% Similarity=0.092 Sum_probs=52.3
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHH
Q 045750 440 KDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQ 519 (792)
Q Consensus 440 r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~ 519 (792)
-++..++++.++++|++. ++|+.....+.......|... -.. .+...-.+.....+=+|+--....+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~-------~~~-----~i~~~g~~~~~~gKP~~~~~~~~~~ 206 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGY-------YAE-----LIKQLGGKVIYSGKPYPAIFHKALK 206 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccH-------HHH-----HHHHhCCcEecCCCCCHHHHHHHHH
Confidence 478999999999999997 778766544433322222210 000 0000000111111222222233344
Q ss_pred HHhhcCCCEEEEEcCC-cccHHHHHhCCeeE
Q 045750 520 SLQSVGKHVVGFLGDG-INDSLALDAANVGI 549 (792)
Q Consensus 520 ~l~~~~~~~v~~iGDg-~ND~~~l~~A~vgi 549 (792)
.+.....+.++||||+ .+|+.+=++|++..
T Consensus 207 ~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 207 ECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 4432222579999999 69999999998853
No 202
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=63.69 E-value=31 Score=32.69 Aligned_cols=99 Identities=15% Similarity=0.182 Sum_probs=57.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLT-GDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLR 516 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~T-gd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 516 (792)
.+-|++++.++.|++.|+++.++| -+.+.-|+.+-+.+++.... ..+..+ .+.--+....|..|..
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~-~~~~~~------------~~~F~~~eI~~gsK~~ 111 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDAD-GDGVPL------------IEYFDYLEIYPGSKTT 111 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C-----------------------CCECEEEESSS-HHH
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccc-cccccc------------hhhcchhheecCchHH
Confidence 457899999999999999999999 47889999999999997110 000000 1111234566778888
Q ss_pred HHHHHhhcCC---CEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 517 VVQSLQSVGK---HVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 517 iv~~l~~~~~---~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
-.+.+++..+ +.++++=|-.......+. +||..
T Consensus 112 Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~--lGV~~ 147 (169)
T PF12689_consen 112 HFRRIHRKTGIPYEEMLFFDDESRNIEVVSK--LGVTC 147 (169)
T ss_dssp HHHHHHHHH---GGGEEEEES-HHHHHHHHT--TT-EE
T ss_pred HHHHHHHhcCCChhHEEEecCchhcceeeEe--cCcEE
Confidence 7777776421 457788887665555554 44443
No 203
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=63.45 E-value=54 Score=33.61 Aligned_cols=99 Identities=19% Similarity=0.178 Sum_probs=55.5
Q ss_pred cCCCCChhHHHHHHHHHhCCCe-EEEEcCCC-HHHHHHHHHHhC-CCC---CccccchhhhccCHHHHHHhhhcceEEEE
Q 045750 435 FYDPPKDSAKQALWRLAKKGVK-AKLLTGDS-LSLAIKICHEVG-IRT---THVSTGPDLELLSQESFHERVKRATVLAR 508 (792)
Q Consensus 435 ~~d~~r~~~~~~I~~l~~~Gi~-v~~~Tgd~-~~~a~~ia~~~g-i~~---~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 508 (792)
+-|-+-++..+.++.+++.|+. +.++|-.. .+..+.+++... .-. ..-.+|.. .
T Consensus 125 ipDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFIY~vS~~GvTG~~--------------------~ 184 (263)
T CHL00200 125 IPDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCIYLVSTTGVTGLK--------------------T 184 (263)
T ss_pred ecCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCcEEEEcCCCCCCCC--------------------c
Confidence 3455556777777777777777 55555554 355566666654 210 11112211 0
Q ss_pred eChhhHHHHHHHHhhcCCCEEEEEcCCcccHH---HHHhCCe-eEEecCC
Q 045750 509 LTPTQKLRVVQSLQSVGKHVVGFLGDGINDSL---ALDAANV-GISVDSG 554 (792)
Q Consensus 509 ~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~---~l~~A~v-gia~~~~ 554 (792)
..+++-.++++.++++. ..-.++|=|.|+.. .+..++. |+-+|++
T Consensus 185 ~~~~~~~~~i~~ir~~t-~~Pi~vGFGI~~~e~~~~~~~~GADGvVVGSa 233 (263)
T CHL00200 185 ELDKKLKKLIETIKKMT-NKPIILGFGISTSEQIKQIKGWNINGIVIGSA 233 (263)
T ss_pred cccHHHHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHhcCCCEEEECHH
Confidence 12455667788888765 44556899998544 4444433 5666543
No 204
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=61.99 E-value=1.1e+02 Score=27.37 Aligned_cols=85 Identities=13% Similarity=0.169 Sum_probs=50.4
Q ss_pred cCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhH
Q 045750 435 FYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQK 514 (792)
Q Consensus 435 ~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 514 (792)
+-+++.++..+.+++ |+.+.+.............+.... ++++..+.-.
T Consensus 3 i~~~~~~~~~~~l~~----~~~v~~~~~~~~~~~~~~l~~~d~---------------------------ii~~~~~~~~ 51 (133)
T PF00389_consen 3 ITDPLPDEEIERLEE----GFEVEFCDSPSEEELAERLKDADA---------------------------IIVGSGTPLT 51 (133)
T ss_dssp ESSS-SHHHHHHHHH----TSEEEEESSSSHHHHHHHHTTESE---------------------------EEESTTSTBS
T ss_pred EeccCCHHHHHHHHC----CceEEEeCCCCHHHHHHHhCCCeE---------------------------EEEcCCCCcC
Confidence 445666666666655 778877775554433333333221 4444444233
Q ss_pred HHHHHHHhhcCCCEEEEEcCCcc--cHHHHHhCCeeEEec
Q 045750 515 LRVVQSLQSVGKHVVGFLGDGIN--DSLALDAANVGISVD 552 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg~N--D~~~l~~A~vgia~~ 552 (792)
.++++.+.+ - +.+...|-|.| |.+++++-|+-++-.
T Consensus 52 ~~~l~~~~~-L-k~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 52 AEVLEAAPN-L-KLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp HHHHHHHTT---SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred HHHHhccce-e-EEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 556666633 3 67888899988 888999999988865
No 205
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=55.85 E-value=13 Score=32.67 Aligned_cols=40 Identities=33% Similarity=0.379 Sum_probs=31.1
Q ss_pred CChhHHHHHHHHHhCCCe-EEEEcCCCHHHHHHHHHHhCCC
Q 045750 439 PKDSAKQALWRLAKKGVK-AKLLTGDSLSLAIKICHEVGIR 478 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~-v~~~Tgd~~~~a~~ia~~~gi~ 478 (792)
+.+.+.+.++++.+.|++ +|+.+|.....+...|++.|+.
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 566789999999999998 9999999999999999999883
No 206
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=55.74 E-value=59 Score=32.39 Aligned_cols=202 Identities=13% Similarity=0.139 Sum_probs=95.5
Q ss_pred EehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC-e
Q 045750 5 VLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH-L 83 (792)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~-~ 83 (792)
+++..+..+.+.+...|..+.++++..... .+...+ ++-|....+...|.+|.|.+.+..++ +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------~~~~~v----~r~~~~~~i~~~~L~~GDiI~l~~g~~v 66 (230)
T PF00122_consen 3 LFLILLSNIIEIWQEYRSKKQLKKLNNLNP------------QKKVTV----IRDGRWQKIPSSELVPGDIIILKAGDIV 66 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSS------------SEEEEE----EETTEEEEEEGGGT-TTSEEEEETTEBE
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHhccCC------------CccEEE----EeccccccchHhhccceeeeeccccccc
Confidence 455666677777777788888887754332 221333 23378999999999999999997544 2
Q ss_pred EEEecccc-CCCcccccccccccCCCCCCCcccceEeeccEEeeeeE--EEEEEeeccccHHHHHH-hhhcCCCCCChHH
Q 045750 84 VVSQSSLT-GESWTAEKTADIREDHCTPLLDLKNICFMGTNVVSGSG--TGLVVSTGSKTYTSTMF-STIGKQKPPDDFE 159 (792)
Q Consensus 84 ~Vdes~lt-GEs~p~~k~~~~~~~~~~~~~~~~~~v~~Gt~v~~g~~--~~~V~~tG~~t~~~~~~-~~~~~~~~~~~~~ 159 (792)
-+|=-.+. |+.. -.....+.+..+..........|..+..|+. .+-+...-..|-..... +..+....+..-.
T Consensus 67 PaD~~ll~~g~~~---vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~ 143 (230)
T PF00122_consen 67 PADGILLESGSAY---VDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKK 143 (230)
T ss_dssp SSEEEEEESSEEE---EECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-
T ss_pred ccCccceeccccc---cccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccc
Confidence 22222222 2211 0000000011111000002237888888872 23333333334222222 2222233344333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccc--hhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHH
Q 045750 160 KGVRRISFVLICVMLIVATIIILIDYFTSKN--LSESILFGISVACALTPQMFPLIVNTSLAKGALAM 225 (792)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~P~~l~~~~~~~~~~~~~~~ 225 (792)
...++....+....+.+.+++.++.+..... ....+...+...+..+-...|.++++++..+....
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 211 (230)
T PF00122_consen 144 SPLERKLNKIAKILIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIA 211 (230)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHhcccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHH
Confidence 4455555545444444444333333222111 22344555555666666677777777776666544
No 207
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=55.59 E-value=23 Score=35.67 Aligned_cols=48 Identities=27% Similarity=0.285 Sum_probs=36.9
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHH-hCCC
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLT---GDSLSLAIKICHE-VGIR 478 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~T---gd~~~~a~~ia~~-~gi~ 478 (792)
|++.-.+.+=|++.++|+.++++|++++++| |+..........+ .|++
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 4555567778899999999999999999998 6666666554444 6764
No 208
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=55.22 E-value=38 Score=33.90 Aligned_cols=104 Identities=19% Similarity=0.165 Sum_probs=62.2
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEEEEeChhh--H
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVLARLTPTQ--K 514 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~--K 514 (792)
+-++..+++++||++|..+.++|.-.... ..+-..+|+.. +.++.+.+. .-..|+- =
T Consensus 114 ~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~~fD~vv~S~e~------------------g~~KPDp~If 174 (237)
T KOG3085|consen 114 YLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSAYFDFVVESCEV------------------GLEKPDPRIF 174 (237)
T ss_pred eccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHHHhhhhhhhhhhh------------------ccCCCChHHH
Confidence 34455699999999998888888655443 35556666631 111111111 0111221 1
Q ss_pred HHHHHHHhhcCCCEEEEEcCC-cccHHHHHhCCe-eEEecCCcHHHHhhc
Q 045750 515 LRVVQSLQSVGKHVVGFLGDG-INDSLALDAANV-GISVDSGASVAKDLA 562 (792)
Q Consensus 515 ~~iv~~l~~~~~~~v~~iGDg-~ND~~~l~~A~v-gia~~~~~~~~~~~a 562 (792)
...++.+.... +.++.+||. .||...-+.+|. ++-+.+.....++..
T Consensus 175 ~~al~~l~v~P-ee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~~ 223 (237)
T KOG3085|consen 175 QLALERLGVKP-EECVHIGDLLENDYEGARNLGWHAILVDNSITALKELE 223 (237)
T ss_pred HHHHHHhCCCh-HHeEEecCccccccHhHHHcCCEEEEEccccchhhhhh
Confidence 23344444455 788999996 699999999988 566666655555443
No 209
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=54.84 E-value=47 Score=34.45 Aligned_cols=111 Identities=14% Similarity=0.077 Sum_probs=57.0
Q ss_pred CcEEEEecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH-HHHHHhCCCCCccccchhhhccCHHHHHHhhh-cc
Q 045750 426 DMVFLGLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAI-KICHEVGIRTTHVSTGPDLELLSQESFHERVK-RA 503 (792)
Q Consensus 426 ~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~-~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~-~~ 503 (792)
+-.++|. . .+---+++.++++.|++.|+ ..++|........ ......|. |.-+.. +..... +.
T Consensus 133 ~~Vvv~~-d-~~~~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~-------g~~~~~-----i~~~~g~~~ 197 (279)
T TIGR01452 133 GAVVVGY-D-EHFSYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGT-------GSLVAA-----IETASGRQP 197 (279)
T ss_pred CEEEEec-C-CCCCHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccCh-------HHHHHH-----HHHHhCCce
Confidence 4456664 1 12236789999999999998 5677765432110 00000010 000000 000000 01
Q ss_pred eEEEEeChhhHHHHHHHHhhcCCCEEEEEcCC-cccHHHHHhCCee-EEec
Q 045750 504 TVLARLTPTQKLRVVQSLQSVGKHVVGFLGDG-INDSLALDAANVG-ISVD 552 (792)
Q Consensus 504 ~v~~~~~p~~K~~iv~~l~~~~~~~v~~iGDg-~ND~~~l~~A~vg-ia~~ 552 (792)
....+=+|+--..+++.+.... +.++||||. ..|+.+-++|++- |.+.
T Consensus 198 ~~~gKP~p~~~~~~~~~~~~~~-~~~lmIGD~~~tDI~~A~~aGi~si~V~ 247 (279)
T TIGR01452 198 LVVGKPSPYMFECITENFSIDP-ARTLMVGDRLETDILFGHRCGMTTVLVL 247 (279)
T ss_pred eccCCCCHHHHHHHHHHhCCCh-hhEEEECCChHHHHHHHHHcCCcEEEEC
Confidence 1122223333344455554444 789999999 5999999999984 4553
No 210
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=53.94 E-value=22 Score=33.22 Aligned_cols=43 Identities=12% Similarity=0.002 Sum_probs=38.5
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT 479 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~ 479 (792)
.=.+||++.+.+++|++. ++++++|.-....|..+.+.++...
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 345799999999999965 9999999999999999999998753
No 211
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=53.18 E-value=1.6e+02 Score=36.22 Aligned_cols=39 Identities=18% Similarity=0.168 Sum_probs=33.0
Q ss_pred CChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCC
Q 045750 439 PKDSAKQALWRLAKK-GVKAKLLTGDSLSLAIKICHEVGI 477 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~-Gi~v~~~Tgd~~~~a~~ia~~~gi 477 (792)
+.|++.++++.|.+. +-.|+++|||...........+++
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L 662 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDM 662 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCc
Confidence 558889999999875 778999999999999988776655
No 212
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=51.17 E-value=26 Score=31.92 Aligned_cols=82 Identities=18% Similarity=0.225 Sum_probs=57.1
Q ss_pred HHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCe--EEEEcCCC----
Q 045750 391 EELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVK--AKLLTGDS---- 464 (792)
Q Consensus 391 ~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~--v~~~Tgd~---- 464 (792)
.-+...|++|+.++.....++- ...-.+.+-.++|+-...-...+..++.+++|++.|.+ .+++-|..
T Consensus 25 ~~lr~~G~eVi~LG~~vp~e~i------~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~ 98 (137)
T PRK02261 25 RALTEAGFEVINLGVMTSQEEF------IDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGK 98 (137)
T ss_pred HHHHHCCCEEEECCCCCCHHHH------HHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCc
Confidence 3556899999998865322110 01112334578888888889999999999999999663 46666665
Q ss_pred --HHHHHHHHHHhCCC
Q 045750 465 --LSLAIKICHEVGIR 478 (792)
Q Consensus 465 --~~~a~~ia~~~gi~ 478 (792)
+.....-++++|.+
T Consensus 99 ~~~~~~~~~l~~~G~~ 114 (137)
T PRK02261 99 HDFEEVEKKFKEMGFD 114 (137)
T ss_pred cChHHHHHHHHHcCCC
Confidence 45666788899974
No 213
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=50.55 E-value=1.1e+02 Score=29.15 Aligned_cols=107 Identities=12% Similarity=0.067 Sum_probs=69.5
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCHHH-HHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHH
Q 045750 441 DSAKQALWRLAKKGVKAKLLTGDSLSL-AIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQ 519 (792)
Q Consensus 441 ~~~~~~I~~l~~~Gi~v~~~Tgd~~~~-a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~ 519 (792)
.|..+++.++++.|-++.+++=++... ...+.+.+|++ ...+.-.++++-...++
T Consensus 64 ~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~------------------------i~~~~~~~~~e~~~~i~ 119 (176)
T PF06506_consen 64 FDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD------------------------IKIYPYDSEEEIEAAIK 119 (176)
T ss_dssp HHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E------------------------EEEEEESSHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc------------------------eEEEEECCHHHHHHHHH
Confidence 356667777777777777777666654 56666767664 23566678888899999
Q ss_pred HHhhcCCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHhhcCEEeccCCchHHHHHHHHhHHhHHhHH
Q 045750 520 SLQSVGKHVVGFLGDGINDSLALDAANVGISVDSGASVAKDLADIILLEKDLNVLVAGVERGRVTFGNTM 589 (792)
Q Consensus 520 ~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~ 589 (792)
.+++.| -. +.+|++.- +..-++.|+. .++...+..+|..++.+++++....+
T Consensus 120 ~~~~~G-~~-viVGg~~~-~~~A~~~gl~---------------~v~i~sg~esi~~Al~eA~~i~~~~~ 171 (176)
T PF06506_consen 120 QAKAEG-VD-VIVGGGVV-CRLARKLGLP---------------GVLIESGEESIRRALEEALRIARARR 171 (176)
T ss_dssp HHHHTT----EEEESHHH-HHHHHHTTSE---------------EEESS--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcC-Cc-EEECCHHH-HHHHHHcCCc---------------EEEEEecHHHHHHHHHHHHHHHHHHH
Confidence 999988 44 46888742 3333444443 44556678889999999988776554
No 214
>PF03419 Peptidase_U4: Sporulation factor SpoIIGA This family belongs to family U4 of the peptidase classification.; InterPro: IPR005081 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This group of peptidases belong to the MEROPS peptidase family U4 (SpoIIGA peptidase family, clan U-). Sporulation in bacteria such as Bacillus subtilis involves the formation of a polar septum, which divides the sporangium into a mother cell and a forespore. The sigma E factor, which is encoded within the spoIIG operon, is a cell-specific regulatory protein that directs gene transcription in the mother cell. Sigma E is synthesised as an inactive proprotein pro-sigma E, which is converted to the mature factor by the putative processing enzyme SpoIIGA []. ; GO: 0004190 aspartic-type endopeptidase activity, 0006508 proteolysis, 0030436 asexual sporulation
Probab=50.51 E-value=2.7e+02 Score=29.00 Aligned_cols=25 Identities=24% Similarity=0.230 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 045750 763 FGFLLLLFIGYFTVGQLVKRIYILI 787 (792)
Q Consensus 763 w~~~l~~~~~~l~~~e~iK~~~~~~ 787 (792)
..++++..+++++....++.+.++.
T Consensus 127 ~~l~~~~~~~~~~~~~~~~~i~~~~ 151 (293)
T PF03419_consen 127 LFLLIGFIIAYLLLKRLWKYIKRRR 151 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555555666665543
No 215
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=49.74 E-value=7.8 Score=31.58 Aligned_cols=22 Identities=32% Similarity=0.676 Sum_probs=17.0
Q ss_pred EecCCCCCCcEEEE-CCCCeecc
Q 045750 52 VDQRDVVPGDIVIF-EPGDLFPG 73 (792)
Q Consensus 52 i~~~~lv~GDiI~l-~~G~~iPa 73 (792)
+...+|.+||.|.+ ++||+||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 45678999999998 58999996
No 216
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=49.65 E-value=97 Score=38.97 Aligned_cols=227 Identities=14% Similarity=0.112 Sum_probs=110.6
Q ss_pred EehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEE---eC
Q 045750 5 VLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLT---SK 81 (792)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~---~~ 81 (792)
+++..+.....-+..+|+.+++++ ... ......| ++-|....+...|.+|.|.++++ |.
T Consensus 200 ~~i~~~~~~~~~~~~~k~~~~L~~-~~~-------------~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~ 261 (1054)
T TIGR01657 200 VFMSSTSISLSVYQIRKQMQRLRD-MVH-------------KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEK 261 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hhc-------------CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCC
Confidence 344445555555666676665543 211 1122233 24588999999999999999997 44
Q ss_pred CeEEEeccccCCCccccccc---ccccC-CCCCCC---cccceE-----eeccEEeeeeEEEEEEee-ccccHHHHHHh-
Q 045750 82 HLVVSQSSLTGESWTAEKTA---DIRED-HCTPLL---DLKNIC-----FMGTNVVSGSGTGLVVST-GSKTYTSTMFS- 147 (792)
Q Consensus 82 ~~~Vdes~ltGEs~p~~k~~---~~~~~-~~~~~~---~~~~~v-----~~Gt~v~~g~~~~~V~~t-G~~t~~~~~~~- 147 (792)
.+-+|--.+.|+. ..-.+ |...+ ...+.. +.++.+ -.+..+.+|+....+... |..+..+...+
T Consensus 262 ~iPaD~~ll~g~~--~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~T 339 (1054)
T TIGR01657 262 TMPCDSVLLSGSC--IVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRT 339 (1054)
T ss_pred EecceEEEEeCcE--EEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeC
Confidence 4566777777742 22211 11111 111110 011112 235567788754433221 11111111110
Q ss_pred --------hhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHHH
Q 045750 148 --------TIGKQKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSLA 219 (792)
Q Consensus 148 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~~ 219 (792)
....-..+.+.....++-+..++.++++++++.+++.+.........+...+...+..+-...|..+++.+.
T Consensus 340 G~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~t 419 (1054)
T TIGR01657 340 GFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITIVVPPALPAELS 419 (1054)
T ss_pred CccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHH
Confidence 001111223333344455555555555555554444332221111223333344445555667888888888
Q ss_pred HHHHHHhhcCCccccchhhhcccceeEEEeccccccccCceEEE
Q 045750 220 KGALAMARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMV 263 (792)
Q Consensus 220 ~~~~~~~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~ 263 (792)
.+.... ...|.+-+.+|.+-...-|-|+..+.
T Consensus 420 i~l~~~------------~~rL~k~~il~~~~~~ie~lG~v~vi 451 (1054)
T TIGR01657 420 IGINNS------------LARLKKKGIFCTSPFRINFAGKIDVC 451 (1054)
T ss_pred HHHHHH------------HHHHHHCCEEEcCcccceecceeeEE
Confidence 776543 34555666778776666666655543
No 217
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=49.05 E-value=90 Score=32.35 Aligned_cols=61 Identities=18% Similarity=0.253 Sum_probs=35.3
Q ss_pred EEEeChhhHHHHHHHHhh--cCCCEEEEEcC-CcccHH---HHHhCCeeEEec-CCc---HHHHhhcCEEec
Q 045750 506 LARLTPTQKLRVVQSLQS--VGKHVVGFLGD-GINDSL---ALDAANVGISVD-SGA---SVAKDLADIILL 567 (792)
Q Consensus 506 ~~~~~p~~K~~iv~~l~~--~~~~~v~~iGD-g~ND~~---~l~~A~vgia~~-~~~---~~~~~~ad~vl~ 567 (792)
|.-|||.--.++++...- .| +.++++|- |.-=.| +|.+++.-+.+- ..+ ...-..||+++.
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~G-k~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~ 207 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEG-KHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVV 207 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCC-CEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 445566554455554432 25 88999999 444444 566777766662 222 233456898874
No 218
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=49.04 E-value=77 Score=33.04 Aligned_cols=43 Identities=21% Similarity=0.310 Sum_probs=28.8
Q ss_pred cCCCCChhHHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHhCC
Q 045750 435 FYDPPKDSAKQALWRLAKK-GVK---AKLLTGDSLSLA------IKICHEVGI 477 (792)
Q Consensus 435 ~~d~~r~~~~~~I~~l~~~-Gi~---v~~~Tgd~~~~a------~~ia~~~gi 477 (792)
+.++++++.++.++.+++. |++ .++..||++.+. ...|+++|+
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi 61 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGM 61 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCC
Confidence 3456677888888888766 655 466677776544 335677788
No 219
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=48.71 E-value=1.3e+02 Score=31.15 Aligned_cols=142 Identities=15% Similarity=0.146 Sum_probs=90.7
Q ss_pred HHHHHHHHHHhhccCeeEEEEEEecCCCcc-----ccC---CCC---CCCCCCCcEEEEecccCCCCChhHHHHHHHHHh
Q 045750 384 KRILNLGEELSNEGLRVIGVAVKRLLPQKS-----AQS---NRN---DGPIESDMVFLGLITFYDPPKDSAKQALWRLAK 452 (792)
Q Consensus 384 ~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~-----~~~---~~~---~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~ 452 (792)
.++....+++.++||.++.++.+.-++-.. ... -.+ -+.+. ...-++++.-.-..+++..+.++.|++
T Consensus 100 ~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~l~-~~~~v~vvsQTT~~~~~~~~i~~~l~~ 178 (280)
T TIGR00216 100 TKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLEDLENFK-VEDLLGVVSQTTLSQEDTKEIVAELKA 178 (280)
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHHHHHhCC-CCCcEEEEEcCCCcHHHHHHHHHHHHH
Confidence 567777889999999999999765332100 000 000 01111 112377777777778888888888888
Q ss_pred CC----C----eEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhc
Q 045750 453 KG----V----KAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSV 524 (792)
Q Consensus 453 ~G----i----~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~ 524 (792)
.. + .+...|-+.+..+..+|+++.+. .|...-....-.++.+..++.
T Consensus 179 ~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~m-------------------------iVVGg~nSsNT~rL~ei~~~~ 233 (280)
T TIGR00216 179 RVPQKEVPVFNTICYATQNRQDAVKELAPEVDLM-------------------------IVIGGKNSSNTTRLYEIAEEH 233 (280)
T ss_pred hCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEE-------------------------EEECCCCCchHHHHHHHHHHh
Confidence 66 2 25677888888888888887652 244444555667777888887
Q ss_pred CCCEEEEEcCC-cccHHHHHhCC-eeEEec
Q 045750 525 GKHVVGFLGDG-INDSLALDAAN-VGISVD 552 (792)
Q Consensus 525 ~~~~v~~iGDg-~ND~~~l~~A~-vgia~~ 552 (792)
+ ..+..|.+. .-|...|+.++ |||.-|
T Consensus 234 ~-~~t~~Ie~~~el~~~~l~~~~~VGiTAG 262 (280)
T TIGR00216 234 G-PPSYLIETAEELPEEWLKGVKVVGITAG 262 (280)
T ss_pred C-CCEEEECChHHCCHHHhCCCCEEEEEec
Confidence 7 566677653 23566777654 577766
No 220
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=47.66 E-value=43 Score=27.48 Aligned_cols=55 Identities=22% Similarity=0.266 Sum_probs=43.2
Q ss_pred cccCCCCChhHHHHHHHHHhCCCeEEE-EcCCCHHHHHHHHHHhCCCCCccccchh
Q 045750 433 ITFYDPPKDSAKQALWRLAKKGVKAKL-LTGDSLSLAIKICHEVGIRTTHVSTGPD 487 (792)
Q Consensus 433 i~~~d~~r~~~~~~I~~l~~~Gi~v~~-~Tgd~~~~a~~ia~~~gi~~~~~~~g~~ 487 (792)
+.+.+..++.+.+..+.|++.|+++.+ ..+++...-...|.+.|++...++...+
T Consensus 7 i~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~~~iiig~~e 62 (91)
T cd00860 7 IPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIPYILVVGDKE 62 (91)
T ss_pred EeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCCEEEEECcch
Confidence 344567788899999999999999888 6788888888889999987655555444
No 221
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=47.62 E-value=1e+02 Score=31.90 Aligned_cols=43 Identities=23% Similarity=0.373 Sum_probs=30.1
Q ss_pred CCCCChhHHHHHHHHHhCCCe---EEEEcCCCHHHHH------HHHHHhCCC
Q 045750 436 YDPPKDSAKQALWRLAKKGVK---AKLLTGDSLSLAI------KICHEVGIR 478 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~---v~~~Tgd~~~~a~------~ia~~~gi~ 478 (792)
.++++++.++.++.+++.|++ .++.-||++.+.. ..|+++|+.
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~ 61 (282)
T PRK14169 10 SKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVR 61 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCE
Confidence 456778888888888877765 4666777765543 356778883
No 222
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=47.48 E-value=75 Score=31.86 Aligned_cols=137 Identities=12% Similarity=0.138 Sum_probs=73.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC-CCC-ccccchhhhccCHHH----HHHhhhcceEEEEeCh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI-RTT-HVSTGPDLELLSQES----FHERVKRATVLARLTP 511 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi-~~~-~~~~g~~~~~~~~~~----~~~~~~~~~v~~~~~p 511 (792)
.+|+++.+..+.|++.+|++.++|..-......+-++.+- ... .+++. ....++.. +.+.+ ...|.+.+.
T Consensus 138 ~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN--~~~F~edg~l~gF~~~L--ihtfnkn~~ 213 (298)
T KOG3128|consen 138 ALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSN--YMDFDEDGNLCGFSQPL--IHTFNKNSS 213 (298)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhh--hhhhcccchhhhhhHHH--HHHHccchH
Confidence 4688999999999999999999998888777777665443 211 11111 00001000 00000 112333322
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhC-Ce----eEEecCC-----cHHHHhhcCEEeccCCchHHHHHH
Q 045750 512 TQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAA-NV----GISVDSG-----ASVAKDLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 512 ~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A-~v----gia~~~~-----~~~~~~~ad~vl~~~~~~~i~~~i 578 (792)
.-+..-=..-+..++..|...||+.-|+.|-.-+ ++ -|+..+. -+.-++.-|+|+..|..-.++.-+
T Consensus 214 v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv~~~~~iLkig~l~d~vee~~~~ymd~ydIvL~~D~tldv~~s~ 290 (298)
T KOG3128|consen 214 VLQNESEYFHQLAGRVNVILLGDSIGDLHMADGVPRVGHILKIGYLNDSVEEALEKYMDSYDIVLVHDETLDVANSI 290 (298)
T ss_pred HHHhhhHHHhhccCCceEEEeccccccchhhcCCcccccceeeecccchHHHHHHHHHhhcceEEecCcccchhHHH
Confidence 2222111112223447888999999999884322 11 2222222 123345679999888766554433
No 223
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=47.16 E-value=1.1e+02 Score=31.64 Aligned_cols=44 Identities=25% Similarity=0.376 Sum_probs=32.0
Q ss_pred cCCCCChhHHHHHHHHHhCCCe---EEEEcCCCHHHHH------HHHHHhCCC
Q 045750 435 FYDPPKDSAKQALWRLAKKGVK---AKLLTGDSLSLAI------KICHEVGIR 478 (792)
Q Consensus 435 ~~d~~r~~~~~~I~~l~~~Gi~---v~~~Tgd~~~~a~------~ia~~~gi~ 478 (792)
+.++++++.++.++.+++.|++ .++..||++.+.. ..|+++|+.
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~ 62 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 4456788888889999888876 5667788776543 356788883
No 224
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=47.11 E-value=18 Score=32.23 Aligned_cols=83 Identities=17% Similarity=0.248 Sum_probs=56.9
Q ss_pred HHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCC-e-EEEEcCCCHHHH
Q 045750 391 EELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGV-K-AKLLTGDSLSLA 468 (792)
Q Consensus 391 ~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi-~-v~~~Tgd~~~~a 468 (792)
.-+...|++|+..+... +.++. .....+.+-.++++-.......+.+++.++.|+++|. + .+++-|..+..-
T Consensus 21 ~~l~~~G~~vi~lG~~v-p~e~~-----~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~ 94 (122)
T cd02071 21 RALRDAGFEVIYTGLRQ-TPEEI-----VEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPED 94 (122)
T ss_pred HHHHHCCCEEEECCCCC-CHHHH-----HHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHH
Confidence 34667899998877542 11110 0011133446788888888899999999999999987 3 567777777666
Q ss_pred HHHHHHhCCCC
Q 045750 469 IKICHEVGIRT 479 (792)
Q Consensus 469 ~~ia~~~gi~~ 479 (792)
.+-.++.|++.
T Consensus 95 ~~~~~~~G~d~ 105 (122)
T cd02071 95 YELLKEMGVAE 105 (122)
T ss_pred HHHHHHCCCCE
Confidence 67778999853
No 225
>PLN02591 tryptophan synthase
Probab=46.56 E-value=1.6e+02 Score=30.01 Aligned_cols=99 Identities=23% Similarity=0.200 Sum_probs=56.0
Q ss_pred CCCChhHHHHHHHHHhCCCe-EEEEcCCC-HHHHHHHHHHh-CCCCCccccchhhhccCHHHHHHhhhcceEEEE-eChh
Q 045750 437 DPPKDSAKQALWRLAKKGVK-AKLLTGDS-LSLAIKICHEV-GIRTTHVSTGPDLELLSQESFHERVKRATVLAR-LTPT 512 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~-v~~~Tgd~-~~~a~~ia~~~-gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~-~~p~ 512 (792)
|-+-++..+..+.+++.|+. +.++|-.. .+..+.+++.. |.-.-....|.+- .+ ..|.
T Consensus 114 DLP~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY~Vs~~GvTG------------------~~~~~~~ 175 (250)
T PLN02591 114 DLPLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVYLVSSTGVTG------------------ARASVSG 175 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEEEeeCCCCcC------------------CCcCCch
Confidence 43447777888888888887 44554555 34566666654 2210000000000 01 1255
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCcc---cHHHHHhC-CeeEEecCC
Q 045750 513 QKLRVVQSLQSVGKHVVGFLGDGIN---DSLALDAA-NVGISVDSG 554 (792)
Q Consensus 513 ~K~~iv~~l~~~~~~~v~~iGDg~N---D~~~l~~A-~vgia~~~~ 554 (792)
+-.+.++.+++.. ..-+++|-|.+ |+..+... -=|+-+|++
T Consensus 176 ~~~~~i~~vk~~~-~~Pv~vGFGI~~~e~v~~~~~~GADGvIVGSa 220 (250)
T PLN02591 176 RVESLLQELKEVT-DKPVAVGFGISKPEHAKQIAGWGADGVIVGSA 220 (250)
T ss_pred hHHHHHHHHHhcC-CCceEEeCCCCCHHHHHHHHhcCCCEEEECHH
Confidence 6677788888876 55567899988 56665555 236666643
No 226
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=46.08 E-value=99 Score=32.06 Aligned_cols=61 Identities=18% Similarity=0.225 Sum_probs=33.6
Q ss_pred EEEeChhhHHHHHHHHhh--cCCCEEEEEcCCcc----cHHHHHhCCeeEEec-CCc---HHHHhhcCEEec
Q 045750 506 LARLTPTQKLRVVQSLQS--VGKHVVGFLGDGIN----DSLALDAANVGISVD-SGA---SVAKDLADIILL 567 (792)
Q Consensus 506 ~~~~~p~~K~~iv~~l~~--~~~~~v~~iGDg~N----D~~~l~~A~vgia~~-~~~---~~~~~~ad~vl~ 567 (792)
|.-|+|.-=.++++..+- .| +.|..+|-|.. =+.||...+.-+.+- ..+ ...-..||+++.
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~G-k~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~ 207 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRG-AHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVA 207 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCC-CEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEE
Confidence 445555544444444331 25 88889998754 233556666655442 222 233457888874
No 227
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=45.93 E-value=82 Score=31.32 Aligned_cols=97 Identities=14% Similarity=0.083 Sum_probs=61.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC-C----CCCccccchhhhccCHHHHHHhhhcceEEEEeChhh
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVG-I----RTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQ 513 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~g-i----~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 513 (792)
+-||+.+.++.|+..|+.+.++|+.+..+...-.++.+ + ......+|.++..- .-.|+-
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~g----------------KP~Pdi 156 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNG----------------KPDPDI 156 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCC----------------CCCchH
Confidence 34599999999999999999999998777666555544 2 11111223333221 122333
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 045750 514 KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGISV 551 (792)
Q Consensus 514 K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~ 551 (792)
=....+.+.......++++.|..+=+.|-++|+.-+-+
T Consensus 157 ~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~ 194 (222)
T KOG2914|consen 157 YLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVG 194 (222)
T ss_pred HHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEE
Confidence 33344444433336778888888888888888876555
No 228
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=45.68 E-value=1e+02 Score=31.98 Aligned_cols=43 Identities=21% Similarity=0.370 Sum_probs=27.7
Q ss_pred CCCCChhHHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHhCCC
Q 045750 436 YDPPKDSAKQALWRLAKK-GVK---AKLLTGDSLSLA------IKICHEVGIR 478 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~-Gi~---v~~~Tgd~~~~a------~~ia~~~gi~ 478 (792)
..+++++.++.++.++++ |++ .++..||++.+. ...|+++|+.
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~ 62 (286)
T PRK14184 10 AATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIV 62 (286)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCE
Confidence 445677777888888766 665 355567776543 3356677773
No 229
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=45.07 E-value=1.4e+02 Score=30.96 Aligned_cols=44 Identities=32% Similarity=0.416 Sum_probs=30.4
Q ss_pred cCCCCChhHHHHHHHHHhCCCe---EEEEcCCCHHHH------HHHHHHhCCC
Q 045750 435 FYDPPKDSAKQALWRLAKKGVK---AKLLTGDSLSLA------IKICHEVGIR 478 (792)
Q Consensus 435 ~~d~~r~~~~~~I~~l~~~Gi~---v~~~Tgd~~~~a------~~ia~~~gi~ 478 (792)
+.++++++.++.++.+++.|++ .++.-||++.+. ...|+++|+.
T Consensus 9 iA~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~ 61 (282)
T PRK14182 9 IAAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGIT 61 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 3456677888888888887776 456667776654 3456778883
No 230
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=45.04 E-value=29 Score=31.38 Aligned_cols=83 Identities=16% Similarity=0.185 Sum_probs=54.2
Q ss_pred HHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCe--EEEEcCCC---H
Q 045750 391 EELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVK--AKLLTGDS---L 465 (792)
Q Consensus 391 ~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~--v~~~Tgd~---~ 465 (792)
.-+...|++|+.++....+++.. ....+.+-.++|+-++--.--+..++.++.|+++|.+ ++++-|-. .
T Consensus 23 ~~l~~~GfeVi~LG~~v~~e~~v------~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~ 96 (134)
T TIGR01501 23 HAFTNAGFNVVNLGVLSPQEEFI------KAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGK 96 (134)
T ss_pred HHHHHCCCEEEECCCCCCHHHHH------HHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcCh
Confidence 34567899999887654322110 1112334568888888878888899999999999973 56677742 2
Q ss_pred HH---HHHHHHHhCCCC
Q 045750 466 SL---AIKICHEVGIRT 479 (792)
Q Consensus 466 ~~---a~~ia~~~gi~~ 479 (792)
.. ...-++++|++.
T Consensus 97 ~d~~~~~~~l~~~Gv~~ 113 (134)
T TIGR01501 97 QDFPDVEKRFKEMGFDR 113 (134)
T ss_pred hhhHHHHHHHHHcCCCE
Confidence 22 234578899753
No 231
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=41.72 E-value=51 Score=28.98 Aligned_cols=38 Identities=16% Similarity=0.273 Sum_probs=30.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI 477 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi 477 (792)
--.+++.++++.++++|++++.+|++.+ ....+.+.|.
T Consensus 54 G~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 54 GNTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 3467899999999999999999998874 4446665564
No 232
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=41.64 E-value=21 Score=30.11 Aligned_cols=24 Identities=21% Similarity=0.281 Sum_probs=20.9
Q ss_pred CCeEEEEecCCCCCCcEEEECCCCe
Q 045750 46 SELIVQVDQRDVVPGDIVIFEPGDL 70 (792)
Q Consensus 46 ~g~~~~i~~~~lv~GDiI~l~~G~~ 70 (792)
||+.. -++.++++||+|.|+-|..
T Consensus 39 NG~~a-KpS~~VK~GD~l~i~~~~~ 62 (100)
T COG1188 39 NGQRA-KPSKEVKVGDILTIRFGNK 62 (100)
T ss_pred CCEEc-ccccccCCCCEEEEEeCCc
Confidence 77766 6999999999999998876
No 233
>PRK04302 triosephosphate isomerase; Provisional
Probab=41.63 E-value=2.2e+02 Score=28.36 Aligned_cols=101 Identities=19% Similarity=0.240 Sum_probs=53.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccch-hhhccCHHHHHHhhhcceEEEEeChhhHHHH
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGP-DLELLSQESFHERVKRATVLARLTPTQKLRV 517 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~-~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 517 (792)
+-++..+.++.+++.|+.+++++|+. ..+..+ .+.|-+ .+.-.. ...... .--...+|++-.++
T Consensus 99 ~~~e~~~~v~~a~~~Gl~~I~~v~~~-~~~~~~-~~~~~~--~I~~~p~~~igt~-----------~~~~~~~~~~i~~~ 163 (223)
T PRK04302 99 TLADIEAVVERAKKLGLESVVCVNNP-ETSAAA-AALGPD--YVAVEPPELIGTG-----------IPVSKAKPEVVEDA 163 (223)
T ss_pred CHHHHHHHHHHHHHCCCeEEEEcCCH-HHHHHH-hcCCCC--EEEEeCccccccC-----------CCCCcCCHHHHHHH
Confidence 34457889999999999999999983 333332 222211 100000 000000 00001346666777
Q ss_pred HHHHhhcCCCEEEEEcCCcc---cHHHHHhCCe-eEEecCC
Q 045750 518 VQSLQSVGKHVVGFLGDGIN---DSLALDAANV-GISVDSG 554 (792)
Q Consensus 518 v~~l~~~~~~~v~~iGDg~N---D~~~l~~A~v-gia~~~~ 554 (792)
++.+++.....-...|-|.+ |+..+.++|+ |+.+|++
T Consensus 164 ~~~ir~~~~~~pvi~GggI~~~e~~~~~~~~gadGvlVGsa 204 (223)
T PRK04302 164 VEAVKKVNPDVKVLCGAGISTGEDVKAALELGADGVLLASG 204 (223)
T ss_pred HHHHHhccCCCEEEEECCCCCHHHHHHHHcCCCCEEEEehH
Confidence 77777642133345677764 5555555665 7888754
No 234
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.31 E-value=1.6e+02 Score=30.34 Aligned_cols=61 Identities=21% Similarity=0.250 Sum_probs=35.4
Q ss_pred EEEeChhhHHHHHHHHhh--cCCCEEEEEcCCcc----cHHHHHhCCeeEEec-CCc-H--HHHhhcCEEec
Q 045750 506 LARLTPTQKLRVVQSLQS--VGKHVVGFLGDGIN----DSLALDAANVGISVD-SGA-S--VAKDLADIILL 567 (792)
Q Consensus 506 ~~~~~p~~K~~iv~~l~~--~~~~~v~~iGDg~N----D~~~l~~A~vgia~~-~~~-~--~~~~~ad~vl~ 567 (792)
|.-|+|.--.++++..+- .| +.+..+|.+.. =+.||.+.+.-|.+- +.+ + ..-..||+++.
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~G-k~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIs 207 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEG-KEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVV 207 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCC-CEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 455666665566655532 35 88889998743 234666666666553 222 1 23346888864
No 235
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=41.22 E-value=1.8e+02 Score=24.97 Aligned_cols=102 Identities=13% Similarity=0.139 Sum_probs=60.3
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHh-hhcc--eEEEEeChhhHHHH
Q 045750 441 DSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHER-VKRA--TVLARLTPTQKLRV 517 (792)
Q Consensus 441 ~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~-~~~~--~v~~~~~p~~K~~i 517 (792)
+-..+..+.|++.+++++++.-|... ..-++.-|. .++.|...+. +.+.+. +.++ .+.+--+++....+
T Consensus 8 ~~~~~i~~~L~~~~~~vvvid~d~~~--~~~~~~~~~---~~i~gd~~~~---~~l~~a~i~~a~~vv~~~~~d~~n~~~ 79 (116)
T PF02254_consen 8 RIGREIAEQLKEGGIDVVVIDRDPER--VEELREEGV---EVIYGDATDP---EVLERAGIEKADAVVILTDDDEENLLI 79 (116)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHH--HHHHHHTTS---EEEES-TTSH---HHHHHTTGGCESEEEEESSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEEECCcHH--HHHHHhccc---ccccccchhh---hHHhhcCccccCEEEEccCCHHHHHHH
Confidence 34678899999988899999988765 333344443 2444433222 222221 1222 23333345555666
Q ss_pred HHHHhhc-CCCEEEEEcCCcccHHHHHhCCeeEE
Q 045750 518 VQSLQSV-GKHVVGFLGDGINDSLALDAANVGIS 550 (792)
Q Consensus 518 v~~l~~~-~~~~v~~iGDg~ND~~~l~~A~vgia 550 (792)
...+++. +...+.+.-+..++...++.+|+-..
T Consensus 80 ~~~~r~~~~~~~ii~~~~~~~~~~~l~~~g~d~v 113 (116)
T PF02254_consen 80 ALLARELNPDIRIIARVNDPENAELLRQAGADHV 113 (116)
T ss_dssp HHHHHHHTTTSEEEEEESSHHHHHHHHHTT-SEE
T ss_pred HHHHHHHCCCCeEEEEECCHHHHHHHHHCCcCEE
Confidence 6777763 32577788888888889998877544
No 236
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=41.14 E-value=1.4e+02 Score=36.90 Aligned_cols=183 Identities=15% Similarity=0.144 Sum_probs=81.0
Q ss_pred CCcEEEECCCCeecccEEEEEeCC-eEEEeccccCCCcccccccccccCCCCCC------Ccccce---EeeccEEeeee
Q 045750 59 PGDIVIFEPGDLFPGDVRLLTSKH-LVVSQSSLTGESWTAEKTADIREDHCTPL------LDLKNI---CFMGTNVVSGS 128 (792)
Q Consensus 59 ~GDiI~l~~G~~iPaD~~ll~~~~-~~Vdes~ltGEs~p~~k~~~~~~~~~~~~------~~~~~~---v~~Gt~v~~g~ 128 (792)
-|....+...|.+|.|.+.++..+ +-.|--.+.+...-+.-... +.+..+. ....+. +-+...+.+|+
T Consensus 147 ~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l~VdEs~L--TGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt 224 (917)
T COG0474 147 DGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESAL--TGESLPVEKQALPLTKSDAPLGLDRDNMLFSGT 224 (917)
T ss_pred CCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCceEEcccc--cCCCcchhccccccccccccccCCccceEEeCC
Confidence 788888888888888888887544 22333334333311111110 0111111 000111 23456667777
Q ss_pred EEEEEEeeccccHHHH---HHhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHH-HHHHHHHHHH
Q 045750 129 GTGLVVSTGSKTYTST---MFSTIGKQKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSES-ILFGISVACA 204 (792)
Q Consensus 129 ~~~~V~~tG~~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 204 (792)
.+.--...|.=+..|. +.+....-....+.+..+++-...+...++.++++..++.+..+...... +...+...++
T Consensus 225 ~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~ 304 (917)
T COG0474 225 TVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALA 304 (917)
T ss_pred EEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHH
Confidence 3322223333232242 11111112222245555565555566666666665555544433110011 2333333344
Q ss_pred HhcchhHHHHHHHHHHHHHHHhhcCCccccchhhhccccee
Q 045750 205 LTPQMFPLIVNTSLAKGALAMARDRCVVKSLGAIRDMGTMD 245 (792)
Q Consensus 205 ~~P~~l~~~~~~~~~~~~~~~~~~~i~vk~~~~~e~lg~v~ 245 (792)
+.--+.|..+++.+..+...-+ .-+.|+...+.++..++
T Consensus 305 l~va~IPegLp~~vti~la~g~--~~mak~~~ivr~l~avE 343 (917)
T COG0474 305 LAVAAVPEGLPAVVTIALALGA--QRMAKDNAIVRSLNAIE 343 (917)
T ss_pred HHHhccccchHHHHHHHHHHHH--HHHHhccchhhccchhh
Confidence 4444556666666655544322 22344444444444333
No 237
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=41.08 E-value=2.3e+02 Score=34.77 Aligned_cols=79 Identities=13% Similarity=0.178 Sum_probs=45.0
Q ss_pred EehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC-e
Q 045750 5 VLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH-L 83 (792)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~-~ 83 (792)
+++..+...+..+...|+-+.+.++......-. +|.| .+..+. -|....+...|.+|.|.++++.++ +
T Consensus 95 ~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~----~V~R-----~~~~~~--dg~~~~I~~~eLv~GDiV~l~~Gd~V 163 (867)
T TIGR01524 95 ALMVLASGLLGFIQESRAERAAYALKNMVKNTA----TVLR-----VINENG--NGSMDEVPIDALVPGDLIELAAGDII 163 (867)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhccCee----EEEE-----ecccCC--CCeEEEEEhhcCCCCCEEEECCCCEE
Confidence 344445555555666677666666532221111 1111 000000 377889999999999999998655 4
Q ss_pred EEEeccccCCC
Q 045750 84 VVSQSSLTGES 94 (792)
Q Consensus 84 ~Vdes~ltGEs 94 (792)
-+|=-.+.|+.
T Consensus 164 PaDg~li~g~~ 174 (867)
T TIGR01524 164 PADARVISARD 174 (867)
T ss_pred cccEEEEecCc
Confidence 45666666654
No 238
>PLN02645 phosphoglycolate phosphatase
Probab=41.05 E-value=56 Score=34.53 Aligned_cols=59 Identities=15% Similarity=0.142 Sum_probs=36.2
Q ss_pred HHHHHhhcCCCEEEEEcCCc-ccHHHHHhCCe-eEEecCC--c-HHHH-----hhcCEEeccCCchHHHHHH
Q 045750 517 VVQSLQSVGKHVVGFLGDGI-NDSLALDAANV-GISVDSG--A-SVAK-----DLADIILLEKDLNVLVAGV 578 (792)
Q Consensus 517 iv~~l~~~~~~~v~~iGDg~-ND~~~l~~A~v-gia~~~~--~-~~~~-----~~ad~vl~~~~~~~i~~~i 578 (792)
+.+.+.-.. +.++||||.. +|+.+-+.|++ +|.+..| . +... ..+|+++ +++..+.+.+
T Consensus 239 a~~~~~~~~-~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~--~~~~~l~~~~ 307 (311)
T PLN02645 239 LANKFGIEK-SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYT--SKISDFLTLK 307 (311)
T ss_pred HHHHcCCCc-ccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEE--CCHHHHHHHh
Confidence 334443334 6799999997 99999999997 4444322 2 2222 2367777 5566555433
No 239
>PF15584 Imm44: Immunity protein 44
Probab=38.99 E-value=14 Score=30.46 Aligned_cols=19 Identities=21% Similarity=0.321 Sum_probs=15.6
Q ss_pred CCcEEEECCCCeecccEEE
Q 045750 59 PGDIVIFEPGDLFPGDVRL 77 (792)
Q Consensus 59 ~GDiI~l~~G~~iPaD~~l 77 (792)
+.+-..|+.|++|||||+=
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4455788999999999985
No 240
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=38.72 E-value=1.1e+02 Score=38.04 Aligned_cols=79 Identities=20% Similarity=0.115 Sum_probs=41.6
Q ss_pred EEEehHhHHHHHHHHhHHHHHHHHhcc---CCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEE
Q 045750 3 ALVLISVCLRFYQEYGSSKAAMKLSEF---VRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLT 79 (792)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~ 79 (792)
+.++++...++.+++..++..+...+. .-+.-.....+...+.-|....+...|.+|.|.+.++. ...=+|=-.++
T Consensus 140 ~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g-~~l~VdES~LT 218 (941)
T TIGR01517 140 LVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISG-LSLEIDESSIT 218 (941)
T ss_pred HHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEc-CcEEEEecccC
Confidence 345667777777776666544333221 10111111111122236778888888888888888753 33335545555
Q ss_pred eCC
Q 045750 80 SKH 82 (792)
Q Consensus 80 ~~~ 82 (792)
|++
T Consensus 219 GES 221 (941)
T TIGR01517 219 GES 221 (941)
T ss_pred CCC
Confidence 554
No 241
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=38.41 E-value=4.9e+02 Score=27.24 Aligned_cols=124 Identities=14% Similarity=0.123 Sum_probs=65.4
Q ss_pred HHHHHHHHHhCCCeEEEE--c-CCCHHHHHHHHHHhCCCCC--ccc-------------------cchhhhccCHHHHHH
Q 045750 443 AKQALWRLAKKGVKAKLL--T-GDSLSLAIKICHEVGIRTT--HVS-------------------TGPDLELLSQESFHE 498 (792)
Q Consensus 443 ~~~~I~~l~~~Gi~v~~~--T-gd~~~~a~~ia~~~gi~~~--~~~-------------------~g~~~~~~~~~~~~~ 498 (792)
++..++.|++.|+++.+. . .-.++.....-++++=+.. .++ ..++.+-++...+..
T Consensus 50 v~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~ 129 (296)
T PRK14188 50 VRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGR 129 (296)
T ss_pred HHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHH
Confidence 556788999999986665 2 2344556666666654321 111 111112222222222
Q ss_pred hhhcceEEEEeChhhHHHHHHHHhh--cCCCEEEEEcC-CcccHH---HHHhCCeeEEecC----CcHHHHhhcCEEec
Q 045750 499 RVKRATVLARLTPTQKLRVVQSLQS--VGKHVVGFLGD-GINDSL---ALDAANVGISVDS----GASVAKDLADIILL 567 (792)
Q Consensus 499 ~~~~~~v~~~~~p~~K~~iv~~l~~--~~~~~v~~iGD-g~ND~~---~l~~A~vgia~~~----~~~~~~~~ad~vl~ 567 (792)
+...-..|.-|+|.--.++++...- .| +.|.++|- +.-=.| +|.+++..+.+-+ ..+.+-..||+|+.
T Consensus 130 l~~~~~~~~PcTp~ai~~ll~~~~i~~~G-k~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIs 207 (296)
T PRK14188 130 LATGETALVPCTPLGCMMLLRRVHGDLSG-LNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVA 207 (296)
T ss_pred HhCCCCCCcCCCHHHHHHHHHHhCCCCCC-CEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 2222233555666655555554421 35 88999994 333333 5667777776642 23344556898864
No 242
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=36.93 E-value=87 Score=37.71 Aligned_cols=227 Identities=19% Similarity=0.184 Sum_probs=124.3
Q ss_pred EehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeC---
Q 045750 5 VLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSK--- 81 (792)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~--- 81 (792)
++++..--...-|..++...+++++ |.+ - .+..=++.|-...+...|.+|.|+.++...
T Consensus 221 ~iisv~Si~~sv~e~r~qs~rlr~m------v~~--------~----~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~ 282 (1140)
T KOG0208|consen 221 VIISVYSIVLSVYETRKQSIRLRSM------VKF--------T----CPVTVIRDGFWETVDSSELVPGDILYIPPPGKI 282 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------hcC--------C----ceEEEEECCEEEEEeccccccccEEEECCCCeE
Confidence 3444444445556666666677665 322 1 233446679999999999999999999863
Q ss_pred ----CeEEEeccccCCCcccccccccccC-CCCCCCcccc----eEe-----eccEEeeeeEEEEEEeeccccHHHHHHh
Q 045750 82 ----HLVVSQSSLTGESWTAEKTADIRED-HCTPLLDLKN----ICF-----MGTNVVSGSGTGLVVSTGSKTYTSTMFS 147 (792)
Q Consensus 82 ----~~~Vdes~ltGEs~p~~k~~~~~~~-~~~~~~~~~~----~v~-----~Gt~v~~g~~~~~V~~tG~~t~~~~~~~ 147 (792)
++.++-+.+.-|++.. |...+ ...+.-...+ ..+ +-..+..|.-...+-..+....++...+
T Consensus 283 ~PcDa~Li~g~civNEsmLT----GESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~R 358 (1140)
T KOG0208|consen 283 MPCDALLISGDCIVNESMLT----GESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLR 358 (1140)
T ss_pred eecceEEEeCcEEeeccccc----CCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEe
Confidence 2567777777777654 21111 1111111111 121 2222334554444434443332222221
Q ss_pred hh---------cCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHHHhcchhHHHHHHHH
Q 045750 148 TI---------GKQKPPDDFEKGVRRISFVLICVMLIVATIIILIDYFTSKNLSESILFGISVACALTPQMFPLIVNTSL 218 (792)
Q Consensus 148 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~l~~~~~~~~ 218 (792)
.- ..--.|.+...+.-+-+..++.++.+++.+.++...+........+-..+.-..-.+-.-.|.++|.++
T Consensus 359 TGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAal 438 (1140)
T KOG0208|consen 359 TGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAAL 438 (1140)
T ss_pred ccccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhh
Confidence 10 111235566666666677777777777766665544332222222233333333445555688899999
Q ss_pred HHHHHHHhhcCCccccchhhhcccceeEEEeccccccccCceEEEEe
Q 045750 219 AKGALAMARDRCVVKSLGAIRDMGTMDILCIDKTGTLTMDRAIMVNH 265 (792)
Q Consensus 219 ~~~~~~~~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~ 265 (792)
..|... +.-+|-+-...|..-+-.=..|+..+.-+
T Consensus 439 tvG~~~------------a~~RLkkk~IfCisP~rIn~~G~i~~~cF 473 (1140)
T KOG0208|consen 439 TVGIIY------------AQSRLKKKGIFCISPQRINLCGKLNLVCF 473 (1140)
T ss_pred hHHHHH------------HHHHHHhcCeEEcCccceeecceeeEEEE
Confidence 888764 34556677788888776666666666543
No 243
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=36.23 E-value=57 Score=27.07 Aligned_cols=58 Identities=22% Similarity=0.260 Sum_probs=44.5
Q ss_pred EecccCC---CCChhHHHHHHHHHhCCCeEEEE-cCCCHHHHHHHHHHhCCCCCccccchhh
Q 045750 431 GLITFYD---PPKDSAKQALWRLAKKGVKAKLL-TGDSLSLAIKICHEVGIRTTHVSTGPDL 488 (792)
Q Consensus 431 G~i~~~d---~~r~~~~~~I~~l~~~Gi~v~~~-Tgd~~~~a~~ia~~~gi~~~~~~~g~~~ 488 (792)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++...-..-|...|++...++..++.
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p~~iiiG~~e~ 64 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIPFIIIIGEKEL 64 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTESEEEEEEHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCeEEEEECchhH
Confidence 3455566 66777889999999999998777 7777778888899999976655555554
No 244
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=36.00 E-value=3.5e+02 Score=34.17 Aligned_cols=78 Identities=12% Similarity=0.089 Sum_probs=49.3
Q ss_pred EehHhHHHHHHHHhHHHHHHHHhccCCCC-eEEEecCCccccCCeEEEEecCCCCCCcEEEECCCC---eecccEEEEEe
Q 045750 5 VLISVCLRFYQEYGSSKAAMKLSEFVRCP-IKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGD---LFPGDVRLLTS 80 (792)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~---~iPaD~~ll~~ 80 (792)
..+...++.++.+++++..+.-.-..-+. -...+...+.++-|..+.+...|.+|-|.+.+...+ ..=+|---++|
T Consensus 64 ~~~~~~~ed~~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~G 143 (1057)
T TIGR01652 64 TAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDG 143 (1057)
T ss_pred HHHHHHHHHHHHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCC
Confidence 34567788999999988887543332111 111121223344789999999999999999998543 23444444555
Q ss_pred CC
Q 045750 81 KH 82 (792)
Q Consensus 81 ~~ 82 (792)
+.
T Consensus 144 Es 145 (1057)
T TIGR01652 144 ET 145 (1057)
T ss_pred ee
Confidence 44
No 245
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.09 E-value=61 Score=33.58 Aligned_cols=44 Identities=16% Similarity=0.258 Sum_probs=31.0
Q ss_pred cCCCCChhHHHHHHHHHhCCCeE---EEEcCCCHHHHH------HHHHHhCCC
Q 045750 435 FYDPPKDSAKQALWRLAKKGVKA---KLLTGDSLSLAI------KICHEVGIR 478 (792)
Q Consensus 435 ~~d~~r~~~~~~I~~l~~~Gi~v---~~~Tgd~~~~a~------~ia~~~gi~ 478 (792)
+.++++++.++.++.+++.|++. ++.-||++.+.. ..|+++|+.
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~ 63 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMI 63 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 45567788888888888888763 555777776543 356778883
No 246
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=34.65 E-value=3.2e+02 Score=27.86 Aligned_cols=100 Identities=19% Similarity=0.150 Sum_probs=55.7
Q ss_pred ccCCCCChhHHHHHHHHHhCCCeE-EEEcCCC-HHHHHHHHHHhC-CCCC---ccccchhhhccCHHHHHHhhhcceEEE
Q 045750 434 TFYDPPKDSAKQALWRLAKKGVKA-KLLTGDS-LSLAIKICHEVG-IRTT---HVSTGPDLELLSQESFHERVKRATVLA 507 (792)
Q Consensus 434 ~~~d~~r~~~~~~I~~l~~~Gi~v-~~~Tgd~-~~~a~~ia~~~g-i~~~---~~~~g~~~~~~~~~~~~~~~~~~~v~~ 507 (792)
.+.|.+-++..+.++.+++.|++. .+++-.. .+....+++... ...- .-.+|..-
T Consensus 120 iipDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~~gfiy~vs~~G~TG~~~------------------- 180 (256)
T TIGR00262 120 LVADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKSQGFVYLVSRAGVTGARN------------------- 180 (256)
T ss_pred EECCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhCCCCEEEEECCCCCCCcc-------------------
Confidence 344666688889999999999984 4666666 345666766653 3110 01111100
Q ss_pred EeChhhHHHHHHHHhhcCCCEEEEEcCCcc---cHHHHHhCCe-eEEecCC
Q 045750 508 RLTPTQKLRVVQSLQSVGKHVVGFLGDGIN---DSLALDAANV-GISVDSG 554 (792)
Q Consensus 508 ~~~p~~K~~iv~~l~~~~~~~v~~iGDg~N---D~~~l~~A~v-gia~~~~ 554 (792)
..+.+-.+.++.+++.. ..-.++|=|.+ |+..+..++. |+.+|++
T Consensus 181 -~~~~~~~~~i~~lr~~~-~~pi~vgfGI~~~e~~~~~~~~GADgvVvGSa 229 (256)
T TIGR00262 181 -RAASALNELVKRLKAYS-AKPVLVGFGISKPEQVKQAIDAGADGVIVGSA 229 (256)
T ss_pred -cCChhHHHHHHHHHhhc-CCCEEEeCCCCCHHHHHHHHHcCCCEEEECHH
Confidence 01233456667777654 22356788887 4555444322 5556543
No 247
>TIGR02854 spore_II_GA sigma-E processing peptidase SpoIIGA. Members of this protein family are the stage II sporulation protein SpoIIGA. This protein acts as an activating protease for Sigma-E, one of several specialized sigma factors of the sporulation process in Bacillus subtilis and related endospore-forming bacteria.
Probab=34.30 E-value=5.6e+02 Score=26.69 Aligned_cols=21 Identities=24% Similarity=0.164 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 045750 766 LLLLFIGYFTVGQLVKRIYIL 786 (792)
Q Consensus 766 ~l~~~~~~l~~~e~iK~~~~~ 786 (792)
++..++++++....++.+.++
T Consensus 131 ~~~~~~~~~~~~~~~~~i~~~ 151 (288)
T TIGR02854 131 LIGFPILYYFVKRRMDAIRDR 151 (288)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555555444
No 248
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=33.85 E-value=2.7e+02 Score=29.74 Aligned_cols=45 Identities=22% Similarity=0.348 Sum_probs=31.5
Q ss_pred cccCCCCChhHHHHHHHHHhC-CCe---EEEEcCCCHHHHH------HHHHHhCC
Q 045750 433 ITFYDPPKDSAKQALWRLAKK-GVK---AKLLTGDSLSLAI------KICHEVGI 477 (792)
Q Consensus 433 i~~~d~~r~~~~~~I~~l~~~-Gi~---v~~~Tgd~~~~a~------~ia~~~gi 477 (792)
-.+.++++++.++.++.++++ |++ .++.-||++.+.. ..|+++||
T Consensus 62 k~vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI 116 (345)
T PLN02897 62 NVIAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGI 116 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCC
Confidence 345677888888888888876 665 4566677765543 35677888
No 249
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.45 E-value=1.9e+02 Score=29.92 Aligned_cols=62 Identities=18% Similarity=0.253 Sum_probs=34.1
Q ss_pred EEEeChhhHHHHHHHHhh--cCCCEEEEEcCCcc-cHH---HHHhCCeeEEec--CCc--HHHHhhcCEEecc
Q 045750 506 LARLTPTQKLRVVQSLQS--VGKHVVGFLGDGIN-DSL---ALDAANVGISVD--SGA--SVAKDLADIILLE 568 (792)
Q Consensus 506 ~~~~~p~~K~~iv~~l~~--~~~~~v~~iGDg~N-D~~---~l~~A~vgia~~--~~~--~~~~~~ad~vl~~ 568 (792)
|.-+||..-.++++...- .| ..|..+|-+.. =-| ++...+..+.+- ... ...-..||+++..
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~G-k~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAG-KRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSA 202 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCC-CEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEEC
Confidence 445566555555555432 25 88989998833 344 565555544442 222 2233568888643
No 250
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=33.27 E-value=37 Score=32.87 Aligned_cols=29 Identities=31% Similarity=0.436 Sum_probs=23.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLS 466 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~ 466 (792)
+|-|++.+++++|++.|...+++|+++..
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 56789999999999999999999988753
No 251
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=33.19 E-value=64 Score=33.31 Aligned_cols=48 Identities=19% Similarity=0.257 Sum_probs=41.2
Q ss_pred EecccCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH---HhCCC
Q 045750 431 GLITFYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICH---EVGIR 478 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~---~~gi~ 478 (792)
|++-..+.+-|++.++++.|++.|-++..+|.....+-+..++ ++|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 6777789999999999999999999999999999888877765 45653
No 252
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.10 E-value=81 Score=32.87 Aligned_cols=44 Identities=30% Similarity=0.413 Sum_probs=30.8
Q ss_pred cCCCCChhHHHHHHHHHhCCCe---EEEEcCCCHHHH------HHHHHHhCCC
Q 045750 435 FYDPPKDSAKQALWRLAKKGVK---AKLLTGDSLSLA------IKICHEVGIR 478 (792)
Q Consensus 435 ~~d~~r~~~~~~I~~l~~~Gi~---v~~~Tgd~~~~a------~~ia~~~gi~ 478 (792)
+.+++|++.++.++.+++.|++ .++.-||++.+. ...|+++|+.
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~ 62 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIE 62 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 3456778888888888888875 456667776544 3456778883
No 253
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=32.92 E-value=3.7e+02 Score=28.16 Aligned_cols=143 Identities=14% Similarity=0.141 Sum_probs=84.9
Q ss_pred HHHHHHHHHHhhccCeeEEEEEEecCCCc-----cccC---CCC---CCCCC-CCcEEEEecccCCCCChhHHHHHHHHH
Q 045750 384 KRILNLGEELSNEGLRVIGVAVKRLLPQK-----SAQS---NRN---DGPIE-SDMVFLGLITFYDPPKDSAKQALWRLA 451 (792)
Q Consensus 384 ~~~~~~~~~~~~~g~rvl~~a~~~~~~~~-----~~~~---~~~---~~~~e-~~l~~lG~i~~~d~~r~~~~~~I~~l~ 451 (792)
.+++...+++.++||.++.++.+.-++-. .... -.+ -+.+. .+..-++++.-.-..+++..+.++.++
T Consensus 100 ~k~~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~~~~vv~~~~e~~~l~~~~~~~v~vvsQTT~~~~~~~~i~~~l~ 179 (298)
T PRK01045 100 TKVHKEVARMSREGYEIILIGHKGHPEVEGTMGQAPGGVYLVESPEDVAKLEVKDPDKLALVTQTTLSVDDTAEIIAALK 179 (298)
T ss_pred hHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEEcCHHHHhhcccCCCCcEEEEEcCCCcHHHHHHHHHHHH
Confidence 45677788999999999999876533210 0000 000 01111 122346666666667777777777777
Q ss_pred hCCCe--------EEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhh
Q 045750 452 KKGVK--------AKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQS 523 (792)
Q Consensus 452 ~~Gi~--------v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~ 523 (792)
+..-. +...|-+.+..+..+|++.... .|...-....-.++.+..++
T Consensus 180 ~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~m-------------------------iVVGg~~SsNT~kL~~i~~~ 234 (298)
T PRK01045 180 ERFPEIQGPPKDDICYATQNRQEAVKELAPQADLV-------------------------IVVGSKNSSNSNRLREVAEE 234 (298)
T ss_pred HhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEE-------------------------EEECCCCCccHHHHHHHHHH
Confidence 66432 2446777777777777776542 24444445566677777777
Q ss_pred cCCCEEEEEcCC-cccHHHHHhC-CeeEEec
Q 045750 524 VGKHVVGFLGDG-INDSLALDAA-NVGISVD 552 (792)
Q Consensus 524 ~~~~~v~~iGDg-~ND~~~l~~A-~vgia~~ 552 (792)
.+ ..+..|.+- .-|...|+.. .|||.-|
T Consensus 235 ~~-~~t~~Ie~~~el~~~~l~~~~~VGitaG 264 (298)
T PRK01045 235 AG-APAYLIDDASEIDPEWFKGVKTVGVTAG 264 (298)
T ss_pred HC-CCEEEECChHHCcHHHhcCCCEEEEEec
Confidence 77 556667653 2245566543 5688777
No 254
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=32.46 E-value=21 Score=34.23 Aligned_cols=13 Identities=38% Similarity=0.409 Sum_probs=11.8
Q ss_pred EEeccccccccCc
Q 045750 247 LCIDKTGTLTMDR 259 (792)
Q Consensus 247 i~~DKTGTLT~~~ 259 (792)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999876
No 255
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=32.35 E-value=1.6e+02 Score=29.85 Aligned_cols=41 Identities=17% Similarity=0.176 Sum_probs=25.4
Q ss_pred CCCChhHHHHHHHHHhCCCeEEE-EcCCC-HHHHHHHHH-HhCC
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKL-LTGDS-LSLAIKICH-EVGI 477 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~-~Tgd~-~~~a~~ia~-~~gi 477 (792)
|-+-++..+.++.+++.|++.++ ++-.. .+..+.+++ ..|.
T Consensus 112 Dl~~ee~~~~~~~~~~~g~~~i~~i~P~T~~~~i~~i~~~~~~~ 155 (242)
T cd04724 112 DLPPEEAEEFREAAKEYGLDLIFLVAPTTPDERIKKIAELASGF 155 (242)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCCC
Confidence 43346777888888888887554 55443 344555655 4444
No 256
>PRK11507 ribosome-associated protein; Provisional
Probab=32.20 E-value=60 Score=25.57 Aligned_cols=22 Identities=18% Similarity=0.285 Sum_probs=19.8
Q ss_pred CCeEEEEecCCCCCCcEEEECC
Q 045750 46 SELIVQVDQRDVVPGDIVIFEP 67 (792)
Q Consensus 46 ~g~~~~i~~~~lv~GDiI~l~~ 67 (792)
||+...-.-..|.|||+|.+..
T Consensus 42 NGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 42 DGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred CCEEecccCCCCCCCCEEEECC
Confidence 8999888999999999999864
No 257
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.12 E-value=83 Score=32.57 Aligned_cols=44 Identities=25% Similarity=0.400 Sum_probs=29.2
Q ss_pred cCCCCChhHHHHHHHHHhCCCe---EEEEcCCCHHHH------HHHHHHhCCC
Q 045750 435 FYDPPKDSAKQALWRLAKKGVK---AKLLTGDSLSLA------IKICHEVGIR 478 (792)
Q Consensus 435 ~~d~~r~~~~~~I~~l~~~Gi~---v~~~Tgd~~~~a------~~ia~~~gi~ 478 (792)
+.+.++++.++.++++++.|++ .++.-||++.+. ...|+++|+.
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~ 63 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIY 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 4456777888888888877765 344467776543 4456777883
No 258
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.64 E-value=93 Score=32.22 Aligned_cols=42 Identities=24% Similarity=0.365 Sum_probs=26.4
Q ss_pred CCCCChhHHHHHHHHHhC-CCe---EEEEcCCCHHHHH------HHHHHhCC
Q 045750 436 YDPPKDSAKQALWRLAKK-GVK---AKLLTGDSLSLAI------KICHEVGI 477 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~-Gi~---v~~~Tgd~~~~a~------~ia~~~gi 477 (792)
.++++++.++-++.++++ |++ .++.-||++.+.. ..|+++|+
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi 61 (285)
T PRK14191 10 SYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGM 61 (285)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCC
Confidence 455677777778877754 665 4555676665443 34667777
No 259
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=31.60 E-value=1.2e+02 Score=28.34 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=28.5
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 045750 440 KDSAKQALWRLAKKGVKAKLLTGDSLSLAIKIC 472 (792)
Q Consensus 440 r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia 472 (792)
.+.+.++++..++.|++++-+||++--....++
T Consensus 122 S~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 122 SKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred CHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 578999999999999999999999876655554
No 260
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=31.29 E-value=80 Score=28.56 Aligned_cols=34 Identities=21% Similarity=0.177 Sum_probs=31.1
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q 045750 442 SAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEV 475 (792)
Q Consensus 442 ~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~ 475 (792)
-.+.++..|.+.|.+-+.+++|+.+.+..+++++
T Consensus 23 ~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~ 56 (135)
T PF01488_consen 23 AARAVAAALAALGAKEITIVNRTPERAEALAEEF 56 (135)
T ss_dssp HHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence 4678899999999998888999999999999999
No 261
>COG3457 Predicted amino acid racemase [Amino acid transport and metabolism]
Probab=30.56 E-value=3e+02 Score=28.83 Aligned_cols=99 Identities=19% Similarity=0.189 Sum_probs=62.8
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCCCC---------------ccccchhhhccCHHHHH
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLT---GDSLSLAIKICHEVGIRTT---------------HVSTGPDLELLSQESFH 497 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~T---gd~~~~a~~ia~~~gi~~~---------------~~~~g~~~~~~~~~~~~ 497 (792)
-|++.++++..++.++..||+++.+| |+++..|+.+ .+.|+..- .-..|.-+..-...+++
T Consensus 10 l~~ieeNak~~~~~a~~~gI~~~~vtK~~~g~~~iae~l-~~~Gi~~iaesr~~n~~~lr~~g~~~~~~Llr~P~~sei~ 88 (353)
T COG3457 10 LDKIEENAKVLQETAARYGIELYGVTKQFGGDPFIAEAL-LALGIEGIAESRIDNAIRLREAGCTIPGHLLRSPCMSEIE 88 (353)
T ss_pred HHHHHHhHHHHHHHHHHcCCEEEEEEeeccCChHHHHHH-HhcCcceeeehhHHHHHHHHHcCCCcCceEeecccHHHHH
Confidence 46778899999999999999988876 6777777665 56777321 11111122223456777
Q ss_pred HhhhcceEEEEeChhhHHHHHHHHhhcCC--CEEEEE--cCC
Q 045750 498 ERVKRATVLARLTPTQKLRVVQSLQSVGK--HVVGFL--GDG 535 (792)
Q Consensus 498 ~~~~~~~v~~~~~p~~K~~iv~~l~~~~~--~~v~~i--GDg 535 (792)
++..++.+....+|+--.++=+.-++.|+ .+.+|+ ||.
T Consensus 89 ~vv~~~Dvs~~sel~~arqlse~A~~~Gk~h~VlLmVd~~Dl 130 (353)
T COG3457 89 DVVRKVDVSTVSELDTARQLSEAAVRMGKVHDVLLMVDYGDL 130 (353)
T ss_pred HHHHhcCeEEEecHHHHHHHHHHHHHhCcceeEEEEEEcccc
Confidence 78887777777777655555444444442 455554 553
No 262
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=30.45 E-value=36 Score=30.24 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=27.2
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKI 471 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~i 471 (792)
-.+++.++++.+|++|++++.+|+.+.......
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~~ 91 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTLAKL 91 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCchhhh
Confidence 457899999999999999999999876544443
No 263
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=29.62 E-value=1.9e+02 Score=30.11 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=32.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH-HHHHhCCC
Q 045750 437 DPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIK-ICHEVGIR 478 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~-ia~~~gi~ 478 (792)
-.-.+++...=+.|++.|.+++++|.+....+.. ..+.++..
T Consensus 59 TDGP~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 59 TDGPPGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred CCChHHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 3346788899999999999999999887665544 55666663
No 264
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=29.34 E-value=32 Score=33.54 Aligned_cols=80 Identities=13% Similarity=0.154 Sum_probs=55.0
Q ss_pred HHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCe---EEEEcCCCHHH
Q 045750 391 EELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVK---AKLLTGDSLSL 467 (792)
Q Consensus 391 ~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~---v~~~Tgd~~~~ 467 (792)
.-+...|++|+.++..- +.++.. ..-.+.+-.++|+-.....-.+..++.++.+++.|.+ .+++-|...
T Consensus 106 ~~l~~~G~~vi~LG~~v-p~e~~v-----~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~~-- 177 (197)
T TIGR02370 106 TMLRANGFDVIDLGRDV-PIDTVV-----EKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGAPV-- 177 (197)
T ss_pred HHHHhCCcEEEECCCCC-CHHHHH-----HHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEChhc--
Confidence 34567899999887432 211100 0011234578899999999999999999999999875 566666654
Q ss_pred HHHHHHHhCCC
Q 045750 468 AIKICHEVGIR 478 (792)
Q Consensus 468 a~~ia~~~gi~ 478 (792)
...+++++|-+
T Consensus 178 ~~~~~~~~gad 188 (197)
T TIGR02370 178 TQDWADKIGAD 188 (197)
T ss_pred CHHHHHHhCCc
Confidence 34688888864
No 265
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=29.24 E-value=3.8e+02 Score=27.05 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=20.6
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCC--CHHHHHHHHHHh
Q 045750 441 DSAKQALWRLAKKGVKAKLLTGD--SLSLAIKICHEV 475 (792)
Q Consensus 441 ~~~~~~I~~l~~~Gi~v~~~Tgd--~~~~a~~ia~~~ 475 (792)
++..+.++.+++.|+++.++-.- +.+....+++..
T Consensus 116 ~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~ 152 (244)
T PRK13125 116 DDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLS 152 (244)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhC
Confidence 45667788888888874444333 234555555543
No 266
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=28.96 E-value=31 Score=26.74 Aligned_cols=24 Identities=21% Similarity=0.386 Sum_probs=12.9
Q ss_pred CCeEEEEecCCCCCCcEEEECCCCe
Q 045750 46 SELIVQVDQRDVVPGDIVIFEPGDL 70 (792)
Q Consensus 46 ~g~~~~i~~~~lv~GDiI~l~~G~~ 70 (792)
||+...-....|.+||+|.+ .|+.
T Consensus 38 NGe~e~rrg~Kl~~GD~V~~-~~~~ 61 (65)
T PF13275_consen 38 NGEVETRRGKKLRPGDVVEI-DGEE 61 (65)
T ss_dssp TTB----SS----SSEEEEE-TTEE
T ss_pred CCEEccccCCcCCCCCEEEE-CCEE
Confidence 88888888999999999999 4443
No 267
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=28.94 E-value=47 Score=29.35 Aligned_cols=32 Identities=22% Similarity=0.063 Sum_probs=25.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 045750 438 PPKDSAKQALWRLAKKGVKAKLLTGDSLSLAI 469 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~ 469 (792)
.-.+++.++++.++++|.+++.+|+.+.....
T Consensus 57 G~t~e~~~~~~~a~~~g~~vi~iT~~~~s~la 88 (126)
T cd05008 57 GETADTLAALRLAKEKGAKTVAITNVVGSTLA 88 (126)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEECCCCChHH
Confidence 34567999999999999999999998654433
No 268
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=28.80 E-value=52 Score=33.99 Aligned_cols=41 Identities=15% Similarity=0.266 Sum_probs=32.4
Q ss_pred CcEEEEecccCCCCChhHHHHHHHHHhCCCe-EEEEcCCCHH
Q 045750 426 DMVFLGLITFYDPPKDSAKQALWRLAKKGVK-AKLLTGDSLS 466 (792)
Q Consensus 426 ~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~-v~~~Tgd~~~ 466 (792)
+...+--++.+|.-|.+..+.+..+++.|++ +..+|||++.
T Consensus 58 g~~~i~Hlt~r~~n~~~l~~~L~~~~~~Gi~nvL~l~GD~~~ 99 (272)
T TIGR00676 58 GIPTVPHLTCIGATREEIREILREYRELGIRHILALRGDPPK 99 (272)
T ss_pred CCCeeEEeeecCCCHHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 4455666677788888899999999999998 5669999864
No 269
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=28.64 E-value=3.3e+02 Score=25.37 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=29.8
Q ss_pred HHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 045750 443 AKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT 479 (792)
Q Consensus 443 ~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~ 479 (792)
..+.=++|++.|+..++..|+.......++++.|+..
T Consensus 55 L~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~ 91 (165)
T PF00875_consen 55 LADLQESLRKLGIPLLVLRGDPEEVLPELAKEYGATA 91 (165)
T ss_dssp HHHHHHHHHHTTS-EEEEESSHHHHHHHHHHHHTESE
T ss_pred HHHHHHHHHhcCcceEEEecchHHHHHHHHHhcCcCe
Confidence 3444556777899999999999999999999999864
No 270
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=28.42 E-value=1.9e+02 Score=27.61 Aligned_cols=93 Identities=16% Similarity=0.132 Sum_probs=54.9
Q ss_pred cCCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhh-
Q 045750 435 FYDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQ- 513 (792)
Q Consensus 435 ~~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~- 513 (792)
+.-++=||+.++|++-+++|+++++-|..+-..-+-+ +|..+. | ++. .. ..-+...+-..
T Consensus 100 lkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~---Fghs~a----g-dL~--------~l---fsGyfDttiG~K 160 (229)
T COG4229 100 LKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLF---FGHSDA----G-DLN--------SL---FSGYFDTTIGKK 160 (229)
T ss_pred cccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHh---hccccc----c-cHH--------hh---hcceeecccccc
Confidence 4568889999999999999999999887664322211 111110 0 000 00 00122232222
Q ss_pred -----HHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCe
Q 045750 514 -----KLRVVQSLQSVGKHVVGFLGDGINDSLALDAANV 547 (792)
Q Consensus 514 -----K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~v 547 (792)
-.+|.+.+-... ..+++..|..+...+-+.+++
T Consensus 161 rE~~SY~kIa~~iGl~p-~eilFLSDn~~EL~AA~~vGl 198 (229)
T COG4229 161 RESQSYAKIAGDIGLPP-AEILFLSDNPEELKAAAGVGL 198 (229)
T ss_pred ccchhHHHHHHhcCCCc-hheEEecCCHHHHHHHHhcch
Confidence 244555554444 779999999998888655554
No 271
>KOG2367 consensus Alpha-isopropylmalate synthase/homocitrate synthase [Amino acid transport and metabolism]
Probab=27.80 E-value=1.4e+02 Score=32.74 Aligned_cols=161 Identities=18% Similarity=0.125 Sum_probs=94.9
Q ss_pred cCCHHHHHHHHHHHHHHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCCe
Q 045750 377 SFTSEEQKRILNLGEELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGVK 456 (792)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi~ 456 (792)
+++++.+.++ ...+...|...+-+..-.-++++.+...........+-..++++--+.+.-+-+.|+++..|++-|+
T Consensus 75 ~~~~~qK~ei---ar~L~~~gvd~IEv~fP~aSe~~~~~~~~i~k~~g~~~~I~~l~rc~~~di~~tvEAl~~aKr~~Vh 151 (560)
T KOG2367|consen 75 FLTTEQKLEI---ARQLAKLGVDIIEVGFPVASEQDFEDCKTIAKTLGYVPVICTLIRCHMDDIERTVEALKYAKRPRVH 151 (560)
T ss_pred cCCcHHHHHH---HHHHHhcCcCEEEecCcccCcchHHHHHHHHHhCCCCceEEEeeccchHHHHHHHHHhhccCcceEE
Confidence 4566655544 4566677777777665443333222211112223556688898888888888888888888899999
Q ss_pred EEEEcCCCHH----------------HHHHHHHHhCCCCCccccchhhhccCHHHHHHhhh-------cc----eEEEEe
Q 045750 457 AKLLTGDSLS----------------LAIKICHEVGIRTTHVSTGPDLELLSQESFHERVK-------RA----TVLARL 509 (792)
Q Consensus 457 v~~~Tgd~~~----------------~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~-------~~----~v~~~~ 509 (792)
+++.|.|-.. .+..+++.+|-- +.-++-++..+-+.+.+-+++. .. .-..-.
T Consensus 152 ~~~aTSd~~rey~~~kskeevi~~Ave~ikfvkslg~~-~ieFSpEd~~rse~~fl~eI~~aV~Kag~~tvnipdTVgia 230 (560)
T KOG2367|consen 152 VFIATSDIHREYKLKKSKEEVIESAVEVIKFVKSLGKW-DIEFSPEDFGRSELEFLLEILGAVIKAGVTTVNIPDTVGIA 230 (560)
T ss_pred EEecccHHHHHHHhcccHHHHHHHHHHHHHHHHhcccc-eEEECccccccCcHHHHHHHHHHHHHhCCccccCcceeccc
Confidence 9999988642 345566777731 1122222222222222222221 11 112335
Q ss_pred ChhhHHHHHHHHhhc--CCCEEEEEcCCcccHHH
Q 045750 510 TPTQKLRVVQSLQSV--GKHVVGFLGDGINDSLA 541 (792)
Q Consensus 510 ~p~~K~~iv~~l~~~--~~~~v~~iGDg~ND~~~ 541 (792)
+|.+-.++++.++.+ +.+.|+.--.-.||..+
T Consensus 231 ~P~~y~dLI~y~~tn~~~~e~v~Is~HcHND~G~ 264 (560)
T KOG2367|consen 231 TPNEYGDLIEYLKTNTPGREKVCISTHCHNDLGC 264 (560)
T ss_pred ChHHHHHHHHHHHccCCCceeEEEEEeecCCccH
Confidence 899999999999985 22455555566777654
No 272
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=27.60 E-value=2.7e+02 Score=27.51 Aligned_cols=107 Identities=16% Similarity=0.167 Sum_probs=69.9
Q ss_pred EecccCCCCChh--HHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC--CccccchhhhccCHHHHHHhhhcceEE
Q 045750 431 GLITFYDPPKDS--AKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT--THVSTGPDLELLSQESFHERVKRATVL 506 (792)
Q Consensus 431 G~i~~~d~~r~~--~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~ 506 (792)
|..-++| ++|+ .++.+-.|++.+ -|++|.-....|.++-+++||.+ +.++.=+....+ +..++
T Consensus 92 ~~LPlq~-LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~----------~~~~v 158 (244)
T KOG3109|consen 92 GRLPLQD-LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI----------EKTVV 158 (244)
T ss_pred ccCcHhh-cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC----------CCcee
Confidence 4445566 6665 567777777765 99999999999999999999953 111111111111 12356
Q ss_pred EEeChhhHHHHHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEE
Q 045750 507 ARLTPTQKLRVVQSLQSVGKHVVGFLGDGINDSLALDAANVGIS 550 (792)
Q Consensus 507 ~~~~p~~K~~iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia 550 (792)
|.-+++.=....+...-...+.+.++-|+.+.+..-+.-|..-.
T Consensus 159 cKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tv 202 (244)
T KOG3109|consen 159 CKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTV 202 (244)
T ss_pred ecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeE
Confidence 66666555555555554423789999999999988777776433
No 273
>PRK08433 flagellar motor switch protein; Validated
Probab=27.57 E-value=39 Score=29.43 Aligned_cols=26 Identities=15% Similarity=0.284 Sum_probs=19.4
Q ss_pred EEEecCCCCCCcEEEECCCCeecccE
Q 045750 50 VQVDQRDVVPGDIVIFEPGDLFPGDV 75 (792)
Q Consensus 50 ~~i~~~~lv~GDiI~l~~G~~iPaD~ 75 (792)
..+...++.+.|++.+++||+||-|-
T Consensus 38 v~LG~t~itl~dlL~Lq~GDVI~Ld~ 63 (111)
T PRK08433 38 AELGTTQISLLEILKFEKGSVIDLEK 63 (111)
T ss_pred EEEecccccHHHHhCCCCCCEEEeCC
Confidence 44566777788888888888888764
No 274
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=27.48 E-value=4.1e+02 Score=27.15 Aligned_cols=96 Identities=21% Similarity=0.205 Sum_probs=48.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEE-EEcCCC-HHHHHHHHHHhC-CCC---CccccchhhhccCHHHHHHhhhcceEEEEeC
Q 045750 437 DPPKDSAKQALWRLAKKGVKAK-LLTGDS-LSLAIKICHEVG-IRT---THVSTGPDLELLSQESFHERVKRATVLARLT 510 (792)
Q Consensus 437 d~~r~~~~~~I~~l~~~Gi~v~-~~Tgd~-~~~a~~ia~~~g-i~~---~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 510 (792)
|-+-++..+.++.+++.|+..+ ++|... .+..+.+++... .-. ..-.+|. ....
T Consensus 125 DLp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~s~gfIY~vs~~GvTG~--------------------~~~~ 184 (258)
T PRK13111 125 DLPPEEAEELRAAAKKHGLDLIFLVAPTTTDERLKKIASHASGFVYYVSRAGVTGA--------------------RSAD 184 (258)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCc--------------------ccCC
Confidence 4444667777777777777633 366665 345555555432 100 0001111 0112
Q ss_pred hhhHHHHHHHHhhcCCCEEEEEcCCcc---cHHHHHhCCeeEEecC
Q 045750 511 PTQKLRVVQSLQSVGKHVVGFLGDGIN---DSLALDAANVGISVDS 553 (792)
Q Consensus 511 p~~K~~iv~~l~~~~~~~v~~iGDg~N---D~~~l~~A~vgia~~~ 553 (792)
|..-.+.++.+++.. ..-.++|=|.+ |+..+...-=|+.+|+
T Consensus 185 ~~~~~~~i~~vk~~~-~~pv~vGfGI~~~e~v~~~~~~ADGviVGS 229 (258)
T PRK13111 185 AADLAELVARLKAHT-DLPVAVGFGISTPEQAAAIAAVADGVIVGS 229 (258)
T ss_pred CccHHHHHHHHHhcC-CCcEEEEcccCCHHHHHHHHHhCCEEEEcH
Confidence 345566777777765 44446788874 4444433223555553
No 275
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.44 E-value=1.1e+02 Score=31.80 Aligned_cols=44 Identities=27% Similarity=0.322 Sum_probs=28.5
Q ss_pred cCCCCChhHHHHHHHHHhC-CCe---EEEEcCCCHHHHH------HHHHHhCCC
Q 045750 435 FYDPPKDSAKQALWRLAKK-GVK---AKLLTGDSLSLAI------KICHEVGIR 478 (792)
Q Consensus 435 ~~d~~r~~~~~~I~~l~~~-Gi~---v~~~Tgd~~~~a~------~ia~~~gi~ 478 (792)
+.++++++.++.++.+++. |++ .++.-||++.+.. ..|+++|+.
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~ 63 (297)
T PRK14186 10 LAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIA 63 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCE
Confidence 3456677788888887765 665 3556677765443 356777873
No 276
>PRK15108 biotin synthase; Provisional
Probab=27.12 E-value=6.4e+02 Score=27.04 Aligned_cols=86 Identities=15% Similarity=0.200 Sum_probs=51.0
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHH
Q 045750 441 DSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQS 520 (792)
Q Consensus 441 ~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 520 (792)
+...+.++.+|+.|+.+.+.-|.-......--++.|++.-.+ .++. ..+.+. .++...+.+++.+.++.
T Consensus 111 e~i~~~i~~ik~~~i~v~~s~G~ls~e~l~~LkeAGld~~n~----~leT-~p~~f~------~I~~~~~~~~rl~~i~~ 179 (345)
T PRK15108 111 PYLEQMVQGVKAMGLETCMTLGTLSESQAQRLANAGLDYYNH----NLDT-SPEFYG------NIITTRTYQERLDTLEK 179 (345)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcCCHHHHHHHHHcCCCEEee----cccc-ChHhcC------CCCCCCCHHHHHHHHHH
Confidence 567788888898888876655655555555556778753110 0000 111111 13344577888899999
Q ss_pred HhhcCCCEEE---EEcCCccc
Q 045750 521 LQSVGKHVVG---FLGDGIND 538 (792)
Q Consensus 521 l~~~~~~~v~---~iGDg~ND 538 (792)
.++.| ..+. ++|-|..+
T Consensus 180 a~~~G-~~v~sg~i~GlgEt~ 199 (345)
T PRK15108 180 VRDAG-IKVCSGGIVGLGETV 199 (345)
T ss_pred HHHcC-CceeeEEEEeCCCCH
Confidence 98887 4443 56665543
No 277
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=27.09 E-value=1e+02 Score=22.83 Aligned_cols=37 Identities=11% Similarity=0.187 Sum_probs=28.8
Q ss_pred CCCeEEEecCCccccCCeEEEEecC-CCCCCcEEEECCCCeecc
Q 045750 31 RCPIKVQRCAGRVVQSELIVQVDQR-DVVPGDIVIFEPGDLFPG 73 (792)
Q Consensus 31 ~~~~~v~r~~~~~~~~g~~~~i~~~-~lv~GDiI~l~~G~~iPa 73 (792)
...+.|+.+ ||+..+|+.. +..+||.|.+.+.+..+.
T Consensus 5 ~~~aiVlT~------dGeF~~ik~~~~~~vG~eI~~~~~~~~~~ 42 (56)
T PF12791_consen 5 KKYAIVLTP------DGEFIKIKRKPGMEVGQEIEFDEKDIINK 42 (56)
T ss_pred CCEEEEEcC------CCcEEEEeCCCCCcccCEEEEechhhccc
Confidence 346677774 8998888766 799999999998887653
No 278
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=26.90 E-value=74 Score=28.55 Aligned_cols=81 Identities=17% Similarity=0.215 Sum_probs=54.9
Q ss_pred HHhhccCeeEEEEEEecCCCccccCCCCCCCCCCCcEEEEecccCCCCChhHHHHHHHHHhCCC-eE-EEEcCCCH----
Q 045750 392 ELSNEGLRVIGVAVKRLLPQKSAQSNRNDGPIESDMVFLGLITFYDPPKDSAKQALWRLAKKGV-KA-KLLTGDSL---- 465 (792)
Q Consensus 392 ~~~~~g~rvl~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~~Gi-~v-~~~Tgd~~---- 465 (792)
-+...|+.|+-++....+++. -....+.+-.++|+-++--.--+..++.++.|+++|+ .+ +++-|-..
T Consensus 22 ~L~~~GfeVidLG~~v~~e~~------v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~~ 95 (128)
T cd02072 22 AFTEAGFNVVNLGVLSPQEEF------IDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGNLVVGKQ 95 (128)
T ss_pred HHHHCCCEEEECCCCCCHHHH------HHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECCCCCChh
Confidence 455789999988765432211 0111234557889989888888999999999999998 44 55555521
Q ss_pred --HHHHHHHHHhCCC
Q 045750 466 --SLAIKICHEVGIR 478 (792)
Q Consensus 466 --~~a~~ia~~~gi~ 478 (792)
.....-.+++|.+
T Consensus 96 d~~~~~~~L~~~Gv~ 110 (128)
T cd02072 96 DFEDVEKRFKEMGFD 110 (128)
T ss_pred hhHHHHHHHHHcCCC
Confidence 2334567888885
No 279
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=26.68 E-value=90 Score=31.34 Aligned_cols=38 Identities=24% Similarity=0.267 Sum_probs=34.7
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 045750 442 SAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT 479 (792)
Q Consensus 442 ~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~ 479 (792)
-.++.|++|++.|+.|+=++-|...+-..+-+++||..
T Consensus 197 ~l~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 197 ILKNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 34678999999999999999999999999999999964
No 280
>cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon binding domain is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. This domain is also found in the accessory subunit of mitochondrial polymerase gamma (Pol gamma b).
Probab=26.66 E-value=1.2e+02 Score=24.96 Aligned_cols=50 Identities=12% Similarity=0.143 Sum_probs=37.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEE-EcCCCHHHHHHHHHHhCCCCCccccchh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKL-LTGDSLSLAIKICHEVGIRTTHVSTGPD 487 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~-~Tgd~~~~a~~ia~~~gi~~~~~~~g~~ 487 (792)
...+.+.+..+.||+.|+++.+ .++++.......|.+.|.....++...+
T Consensus 15 ~~~~~a~~~~~~Lr~~g~~v~~~~~~~~~~k~~~~a~~~g~~~~iiig~~e 65 (94)
T cd00738 15 EAREYAQKLLNALLANGIRVLYDDRERKIGKKFREADLRGVPFAVVVGEDE 65 (94)
T ss_pred HHHHHHHHHHHHHHHCCCEEEecCCCcCHhHHHHHHHhCCCCEEEEECCCh
Confidence 4566777788999999999888 4567888888888999986555444433
No 281
>PRK09529 bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta; Reviewed
Probab=26.28 E-value=3.8e+02 Score=31.21 Aligned_cols=141 Identities=20% Similarity=0.264 Sum_probs=93.1
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhc-cCHHHHHHhhhcceEEEEeChhhHHHHHH
Q 045750 441 DSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLEL-LSQESFHERVKRATVLARLTPTQKLRVVQ 519 (792)
Q Consensus 441 ~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~-~~~~~~~~~~~~~~v~~~~~p~~K~~iv~ 519 (792)
+++++.+++++++|+-+.++ |+-.+....-..+.|++...+.-|.+... .+- ..-.+.-..+|+..+|.+..++..
T Consensus 149 e~a~~Ia~Elq~r~~lvfl~-G~l~EQl~e~gvk~G~~~~lvp~G~~~ts~vHa--~g~AiRaAliFGgv~pGd~~ei~d 225 (711)
T PRK09529 149 EKAKKIIKELQKKNLLTFLC-GEVIEQLIEAGVKLGLDYRLVPLGDDITSAIHA--ANFAIRAALIFGGVEPGDYEELLD 225 (711)
T ss_pred HHHHHHHHHHHHCCcEEEEc-CcHHHHhhhcccccccceeEEecCCchhhHHHH--HHHHHHHHHHhcCCCCcCHHHHHH
Confidence 88999999999999988877 66666666667778887777777744321 111 111223345899999999999999
Q ss_pred HHhhcCCCEEEEEcCCcccHHHHHhCC---eeEEe--cCCcHHHHhhcCEEeccCCchHHHHHHHHhHHhH
Q 045750 520 SLQSVGKHVVGFLGDGINDSLALDAAN---VGISV--DSGASVAKDLADIILLEKDLNVLVAGVERGRVTF 585 (792)
Q Consensus 520 ~l~~~~~~~v~~iGDg~ND~~~l~~A~---vgia~--~~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~ 585 (792)
+.+++-+..|.+.|. .+|..+-.+|+ .|+=+ .+...+....-+.++.+.+.+.+++-=.+.|-+.
T Consensus 226 Y~~nRV~AfViA~G~-~s~~~~A~aaGai~~GfPVItd~~~pe~~~~~~~~~~~~~~d~iv~~~le~rgik 295 (711)
T PRK09529 226 YTKERVPAFVNALGE-LDDEWVAAAAGAINLGFPVITDQDVPEGICVPEWVLSEPDYDKIVQKALEVRGIK 295 (711)
T ss_pred HHHhhccEEEEeecc-cCHHHHHHHhhHHhcCCcEeeCCCCccccccccccccCCCHHHHHHHHHHhcCce
Confidence 999885588888994 55544433332 23322 2333333345677788888887776666666443
No 282
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.98 E-value=1.4e+02 Score=31.09 Aligned_cols=42 Identities=24% Similarity=0.387 Sum_probs=27.1
Q ss_pred CCCCChhHHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHhCC
Q 045750 436 YDPPKDSAKQALWRLAKK-GVK---AKLLTGDSLSLA------IKICHEVGI 477 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~-Gi~---v~~~Tgd~~~~a------~~ia~~~gi 477 (792)
.++++++.++-++.++++ |++ .++.-||++.+. ...|+++|+
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi 61 (293)
T PRK14185 10 SAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGF 61 (293)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCC
Confidence 455677777778887766 655 355667766543 335667777
No 283
>TIGR00559 pdxJ pyridoxine 5'-phosphate synthase. PdxJ is required in the biosynthesis of pyridoxine (vitamin B6), a precursor to the enzyme cofactor pyridoxal phosphate. ECOCYC describes the predicted reaction equation as 1-amino-propan-2-one-3-phosphate + deoxyxylulose-5-phosphate = pyridoxine-5'-phosphate. The product of that reaction is oxidized by PdxH to pyridoxal 5'-phosphate.
Probab=25.96 E-value=1.3e+02 Score=29.94 Aligned_cols=49 Identities=27% Similarity=0.340 Sum_probs=39.7
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhh
Q 045750 440 KDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLE 489 (792)
Q Consensus 440 r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~ 489 (792)
++..++.|++|+++||+|-++ =|+.......|+++|-+.-...+|..-.
T Consensus 109 ~~~l~~~i~~l~~~gI~VSLF-iDP~~~qi~~A~~~GAd~VELhTG~YA~ 157 (237)
T TIGR00559 109 KDKLCELVKRFHAAGIEVSLF-IDADKDQISAAAEVGADRIEIHTGPYAN 157 (237)
T ss_pred HHHHHHHHHHHHHCCCEEEEE-eCCCHHHHHHHHHhCcCEEEEechhhhc
Confidence 466889999999999999999 6777888899999998765666665433
No 284
>COG2194 Predicted membrane-associated, metal-dependent hydrolase [General function prediction only]
Probab=25.89 E-value=6e+02 Score=29.31 Aligned_cols=23 Identities=26% Similarity=0.202 Sum_probs=11.6
Q ss_pred cChhHHHHHHHHHHHHHHHHHHH
Q 045750 758 LPLTYFGFLLLLFIGYFTVGQLV 780 (792)
Q Consensus 758 l~~~~w~~~l~~~~~~l~~~e~i 780 (792)
+.+..+++++++++...++.-.+
T Consensus 115 ~t~~~~~~l~~~g~l~~ll~~~~ 137 (555)
T COG2194 115 LTLYFLLWLVLVGLLPALLIVLV 137 (555)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555544444443
No 285
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=25.88 E-value=1.1e+02 Score=24.56 Aligned_cols=47 Identities=21% Similarity=0.257 Sum_probs=36.3
Q ss_pred cccCCCCChhHHHHHHHHHhCCCeEEEE-cCCCHHHHHHHHHHhCCCC
Q 045750 433 ITFYDPPKDSAKQALWRLAKKGVKAKLL-TGDSLSLAIKICHEVGIRT 479 (792)
Q Consensus 433 i~~~d~~r~~~~~~I~~l~~~Gi~v~~~-Tgd~~~~a~~ia~~~gi~~ 479 (792)
+...++.++.+.+..+.|+++|+++.+- .+++.......|+..|+..
T Consensus 7 ~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~~ 54 (91)
T cd00859 7 VPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGARF 54 (91)
T ss_pred EEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCCE
Confidence 3455667778888999999999998874 4457777788888888754
No 286
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=25.73 E-value=56 Score=28.82 Aligned_cols=31 Identities=23% Similarity=0.021 Sum_probs=26.2
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAI 469 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~ 469 (792)
-.+++.++++.+|++|.+++.+|+.......
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la 89 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDSPLA 89 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCCcHH
Confidence 4688999999999999999999998765433
No 287
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=25.64 E-value=6.8e+02 Score=28.73 Aligned_cols=79 Identities=16% Similarity=0.158 Sum_probs=57.3
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCCH-HHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHH
Q 045750 442 SAKQALWRLAKKGVKAKLLTGDSL-SLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQS 520 (792)
Q Consensus 442 ~~~~~I~~l~~~Gi~v~~~Tgd~~-~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 520 (792)
|+-.+++.+++.+-++.+++=.+. ..+..++.-+|++- ..+.-.++++-...++.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i------------------------~~~~~~~~~e~~~~v~~ 150 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRI------------------------EQRSYVTEEDARGQINE 150 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce------------------------EEEEecCHHHHHHHHHH
Confidence 577788888887778777776654 45566777777753 36788899999999999
Q ss_pred HhhcCCCEEEEEcCCcccHHHHHhCCe
Q 045750 521 LQSVGKHVVGFLGDGINDSLALDAANV 547 (792)
Q Consensus 521 l~~~~~~~v~~iGDg~ND~~~l~~A~v 547 (792)
+++.| ..+ .+||+.- +.+-++++.
T Consensus 151 lk~~G-~~~-vvG~~~~-~~~A~~~g~ 174 (538)
T PRK15424 151 LKANG-IEA-VVGAGLI-TDLAEEAGM 174 (538)
T ss_pred HHHCC-CCE-EEcCchH-HHHHHHhCC
Confidence 99998 444 6899865 344455555
No 288
>PRK04980 hypothetical protein; Provisional
Probab=25.51 E-value=1.1e+02 Score=26.25 Aligned_cols=46 Identities=13% Similarity=0.237 Sum_probs=31.8
Q ss_pred CCCCCCcEEEEC--CCCeecccEEEEEeCCeEEE-----eccccCCCcccccc
Q 045750 55 RDVVPGDIVIFE--PGDLFPGDVRLLTSKHLVVS-----QSSLTGESWTAEKT 100 (792)
Q Consensus 55 ~~lv~GDiI~l~--~G~~iPaD~~ll~~~~~~Vd-----es~ltGEs~p~~k~ 100 (792)
...+|||++.+. .+.+.-|+..+++-.-...| .+...|+|.+..|.
T Consensus 30 ~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~eLte~hA~qEg~sL~elk~ 82 (102)
T PRK04980 30 SHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDELNEKHAEQENMTLPELKQ 82 (102)
T ss_pred cCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhhCCHHHHHHhCCCHHHHHH
Confidence 679999999997 88888999999875432222 23445555555553
No 289
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.31 E-value=1.4e+02 Score=30.90 Aligned_cols=43 Identities=30% Similarity=0.452 Sum_probs=29.0
Q ss_pred CCCCChhHHHHHHHHHhCCCeE---EEEcCCCHHHH------HHHHHHhCCC
Q 045750 436 YDPPKDSAKQALWRLAKKGVKA---KLLTGDSLSLA------IKICHEVGIR 478 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v---~~~Tgd~~~~a------~~ia~~~gi~ 478 (792)
.++++++.++.++.++++|++. ++.-||++.+. ...|+++|+.
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~ 61 (282)
T PRK14166 10 SAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIK 61 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 4556778888888888777663 55667776544 3356777883
No 290
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=25.30 E-value=87 Score=25.86 Aligned_cols=51 Identities=16% Similarity=0.112 Sum_probs=37.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEE-EcCCCHHHHHHHHHHhCCCCCccccchhh
Q 045750 438 PPKDSAKQALWRLAKKGVKAKL-LTGDSLSLAIKICHEVGIRTTHVSTGPDL 488 (792)
Q Consensus 438 ~~r~~~~~~I~~l~~~Gi~v~~-~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~ 488 (792)
+..+.+.+..+.|+++|+++.+ ..+++...-..-|.+.|.+.-.++...++
T Consensus 15 ~~~~~a~~la~~Lr~~g~~v~~d~~~~~l~k~i~~a~~~g~~~~iiiG~~e~ 66 (94)
T cd00861 15 VQQELAEKLYAELQAAGVDVLLDDRNERPGVKFADADLIGIPYRIVVGKKSA 66 (94)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCCcccchhHHHhcCCCEEEEECCchh
Confidence 4556677788999999999887 45677777777888899876555554443
No 291
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=25.27 E-value=1.4e+02 Score=23.47 Aligned_cols=25 Identities=28% Similarity=0.315 Sum_probs=18.3
Q ss_pred CCeEEEEecC---CCCCCcEEEECCCCe
Q 045750 46 SELIVQVDQR---DVVPGDIVIFEPGDL 70 (792)
Q Consensus 46 ~g~~~~i~~~---~lv~GDiI~l~~G~~ 70 (792)
+|..++|+.. ++.|||-|.+..|.-
T Consensus 24 ~G~~~~V~~~lv~~v~~Gd~VLVHaG~A 51 (68)
T PF01455_consen 24 GGVRREVSLALVPDVKVGDYVLVHAGFA 51 (68)
T ss_dssp TTEEEEEEGTTCTSB-TT-EEEEETTEE
T ss_pred CCcEEEEEEEEeCCCCCCCEEEEecChh
Confidence 7888888654 578999999999854
No 292
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=24.90 E-value=2.5e+02 Score=35.22 Aligned_cols=36 Identities=8% Similarity=0.220 Sum_probs=23.3
Q ss_pred CCcEEEECCCCeecccEEEEEeCC-eEEEeccccCCC
Q 045750 59 PGDIVIFEPGDLFPGDVRLLTSKH-LVVSQSSLTGES 94 (792)
Q Consensus 59 ~GDiI~l~~G~~iPaD~~ll~~~~-~~Vdes~ltGEs 94 (792)
-|-...+...|.+|.|.++++.++ +-+|=-.+.|+.
T Consensus 148 dg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~ 184 (997)
T TIGR01106 148 DGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG 184 (997)
T ss_pred CCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC
Confidence 366677777778888877776444 445555555553
No 293
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=24.41 E-value=87 Score=29.05 Aligned_cols=38 Identities=16% Similarity=0.099 Sum_probs=31.9
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGI 477 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi 477 (792)
+||++.+.++.|.+. +++++.|......|..+.+.+.-
T Consensus 37 ~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 37 LRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDP 74 (159)
T ss_dssp E-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTT
T ss_pred eCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhh
Confidence 499999999999555 99999999999999999999985
No 294
>KOG0541 consensus Alkyl hydroperoxide reductase/peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=24.34 E-value=1.3e+02 Score=27.85 Aligned_cols=40 Identities=13% Similarity=0.049 Sum_probs=35.8
Q ss_pred ChhHHHHHHHHHhCCCe-EEEEcCCCHHHHHHHHHHhCCCC
Q 045750 440 KDSAKQALWRLAKKGVK-AKLLTGDSLSLAIKICHEVGIRT 479 (792)
Q Consensus 440 r~~~~~~I~~l~~~Gi~-v~~~Tgd~~~~a~~ia~~~gi~~ 479 (792)
-|+-.+-.++|+.+||. ++.+|.+++-...+.++.+|...
T Consensus 64 vPGyi~~a~elksKGVd~iicvSVnDpFv~~aW~k~~g~~~ 104 (171)
T KOG0541|consen 64 VPGYIEKADELKSKGVDEIICVSVNDPFVMKAWAKSLGAND 104 (171)
T ss_pred CchHHHHHHHHHhcCCcEEEEEecCcHHHHHHHHhhcCccc
Confidence 47788889999999998 88899999999999999998754
No 295
>COG4996 Predicted phosphatase [General function prediction only]
Probab=24.11 E-value=1.7e+02 Score=26.21 Aligned_cols=44 Identities=16% Similarity=-0.013 Sum_probs=40.0
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRT 479 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~ 479 (792)
+=.++|+++++++.+|+.|.-+-.+|=..+..|...-+.+++..
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~ 82 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQ 82 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhh
Confidence 33578999999999999999999999999999999999999853
No 296
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=24.07 E-value=2e+02 Score=29.29 Aligned_cols=104 Identities=14% Similarity=0.126 Sum_probs=60.2
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH---HhCCCCCccc-cchhhhcc----CHHHHHHhhhcceEEEEeC
Q 045750 439 PKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICH---EVGIRTTHVS-TGPDLELL----SQESFHERVKRATVLARLT 510 (792)
Q Consensus 439 ~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~---~~gi~~~~~~-~g~~~~~~----~~~~~~~~~~~~~v~~~~~ 510 (792)
+-+++++.|+.+++.|+.+.-+|.+.+.......+ ++||+-.... ..+..... +...-.-...+-.+|+ .
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft--~ 159 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFT--G 159 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEe--C
Confidence 45789999999999999999999999876665544 4677532211 11000000 0000000111223333 3
Q ss_pred hhhHHHHHHHHhh----cCCCEEEEEcCCcccHHHHHhC
Q 045750 511 PTQKLRVVQSLQS----VGKHVVGFLGDGINDSLALDAA 545 (792)
Q Consensus 511 p~~K~~iv~~l~~----~~~~~v~~iGDg~ND~~~l~~A 545 (792)
..+|.+....+-+ .. +.+.+|-|....+..+..|
T Consensus 160 ~~~KG~~L~~fL~~~~~~p-k~IIfIDD~~~nl~sv~~a 197 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSP-KKIIFIDDNKENLKSVEKA 197 (252)
T ss_pred CCccHHHHHHHHHHcCCCC-CeEEEEeCCHHHHHHHHHH
Confidence 3566665555444 34 7799999998887755443
No 297
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.87 E-value=1.3e+02 Score=31.13 Aligned_cols=44 Identities=30% Similarity=0.411 Sum_probs=28.8
Q ss_pred cCCCCChhHHHHHHHHHhCCCeE---EEEcCCCHHHH------HHHHHHhCCC
Q 045750 435 FYDPPKDSAKQALWRLAKKGVKA---KLLTGDSLSLA------IKICHEVGIR 478 (792)
Q Consensus 435 ~~d~~r~~~~~~I~~l~~~Gi~v---~~~Tgd~~~~a------~~ia~~~gi~ 478 (792)
+.++++++.++.++.+++.|++. ++.-||++.+. ...|+++|+.
T Consensus 11 va~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~ 63 (284)
T PRK14193 11 TADEIKADLAERVAALKEKGITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGIT 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 44566777888888888777764 44467666543 3356777873
No 298
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.49 E-value=1.1e+02 Score=31.60 Aligned_cols=44 Identities=27% Similarity=0.476 Sum_probs=27.2
Q ss_pred ccCCCCChhHHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHhCC
Q 045750 434 TFYDPPKDSAKQALWRLAKK-GVK---AKLLTGDSLSLA------IKICHEVGI 477 (792)
Q Consensus 434 ~~~d~~r~~~~~~I~~l~~~-Gi~---v~~~Tgd~~~~a------~~ia~~~gi 477 (792)
.+.++++++.++-++.+++. |++ .++.-||++.+. ...|+++|+
T Consensus 15 ~iA~~i~~~l~~~i~~l~~~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi 68 (287)
T PRK14176 15 ALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKACERVGI 68 (287)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCC
Confidence 34566677777777777766 654 345556655433 335667777
No 299
>PRK10671 copA copper exporting ATPase; Provisional
Probab=23.42 E-value=3.2e+02 Score=33.44 Aligned_cols=36 Identities=22% Similarity=0.199 Sum_probs=26.1
Q ss_pred CCcEEEECCCCeecccEEEEEeCC-eEEEeccccCCC
Q 045750 59 PGDIVIFEPGDLFPGDVRLLTSKH-LVVSQSSLTGES 94 (792)
Q Consensus 59 ~GDiI~l~~G~~iPaD~~ll~~~~-~~Vdes~ltGEs 94 (792)
-|....+...+..|-|.+++.... +-+|=-.+.|++
T Consensus 330 ~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~ 366 (834)
T PRK10671 330 DEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEA 366 (834)
T ss_pred CCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceE
Confidence 456677888888899988887544 557766677753
No 300
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=23.29 E-value=55 Score=24.23 Aligned_cols=13 Identities=31% Similarity=0.503 Sum_probs=10.8
Q ss_pred CCCcEEEECCCCe
Q 045750 58 VPGDIVIFEPGDL 70 (792)
Q Consensus 58 v~GDiI~l~~G~~ 70 (792)
.+||+|.++.|-.
T Consensus 2 ~~GDvV~LKSGGp 14 (53)
T PF09926_consen 2 KIGDVVQLKSGGP 14 (53)
T ss_pred CCCCEEEEccCCC
Confidence 5899999998853
No 301
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=23.15 E-value=71 Score=29.93 Aligned_cols=24 Identities=33% Similarity=0.414 Sum_probs=20.7
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCC
Q 045750 440 KDSAKQALWRLAKKGVKAKLLTGD 463 (792)
Q Consensus 440 r~~~~~~I~~l~~~Gi~v~~~Tgd 463 (792)
-+++.++|+++++.|++++|+|.-
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred chhHHHHHHHHHhcCCeEEEEeCc
Confidence 457999999999999999999965
No 302
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=23.02 E-value=7.2e+02 Score=25.78 Aligned_cols=142 Identities=17% Similarity=0.064 Sum_probs=83.4
Q ss_pred HHHHHHHHHHhhccCeeEEEEEEecCCCcc-----ccC---CCC---CCCCCCCcEEEEecccCCCCChhHHHHHHHHHh
Q 045750 384 KRILNLGEELSNEGLRVIGVAVKRLLPQKS-----AQS---NRN---DGPIESDMVFLGLITFYDPPKDSAKQALWRLAK 452 (792)
Q Consensus 384 ~~~~~~~~~~~~~g~rvl~~a~~~~~~~~~-----~~~---~~~---~~~~e~~l~~lG~i~~~d~~r~~~~~~I~~l~~ 452 (792)
.++....++++++||.++.++.+.-++-.. +.. -.+ -+.+. ...=++++.-.-...++..+.++.+++
T Consensus 103 ~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~l~-~~~kv~~vsQTT~~~~~~~~iv~~l~~ 181 (281)
T PRK12360 103 KKIQNIVEEYYNKGYSIIIVGDKNHPEVIGINGWCDNSAYIVNSIEEVENIP-FLDKACVVAQTTIIPELWEDILNVIKL 181 (281)
T ss_pred hHHHHHHHHHHhCCCEEEEEcCCCCceeeEeccCcCCCeEEECCHHHHhhCc-cccCEEEEECCCCcHHHHHHHHHHHHH
Confidence 456777889999999999998764332100 000 000 00111 012355666666667777777777776
Q ss_pred CCCe------EEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHHHHhhcCC
Q 045750 453 KGVK------AKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQSLQSVGK 526 (792)
Q Consensus 453 ~Gi~------v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~~~ 526 (792)
..-+ +...|-+.+..+..+|+++.+. .|...-....-.++.+..++.+
T Consensus 182 ~~~~~~v~~TIC~aT~~RQ~a~~~La~~vD~m-------------------------iVVGg~~SsNT~rL~eia~~~~- 235 (281)
T PRK12360 182 KSKELVFFNTICSATKKRQESAKELSKEVDVM-------------------------IVIGGKHSSNTQKLVKICEKNC- 235 (281)
T ss_pred hCcccccCCCcchhhhhHHHHHHHHHHhCCEE-------------------------EEecCCCCccHHHHHHHHHHHC-
Confidence 5433 3445666677777777766542 2444444556667777777776
Q ss_pred CEEEEEcCC-cccHHHHHhC-CeeEEec
Q 045750 527 HVVGFLGDG-INDSLALDAA-NVGISVD 552 (792)
Q Consensus 527 ~~v~~iGDg-~ND~~~l~~A-~vgia~~ 552 (792)
..+..|.+- .-|...|+.+ .|||.-|
T Consensus 236 ~~t~~Ie~~~el~~~~~~~~~~VGitaG 263 (281)
T PRK12360 236 PNTFHIETADELDLEMLKDYKIIGITAG 263 (281)
T ss_pred CCEEEECChHHCCHHHhCCCCEEEEEcc
Confidence 556566543 3356677644 5788777
No 303
>PLN02389 biotin synthase
Probab=22.57 E-value=6.7e+02 Score=27.33 Aligned_cols=86 Identities=16% Similarity=0.233 Sum_probs=56.9
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhhhcceEEEEeChhhHHHHHH
Q 045750 440 KDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERVKRATVLARLTPTQKLRVVQ 519 (792)
Q Consensus 440 r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~ 519 (792)
.+.+.+.++.+++.|+.+....|--.......-++.|++.-.. .++. .++.+.+ ++...+.+++.+.++
T Consensus 152 ~e~i~eiir~ik~~~l~i~~s~G~l~~E~l~~LkeAGld~~~~----~LeT-s~~~y~~------i~~~~s~e~rl~ti~ 220 (379)
T PLN02389 152 FNQILEYVKEIRGMGMEVCCTLGMLEKEQAAQLKEAGLTAYNH----NLDT-SREYYPN------VITTRSYDDRLETLE 220 (379)
T ss_pred HHHHHHHHHHHhcCCcEEEECCCCCCHHHHHHHHHcCCCEEEe----eecC-ChHHhCC------cCCCCCHHHHHHHHH
Confidence 5788899999999899988888877777777777888864211 1111 1222222 334458899999999
Q ss_pred HHhhcCCCEE---EEEcCCcc
Q 045750 520 SLQSVGKHVV---GFLGDGIN 537 (792)
Q Consensus 520 ~l~~~~~~~v---~~iGDg~N 537 (792)
..++.| -.| +++|-|..
T Consensus 221 ~a~~~G-i~v~sg~IiGlgEt 240 (379)
T PLN02389 221 AVREAG-ISVCSGGIIGLGEA 240 (379)
T ss_pred HHHHcC-CeEeEEEEECCCCC
Confidence 999987 443 33555443
No 304
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=22.56 E-value=3.8e+02 Score=28.10 Aligned_cols=48 Identities=25% Similarity=0.285 Sum_probs=38.8
Q ss_pred EecccCCCCChhHHHHHHHHHhC----CCeEEEEcCCC----HHHHHHHHHHhCCC
Q 045750 431 GLITFYDPPKDSAKQALWRLAKK----GVKAKLLTGDS----LSLAIKICHEVGIR 478 (792)
Q Consensus 431 G~i~~~d~~r~~~~~~I~~l~~~----Gi~v~~~Tgd~----~~~a~~ia~~~gi~ 478 (792)
|++.-...+-+++.++++.|.+. -|.++.+|.-. ...|..+...+|.+
T Consensus 44 GVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~ 99 (389)
T KOG1618|consen 44 GVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVE 99 (389)
T ss_pred cEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCc
Confidence 67777788999999999999998 89999998654 34566778888864
No 305
>PF14316 DUF4381: Domain of unknown function (DUF4381)
Probab=22.50 E-value=1.1e+02 Score=28.03 Aligned_cols=23 Identities=17% Similarity=0.273 Sum_probs=14.4
Q ss_pred ccccccChhHHHHHHHHHHHHHH
Q 045750 753 MGFTELPLTYFGFLLLLFIGYFT 775 (792)
Q Consensus 753 f~~~~l~~~~w~~~l~~~~~~l~ 775 (792)
-+.-|+.+.||++.+++.++++.
T Consensus 14 vswwP~a~GWwll~~lll~~~~~ 36 (146)
T PF14316_consen 14 VSWWPLAPGWWLLLALLLLLLIL 36 (146)
T ss_pred CCCCCccHHHHHHHHHHHHHHHH
Confidence 34557888888777665444433
No 306
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=22.17 E-value=5.5e+02 Score=29.15 Aligned_cols=74 Identities=18% Similarity=0.240 Sum_probs=45.3
Q ss_pred EEehHhHHHHHHHHhHHHHHHHHhccCCCCeEEEecCCccccCCeEEEEecCCCCCCcEEEECCCCeecccEEEEEeCC-
Q 045750 4 LVLISVCLRFYQEYGSSKAAMKLSEFVRCPIKVQRCAGRVVQSELIVQVDQRDVVPGDIVIFEPGDLFPGDVRLLTSKH- 82 (792)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~r~~~~~~~~g~~~~i~~~~lv~GDiI~l~~G~~iPaD~~ll~~~~- 82 (792)
++++..+..+.+.+.+.++.+.++++.... . +.+...+-. -| ...+...+..|-|.+++..++
T Consensus 2 i~~~~l~~~~~~~~~~~~~~~~~~~l~~~~---~--------~~~~~~v~r----~g-~~~V~~~~l~~GDiv~v~~G~~ 65 (499)
T TIGR01494 2 ILILVLLFALVEVAAKRAAEDAIRSLKDLL---V--------NPETVTVLR----NG-WKEIPASDLVPGDIVLVKSGEI 65 (499)
T ss_pred EEEhhHHHHHHHHHHHHHHHHHHHHHhhcc---C--------CCCeEEEEE----CC-eEEEEHHHCCCCCEEEECCCCE
Confidence 466777777777777777777777764311 1 111222211 23 677778888888888887444
Q ss_pred eEEEeccccCC
Q 045750 83 LVVSQSSLTGE 93 (792)
Q Consensus 83 ~~Vdes~ltGE 93 (792)
+-+|--.+.|+
T Consensus 66 iP~Dg~vl~g~ 76 (499)
T TIGR01494 66 VPADGVLLSGS 76 (499)
T ss_pred eeeeEEEEEcc
Confidence 55666666663
No 307
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=22.11 E-value=5.4e+02 Score=22.51 Aligned_cols=106 Identities=15% Similarity=0.090 Sum_probs=54.4
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC--ccccchhhhccCHHHHHHhh-hcceEEEEe--ChhhHHH
Q 045750 442 SAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTT--HVSTGPDLELLSQESFHERV-KRATVLARL--TPTQKLR 516 (792)
Q Consensus 442 ~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~--~~~~g~~~~~~~~~~~~~~~-~~~~v~~~~--~p~~K~~ 516 (792)
+..++++.+++++.-.+.-+|.....|..++..+..... ..+.+.+... ......- ....++... .+.+-.+
T Consensus 2 ~i~~~~~~i~~~~~i~i~g~g~s~~~a~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~iS~~g~~~~~~~ 78 (139)
T cd05013 2 ALEKAVDLLAKARRIYIFGVGSSGLVAEYLAYKLLRLGKPVVLLSDPHLQL---MSAANLTPGDVVIAISFSGETKETVE 78 (139)
T ss_pred HHHHHHHHHHhCCEEEEEEcCchHHHHHHHHHHHHHcCCceEEecCHHHHH---HHHHcCCCCCEEEEEeCCCCCHHHHH
Confidence 356788888888776777778777777777766533211 1111111100 0000111 122232222 2345566
Q ss_pred HHHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec
Q 045750 517 VVQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD 552 (792)
Q Consensus 517 iv~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~ 552 (792)
.++..+++|-+.+..+++.. .++-+.+|.-+-..
T Consensus 79 ~~~~a~~~g~~iv~iT~~~~--~~l~~~~d~~i~~~ 112 (139)
T cd05013 79 AAEIAKERGAKVIAITDSAN--SPLAKLADIVLLVS 112 (139)
T ss_pred HHHHHHHcCCeEEEEcCCCC--ChhHHhcCEEEEcC
Confidence 78888888734444445433 33445667666654
No 308
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=21.65 E-value=5e+02 Score=26.62 Aligned_cols=109 Identities=9% Similarity=-0.045 Sum_probs=60.7
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhccCHHHHHHhh-hcceEEEEeChhhH--HHH
Q 045750 441 DSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLELLSQESFHERV-KRATVLARLTPTQK--LRV 517 (792)
Q Consensus 441 ~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~~~~~~~~~~~-~~~~v~~~~~p~~K--~~i 517 (792)
+...++++.+++++.-.++-.|.+...|..++.++......+....+.... .......- ..+.++...+...+ .+.
T Consensus 116 ~~l~~~~~~i~~a~~I~i~G~G~s~~~A~~~~~~l~~~g~~~~~~~d~~~~-~~~~~~~~~~Dv~I~iS~sg~~~~~~~~ 194 (278)
T PRK11557 116 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGINAVAERDMHAL-LATVQALSPDDLLLAISYSGERRELNLA 194 (278)
T ss_pred HHHHHHHHHHhcCCeEEEEecChhHHHHHHHHHHHhhCCCeEEEcCChHHH-HHHHHhCCCCCEEEEEcCCCCCHHHHHH
Confidence 456778888888887777788888888888887765422111111111000 00111111 22334444444433 577
Q ss_pred HHHHhhcCCCEEEEEcCCcccHHHHHhCCeeEEec
Q 045750 518 VQSLQSVGKHVVGFLGDGINDSLALDAANVGISVD 552 (792)
Q Consensus 518 v~~l~~~~~~~v~~iGDg~ND~~~l~~A~vgia~~ 552 (792)
++..+++| -.|+++-|.. +.+.-+.||+-+...
T Consensus 195 ~~~ak~~g-a~iI~IT~~~-~s~la~~ad~~l~~~ 227 (278)
T PRK11557 195 ADEALRVG-AKVLAITGFT-PNALQQRASHCLYTI 227 (278)
T ss_pred HHHHHHcC-CCEEEEcCCC-CCchHHhCCEEEEeC
Confidence 78888888 5666666542 445556677777553
No 309
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=21.44 E-value=1.2e+02 Score=22.61 Aligned_cols=25 Identities=20% Similarity=0.371 Sum_probs=18.3
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCC
Q 045750 440 KDSAKQALWRLAKKGVKAKLLTGDS 464 (792)
Q Consensus 440 r~~~~~~I~~l~~~Gi~v~~~Tgd~ 464 (792)
.|+-++.++.|.++|++|-|.|-+.
T Consensus 1 d~~~qegLr~L~~aG~~v~iM~~~e 25 (55)
T PF05240_consen 1 DPDYQEGLRRLCQAGAQVSIMTYSE 25 (55)
T ss_dssp SHHHHHHHHHHHHTT-EEEE--HHH
T ss_pred CcHHHHHHHHHHHCCCeEEecCcHH
Confidence 3678899999999999999987543
No 310
>PRK05265 pyridoxine 5'-phosphate synthase; Provisional
Probab=20.97 E-value=1.4e+02 Score=29.75 Aligned_cols=47 Identities=32% Similarity=0.437 Sum_probs=39.0
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchh
Q 045750 440 KDSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPD 487 (792)
Q Consensus 440 r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~ 487 (792)
.+..++.|++|+++||+|-++= |+.......|+++|-+.-...+|..
T Consensus 112 ~~~l~~~i~~L~~~gIrVSLFi-dP~~~qi~~A~~~GAd~VELhTG~y 158 (239)
T PRK05265 112 FDKLKPAIARLKDAGIRVSLFI-DPDPEQIEAAAEVGADRIELHTGPY 158 (239)
T ss_pred HHHHHHHHHHHHHCCCEEEEEe-CCCHHHHHHHHHhCcCEEEEechhh
Confidence 4678899999999999998887 7888889999999987655556643
No 311
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=20.89 E-value=1.2e+02 Score=34.66 Aligned_cols=46 Identities=15% Similarity=0.364 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCccccchhhhc
Q 045750 441 DSAKQALWRLAKKGVKAKLLTGDSLSLAIKICHEVGIRTTHVSTGPDLEL 490 (792)
Q Consensus 441 ~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia~~~gi~~~~~~~g~~~~~ 490 (792)
+++.+.++++++.|+++++ ||. .+..+|+++|+..-.+.+++.+..
T Consensus 132 ~e~~~~~~~l~~~G~~~vi--G~~--~~~~~A~~~gl~~ili~s~esi~~ 177 (526)
T TIGR02329 132 EDARSCVNDLRARGIGAVV--GAG--LITDLAEQAGLHGVFLYSADSVRQ 177 (526)
T ss_pred HHHHHHHHHHHHCCCCEEE--CCh--HHHHHHHHcCCceEEEecHHHHHH
No 312
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=20.64 E-value=1e+02 Score=27.20 Aligned_cols=37 Identities=19% Similarity=0.220 Sum_probs=29.5
Q ss_pred CCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 045750 436 YDPPKDSAKQALWRLAKKGVKAKLLTGDSLSLAIKIC 472 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a~~ia 472 (792)
...-.++..+.++.+|+.|.+++.+|+.........+
T Consensus 62 ~sg~~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~~a 98 (131)
T PF01380_consen 62 YSGETRELIELLRFAKERGAPVILITSNSESPLARLA 98 (131)
T ss_dssp SSSTTHHHHHHHHHHHHTTSEEEEEESSTTSHHHHHS
T ss_pred ccccchhhhhhhHHHHhcCCeEEEEeCCCCCchhhhC
Confidence 4556788999999999999999999987765544443
No 313
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.54 E-value=1.8e+02 Score=30.04 Aligned_cols=43 Identities=33% Similarity=0.435 Sum_probs=25.4
Q ss_pred CCCCChhHHHHHHHHHh-CCCe---EEEEcCCCHHHH------HHHHHHhCCC
Q 045750 436 YDPPKDSAKQALWRLAK-KGVK---AKLLTGDSLSLA------IKICHEVGIR 478 (792)
Q Consensus 436 ~d~~r~~~~~~I~~l~~-~Gi~---v~~~Tgd~~~~a------~~ia~~~gi~ 478 (792)
..+++++.++-++.+++ .|++ .++.-||++.+. ...|+++|+.
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~Laii~vgdd~as~~Yv~~k~k~a~~~Gi~ 62 (281)
T PRK14183 10 SDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGIY 62 (281)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 34566777777777765 4554 345556665543 3346677773
No 314
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=20.31 E-value=1.8e+02 Score=25.71 Aligned_cols=28 Identities=18% Similarity=0.092 Sum_probs=24.3
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCHHHH
Q 045750 441 DSAKQALWRLAKKGVKAKLLTGDSLSLA 468 (792)
Q Consensus 441 ~~~~~~I~~l~~~Gi~v~~~Tgd~~~~a 468 (792)
++..++++.+++.|++++.+|++.....
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~~l 101 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANSPL 101 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCChh
Confidence 6789999999999999999999876433
No 315
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=20.19 E-value=5.1e+02 Score=26.17 Aligned_cols=84 Identities=15% Similarity=0.130 Sum_probs=60.0
Q ss_pred HHHhhccCeeEEEEEEecCCCc---cccCCC---------------------------CCCCCCCCcEEEEecccCCCCC
Q 045750 391 EELSNEGLRVIGVAVKRLLPQK---SAQSNR---------------------------NDGPIESDMVFLGLITFYDPPK 440 (792)
Q Consensus 391 ~~~~~~g~rvl~~a~~~~~~~~---~~~~~~---------------------------~~~~~e~~l~~lG~i~~~d~~r 440 (792)
+.+...|-.++-+|.|..+... ..-++. .++-...|+.=+=+++=.+.+.
T Consensus 27 ~ai~aSg~~ivTva~rR~~~~~~~~~~~~~~i~~~~~~~lpNTaG~~ta~eAv~~a~lare~~~~~~iKlEVi~d~~~Ll 106 (248)
T cd04728 27 EAIEASGAEIVTVALRRVNIGDPGGESFLDLLDKSGYTLLPNTAGCRTAEEAVRTARLAREALGTDWIKLEVIGDDKTLL 106 (248)
T ss_pred HHHHHhCCCEEEEEEEecccCCCCcchHHhhccccCCEECCCCCCCCCHHHHHHHHHHHHHHhCCCeEEEEEecCccccc
Confidence 4556778899999998875311 000000 0122356777777888888899
Q ss_pred hhHHHHHHHHHhC---CCeEEEEcCCCHHHHHHHHHH
Q 045750 441 DSAKQALWRLAKK---GVKAKLLTGDSLSLAIKICHE 474 (792)
Q Consensus 441 ~~~~~~I~~l~~~---Gi~v~~~Tgd~~~~a~~ia~~ 474 (792)
||..++++.+++. |..++-.+.|++..+++++.-
T Consensus 107 pd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 107 PDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred cCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 9999999999999 999996777778888887665
Done!