Query         045756
Match_columns 521
No_of_seqs    187 out of 1933
Neff          11.3
Searched_HMMs 46136
Date          Fri Mar 29 05:13:16 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045756.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045756hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.1E-83 2.4E-88  612.5  46.9  459   33-515    25-488 (489)
  2 PLN03112 cytochrome P450 famil 100.0 1.2E-81 2.7E-86  623.8  50.5  507    9-521     8-514 (514)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0   2E-81 4.3E-86  586.8  40.4  456   32-515    29-499 (499)
  4 PLN00110 flavonoid 3',5'-hydro 100.0 6.9E-80 1.5E-84  605.8  48.9  475   31-520    28-502 (504)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 6.2E-80 1.3E-84  610.2  48.1  479   32-520    32-514 (517)
  6 PLN02971 tryptophan N-hydroxyl 100.0 2.1E-79 4.6E-84  608.0  48.6  478   32-520    55-539 (543)
  7 PLN03234 cytochrome P450 83B1; 100.0 6.5E-79 1.4E-83  602.6  46.8  469   32-514    26-498 (499)
  8 PLN02183 ferulate 5-hydroxylas 100.0 1.7E-78 3.7E-83  599.7  46.4  468   32-514    34-511 (516)
  9 PLN02966 cytochrome P450 83A1  100.0 7.5E-77 1.6E-81  586.6  45.8  468   30-513    25-498 (502)
 10 PLN00168 Cytochrome P450; Prov 100.0 2.4E-76 5.1E-81  584.9  48.3  476   32-516    33-518 (519)
 11 PTZ00404 cytochrome P450; Prov 100.0   9E-77 1.9E-81  584.8  44.2  456   31-514    26-482 (482)
 12 PLN02394 trans-cinnamate 4-mon 100.0 1.7E-75 3.8E-80  578.8  46.3  470   31-515    27-502 (503)
 13 PLN02290 cytokinin trans-hydro 100.0   5E-75 1.1E-79  576.8  40.6  452   32-515    40-515 (516)
 14 PLN02655 ent-kaurene oxidase   100.0 1.1E-74 2.5E-79  565.7  41.9  457   36-516     1-465 (466)
 15 PLN03018 homomethionine N-hydr 100.0 1.9E-73   4E-78  560.8  48.6  479   34-520    40-529 (534)
 16 KOG0157 Cytochrome P450 CYP4/C 100.0 3.1E-75 6.8E-80  567.5  35.6  458   32-516    33-497 (497)
 17 KOG0159 Cytochrome P450 CYP11/ 100.0 2.1E-74 4.7E-79  525.9  37.7  458   34-516    50-519 (519)
 18 PLN02500 cytochrome P450 90B1  100.0   4E-73 8.6E-78  559.0  42.0  443   29-513    33-488 (490)
 19 PF00067 p450:  Cytochrome P450 100.0 9.1E-74   2E-78  567.0  29.5  456   36-511     1-463 (463)
 20 PLN03195 fatty acid omega-hydr 100.0 6.3E-72 1.4E-76  554.1  40.7  457   36-515    32-516 (516)
 21 PLN02169 fatty acid (omega-1)- 100.0 6.5E-72 1.4E-76  548.2  39.7  452   35-514    32-499 (500)
 22 PLN02774 brassinosteroid-6-oxi 100.0 5.5E-72 1.2E-76  546.4  38.6  430   32-513    29-462 (463)
 23 PLN02196 abscisic acid 8'-hydr 100.0 4.5E-71 9.9E-76  539.3  39.9  426   32-514    33-462 (463)
 24 PLN02738 carotene beta-ring hy 100.0 8.2E-71 1.8E-75  547.3  42.0  449   46-518   143-598 (633)
 25 KOG0684 Cytochrome P450 [Secon 100.0 4.8E-70   1E-74  484.5  35.4  448   35-515    32-485 (486)
 26 PLN02936 epsilon-ring hydroxyl 100.0 9.6E-70 2.1E-74  533.2  40.2  462   32-518    10-485 (489)
 27 PLN02302 ent-kaurenoic acid ox 100.0 2.1E-69 4.7E-74  535.3  42.7  439   31-516    39-489 (490)
 28 PLN03141 3-epi-6-deoxocathaste 100.0 1.8E-69 3.8E-74  527.6  39.6  438   31-516     4-451 (452)
 29 PLN02987 Cytochrome P450, fami 100.0 4.4E-69 9.5E-74  523.0  41.7  435   32-516    28-470 (472)
 30 PLN02426 cytochrome P450, fami 100.0 1.2E-67 2.6E-72  517.0  41.0  443   41-516    48-501 (502)
 31 PLN02648 allene oxide synthase 100.0 2.6E-59 5.7E-64  450.5  30.1  408   32-486    15-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 5.1E-55 1.1E-59  416.3  30.9  382   55-514    24-410 (411)
 33 PF12554 MOZART1:  Mitotic-spin  68.3      15 0.00032   22.8   4.0   44  302-345     5-48  (48)
 34 PF12508 DUF3714:  Protein of u  66.9     1.7 3.6E-05   36.7  -0.2   45  361-407    51-95  (200)
 35 PHA02681 ORF089 virion membran  58.6      59  0.0013   22.6   6.3   27    1-27      1-27  (92)
 36 PF05952 ComX:  Bacillus compet  55.1      13 0.00029   23.9   2.3   23  326-348     5-27  (57)
 37 PRK06789 flagellar motor switc  47.1      20 0.00043   24.7   2.4   40  368-407    21-62  (74)
 38 PF09201 SRX:  SRX;  InterPro:   42.9      24 0.00053   27.4   2.5   23  455-477    18-40  (148)
 39 KOG3653 Transforming growth fa  42.4      87  0.0019   30.5   6.5   47   54-101   210-258 (534)
 40 cd05024 S-100A10 S-100A10: A s  41.5      99  0.0022   22.4   5.3   38  280-317    46-83  (91)
 41 TIGR03779 Bac_Flav_CT_M Bacter  36.8      11 0.00024   35.8  -0.0   45  361-407   254-298 (410)
 42 COG0851 MinE Septum formation   36.5      62  0.0013   23.0   3.5   17  334-350    36-52  (88)
 43 COG4471 Uncharacterized protei  33.9 1.3E+02  0.0028   21.4   4.7   34   61-94     20-53  (90)
 44 PF11138 DUF2911:  Protein of u  33.4      51  0.0011   26.3   3.1   42  385-427    50-98  (145)
 45 KOG3506 40S ribosomal protein   31.6      21 0.00046   22.5   0.6   10  448-457    12-21  (56)
 46 PF14550 Peptidase_U35_2:  Puta  29.7      36 0.00078   26.2   1.7   23  385-407    71-93  (122)
 47 PF12273 RCR:  Chitin synthesis  29.0      64  0.0014   25.3   3.0   17    4-20      5-21  (130)
 48 PF15330 SIT:  SHP2-interacting  28.0 1.5E+02  0.0033   22.2   4.7   10   41-50     45-54  (107)
 49 PRK11677 hypothetical protein;  26.3      90   0.002   24.6   3.3   23    1-23      1-23  (134)
 50 PF14483 Cut8_M:  Cut8 dimerisa  26.1 1.1E+02  0.0024   17.9   2.9   17  326-342    18-35  (38)
 51 PF07886 BA14K:  BA14K-like pro  25.6      58  0.0013   18.0   1.5   16  443-458    16-31  (31)
 52 COG3423 Nlp Predicted transcri  25.3     6.3 0.00014   26.8  -2.6   31  396-434    44-74  (82)
 53 PRK02302 hypothetical protein;  25.3 2.3E+02  0.0049   20.5   4.8   34   61-94     21-54  (89)
 54 COG3763 Uncharacterized protei  24.2      86  0.0019   21.2   2.4   15    1-15      1-15  (71)
 55 PF05393 Hum_adeno_E3A:  Human   22.9 1.8E+02  0.0039   20.7   3.8    7   40-46     65-71  (94)
 56 PF11044 TMEMspv1-c74-12:  Plec  22.8 1.9E+02   0.004   17.4   3.3   14    1-14      1-14  (49)
 57 PRK02886 hypothetical protein;  22.7 2.8E+02   0.006   19.9   4.8   34   61-94     19-52  (87)
 58 PF07849 DUF1641:  Protein of u  22.4 1.2E+02  0.0026   18.2   2.6   19  323-341    12-30  (42)
 59 PRK05933 type III secretion sy  22.0      85  0.0018   28.7   2.7   44  364-407   316-362 (372)
 60 KOG0426 Ubiquitin-protein liga  22.0 2.3E+02   0.005   21.7   4.5   14  336-349     5-18  (165)
 61 PF04798 Baculo_19:  Baculoviru  21.1      40 0.00087   26.6   0.5   22  443-465    56-77  (146)
 62 PF15300 INT_SG_DDX_CT_C:  INTS  20.8      46 0.00099   22.3   0.7   15  362-376    40-54  (65)
 63 PRK13991 cell division topolog  20.2 2.3E+02   0.005   20.4   4.1   17  333-349    35-51  (87)
 64 PF13893 RRM_5:  RNA recognitio  20.1 2.4E+02  0.0051   17.6   4.5   34   60-93      2-39  (56)
 65 PRK14759 potassium-transportin  20.1 1.7E+02  0.0036   15.9   3.5   20    6-25      6-25  (29)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.1e-83  Score=612.51  Aligned_cols=459  Identities=43%  Similarity=0.800  Sum_probs=404.4

Q ss_pred             CCCCCCCCCCccccchhhcCCC-hhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcc-cceee
Q 045756           33 KRLPPGPPKLPIVGNLLQLSQL-PHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRT-LAAVH  110 (521)
Q Consensus        33 ~~~pp~p~~~p~~G~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~-~~~~~  110 (521)
                      .+.||||+++|++||++++... ++..++++.++|||++++++|..++|+|+|++.+++++.+++..|+.++.. .....
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            7779999999999999999776 999999999999999999999999999999999999999999999999872 23345


Q ss_pred             eccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHHHh
Q 045756          111 LAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTRML  190 (521)
Q Consensus       111 ~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~  190 (521)
                      ..+|..+.+++.+|+.|+.+||.....+++.+.+++....-.++++.+++.+.+ .+.+++||+...+..++.++|++++
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~~  183 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRML  183 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHHH
Confidence            566778889998999999999999999999999999988889999999999987 2223789999999999999999999


Q ss_pred             hcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccc-cccccC-CcchHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 045756          191 LGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLP-IWRWVD-PHGCEKKMREVEKRVDDFHTKIIEEHRKARKD  268 (521)
Q Consensus       191 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  268 (521)
                      ||.++...   +.+...++.....+.....+......++| ++.|+. ..+..++.+....++.++++..++++++.. +
T Consensus       184 fG~rf~~~---~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~  259 (489)
T KOG0156|consen  184 FGRRFEEE---DEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-G  259 (489)
T ss_pred             hCCccccC---CchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c
Confidence            99999753   22355668888888888888888888899 566665 335677888888889999999999988765 1


Q ss_pred             hccCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 045756          269 KRNSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDSVV  348 (521)
Q Consensus       269 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~  348 (521)
                            . . ++.|+++.++...++++++.+++++|.+.+.++++||+|||++|+.|++.+|++||++|+|+++||++++
T Consensus       260 ------~-~-~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vv  331 (489)
T KOG0156|consen  260 ------D-E-EGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVV  331 (489)
T ss_pred             ------c-C-CCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence                  1 1 1279999999987765534499999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCCCCCCCCc
Q 045756          349 GPNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDIEQFRPER  428 (521)
Q Consensus       349 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R  428 (521)
                      |.++.++.+|+.+||||+|||+||+|+||++|+.++|.+++|+.|+||.|||||.|+++.|++||||++|+||++|+|||
T Consensus       332 G~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PER  411 (489)
T KOG0156|consen  332 GKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPER  411 (489)
T ss_pred             CCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhh
Confidence            98888999999999999999999999999999989999999999999999999999999999999999999999999999


Q ss_pred             cccCC-CCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccCCc
Q 045756          429 HWLAD-GSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPKAQPL  507 (521)
Q Consensus       429 f~~~~-~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (521)
                      |++++ +      +.....++|||.|.|+|||..+|.+++.++++.|+++|+|++..+    .++..+. +.++..+.++
T Consensus       412 Fl~~~d~------~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~-~~~~~~~~pl  480 (489)
T KOG0156|consen  412 FLDSNDG------KGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEA-GLTLKKKKPL  480 (489)
T ss_pred             hcCCccc------cCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCccc-ccceecCCcc
Confidence            99763 2      225679999999999999999999999999999999999998866    3455555 3667777788


Q ss_pred             eeeecccC
Q 045756          508 LALPRPRL  515 (521)
Q Consensus       508 ~~~~~~r~  515 (521)
                      .+...+|.
T Consensus       481 ~~~~~~r~  488 (489)
T KOG0156|consen  481 KAVPVPRL  488 (489)
T ss_pred             eeeeecCC
Confidence            88887774


No 2  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.2e-81  Score=623.77  Aligned_cols=507  Identities=83%  Similarity=1.365  Sum_probs=404.5

Q ss_pred             HHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCccccchhhcCCChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHH
Q 045756            9 ILLFSSIIADIIRRFQNQKFFHQTKRLPPGPPKLPIVGNLLQLSQLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDII   88 (521)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~p~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i   88 (521)
                      +++++.++.+++|++.++.. ..+.+.||||+++|++|++..+..+++..+.+++++||++|++++++.+.++++||+++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~-~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~   86 (514)
T PLN03112          8 LLFSVLIFNVLIWRWLNASM-RKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELI   86 (514)
T ss_pred             HHHHHHHHHHHHHHHccccc-cCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHH
Confidence            33333333444455544433 33445699999999999999887788999999999999999999999999999999999


Q ss_pred             HHHHHhcCcccccCCcccceeeeccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccC
Q 045756           89 REILLRQDEVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQS  168 (521)
Q Consensus        89 ~~il~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~  168 (521)
                      ++++.++.+.|++++.........+|.+.+++..+|+.|+++|+.+.++.|+.++++.+.+.+.+.++.+++.+++...+
T Consensus        87 ~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~  166 (514)
T PLN03112         87 REILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQT  166 (514)
T ss_pred             HHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhcc
Confidence            99998888888877654333333455556677888999999999976678999999999999999999999988765445


Q ss_pred             CCceehHHHHHHHHHHHHHHHhhcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHH
Q 045756          169 GKPVNLRDVLGAFSMNNVTRMLLGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVE  248 (521)
Q Consensus       169 ~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  248 (521)
                      ++++|+.+.++.+++++++.++||.++........+....+......+...........++|.+.++.+.+..++.+++.
T Consensus       167 ~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  246 (514)
T PLN03112        167 GKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVE  246 (514)
T ss_pred             CCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHH
Confidence            67899999999999999999999998743221111234456665555544333233344567665554444456777888


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhccCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHH
Q 045756          249 KRVDDFHTKIIEEHRKARKDKRNSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMA  328 (521)
Q Consensus       249 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~  328 (521)
                      +.+.+++...++++++.....     .......|+++.++++..++++..++++++.+++..+++||+|||+++++|+++
T Consensus       247 ~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~  321 (514)
T PLN03112        247 KRVDEFHDKIIDEHRRARSGK-----LPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMA  321 (514)
T ss_pred             HHHHHHHHHHHHHHHHhhccc-----ccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence            889999999998877653211     011234689999998654443345899999999999999999999999999999


Q ss_pred             HHhhChHHHHHHHHHHHHhhCCCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeee
Q 045756          329 EVIKHPRILRKIQEELDSVVGPNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINT  408 (521)
Q Consensus       329 ~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~  408 (521)
                      +|++||++|+|||+|+++++++++.++++++++||||+|||+||||+||+++.+++|.+.+|+.++|+.|||||.|.+++
T Consensus       322 ~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~  401 (514)
T PLN03112        322 EVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINT  401 (514)
T ss_pred             HHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEeh
Confidence            99999999999999999999877779999999999999999999999999998678999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 045756          409 HGLGRNTRIWNDIEQFRPERHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRP  488 (521)
Q Consensus       409 ~~~~~d~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~  488 (521)
                      +++||||++||||++|+||||+.+.++...........|+|||.|+|.|+|++||+.|++++++.||++|+|++.++..+
T Consensus       402 ~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~  481 (514)
T PLN03112        402 HGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRP  481 (514)
T ss_pred             HHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCc
Confidence            99999999999999999999986433221111234568999999999999999999999999999999999998765333


Q ss_pred             CcccccccccccccccCCceeeecccCCCCCCC
Q 045756          489 EDIDTSEVYGMTMPKAQPLLALPRPRLADHMYH  521 (521)
Q Consensus       489 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~  521 (521)
                      ++......+++++++.+++++++++|..++.|.
T Consensus       482 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~  514 (514)
T PLN03112        482 EDIDTQEVYGMTMPKAKPLRAVATPRLAPHLYG  514 (514)
T ss_pred             ccCCCccccCcccccCCCeEEEeecCCcccccC
Confidence            334444455677778889999999999999883


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2e-81  Score=586.78  Aligned_cols=456  Identities=25%  Similarity=0.389  Sum_probs=360.0

Q ss_pred             CCCCCCCCCCCccccchhhcC--CChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCC--cccc
Q 045756           32 TKRLPPGPPKLPIVGNLLQLS--QLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRP--RTLA  107 (521)
Q Consensus        32 ~~~~pp~p~~~p~~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~--~~~~  107 (521)
                      .++.+|+|++.|++|++..+.  +.+.....+.+.++|+++.++.+.++.++|.|||+|++|+.+..++|..+.  ....
T Consensus        29 ~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d  108 (499)
T KOG0158|consen   29 RRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGD  108 (499)
T ss_pred             ccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCC
Confidence            333588999999999999882  233555555555569999999999999999999999999999999998843  2222


Q ss_pred             eeeeccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHH
Q 045756          108 AVHLAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVT  187 (521)
Q Consensus       108 ~~~~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~  187 (521)
                      ...  .-....+|...|+.||++|..+ .+.|+.+.++++.+.+.+.++++++.+.++...+..+++.+.+..++.|+|+
T Consensus       109 ~~~--~l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~  185 (499)
T KOG0158|consen  109 PED--PLSALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIG  185 (499)
T ss_pred             CCC--cccccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHh
Confidence            111  1112557788899999999998 5999999999999999999999999998865433678999999999999999


Q ss_pred             HHhhcceecCCCCCChhHHHHHHHHHHHHHHHhh-hc----ccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 045756          188 RMLLGKQYFGGGSAGPEEAMEFMHITHELFRLLG-VI----YLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEH  262 (521)
Q Consensus       188 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  262 (521)
                      .++||.+.++..    +....|............ ..    .....+|.+....      +.........+++.+.+..+
T Consensus       186 ~~AfG~~~~s~~----d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l------~~~~~~~~~~~~~~~~v~~~  255 (499)
T KOG0158|consen  186 SCAFGLDANSLR----DPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL------RVKLFPEDVTDFFRKLVNSR  255 (499)
T ss_pred             Hhhcccchhhhc----CchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh------hcccChHHHHHHHHHHHHHH
Confidence            999999987754    233444443333333311 11    1111223222211      11222334445555555555


Q ss_pred             HHhhhhhccCCCccCCccchHHHHHhcCCCC--CC--CC-CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHH
Q 045756          263 RKARKDKRNSVNEEDGEAMDFVDVLLSLPGE--NG--KE-HMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRIL  337 (521)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~--~~-~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q  337 (521)
                      .+.++.       .+..+.|+++.++++..+  .+  .. .+|.+||+++++.|++||.||||+++++++|+||+|||+|
T Consensus       256 v~~R~~-------~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ  328 (499)
T KOG0158|consen  256 VEQREK-------ENIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQ  328 (499)
T ss_pred             HHHHHh-------cCCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHH
Confidence            544422       335678999999998753  11  12 5999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhCCCCCCCcccCCCCccHHHHHHhhhcCCCCCccccccccccccccc-ceeeCCCCEEEeeeccccCCCC
Q 045756          338 RKIQEELDSVVGPNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTIN-GYHIPAKTRVFINTHGLGRNTR  416 (521)
Q Consensus       338 ~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~-g~~ip~G~~v~~~~~~~~~d~~  416 (521)
                      +|||+||++++.+...+++|.+.+|+||++||+||||+||+++. ..|.+++|++++ ++.||||+.|+++++++||||+
T Consensus       329 ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~  407 (499)
T KOG0158|consen  329 DKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPE  407 (499)
T ss_pred             HHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeecccccCCcc
Confidence            99999999998765559999999999999999999999999999 899999999999 9999999999999999999999


Q ss_pred             CCCCCCCCCCCccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccc
Q 045756          417 IWNDIEQFRPERHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEV  496 (521)
Q Consensus       417 ~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  496 (521)
                      +||||++|+||||..++.+     ...++.|+|||.|||+|+|++||++|+|+.|++||++|++++.+...+.  .....
T Consensus       408 ~~p~Pe~F~PERF~~~~~~-----~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~--~~~~~  480 (499)
T KOG0158|consen  408 YWPEPEKFKPERFEEENNK-----SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIP--LEGDP  480 (499)
T ss_pred             cCCCcccCCCccCCCCccc-----ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCc--ccCCc
Confidence            9999999999999854433     3467899999999999999999999999999999999999988743222  22222


Q ss_pred             ccccccccCCceeeecccC
Q 045756          497 YGMTMPKAQPLLALPRPRL  515 (521)
Q Consensus       497 ~~~~~~~~~~~~~~~~~r~  515 (521)
                      .+.++.|.+++++++.+|.
T Consensus       481 ~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  481 KGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             cceeeecCCceEEEEEeCC
Confidence            3677899999999999984


No 4  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=6.9e-80  Score=605.83  Aligned_cols=475  Identities=36%  Similarity=0.709  Sum_probs=385.7

Q ss_pred             CCCCCCCCCCCCccccchhhcCCChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccceee
Q 045756           31 QTKRLPPGPPKLPIVGNLLQLSQLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAAVH  110 (521)
Q Consensus        31 ~~~~~pp~p~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~  110 (521)
                      ...+.||||+++|++|++..+..+++.++.+++++||++|++++++.++++|+||+++++++.++...|++++.......
T Consensus        28 ~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~  107 (504)
T PLN00110         28 PSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATH  107 (504)
T ss_pred             ccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhh
Confidence            35667999999999999887776789999999999999999999999999999999999999888778877764332222


Q ss_pred             eccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHHHh
Q 045756          111 LAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTRML  190 (521)
Q Consensus       111 ~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~  190 (521)
                      ...|.++++++.+|+.|+++|+.+..+.|+.+.++.+.+.+.+++..+++.+.+...+++++|+.+++..+++|+++.++
T Consensus       108 ~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~  187 (504)
T PLN00110        108 LAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVI  187 (504)
T ss_pred             hccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHH
Confidence            23444567888889999999999965689999999999999999999999987655456789999999999999999999


Q ss_pred             hcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 045756          191 LGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRKARKDKR  270 (521)
Q Consensus       191 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  270 (521)
                      ||.++...   ......++...............+..++|++.|+......++.++..+.+.+++.+.++++++...   
T Consensus       188 fg~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---  261 (504)
T PLN00110        188 LSRRVFET---KGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAH---  261 (504)
T ss_pred             hCCccccc---CchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcc---
Confidence            99987321   111334566666555443333223345666555443333456666778888888888887765431   


Q ss_pred             cCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhCC
Q 045756          271 NSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDSVVGP  350 (521)
Q Consensus       271 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~  350 (521)
                           ......|+++.+++......+..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|+++++++
T Consensus       262 -----~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  336 (504)
T PLN00110        262 -----ERKGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGR  336 (504)
T ss_pred             -----ccccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence                 111245899999976543333569999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCCCCCCCCccc
Q 045756          351 NRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDIEQFRPERHW  430 (521)
Q Consensus       351 ~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~Rf~  430 (521)
                      ++.++++++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|+++.+++||||++||||++|+||||+
T Consensus       337 ~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl  416 (504)
T PLN00110        337 NRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFL  416 (504)
T ss_pred             CCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCccccc
Confidence            77789999999999999999999999999986789999999999999999999999999999999999999999999998


Q ss_pred             cCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccCCceee
Q 045756          431 LADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPKAQPLLAL  510 (521)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (521)
                      .++...... ......|+|||.|+|.|+|++||+.|++++|++|+++|+|++.++.   +.+.....++++.|..++.++
T Consensus       417 ~~~~~~~~~-~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  492 (504)
T PLN00110        417 SEKNAKIDP-RGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV---ELNMDEAFGLALQKAVPLSAM  492 (504)
T ss_pred             CCCCccccc-CCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC---ccCcccccccccccCCCceEe
Confidence            543221110 1123589999999999999999999999999999999999987653   223233456778888999999


Q ss_pred             ecccCCCCCC
Q 045756          511 PRPRLADHMY  520 (521)
Q Consensus       511 ~~~r~~~~~~  520 (521)
                      +++|.+++-|
T Consensus       493 ~~~r~~~~~~  502 (504)
T PLN00110        493 VTPRLHQSAY  502 (504)
T ss_pred             eccCCCchhc
Confidence            9999888877


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=6.2e-80  Score=610.16  Aligned_cols=479  Identities=39%  Similarity=0.750  Sum_probs=384.3

Q ss_pred             CCCCCCCCCCCccccchhhcCCChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccceeee
Q 045756           32 TKRLPPGPPKLPIVGNLLQLSQLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAAVHL  111 (521)
Q Consensus        32 ~~~~pp~p~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~~  111 (521)
                      ..+.||||.++|++|++..+..+++..+.+++++||++|++++++.++++++||+++++++.++.+.|.+++........
T Consensus        32 ~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~  111 (517)
T PLN02687         32 KRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHM  111 (517)
T ss_pred             CCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhh
Confidence            44568999999999999888778999999999999999999999999999999999999998877778776543322222


Q ss_pred             ccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHHHhh
Q 045756          112 AYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTRMLL  191 (521)
Q Consensus       112 ~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~f  191 (521)
                      ...+++.+++.+|+.|+++|+.+..+.|+.++++.+.+.+.++++++++.+.... +++++|+.++++.+++|+++..+|
T Consensus       112 ~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~~~vd~~~~~~~~t~dvi~~~~f  190 (517)
T PLN02687        112 AYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH-GTAPVNLGQLVNVCTTNALGRAMV  190 (517)
T ss_pred             ccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHHHHh
Confidence            2223466788889999999999865789999999999999999999999987542 356799999999999999999999


Q ss_pred             cceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 045756          192 GKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRKARKDKRN  271 (521)
Q Consensus       192 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  271 (521)
                      |.++.....  .+....+.+....+....+......++|++.|+......++..+..+.+.+++.++++++++....   
T Consensus       191 G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---  265 (517)
T PLN02687        191 GRRVFAGDG--DEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQT---  265 (517)
T ss_pred             CccccccCC--cchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccc---
Confidence            998754321  123345666555555443322223445655555433334566777888888999999887765311   


Q ss_pred             CCCccCCccchHHHHHhcCCCCC----CCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 045756          272 SVNEEDGEAMDFVDVLLSLPGEN----GKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDSV  347 (521)
Q Consensus       272 ~~~~~~~~~~d~l~~ll~~~~~~----~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~  347 (521)
                          ++....|+++.+++...++    .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       266 ----~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~  341 (517)
T PLN02687        266 ----GSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAV  341 (517)
T ss_pred             ----cCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence                1123468999999875432    12459999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCCCCCCCC
Q 045756          348 VGPNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDIEQFRPE  427 (521)
Q Consensus       348 ~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~  427 (521)
                      ++.++.++++++++||||+|||+||||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||
T Consensus       342 ~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~Pe  421 (517)
T PLN02687        342 VGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPD  421 (517)
T ss_pred             cCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCch
Confidence            88777789999999999999999999999999976799999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccCCc
Q 045756          428 RHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPKAQPL  507 (521)
Q Consensus       428 Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (521)
                      ||+++..+........+..|+|||+|+|.|+|++||..|+++++++||++|+|++.++..+++.+....+++++.+..++
T Consensus       422 Rfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (517)
T PLN02687        422 RFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPL  501 (517)
T ss_pred             hcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCe
Confidence            99864321110002245689999999999999999999999999999999999988664333333334445566677789


Q ss_pred             eeeecccCCCCCC
Q 045756          508 LALPRPRLADHMY  520 (521)
Q Consensus       508 ~~~~~~r~~~~~~  520 (521)
                      .+++++|.-++-|
T Consensus       502 ~~~~~~R~~~~~~  514 (517)
T PLN02687        502 MVHPRPRLLPSAY  514 (517)
T ss_pred             EEeeccCCChhhc
Confidence            9999999644444


No 6  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=2.1e-79  Score=607.99  Aligned_cols=478  Identities=35%  Similarity=0.626  Sum_probs=372.9

Q ss_pred             CCCCCCCCCCCccccchhhcCCC--hhHHHHHHHHHhC-CeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccce
Q 045756           32 TKRLPPGPPKLPIVGNLLQLSQL--PHRDLASLCDKYG-PLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAA  108 (521)
Q Consensus        32 ~~~~pp~p~~~p~~G~~~~~~~~--~~~~~~~~~~kyG-~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~  108 (521)
                      +.+.||||+++|++|++..+..+  .+..+.++.++|| ++|++++|+.++++|+||+++++++.++...|.+++.....
T Consensus        55 ~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~  134 (543)
T PLN02971         55 LHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQ  134 (543)
T ss_pred             CCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccch
Confidence            45679999999999999887433  3677899999999 79999999999999999999999999888888887643322


Q ss_pred             eeeccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHH
Q 045756          109 VHLAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTR  188 (521)
Q Consensus       109 ~~~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~  188 (521)
                      .....|.+++++..+|+.|+++|+.+...+++....+.+.+.+.++++.+++.+.+...+++++|+.+.++.+++++++.
T Consensus       135 ~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  214 (543)
T PLN02971        135 KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKR  214 (543)
T ss_pred             hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHH
Confidence            22223333467888899999999999767787777778888888888888877765444456799999999999999999


Q ss_pred             HhhcceecCCCCC-ChhHHHHHHHHHHHHHHHhh---hcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 045756          189 MLLGKQYFGGGSA-GPEEAMEFMHITHELFRLLG---VIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRK  264 (521)
Q Consensus       189 ~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  264 (521)
                      ++||.++.+.... .++...++......+.....   ...+..++|++.+++..+..+..+++.+.+.+++.+.++++++
T Consensus       215 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  294 (543)
T PLN02971        215 LMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIK  294 (543)
T ss_pred             HHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999987431100 00111122223333332211   1122344565544422223455666777888889999988765


Q ss_pred             hhhhhccCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHH
Q 045756          265 ARKDKRNSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEEL  344 (521)
Q Consensus       265 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei  344 (521)
                      ..+.+      ......|+++.|++..++++...++++++.+++.++++||+|||+++++|++++|+.||++|+|+|+||
T Consensus       295 ~~~~~------~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI  368 (543)
T PLN02971        295 MWREG------KRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEI  368 (543)
T ss_pred             HHhcc------CCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            43211      111246899999986543322349999999999999999999999999999999999999999999999


Q ss_pred             HHhhCCCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCCCCC
Q 045756          345 DSVVGPNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDIEQF  424 (521)
Q Consensus       345 ~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  424 (521)
                      ++++++++.++++++.+||||+|||+||||+||+++..++|.+.+|+.++||.||||+.|+++.+++||||++|+||++|
T Consensus       369 ~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F  448 (543)
T PLN02971        369 DRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSF  448 (543)
T ss_pred             HHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCcccc
Confidence            99998778899999999999999999999999999987789999999999999999999999999999999999999999


Q ss_pred             CCCccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccccccccccc
Q 045756          425 RPERHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPKA  504 (521)
Q Consensus       425 ~p~Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (521)
                      +||||+.+.++.. . ...+..|+|||.|+|.|+|++||+.|++++++.||++|+|++.++.  .+.++.+.++ ++..+
T Consensus       449 ~PeRfl~~~~~~~-~-~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~-~~~~~  523 (543)
T PLN02971        449 KPERHLNECSEVT-L-TENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSE--TRVELMESSH-DMFLS  523 (543)
T ss_pred             CcccCCCCCcccc-c-cCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCC--CCcchhhhcC-ccccc
Confidence            9999985432210 0 1245689999999999999999999999999999999999987653  2355666666 66455


Q ss_pred             CCceeeecccCCCCCC
Q 045756          505 QPLLALPRPRLADHMY  520 (521)
Q Consensus       505 ~~~~~~~~~r~~~~~~  520 (521)
                      +++.+.+++|-..++|
T Consensus       524 ~~~~~~~~~~~~~~~~  539 (543)
T PLN02971        524 KPLVMVGELRLSEDLY  539 (543)
T ss_pred             ccceeeeeecCCcccc
Confidence            6899999999666666


No 7  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=6.5e-79  Score=602.63  Aligned_cols=469  Identities=31%  Similarity=0.618  Sum_probs=376.4

Q ss_pred             CCCCCCCCCCCccccchhhcCC-ChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccceee
Q 045756           32 TKRLPPGPPKLPIVGNLLQLSQ-LPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAAVH  110 (521)
Q Consensus        32 ~~~~pp~p~~~p~~G~~~~~~~-~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~  110 (521)
                      +.+.||||+++|++|++..+.. ++..++.+++++||++|++++++.++++++||+++++|+.++...|..++.......
T Consensus        26 ~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~  105 (499)
T PLN03234         26 SLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQT  105 (499)
T ss_pred             CCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhh
Confidence            4566999999999999988854 788899999999999999999999999999999999999888777877764322211


Q ss_pred             eccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHHHh
Q 045756          111 LAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTRML  190 (521)
Q Consensus       111 ~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~  190 (521)
                      ..+.+....+...++.|+++|+.+..++|+.++++.+.+.+.+.++++++.+.+...+++++|+.+.+..+++|+++.++
T Consensus       106 ~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~  185 (499)
T PLN03234        106 MSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQA  185 (499)
T ss_pred             hccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHHH
Confidence            12212233455668899999998656899999999999999999999999997655556789999999999999999999


Q ss_pred             hcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccC-CcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 045756          191 LGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVD-PHGCEKKMREVEKRVDDFHTKIIEEHRKARKDK  269 (521)
Q Consensus       191 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  269 (521)
                      ||.++...    .....++.+.........+.......+|++.++. ..+..++..++.+++.+++.++++++++...  
T Consensus       186 fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--  259 (499)
T PLN03234        186 FGKRYNEY----GTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNR--  259 (499)
T ss_pred             hCCccccc----chhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc--
Confidence            99987642    1123445444444433322222233345433221 1223467788899999999999988764421  


Q ss_pred             ccCCCccCCccchHHHHHhcCCCCCC-CCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 045756          270 RNSVNEEDGEAMDFVDVLLSLPGENG-KEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDSVV  348 (521)
Q Consensus       270 ~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~  348 (521)
                            ......|+++.|++..++++ ...++++++.+++.++++||+|||+++++|++++|++||++|+|+|+|+++++
T Consensus       260 ------~~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~  333 (499)
T PLN03234        260 ------PKQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVI  333 (499)
T ss_pred             ------cCCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence                  11234688998887544322 23589999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCC-CCCCCCCCC
Q 045756          349 GPNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIW-NDIEQFRPE  427 (521)
Q Consensus       349 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~  427 (521)
                      ++.+.++++++.+||||+|||+||||++|++++.+.|.+.+|++++||.|||||.|+++.+++||||++| |||++|+||
T Consensus       334 ~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~Pe  413 (499)
T PLN03234        334 GDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPE  413 (499)
T ss_pred             CCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCch
Confidence            8767789999999999999999999999999985689999999999999999999999999999999999 899999999


Q ss_pred             ccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccCCc
Q 045756          428 RHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPKAQPL  507 (521)
Q Consensus       428 Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (521)
                      ||+++.++..  .+..+..|+|||.|+|.|+|+++|+.|++++++.|+++|+|++.++..+........++++..+++.+
T Consensus       414 R~l~~~~~~~--~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (499)
T PLN03234        414 RFMKEHKGVD--FKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHL  491 (499)
T ss_pred             hhcCCCCCcC--cCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCe
Confidence            9985432211  02345689999999999999999999999999999999999998765445555555668888888888


Q ss_pred             eeeeccc
Q 045756          508 LALPRPR  514 (521)
Q Consensus       508 ~~~~~~r  514 (521)
                      .+.+++|
T Consensus       492 ~~~~~~~  498 (499)
T PLN03234        492 VLAPTKH  498 (499)
T ss_pred             EEEeecC
Confidence            8888876


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1.7e-78  Score=599.73  Aligned_cols=468  Identities=38%  Similarity=0.756  Sum_probs=369.7

Q ss_pred             CCCCCCCCCCCccccchhhcCCChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccceeee
Q 045756           32 TKRLPPGPPKLPIVGNLLQLSQLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAAVHL  111 (521)
Q Consensus        32 ~~~~pp~p~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~~  111 (521)
                      ..+.||||+++|++|+++.+...++.++.+++++||++|++++++.++++++||+++++|+.++...|+.++........
T Consensus        34 ~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~  113 (516)
T PLN02183         34 RLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYL  113 (516)
T ss_pred             CCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhcc
Confidence            45679999999999999877656678899999999999999999999999999999999998877777766543222222


Q ss_pred             ccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHHHhh
Q 045756          112 AYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTRMLL  191 (521)
Q Consensus       112 ~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~f  191 (521)
                      ..+.++++++.+|+.|+++|+.+..+.|+.+.++.+.+. .++++.+++.+...  .++++|+.+.+..+++++++.++|
T Consensus       114 ~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~--~~~~v~~~~~~~~~~~~vi~~~~f  190 (516)
T PLN02183        114 TYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN--IGKPVNIGELIFTLTRNITYRAAF  190 (516)
T ss_pred             ccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc--CCCcEeHHHHHHHHHHHHHHhHhh
Confidence            222346688888999999999965688999999988875 56788899888642  366899999999999999999999


Q ss_pred             cceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 045756          192 GKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRKARKDKRN  271 (521)
Q Consensus       192 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  271 (521)
                      |.+...       ....+.+....+...........++|++.++.+....++..+..+.+.+++.+++++++++.+... 
T Consensus       191 G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-  262 (516)
T PLN02183        191 GSSSNE-------GQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQN-  262 (516)
T ss_pred             cCcccc-------hHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-
Confidence            987642       223455555444443332223345566555433334567777888899999999988776542211 


Q ss_pred             CCCccCCccchHHHHHhcCCCCC----------CCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHH
Q 045756          272 SVNEEDGEAMDFVDVLLSLPGEN----------GKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQ  341 (521)
Q Consensus       272 ~~~~~~~~~~d~l~~ll~~~~~~----------~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr  341 (521)
                      ..........|+++.+++...++          ....++++++.+++.++++||+|||+++++|++++|++||++|+|+|
T Consensus       263 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~  342 (516)
T PLN02183        263 ADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQ  342 (516)
T ss_pred             cccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHH
Confidence            00001113458999999754321          11258999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCC
Q 045756          342 EELDSVVGPNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDI  421 (521)
Q Consensus       342 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p  421 (521)
                      +|++++++.++.++++++.+||||+|||+||||++|+++. ..|.+.+|++++||.|||||.|+++.+++||||++||||
T Consensus       343 ~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~-~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP  421 (516)
T PLN02183        343 QELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPL-LLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDP  421 (516)
T ss_pred             HHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccc-eeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCc
Confidence            9999999866678999999999999999999999999999 679999999999999999999999999999999999999


Q ss_pred             CCCCCCccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccc
Q 045756          422 EQFRPERHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTM  501 (521)
Q Consensus       422 ~~F~p~Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  501 (521)
                      ++|+||||+.++.+..   ....+.|+|||.|+|+|+|++||+.|+++++|+|+++|++++.++..++..+....++.+.
T Consensus       422 ~~F~PeRfl~~~~~~~---~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  498 (516)
T PLN02183        422 DTFKPSRFLKPGVPDF---KGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTA  498 (516)
T ss_pred             cccCchhhCCCCCccc---cCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhcccccc
Confidence            9999999985332111   1245689999999999999999999999999999999999987764333334333445555


Q ss_pred             cccCCceeeeccc
Q 045756          502 PKAQPLLALPRPR  514 (521)
Q Consensus       502 ~~~~~~~~~~~~r  514 (521)
                      .+..++.+.+++|
T Consensus       499 ~~~~~~~~~~~~r  511 (516)
T PLN02183        499 PRATRLVAVPTYR  511 (516)
T ss_pred             ccCCCcEEEeecC
Confidence            5556788888888


No 9  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=7.5e-77  Score=586.64  Aligned_cols=468  Identities=31%  Similarity=0.605  Sum_probs=362.8

Q ss_pred             cCCCCCCCCCCCCccccchhhc-CCChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccce
Q 045756           30 HQTKRLPPGPPKLPIVGNLLQL-SQLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAA  108 (521)
Q Consensus        30 ~~~~~~pp~p~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~  108 (521)
                      +...+.||||+++|++|+++.+ ..++..++.+++++||++|++++++.++++++||+.+++++.++...|.+++.....
T Consensus        25 ~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~  104 (502)
T PLN02966         25 TKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGH  104 (502)
T ss_pred             cCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccc
Confidence            3345679999999999999887 446899999999999999999999999999999999999998776666655433222


Q ss_pred             eeeccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHH
Q 045756          109 VHLAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTR  188 (521)
Q Consensus       109 ~~~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~  188 (521)
                      .....|.+...+..+|+.|+++|+.+..++|+.++++.+.+.+.++++++++.+.+...+++.+|+.+++..+++|+++.
T Consensus       105 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~  184 (502)
T PLN02966        105 EFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCR  184 (502)
T ss_pred             eeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHH
Confidence            22223433445666799999999995578999999999999999999999999976554566899999999999999999


Q ss_pred             HhhcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccCC-cchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 045756          189 MLLGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVDP-HGCEKKMREVEKRVDDFHTKIIEEHRKARK  267 (521)
Q Consensus       189 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  267 (521)
                      ++||.+++..    .+....+.+.............+..++|++..+.. .+..+....+.+...+++.+.++++.....
T Consensus       185 ~~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  260 (502)
T PLN02966        185 QAFGKKYNED----GEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKR  260 (502)
T ss_pred             HHhCCccCcc----chHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            9999988642    12233444444443333332223334443222111 111233344556677777777776544321


Q ss_pred             hhccCCCccCCccchHHHHHhcCCCCCC-CCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 045756          268 DKRNSVNEEDGEAMDFVDVLLSLPGENG-KEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDS  346 (521)
Q Consensus       268 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~  346 (521)
                              ......|+++.+++..++.. +..++++++.++++++++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       261 --------~~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~  332 (502)
T PLN02966        261 --------VKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVRE  332 (502)
T ss_pred             --------cccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence                    11123589999987654432 245899999999999999999999999999999999999999999999999


Q ss_pred             hhCCC--CCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCC-CCCCC
Q 045756          347 VVGPN--RMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIW-NDIEQ  423 (521)
Q Consensus       347 ~~~~~--~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~  423 (521)
                      +++++  +.++++++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|+++++++||||++| |||++
T Consensus       333 v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~  412 (502)
T PLN02966        333 YMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDE  412 (502)
T ss_pred             HhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhh
Confidence            98742  3578999999999999999999999999986689999999999999999999999999999999999 99999


Q ss_pred             CCCCccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccc
Q 045756          424 FRPERHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPK  503 (521)
Q Consensus       424 F~p~Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  503 (521)
                      |+||||+++..+.    ...+..|+|||+|+|+|+|++||..|++++++.||++|+|++.++..++..+....+|++..+
T Consensus       413 F~PeRwl~~~~~~----~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~  488 (502)
T PLN02966        413 FRPERFLEKEVDF----KGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHK  488 (502)
T ss_pred             CChhhhcCCCCCc----CCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeecc
Confidence            9999998533211    124568999999999999999999999999999999999998877544444444445655545


Q ss_pred             cCCceeeecc
Q 045756          504 AQPLLALPRP  513 (521)
Q Consensus       504 ~~~~~~~~~~  513 (521)
                      +..++++.++
T Consensus       489 ~~~~~~~~~~  498 (502)
T PLN02966        489 SQHLKLVPEK  498 (502)
T ss_pred             CCCeEEEEEe
Confidence            5566655544


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.4e-76  Score=584.90  Aligned_cols=476  Identities=25%  Similarity=0.437  Sum_probs=364.0

Q ss_pred             CCCCCCCCCCCccccchhhcC---CChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccce
Q 045756           32 TKRLPPGPPKLPIVGNLLQLS---QLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAA  108 (521)
Q Consensus        32 ~~~~pp~p~~~p~~G~~~~~~---~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~  108 (521)
                      ..+.||||+++|++|++..+.   .+++..+.+++++||++|++++++.+.++++||+++++++.++...|+.++.....
T Consensus        33 ~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~  112 (519)
T PLN00168         33 GRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASS  112 (519)
T ss_pred             CCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccch
Confidence            446788999999999987653   35778899999999999999999999999999999999998887778776643221


Q ss_pred             eeeccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHH
Q 045756          109 VHLAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTR  188 (521)
Q Consensus       109 ~~~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~  188 (521)
                      .....+.+...+..+|+.|+++|+.+..+.|+.++++.+.+.+.++++++++.+.+....++.+|+.+.++.++.++++.
T Consensus       113 ~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~  192 (519)
T PLN00168        113 RLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLVL  192 (519)
T ss_pred             hhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHH
Confidence            11222111222236799999999865579999999999999999999999999876544445789999999999999999


Q ss_pred             HhhcceecCCCCCChhHHHHHHHHHHHHHHHh-hhcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 045756          189 MLLGKQYFGGGSAGPEEAMEFMHITHELFRLL-GVIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRKARK  267 (521)
Q Consensus       189 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  267 (521)
                      ++||.++..      .....+......+.... ....+..++|.+.+.......++..++.+.+.+++..+++++++...
T Consensus       193 ~~fG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  266 (519)
T PLN00168        193 MCFGERLDE------PAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKN  266 (519)
T ss_pred             HHcCCCcCh------hhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999998742      12222323322222111 11222334554332221122345567788899999999998776432


Q ss_pred             hhccCCCcc---CCccchHHHHHhcCCCC-CCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHH
Q 045756          268 DKRNSVNEE---DGEAMDFVDVLLSLPGE-NGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEE  343 (521)
Q Consensus       268 ~~~~~~~~~---~~~~~d~l~~ll~~~~~-~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~E  343 (521)
                      .........   .....|+++.|++.... +++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       267 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~E  346 (519)
T PLN00168        267 HLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDE  346 (519)
T ss_pred             hccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            110000000   01245899999976432 22345999999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCC-CCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCCC
Q 045756          344 LDSVVGPN-RMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDIE  422 (521)
Q Consensus       344 i~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  422 (521)
                      |+++++++ +.++++++.+||||+|||+||||+||+++...+|.+.+|++++||.|||||.|+++++++||||++||||+
T Consensus       347 i~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~  426 (519)
T PLN00168        347 IKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPM  426 (519)
T ss_pred             HHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCcc
Confidence            99998753 56899999999999999999999999998867899999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCCc-cccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccc
Q 045756          423 QFRPERHWLADGSR-VEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTM  501 (521)
Q Consensus       423 ~F~p~Rf~~~~~~~-~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  501 (521)
                      +|+||||+.+.... .......+..|+|||.|+|+|+|++||+.|++++++.|+++|+|++.++.   ..+.....+++.
T Consensus       427 ~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~  503 (519)
T PLN00168        427 EFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGD---EVDFAEKREFTT  503 (519)
T ss_pred             ccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCC---cCChhhhceeEE
Confidence            99999998642211 11112234589999999999999999999999999999999999987653   122222234456


Q ss_pred             cccCCceeeecccCC
Q 045756          502 PKAQPLLALPRPRLA  516 (521)
Q Consensus       502 ~~~~~~~~~~~~r~~  516 (521)
                      .+++++.+++++|+.
T Consensus       504 ~~~~~~~~~~~~R~~  518 (519)
T PLN00168        504 VMAKPLRARLVPRRT  518 (519)
T ss_pred             eecCCcEEEEEeccC
Confidence            677789999999874


No 11 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=9e-77  Score=584.77  Aligned_cols=456  Identities=27%  Similarity=0.413  Sum_probs=355.0

Q ss_pred             CCCCCCCCCCCCccccchhhcCCChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccceee
Q 045756           31 QTKRLPPGPPKLPIVGNLLQLSQLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAAVH  110 (521)
Q Consensus        31 ~~~~~pp~p~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~  110 (521)
                      ...+.+|||+++|++|++..+..+++..+.+++++||++|++++++.++++++||+++++++.++.+.|.+++.......
T Consensus        26 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~  105 (482)
T PTZ00404         26 IHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKH  105 (482)
T ss_pred             ccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeee
Confidence            34566899999999999988877899999999999999999999999999999999999999877666766554332222


Q ss_pred             eccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHHHh
Q 045756          111 LAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTRML  190 (521)
Q Consensus       111 ~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~  190 (521)
                      ...  +..++..+|+.|+++|+.+ .+.|+.+.++.+.+.+.+.++.+++.+.+..+.++.+|+.+++..+++|+++.++
T Consensus       106 ~~~--~~~l~~~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  182 (482)
T PTZ00404        106 GTF--YHGIVTSSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYI  182 (482)
T ss_pred             ecc--CCceeccChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHH
Confidence            222  2446677899999999998 5899999999999999999999999987654446679999999999999999999


Q ss_pred             hcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 045756          191 LGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRKARKDKR  270 (521)
Q Consensus       191 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  270 (521)
                      ||.++........+....+......++...........++++.... ....+...+..+.+.+++.+.++++++..    
T Consensus       183 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----  257 (482)
T PTZ00404        183 FNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIKEKYHEHLKTI----  257 (482)
T ss_pred             hccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHcc----
Confidence            9998754221111223445555555544332221212222211110 00112233455566666666555544321    


Q ss_pred             cCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhCC
Q 045756          271 NSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDSVVGP  350 (521)
Q Consensus       271 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~  350 (521)
                           ......|+++.|+++..+.  ...+.+++.+++..+++||+|||+++++|++++|++||++|+||++|+++++++
T Consensus       258 -----~~~~~~dll~~ll~~~~~~--~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~  330 (482)
T PTZ00404        258 -----DPEVPRDLLDLLIKEYGTN--TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNG  330 (482)
T ss_pred             -----CCCCcccHHHHHHHHhccC--CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcC
Confidence                 1112468999999864321  122334588999999999999999999999999999999999999999999987


Q ss_pred             CCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccc-cceeeCCCCEEEeeeccccCCCCCCCCCCCCCCCcc
Q 045756          351 NRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTI-NGYHIPAKTRVFINTHGLGRNTRIWNDIEQFRPERH  429 (521)
Q Consensus       351 ~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~Rf  429 (521)
                      +..++++++++||||+|||+||||+||+++..++|.+.+|+++ +||.||||+.|+++.+++||||++||||++|+||||
T Consensus       331 ~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRw  410 (482)
T PTZ00404        331 RNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRF  410 (482)
T ss_pred             CCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCcccc
Confidence            6678999999999999999999999999997679999999999 999999999999999999999999999999999999


Q ss_pred             ccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccCCcee
Q 045756          430 WLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPKAQPLLA  509 (521)
Q Consensus       430 ~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (521)
                      ++..         .+..|+|||.|+|.|+|++||++|++++++.|+++|++++.++.   +.+.....++++. +.++.+
T Consensus       411 l~~~---------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~-~~~~~v  477 (482)
T PTZ00404        411 LNPD---------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGK---KIDETEEYGLTLK-PNKFKV  477 (482)
T ss_pred             CCCC---------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCC---CCCcccccceeec-CCCcee
Confidence            8421         34589999999999999999999999999999999999986553   2222333456666 467999


Q ss_pred             eeccc
Q 045756          510 LPRPR  514 (521)
Q Consensus       510 ~~~~r  514 (521)
                      .+++|
T Consensus       478 ~~~~R  482 (482)
T PTZ00404        478 LLEKR  482 (482)
T ss_pred             eeecC
Confidence            98877


No 12 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.7e-75  Score=578.77  Aligned_cols=470  Identities=31%  Similarity=0.558  Sum_probs=353.8

Q ss_pred             CCCCCCCCCCCCccccchhhcCCC-hhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCccccee
Q 045756           31 QTKRLPPGPPKLPIVGNLLQLSQL-PHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAAV  109 (521)
Q Consensus        31 ~~~~~pp~p~~~p~~G~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~  109 (521)
                      .+.+.||||+++|++|++..+..+ .+..+.+++++||++|++++++++.|+++||+.+++++.++...|.+++......
T Consensus        27 ~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~  106 (503)
T PLN02394         27 KKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD  106 (503)
T ss_pred             CcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHh
Confidence            345679999999999999887554 4688999999999999999999999999999999999987766676554322222


Q ss_pred             eeccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhcc-CCCceehHHHHHHHHHHHHHH
Q 045756          110 HLAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQ-SGKPVNLRDVLGAFSMNNVTR  188 (521)
Q Consensus       110 ~~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~vdl~~~~~~~~~~~i~~  188 (521)
                      .....+++.++..+|+.|+++|+.+..+.|+.+.++.+.+.+.++++++++.+.+... .++.+|+.+.++.+++|+++.
T Consensus       107 ~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~  186 (503)
T PLN02394        107 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYR  186 (503)
T ss_pred             HhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHH
Confidence            1111123567778899999999998668999999999999999999999999876432 234699999999999999999


Q ss_pred             HhhcceecCCCCCChhHHHHHHHHHHHHHHHhhh--cccccccccccccCCcchHHHHHHHHHHHHH-HHHHHHHHHHHh
Q 045756          189 MLLGKQYFGGGSAGPEEAMEFMHITHELFRLLGV--IYLGDYLPIWRWVDPHGCEKKMREVEKRVDD-FHTKIIEEHRKA  265 (521)
Q Consensus       189 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~  265 (521)
                      ++||.++....   +.....+.............  ..+..++|++.+.. ....+..........+ +...+++++++.
T Consensus       187 ~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  262 (503)
T PLN02394        187 MMFDRRFESED---DPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDYFVDERKKL  262 (503)
T ss_pred             HHhCCCccccc---chhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999886421   11122222222222111111  11122334332211 1111122222222222 233355555443


Q ss_pred             hhhhccCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 045756          266 RKDKRNSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELD  345 (521)
Q Consensus       266 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~  345 (521)
                      .....    ...+...|+++.|+++..+   ..++++++..++..+++||+|||+++++|++|+|++||++|+|||+||+
T Consensus       263 ~~~~~----~~~~~~~d~l~~ll~~~~~---~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~  335 (503)
T PLN02394        263 MSAKG----MDKEGLKCAIDHILEAQKK---GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELD  335 (503)
T ss_pred             hhhcc----CCcchhhhHHHHHHhcccc---CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            21100    0112346899999987543   2489999999999999999999999999999999999999999999999


Q ss_pred             HhhCCCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCCCCCC
Q 045756          346 SVVGPNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDIEQFR  425 (521)
Q Consensus       346 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  425 (521)
                      ++++.++.++++++++||||+|||+||||++|++++..+|.+.+|++++||.|||||.|.++++++||||++||||++|+
T Consensus       336 ~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~  415 (503)
T PLN02394        336 TVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFR  415 (503)
T ss_pred             HHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccC
Confidence            99986667899999999999999999999999999866899999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccccc-cccccc
Q 045756          426 PERHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYG-MTMPKA  504 (521)
Q Consensus       426 p~Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~  504 (521)
                      ||||++++++...  ......|+|||.|+|+|+|++||++|+++++|.|+++|+|++.++..  ..+..+.++ +.+..+
T Consensus       416 PeRwl~~~~~~~~--~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~  491 (503)
T PLN02394        416 PERFLEEEAKVEA--NGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS--KIDVSEKGGQFSLHIA  491 (503)
T ss_pred             ccccCCCCCcccc--cCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC--cCccccccCceeeccC
Confidence            9999864332111  22456899999999999999999999999999999999999876641  233343443 455456


Q ss_pred             CCceeeecccC
Q 045756          505 QPLLALPRPRL  515 (521)
Q Consensus       505 ~~~~~~~~~r~  515 (521)
                      .++.+++.+|+
T Consensus       492 ~~~~~~~~~r~  502 (503)
T PLN02394        492 KHSTVVFKPRS  502 (503)
T ss_pred             CCceEEeecCC
Confidence            79999999997


No 13 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=5e-75  Score=576.79  Aligned_cols=452  Identities=19%  Similarity=0.340  Sum_probs=353.1

Q ss_pred             CCCCCCCCCCCccccchhhcCC-------------------ChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHH
Q 045756           32 TKRLPPGPPKLPIVGNLLQLSQ-------------------LPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREIL   92 (521)
Q Consensus        32 ~~~~pp~p~~~p~~G~~~~~~~-------------------~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il   92 (521)
                      ..+.||||+++|++||+..+..                   .....+.+++++||++|++++++.+.++++||+++++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            3445999999999999887632                   222356889999999999999999999999999999999


Q ss_pred             HhcCcccccCCcccce-eeeccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccC-CC
Q 045756           93 LRQDEVFASRPRTLAA-VHLAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQS-GK  170 (521)
Q Consensus        93 ~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~-~~  170 (521)
                      .++.. +..++..... .....|  ..++..+|+.|+++|+.+ .+.|+.++++.+.+.+.++++++++.+.+.... +.
T Consensus       120 ~~~~~-~~~r~~~~~~~~~~~~g--~~l~~~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  195 (516)
T PLN02290        120 TKYNT-VTGKSWLQQQGTKHFIG--RGLLMANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQT  195 (516)
T ss_pred             hcCCC-CCCCcchhhhHHHHHhc--CCccccCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            77633 3333321111 111123  345667799999999998 488999999999999999999999999765332 35


Q ss_pred             ceehHHHHHHHHHHHHHHHhhcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHHHH
Q 045756          171 PVNLRDVLGAFSMNNVTRMLLGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVEKR  250 (521)
Q Consensus       171 ~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  250 (521)
                      .+|+.++++.+++++++.++||.++...        .++......+............+|++.++ +.+..++.+...+.
T Consensus       196 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-p~~~~~~~~~~~~~  266 (516)
T PLN02290        196 EVEIGEYMTRLTADIISRTEFDSSYEKG--------KQIFHLLTVLQRLCAQATRHLCFPGSRFF-PSKYNREIKSLKGE  266 (516)
T ss_pred             eEEhHHHHHHHHHHHHHHHHcCCccccc--------hHHHHHHHHHHHHHHHhhhhhcCchhhhC-CChhHHHHHHHHHH
Confidence            7999999999999999999999987431        12222222222221111111123443333 22334556677788


Q ss_pred             HHHHHHHHHHHHHHhhhhhccCCCccCCccchHHHHHhcCCCCC--CCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHH
Q 045756          251 VDDFHTKIIEEHRKARKDKRNSVNEEDGEAMDFVDVLLSLPGEN--GKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMA  328 (521)
Q Consensus       251 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~  328 (521)
                      +.+++.+.++++++......     .+....|+++.+++...+.  ++..++++++.+++.++++||+|||+++++|+++
T Consensus       267 ~~~~~~~~i~~~~~~~~~~~-----~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~  341 (516)
T PLN02290        267 VERLLMEIIQSRRDCVEIGR-----SSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLM  341 (516)
T ss_pred             HHHHHHHHHHHHHHHhhccc-----CCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            89999999988876542210     1123468999999764432  1234889999999999999999999999999999


Q ss_pred             HHhhChHHHHHHHHHHHHhhCCCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeee
Q 045756          329 EVIKHPRILRKIQEELDSVVGPNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINT  408 (521)
Q Consensus       329 ~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~  408 (521)
                      +|++||++|+|+|+|++++++++ .++++++++||||+|||+||||++|+++. ++|.+.+|++++||.|||||.|+++.
T Consensus       342 ~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~  419 (516)
T PLN02290        342 LLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPV  419 (516)
T ss_pred             HHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecH
Confidence            99999999999999999999864 78999999999999999999999999997 89999999999999999999999999


Q ss_pred             ccccCCCCCC-CCCCCCCCCccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCC
Q 045756          409 HGLGRNTRIW-NDIEQFRPERHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLR  487 (521)
Q Consensus       409 ~~~~~d~~~~-~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~  487 (521)
                      +++||||++| +||++|+||||+...       ......|+|||.|+|.|+|++||+.|++++++.|+++|++++.++..
T Consensus       420 ~~~~rdp~~~~~dP~~F~PeRfl~~~-------~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~  492 (516)
T PLN02290        420 LAIHHSEELWGKDANEFNPDRFAGRP-------FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR  492 (516)
T ss_pred             HHhcCChhhhCCChhhcCccccCCCC-------CCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc
Confidence            9999999999 899999999998321       11334799999999999999999999999999999999999876531


Q ss_pred             CCcccccccccccccccCCceeeecccC
Q 045756          488 PEDIDTSEVYGMTMPKAQPLLALPRPRL  515 (521)
Q Consensus       488 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~  515 (521)
                           .....+.++.|.+++.+++++|+
T Consensus       493 -----~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        493 -----HAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             -----cCccceeeecCCCCCeEEEEeCC
Confidence                 11122467889999999999986


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.1e-74  Score=565.68  Aligned_cols=457  Identities=28%  Similarity=0.451  Sum_probs=359.9

Q ss_pred             CCCCCCCccccchhhcC-CChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccceeeeccC
Q 045756           36 PPGPPKLPIVGNLLQLS-QLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAAVHLAYG  114 (521)
Q Consensus        36 pp~p~~~p~~G~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~g  114 (521)
                      ||||+++|++|+++++. .+++..+++++++||++|++++++++.++|+||+++++++.++...|+.++....... ..|
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~-~~~   79 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTV-LTR   79 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHH-Hhc
Confidence            68999999999998884 4588999999999999999999999999999999999999988888877653322211 122


Q ss_pred             CCCeE-ecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhcc--CCCceehHHHHHHHHHHHHHHHhh
Q 045756          115 CGDVA-LAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQ--SGKPVNLRDVLGAFSMNNVTRMLL  191 (521)
Q Consensus       115 ~~~~~-~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~--~~~~vdl~~~~~~~~~~~i~~~~f  191 (521)
                      .+..+ +..+|+.|+++|+.+.+++++...++.+.+.+.+.++.+++.+.+...  .++.+|+.+.++.+++|+++.++|
T Consensus        80 ~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~f  159 (466)
T PLN02655         80 DKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQAL  159 (466)
T ss_pred             CCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHh
Confidence            22333 345699999999988778899888899999888888888888865422  356799999999999999999999


Q ss_pred             cceecCCCCCChh----HHHHHHHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 045756          192 GKQYFGGGSAGPE----EAMEFMHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRKARK  267 (521)
Q Consensus       192 G~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  267 (521)
                      |.++.........    ....+......+........+..++|.+.|++.....+...+....+.+++..+++++++...
T Consensus       160 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  239 (466)
T PLN02655        160 GEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIA  239 (466)
T ss_pred             ccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9987643211000    012233333333333322223345666555543222333334445556777778777765432


Q ss_pred             hhccCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 045756          268 DKRNSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDSV  347 (521)
Q Consensus       268 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~  347 (521)
                      .        .....|+++.+++..     ..++++++.+++.++++||+|||+++++|++++|++||++|+|+|+||+++
T Consensus       240 ~--------~~~~~d~l~~ll~~~-----~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~  306 (466)
T PLN02655        240 R--------GEERDCYLDFLLSEA-----THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREV  306 (466)
T ss_pred             C--------CCCcccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            1        112358999999764     248999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCCCCCCCC
Q 045756          348 VGPNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDIEQFRPE  427 (521)
Q Consensus       348 ~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~  427 (521)
                      ++.+. ++++++++||||+|||+||||++|+++.+.+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||
T Consensus       307 ~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~Pe  385 (466)
T PLN02655        307 CGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPE  385 (466)
T ss_pred             hCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCcc
Confidence            88644 89999999999999999999999999986689999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccCCc
Q 045756          428 RHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPKAQPL  507 (521)
Q Consensus       428 Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (521)
                      ||+++.++     ......|+|||.|+|.|||++||..|++++++.||.+|++++.++.. +.   ....++++.+++++
T Consensus       386 R~~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~---~~~~~~~~~~~~~~  456 (466)
T PLN02655        386 RFLGEKYE-----SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EK---EDTVQLTTQKLHPL  456 (466)
T ss_pred             ccCCCCcc-----cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cc---cchhheeEeecCCc
Confidence            99854321     12346899999999999999999999999999999999999876532 11   22346678888999


Q ss_pred             eeeecccCC
Q 045756          508 LALPRPRLA  516 (521)
Q Consensus       508 ~~~~~~r~~  516 (521)
                      .+++++|.+
T Consensus       457 ~~~~~~r~~  465 (466)
T PLN02655        457 HAHLKPRGS  465 (466)
T ss_pred             EEEEeecCC
Confidence            999998875


No 15 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.9e-73  Score=560.76  Aligned_cols=479  Identities=30%  Similarity=0.524  Sum_probs=354.2

Q ss_pred             CCCCCCCCCccccchhhcCC-Chh-HHHHHHHHHh-CCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccceee
Q 045756           34 RLPPGPPKLPIVGNLLQLSQ-LPH-RDLASLCDKY-GPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAAVH  110 (521)
Q Consensus        34 ~~pp~p~~~p~~G~~~~~~~-~~~-~~~~~~~~ky-G~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~  110 (521)
                      +.||||+++|++|+++.+.. .+. .++.+..++| |++|++++++.++|+|+||+.+++++.++...|++++.......
T Consensus        40 ~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~  119 (534)
T PLN03018         40 QLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMET  119 (534)
T ss_pred             CCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhh
Confidence            46899999999999988732 332 4566777776 79999999999999999999999999888777887764332222


Q ss_pred             eccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHHHh
Q 045756          111 LAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTRML  190 (521)
Q Consensus       111 ~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~  190 (521)
                      ...+..+..+..+|+.|+++|+.+.+.+++......+.+....+++++++.+.+..+.++++|+.+.++.+++++++.++
T Consensus       120 l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~  199 (534)
T PLN03018        120 IGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRML  199 (534)
T ss_pred             hccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHHH
Confidence            22222245666679999999999964444554444455555567888988887644445679999999999999999999


Q ss_pred             hcceecCCCCCC---hhHHHHHHHHHHHHHHHhhh---cccccccc-cccccCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 045756          191 LGKQYFGGGSAG---PEEAMEFMHITHELFRLLGV---IYLGDYLP-IWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHR  263 (521)
Q Consensus       191 fG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  263 (521)
                      ||.++.......   ......+.............   .....++| ++.++...+..++.+.....+.+++.+++++++
T Consensus       200 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  279 (534)
T PLN03018        200 FGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDERV  279 (534)
T ss_pred             hCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999885432100   00111121112222111111   11112223 222111122234555667778888899998877


Q ss_pred             HhhhhhccCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHH
Q 045756          264 KARKDKRNSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEE  343 (521)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~E  343 (521)
                      +..++.     .+.....|+++.++...+++++..++++++.+++.++++||+|||+++++|++++|+.||++|+|+++|
T Consensus       280 ~~~~~~-----~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~E  354 (534)
T PLN03018        280 ELWREK-----GGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKE  354 (534)
T ss_pred             HHhhhc-----cCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            643211     011124689999997654432224899999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCCCC
Q 045756          344 LDSVVGPNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDIEQ  423 (521)
Q Consensus       344 i~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  423 (521)
                      |+++++.++.++.+++.+||||+|||+||||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+||++
T Consensus       355 i~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~  434 (534)
T PLN03018        355 LDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLV  434 (534)
T ss_pred             HHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccc
Confidence            99999877778999999999999999999999999998557999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCCccc-cccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccccccccc
Q 045756          424 FRPERHWLADGSRVE-ISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMP  502 (521)
Q Consensus       424 F~p~Rf~~~~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  502 (521)
                      |+||||++++++... .....+..|+|||+|+|.|+|++||..|+++++++|+++|++++.++..  ..+.....+.+..
T Consensus       435 F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~  512 (534)
T PLN03018        435 YEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFG--PLSLEEDDASLLM  512 (534)
T ss_pred             cCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCC--CCCccccccceec
Confidence            999999864332110 0012456899999999999999999999999999999999999876521  2222223344444


Q ss_pred             ccCCceeeecccCCCCCC
Q 045756          503 KAQPLLALPRPRLADHMY  520 (521)
Q Consensus       503 ~~~~~~~~~~~r~~~~~~  520 (521)
                       +.++.+++++|..+++|
T Consensus       513 -p~~~~v~~~~R~~~~~~  529 (534)
T PLN03018        513 -AKPLLLSVEPRLAPNLY  529 (534)
T ss_pred             -CCCeEEEEEeccccccc
Confidence             46999999999766666


No 16 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=3.1e-75  Score=567.45  Aligned_cols=458  Identities=27%  Similarity=0.492  Sum_probs=359.9

Q ss_pred             CCCCCCCCCCCccccchhhcCC---ChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccce
Q 045756           32 TKRLPPGPPKLPIVGNLLQLSQ---LPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAA  108 (521)
Q Consensus        32 ~~~~pp~p~~~p~~G~~~~~~~---~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~  108 (521)
                      +.+.||||.++|++|++..+..   +...++.++..+||++|+.|++|.++++++||+.+++|+.++.+...+.+.....
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            4556899999999999998833   4677888999999999999999999999999999999996655555555444433


Q ss_pred             eeeccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHH
Q 045756          109 VHLAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTR  188 (521)
Q Consensus       109 ~~~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~  188 (521)
                      .....|. +++++ +|+.|+++|+++ .+.|+.+.++.+...+.+.+..++..+..... ++.+|+.+.++++++|+++.
T Consensus       113 ~~~~lG~-gll~~-~g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~tld~i~~  188 (497)
T KOG0157|consen  113 LKPWLGD-GLLFS-DGEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAAS-GEEVDLQDLLKRLTLDIICK  188 (497)
T ss_pred             HHHHhcC-ccccC-CchHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeEcHHHHHHHHHHHHHHH
Confidence            3333443 44444 499999999998 59999999999999999999887777665432 33399999999999999999


Q ss_pred             HhhcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccc-cccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 045756          189 MLLGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLP-IWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRKARK  267 (521)
Q Consensus       189 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  267 (521)
                      ++||......   ......++...+..+...+..   ....| ...++...+..++.+++.+.++++++++|++|+++..
T Consensus       189 ~~~G~~~~~~---~~~~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~  262 (497)
T KOG0157|consen  189 TAMGPESLDA---EGPELFEYVQAFDDLTELISK---RINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELE  262 (497)
T ss_pred             HhcCCccccc---cCCcccHHHHHHHHHHHHHHH---HHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999322111   111233444444444333321   12234 3333332335789999999999999999999998764


Q ss_pred             hhccCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 045756          268 DKRNSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDSV  347 (521)
Q Consensus       268 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~  347 (521)
                      +.....   .....|+++.+....+    ..+++++|.+++.+|++||+|||+++++|+++.|+.||++|+|+++|++++
T Consensus       263 ~~~~~~---~~~~~d~L~~~~~~~~----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i  335 (497)
T KOG0157|consen  263 KEGSGE---EKKRLDFLDTLLLEED----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEI  335 (497)
T ss_pred             hcCCcc---cchhhhHHHHHHHhcc----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            322111   2446788885333222    459999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCC-CcccCCCCccHHHHHHhhhcCCCCCcccccccccccccc-cceeeCCCCEEEeeeccccCCCCCCC-CCCCC
Q 045756          348 VGPNRMV-NEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTI-NGYHIPAKTRVFINTHGLGRNTRIWN-DIEQF  424 (521)
Q Consensus       348 ~~~~~~~-~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~F  424 (521)
                      ++++... +....++|+||++||+||||||||+|. +.|.+.+|+.+ +||.||||+.|+++++++|||+++|+ ||++|
T Consensus       336 ~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F  414 (497)
T KOG0157|consen  336 LGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEF  414 (497)
T ss_pred             hCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhc
Confidence            9744322 222233699999999999999999999 89999999999 58999999999999999999999995 99999


Q ss_pred             CCCccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccccccccccc
Q 045756          425 RPERHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPKA  504 (521)
Q Consensus       425 ~p~Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (521)
                      |||||..+....    +.++++|+|||+|||.|+|++||++|+|+++++|+++|+|++..+..     .......++++.
T Consensus       415 ~PeRf~~~~~~~----~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~  485 (497)
T KOG0157|consen  415 DPERFLDGEEKA----KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELTLRPK  485 (497)
T ss_pred             CccccCCCCCcC----CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEEEEec
Confidence            999998533221    34578999999999999999999999999999999999999887631     333456789999


Q ss_pred             CCceeeecccCC
Q 045756          505 QPLLALPRPRLA  516 (521)
Q Consensus       505 ~~~~~~~~~r~~  516 (521)
                      .+++|++++|..
T Consensus       486 ~gl~v~~~~r~~  497 (497)
T KOG0157|consen  486 NGLKVKLRPRGS  497 (497)
T ss_pred             CCeEEEEEeCCC
Confidence            999999999963


No 17 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.1e-74  Score=525.90  Aligned_cols=458  Identities=24%  Similarity=0.370  Sum_probs=385.7

Q ss_pred             CCCCCCCCCccccchhhc----CCChhHHHHHHHHHhCCeEEEE-cCCccEEEEcCHHHHHHHHHhcCcccccCC-cccc
Q 045756           34 RLPPGPPKLPIVGNLLQL----SQLPHRDLASLCDKYGPLVYLR-LGSVDAITTNDPDIIREILLRQDEVFASRP-RTLA  107 (521)
Q Consensus        34 ~~pp~p~~~p~~G~~~~~----~~~~~~~~~~~~~kyG~v~~~~-~~~~~~v~i~~p~~i~~il~~~~~~~~~~~-~~~~  107 (521)
                      ..+|+|+++|++|....+    ..+.++.....++|||+||+.. +|+...|.+.+|++++.++..+ ..++.++ ....
T Consensus        50 ~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~E-G~~P~Rp~~~~~  128 (519)
T KOG0159|consen   50 EEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNE-GKYPFRPLLIEP  128 (519)
T ss_pred             hhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcC-CCCCCcccccch
Confidence            357889999999987733    3466788889999999999999 7888999999999999999555 4445554 1111


Q ss_pred             e--eeeccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhcc---CCCceehHHHHHHHH
Q 045756          108 A--VHLAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQ---SGKPVNLRDVLGAFS  182 (521)
Q Consensus       108 ~--~~~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~---~~~~vdl~~~~~~~~  182 (521)
                      .  -.-.++...+++..+|++|++.|..+++.+++++.++.+.+.+++.+++++..+....+   .....|+.+.+.+++
T Consensus       129 w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~ws  208 (519)
T KOG0159|consen  129 WVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWS  208 (519)
T ss_pred             hhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHH
Confidence            1  11234555668888999999999999999999999999999999999999999988754   334669999999999


Q ss_pred             HHHHHHHhhcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 045756          183 MNNVTRMLLGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEH  262 (521)
Q Consensus       183 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  262 (521)
                      +++||.++||.++++.....+++.+.|..++..++.....+.+   .|.++.+.+++.++++.++.+.+.++..+.|+++
T Consensus       209 lEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~---~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~  285 (519)
T KOG0159|consen  209 LESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLML---MPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNA  285 (519)
T ss_pred             HHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHh---cchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998887777889999999999887664432   3444445566678999999999999999999999


Q ss_pred             HHhhhhhccCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHH
Q 045756          263 RKARKDKRNSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQE  342 (521)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~  342 (521)
                      .++.+.+....   ......+...|.+       ..++.+++..+++++++||.|||+++++|+||+|++||++|++|++
T Consensus       286 l~~l~~~~~~~---~~~~~~l~~~L~~-------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~  355 (519)
T KOG0159|consen  286 LEELEKQDSAG---SEYTGSLLELLLR-------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLRE  355 (519)
T ss_pred             HHHHHhccccc---cchhHHHHHHHHH-------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHH
Confidence            98875532111   1112234444443       3489999999999999999999999999999999999999999999


Q ss_pred             HHHHhhCC-CCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCC
Q 045756          343 ELDSVVGP-NRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDI  421 (521)
Q Consensus       343 Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p  421 (521)
                      |+..+... +..++.+++.+||||.||||||+||||++++ ..|...+|..++||.|||||.|.++.+.+.+||++|++|
T Consensus       356 Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~-~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p  434 (519)
T KOG0159|consen  356 EILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPG-NGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDP  434 (519)
T ss_pred             HHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccc-cccccchhceeccceecCCCeEEEeehhhccChhhCCCc
Confidence            99999986 6789999999999999999999999999999 899999999999999999999999999999999999999


Q ss_pred             CCCCCCccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccc
Q 045756          422 EQFRPERHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTM  501 (521)
Q Consensus       422 ~~F~p~Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  501 (521)
                      ++|+||||++++.+     +.++..++|||.|+|+|+||+||++|+.+.|++|+++|+++...+.     +....+.++.
T Consensus       435 ~~F~PeRWL~~~~~-----~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~-----pv~~~~~~il  504 (519)
T KOG0159|consen  435 EEFLPERWLKPSTK-----TIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE-----PVEYVYRFIL  504 (519)
T ss_pred             cccChhhhcccccC-----CCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC-----CccceeEEEE
Confidence            99999999975521     5688899999999999999999999999999999999999987642     3334455678


Q ss_pred             cccCCceeeecccCC
Q 045756          502 PKAQPLLALPRPRLA  516 (521)
Q Consensus       502 ~~~~~~~~~~~~r~~  516 (521)
                      .|..++.+++++|..
T Consensus       505 ~P~~~l~f~f~~r~~  519 (519)
T KOG0159|consen  505 VPNRPLRFKFRPRNE  519 (519)
T ss_pred             cCCCCcceeeeeCCC
Confidence            899999999999863


No 18 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=4e-73  Score=559.01  Aligned_cols=443  Identities=19%  Similarity=0.269  Sum_probs=338.1

Q ss_pred             ccCCCCCCCCCCCCccccchhhcC-----CChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCC
Q 045756           29 FHQTKRLPPGPPKLPIVGNLLQLS-----QLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRP  103 (521)
Q Consensus        29 ~~~~~~~pp~p~~~p~~G~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~  103 (521)
                      .++..+.||||+++|++|++..+.     +.++.++.+++++||++|+++++++++|+++||+++++++.++...|..+.
T Consensus        33 ~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~  112 (490)
T PLN02500         33 KQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSY  112 (490)
T ss_pred             ccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeC
Confidence            345567799999999999976542     346678899999999999999999999999999999999987766664332


Q ss_pred             cccceeeeccCCCCeEecCCChhHHHHHHHHhhhccchhhhhh-hHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHH
Q 045756          104 RTLAAVHLAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLES-FVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFS  182 (521)
Q Consensus       104 ~~~~~~~~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~  182 (521)
                      .....  ...| +..++..+|+.|+++|+.+. +.|+...++. +.+.+.+.+..+++.+..    ++.+|+.+.++.++
T Consensus       113 ~~~~~--~~~g-~~~~~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~vd~~~~~~~~~  184 (490)
T PLN02500        113 PRSIG--GILG-KWSMLVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWKE----NSTFSAQDEAKKFT  184 (490)
T ss_pred             chHHH--HHhC-cccccccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhCC----CCCEEehHHHHHHH
Confidence            11111  1123 22355557999999999985 8899988886 456777777776665532    45799999999999


Q ss_pred             HHHHHHHhhcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 045756          183 MNNVTRMLLGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEH  262 (521)
Q Consensus       183 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  262 (521)
                      ++++++++||.+...      .....+.............  ....+|.       ...++..++.+.+.+++.+.++++
T Consensus       185 ~~vi~~~~fg~~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~~~~~~~~~i~~~  249 (490)
T PLN02500        185 FNLMAKHIMSMDPGE------EETEQLKKEYVTFMKGVVS--APLNFPG-------TAYRKALKSRATILKFIERKMEER  249 (490)
T ss_pred             HHHHHHHHhCCCCCc------hHHHHHHHHHHHHHhhhhc--chhcCCC-------cccHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999987532      1222333323222221110  0011121       113456667888999999999887


Q ss_pred             HHhhhhhccCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHH
Q 045756          263 RKARKDKRNSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQE  342 (521)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~  342 (521)
                      +++.+.+     +......|+++.+++.      ..++++++.+++.++++||+|||+++++|++++|++||++|+|+|+
T Consensus       250 ~~~~~~~-----~~~~~~~d~l~~ll~~------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~  318 (490)
T PLN02500        250 IEKLKEE-----DESVEEDDLLGWVLKH------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELRE  318 (490)
T ss_pred             HHhhhcc-----cCCCCcchHHHHHHhc------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence            7653221     1111246899999973      2489999999999999999999999999999999999999999999


Q ss_pred             HHHHhhC-----CCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCC
Q 045756          343 ELDSVVG-----PNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRI  417 (521)
Q Consensus       343 Ei~~~~~-----~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~  417 (521)
                      |++++++     +++.++++++++||||+|||+||||+||+++. ++|.+.+|++++||.|||||.|+++.+++||||++
T Consensus       319 Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~  397 (490)
T PLN02500        319 EHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSL  397 (490)
T ss_pred             HHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcccCccc
Confidence            9999864     23458999999999999999999999999998 68999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccccCCCCccc--cccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccc
Q 045756          418 WNDIEQFRPERHWLADGSRVE--ISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSE  495 (521)
Q Consensus       418 ~~~p~~F~p~Rf~~~~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~  495 (521)
                      |+||++|+||||++++++...  .....+..|+|||+|+|.|+|++||+.|+++++++|+++|+|++.++..    ... 
T Consensus       398 ~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~----~~~-  472 (490)
T PLN02500        398 YDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQ----AFA-  472 (490)
T ss_pred             CCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCc----cee-
Confidence            999999999999864322110  0012456899999999999999999999999999999999999876531    111 


Q ss_pred             cccccccccCCceeeecc
Q 045756          496 VYGMTMPKAQPLLALPRP  513 (521)
Q Consensus       496 ~~~~~~~~~~~~~~~~~~  513 (521)
                       +..+ .+++++.+++++
T Consensus       473 -~~~~-~~~~~l~~~~~~  488 (490)
T PLN02500        473 -FPFV-DFPKGLPIRVRR  488 (490)
T ss_pred             -cccc-cCCCCceEEEEe
Confidence             1122 334688888765


No 19 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=9.1e-74  Score=566.96  Aligned_cols=456  Identities=32%  Similarity=0.551  Sum_probs=364.4

Q ss_pred             CCCCCCCccccchhhcC--CChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccceee-ec
Q 045756           36 PPGPPKLPIVGNLLQLS--QLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAAVH-LA  112 (521)
Q Consensus        36 pp~p~~~p~~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~-~~  112 (521)
                      ||||+++|++|++..+.  ++++.++.+++++||++|+++++++++++|+||+++++|+.++.+.++.++....... ..
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            78999999999999986  6788999999999999999999999999999999999999888766665432222211 11


Q ss_pred             cCCCCeEecCCChhHHHHHHHHhhhccchh-hhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHHHhh
Q 045756          113 YGCGDVALAPLGPHWKRMRRICMENLLTTK-RLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTRMLL  191 (521)
Q Consensus       113 ~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~f  191 (521)
                      ...+..++..+|+.|+.+|+.+. +.|+.. .+ .+.+.+.+.++++++.+.+....++.+|+.++++.+++|+++.++|
T Consensus        81 ~~~~~~l~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~f  158 (463)
T PF00067_consen   81 PFGGKGLFFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLF  158 (463)
T ss_dssp             HHTTTSSTTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeecccccccccccccccc
Confidence            11234466666899999999985 666666 66 8999999999999999988765555799999999999999999999


Q ss_pred             cceecCCCCCChhHHHHHHHHHHHHHHHhhh--cccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 045756          192 GKQYFGGGSAGPEEAMEFMHITHELFRLLGV--IYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRKARKDK  269 (521)
Q Consensus       192 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  269 (521)
                      |.+++..   .......+.+....+......  ..+...+|++.++ +....++..++.+.+.+++.+.+++++++... 
T Consensus       159 G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-  233 (463)
T PF00067_consen  159 GKDFGSL---DDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERREELDD-  233 (463)
T ss_dssp             SSHHHGT---THHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHS-
T ss_pred             cceeeec---cccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc-
Confidence            9998643   222334566666666544321  1233345544433 33446777778889999999999998877633 


Q ss_pred             ccCCCccCCccchHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 045756          270 RNSVNEEDGEAMDFVDVLLSLP-GENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDSVV  348 (521)
Q Consensus       270 ~~~~~~~~~~~~d~l~~ll~~~-~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~  348 (521)
                            ......|+++.++... +.+++..++++++.++++.+++||++||+++++|++++|++||++|++||+||+++.
T Consensus       234 ------~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~  307 (463)
T PF00067_consen  234 ------GDESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVL  307 (463)
T ss_dssp             ------SSSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHT
T ss_pred             ------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                  1235679999999986 333334799999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCCCCCCCCc
Q 045756          349 GPNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDIEQFRPER  428 (521)
Q Consensus       349 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R  428 (521)
                      ++++.++.+++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+|||
T Consensus       308 ~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R  387 (463)
T PF00067_consen  308 GDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPER  387 (463)
T ss_dssp             TTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTG
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            77678999999999999999999999999999558999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccCCce
Q 045756          429 HWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPKAQPLL  508 (521)
Q Consensus       429 f~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (521)
                      |+..++..    ...+..|+|||.|+|.|+|++||+.|++++|++||++|||+++++......  ....++ ..++.++.
T Consensus       388 ~~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~--~~~~~~-~~~~~~~~  460 (463)
T PF00067_consen  388 FLDERGIS----NRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQ--EQQNGF-LLPPKPLK  460 (463)
T ss_dssp             GBTTTSTB----CSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEE--ECSCSS-SEEESSSE
T ss_pred             cccccccc----ccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCc--cccCce-EeeCCCcE
Confidence            99655411    346678999999999999999999999999999999999999765422211  111133 44445676


Q ss_pred             eee
Q 045756          509 ALP  511 (521)
Q Consensus       509 ~~~  511 (521)
                      |++
T Consensus       461 ~~~  463 (463)
T PF00067_consen  461 VKF  463 (463)
T ss_dssp             EEE
T ss_pred             EeC
Confidence            653


No 20 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=6.3e-72  Score=554.08  Aligned_cols=457  Identities=20%  Similarity=0.292  Sum_probs=341.0

Q ss_pred             CCCCCCCccccchhhcCCChhHHHHHHHHHh---CCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccceeeec
Q 045756           36 PPGPPKLPIVGNLLQLSQLPHRDLASLCDKY---GPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAAVHLA  112 (521)
Q Consensus        36 pp~p~~~p~~G~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~~~  112 (521)
                      +|||+++|++|+++.+..+ +..+.++.++|   |++|++++++.+.++++||+.+++|+.++...+.+.+.........
T Consensus        32 ~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~~  110 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVL  110 (516)
T ss_pred             cCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHHH
Confidence            7899999999998765433 34566777777   8999999999999999999999999977645555443221111111


Q ss_pred             cCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHH-HHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHHHhh
Q 045756          113 YGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHR-ADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTRMLL  191 (521)
Q Consensus       113 ~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~f  191 (521)
                      .|  +.+++.+|+.|+++|+.+ ++.|+.++++.+.+.+ .+.++.+++.+.+...+++.+|+.++++.+++|+++.++|
T Consensus       111 ~g--~~l~~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~f  187 (516)
T PLN03195        111 LG--DGIFNVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGF  187 (516)
T ss_pred             hc--CeeeccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHh
Confidence            22  346677899999999998 5889999999998876 5556666666654333456799999999999999999999


Q ss_pred             cceecCCCCCChhHHHHHHHHHHHHHHHhhhccccccccc--ccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 045756          192 GKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPI--WRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRKARKDK  269 (521)
Q Consensus       192 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  269 (521)
                      |.++........  ...+...............   ..|.  +.++......++..++.+.+.+++.+.++++++.....
T Consensus       188 G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (516)
T PLN03195        188 GVEIGTLSPSLP--ENPFAQAFDTANIIVTLRF---IDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEA  262 (516)
T ss_pred             CCCccccccCCC--ccHHHHHHHHHHHHHHHHH---hcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            998865431111  1223333332222111000   1121  11111112234556677888888888888877553211


Q ss_pred             ccCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhC
Q 045756          270 RNSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDSVVG  349 (521)
Q Consensus       270 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~  349 (521)
                      ..   +......|+++.+++..++. +..++++++.++++++++||+|||+++++|++|+|++||++|+|||+|++++++
T Consensus       263 ~~---~~~~~~~d~l~~ll~~~~~~-~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~  338 (516)
T PLN03195        263 RK---SGKKVKHDILSRFIELGEDP-DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEK  338 (516)
T ss_pred             cc---ccccccccHHHHHHhccCCC-CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhh
Confidence            00   01123468999999764432 245999999999999999999999999999999999999999999999999864


Q ss_pred             C--------------------CCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccc-cceeeCCCCEEEeee
Q 045756          350 P--------------------NRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTI-NGYHIPAKTRVFINT  408 (521)
Q Consensus       350 ~--------------------~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i-~g~~ip~G~~v~~~~  408 (521)
                      +                    ++.++++++.+||||+|||+||||++|+++. ..|.+.+|..+ +|+.||||+.|+++.
T Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~-~~r~~~~d~~~~~G~~IpkGt~V~~~~  417 (516)
T PLN03195        339 ERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQ-DPKGILEDDVLPDGTKVKAGGMVTYVP  417 (516)
T ss_pred             cccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcc-hhhhhccCcCcCCCcEECCCCEEEEeh
Confidence            2                    2457899999999999999999999999999 57777777666 999999999999999


Q ss_pred             ccccCCCCCC-CCCCCCCCCccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCC
Q 045756          409 HGLGRNTRIW-NDIEQFRPERHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLR  487 (521)
Q Consensus       409 ~~~~~d~~~~-~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~  487 (521)
                      +++||||++| |||++|+||||+++....    ...++.|+|||.|+|.|+|++||++|++++++.|+++|++++.++. 
T Consensus       418 ~~~h~dp~~~g~dP~~F~PeRwl~~~~~~----~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~-  492 (516)
T PLN03195        418 YSMGRMEYNWGPDAASFKPERWIKDGVFQ----NASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH-  492 (516)
T ss_pred             HhhccChhhhccChhhcCCcccCCCCCcC----CCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC-
Confidence            9999999999 999999999998532111    2245679999999999999999999999999999999999986542 


Q ss_pred             CCcccccccccccccccCCceeeecccC
Q 045756          488 PEDIDTSEVYGMTMPKAQPLLALPRPRL  515 (521)
Q Consensus       488 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~  515 (521)
                        +..  .....++.|..++.+++++|.
T Consensus       493 --~~~--~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        493 --PVK--YRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             --cce--eeeeeEEecCCCEEEEEEeCC
Confidence              122  222345778889999999874


No 21 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=6.5e-72  Score=548.15  Aligned_cols=452  Identities=21%  Similarity=0.322  Sum_probs=339.0

Q ss_pred             CCCCCCCCccccchhhcCCChh---HHHHHHHHHhCCeEE---EEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccce
Q 045756           35 LPPGPPKLPIVGNLLQLSQLPH---RDLASLCDKYGPLVY---LRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAA  108 (521)
Q Consensus        35 ~pp~p~~~p~~G~~~~~~~~~~---~~~~~~~~kyG~v~~---~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~  108 (521)
                      ..|+|+++|++|++..+.++..   +.+.+...+||..++   +++++.++++|+||+.+++|+.++...|.+.+.....
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~  111 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI  111 (500)
T ss_pred             CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence            3789999999999877733332   333444445886555   6788999999999999999998877777665432211


Q ss_pred             eeeccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhh--HHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHH
Q 045756          109 VHLAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESF--VTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNV  186 (521)
Q Consensus       109 ~~~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i  186 (521)
                      . ...|  ..++..+|+.|+++|+++. +.|+...+..+  .+.+.+.++.+++.+.+...+++.+|+.+.+..+++|++
T Consensus       112 ~-~~~g--~gl~~~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi  187 (500)
T PLN02169        112 F-DVLG--EGILTVDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTS  187 (500)
T ss_pred             H-Hhhc--CcccccCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHH
Confidence            1 1122  4466677999999999984 99998877643  355667777788877654445678999999999999999


Q ss_pred             HHHhhcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccc----cCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 045756          187 TRMLLGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRW----VDPHGCEKKMREVEKRVDDFHTKIIEEH  262 (521)
Q Consensus       187 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~  262 (521)
                      +.++||.+..+....  .....+............   ...+.|++.+    +.+.+..++.+++.+.+++++.++++++
T Consensus       188 ~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r  262 (500)
T PLN02169        188 SILMTGYDPMSLSIE--MLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSR  262 (500)
T ss_pred             HhheeCCCccccCCC--CCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence            999999987543211  011233333332222111   1112232111    1223345778889999999999999988


Q ss_pred             HHhhhhhccCCCccCCccchHHHHHhcCCCCCC--CCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHH
Q 045756          263 RKARKDKRNSVNEEDGEAMDFVDVLLSLPGENG--KEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKI  340 (521)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l  340 (521)
                      +++..+..    +.+....|+++.+++....+.  ...++++++.+++.++++||+|||+++++|++++|++||++|+|+
T Consensus       263 ~~~~~~~~----~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl  338 (500)
T PLN02169        263 RKEEISRA----ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKI  338 (500)
T ss_pred             HHHhhccc----cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHH
Confidence            76422110    011124689999987643211  124788999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCCCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccc-cceeeCCCCEEEeeeccccCCCCCC-
Q 045756          341 QEELDSVVGPNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTI-NGYHIPAKTRVFINTHGLGRNTRIW-  418 (521)
Q Consensus       341 r~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~-  418 (521)
                      ++||++++      +++++.+||||+|||+|||||||++|. ..|.+.+|.++ +|+.||||+.|++++|++||||++| 
T Consensus       339 ~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~-~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~  411 (500)
T PLN02169        339 RHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPF-NHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWG  411 (500)
T ss_pred             HHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCc-CceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccC
Confidence            99999874      578999999999999999999999998 67777666665 9999999999999999999999999 


Q ss_pred             CCCCCCCCCccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccccc
Q 045756          419 NDIEQFRPERHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYG  498 (521)
Q Consensus       419 ~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  498 (521)
                      |||++|+||||++++++..   +..+..|+|||+|+|.|+|++||+.|++++++.|+++|+|++.++.   ..  ....+
T Consensus       412 ~dP~~F~PeRfl~~~~~~~---~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~---~~--~~~~~  483 (500)
T PLN02169        412 EDALDFKPERWISDNGGLR---HEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH---KI--EAIPS  483 (500)
T ss_pred             CChhhcCccccCCCCCCcc---CCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC---Cc--ccccc
Confidence            8999999999985433211   1246789999999999999999999999999999999999987542   12  22345


Q ss_pred             ccccccCCceeeeccc
Q 045756          499 MTMPKAQPLLALPRPR  514 (521)
Q Consensus       499 ~~~~~~~~~~~~~~~r  514 (521)
                      ++++|++++.+++++|
T Consensus       484 ~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        484 ILLRMKHGLKVTVTKK  499 (500)
T ss_pred             eEEecCCCEEEEEEeC
Confidence            6788999999999987


No 22 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=5.5e-72  Score=546.37  Aligned_cols=430  Identities=19%  Similarity=0.284  Sum_probs=337.1

Q ss_pred             CCCCCCCCCCCccccchhhcCCChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccceeee
Q 045756           32 TKRLPPGPPKLPIVGNLLQLSQLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAAVHL  111 (521)
Q Consensus        32 ~~~~pp~p~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~~  111 (521)
                      ..+.||||+++|++|+++.+.+++..++++++++||++|+++++++++++++||+.+++++.++...+.........  .
T Consensus        29 r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~--~  106 (463)
T PLN02774         29 KKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSML--D  106 (463)
T ss_pred             CCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHH--H
Confidence            44568899999999999888777888999999999999999999999999999999999997766555332211111  1


Q ss_pred             ccCCCCeEecCCChhHHHHHHHHhhhccchhhhhh-hHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHHHh
Q 045756          112 AYGCGDVALAPLGPHWKRMRRICMENLLTTKRLES-FVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTRML  190 (521)
Q Consensus       112 ~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~  190 (521)
                      ..|. +.++..+|+.|+++|+.+ .+.|+...++. +.+.+.+.++++++.+..    ++++|+.+.+..+++++++.++
T Consensus       107 ~lg~-~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~  180 (463)
T PLN02774        107 ILGT-CNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWDG----LKTIDIQEKTKEMALLSALKQI  180 (463)
T ss_pred             HhCc-cchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhCC----CCCEEeeHHHHHHHHHHHHHHH
Confidence            2332 345566799999999998 47899998876 678888888887776532    4579999999999999999999


Q ss_pred             hcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 045756          191 LGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRKARKDKR  270 (521)
Q Consensus       191 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  270 (521)
                      ||.+...       ....+......+..  ...    .+|.  ++ +....++..++.+.+.+++.+.++++++..    
T Consensus       181 ~g~~~~~-------~~~~~~~~~~~~~~--~~~----~~~~--~l-p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----  240 (463)
T PLN02774        181 AGTLSKP-------ISEEFKTEFFKLVL--GTL----SLPI--DL-PGTNYRSGVQARKNIVRMLRQLIQERRASG----  240 (463)
T ss_pred             cCCCChH-------HHHHHHHHHHHHhc--ccc----cCCc--CC-CChhhhHHHHHHHHHHHHHHHHHHHHHhcC----
Confidence            9976421       12222222222111  111    1121  11 111235666778888888888888765321    


Q ss_pred             cCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhCC
Q 045756          271 NSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDSVVGP  350 (521)
Q Consensus       271 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~  350 (521)
                             ....|+++.++....+  +..++++|+.+++.++++||+|||+++++|++++|++||++|+|+|+|++++++.
T Consensus       241 -------~~~~d~l~~ll~~~~~--~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~  311 (463)
T PLN02774        241 -------ETHTDMLGYLMRKEGN--RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRER  311 (463)
T ss_pred             -------CCcccHHHHHHhCccC--CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence                   1246899999874322  2358999999999999999999999999999999999999999999999999863


Q ss_pred             ---CCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCCCCCCCC
Q 045756          351 ---NRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDIEQFRPE  427 (521)
Q Consensus       351 ---~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~  427 (521)
                         ++.++++++++||||+|||+||||++|+++. +.|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||
T Consensus       312 ~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~Pe  390 (463)
T PLN02774        312 KRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPW  390 (463)
T ss_pred             cCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCch
Confidence               3568899999999999999999999999987 789999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccCCc
Q 045756          428 RHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPKAQPL  507 (521)
Q Consensus       428 Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (521)
                      ||++++.      . ....|+|||+|+|.|+|++||..|++++++.|+++|+|++.++..   . .  .. .+..|++++
T Consensus       391 Rfl~~~~------~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~---~-~--~~-~~~~p~~g~  456 (463)
T PLN02774        391 RWLDKSL------E-SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDK---L-M--KF-PRVEAPNGL  456 (463)
T ss_pred             hcCCCCc------C-CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCc---c-c--cC-CCCCCCCCc
Confidence            9985321      1 123699999999999999999999999999999999999876531   1 1  11 133467889


Q ss_pred             eeeecc
Q 045756          508 LALPRP  513 (521)
Q Consensus       508 ~~~~~~  513 (521)
                      .+++++
T Consensus       457 ~~~~~~  462 (463)
T PLN02774        457 HIRVSP  462 (463)
T ss_pred             eEEeee
Confidence            998874


No 23 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=4.5e-71  Score=539.32  Aligned_cols=426  Identities=20%  Similarity=0.303  Sum_probs=340.7

Q ss_pred             CCCCCCCCCCCccccchhhc-CCChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccceee
Q 045756           32 TKRLPPGPPKLPIVGNLLQL-SQLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAAVH  110 (521)
Q Consensus        32 ~~~~pp~p~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~  110 (521)
                      +.+.||||+++|++|++..+ ..+++.++.+++++||++++++++++++++++||+++++++.++.+.+.  +.......
T Consensus        33 ~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~~  110 (463)
T PLN02196         33 KLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASKE  110 (463)
T ss_pred             CCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHHH
Confidence            44568888899999998875 6789999999999999999999999999999999999999987766553  21111111


Q ss_pred             eccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHHHh
Q 045756          111 LAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTRML  190 (521)
Q Consensus       111 ~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~  190 (521)
                      ...|. ..++..+|+.|+++|+++. +.|+.++++.+.+.+.+.++++++.+.     ++.+|+.++++.+++++++.++
T Consensus       111 ~~~g~-~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~~~~  183 (463)
T PLN02196        111 RMLGK-QAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVALLSI  183 (463)
T ss_pred             HHcCc-ccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHHHHH
Confidence            22332 3456678999999999995 889999999999999999999888763     4579999999999999999999


Q ss_pred             hcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 045756          191 LGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRKARKDKR  270 (521)
Q Consensus       191 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  270 (521)
                      ||.+...       ....+......+...      ...+|+.   .+....++..++.+.+.+++.+.++++++..    
T Consensus       184 fG~~~~~-------~~~~~~~~~~~~~~~------~~~~~~~---~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~----  243 (463)
T PLN02196        184 FGKDEVL-------YREDLKRCYYILEKG------YNSMPIN---LPGTLFHKSMKARKELAQILAKILSKRRQNG----  243 (463)
T ss_pred             cCCCCch-------HHHHHHHHHHHHhcc------hhccccc---CCCccchHHHHHHHHHHHHHHHHHHHHhhcC----
Confidence            9987521       111222222111110      0112221   1111235667788888888888887765431    


Q ss_pred             cCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhCC
Q 045756          271 NSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDSVVGP  350 (521)
Q Consensus       271 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~  350 (521)
                             ....|+++.+++.     ...++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++++.+.
T Consensus       244 -------~~~~d~l~~ll~~-----~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~  311 (463)
T PLN02196        244 -------SSHNDLLGSFMGD-----KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKD  311 (463)
T ss_pred             -------CCcccHHHHHHhc-----CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcc
Confidence                   1245899988853     1348999999999999999999999999999999999999999999999998763


Q ss_pred             ---CCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCCCCCCCC
Q 045756          351 ---NRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDIEQFRPE  427 (521)
Q Consensus       351 ---~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~  427 (521)
                         ++.++++++++||||+|||+||||++|++++ ..|.+.+|+.++||.||||+.|+++.+++||||++|+||++|+||
T Consensus       312 ~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~Pe  390 (463)
T PLN02196        312 KEEGESLTWEDTKKMPLTSRVIQETLRVASILSF-TFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPS  390 (463)
T ss_pred             cccCCCCCHHHHhcChHHHHHHHHHHhcCCCccc-cceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChh
Confidence               3568899999999999999999999999998 679999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccCCc
Q 045756          428 RHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPKAQPL  507 (521)
Q Consensus       428 Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (521)
                      ||+...         .+..|+|||.|+|.|+|+++|+.|++++++.|+++|+|++.++.    ..+.  +..+..|+.++
T Consensus       391 Rfl~~~---------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~----~~~~--~~~~~~p~~~~  455 (463)
T PLN02196        391 RFEVAP---------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS----NGIQ--YGPFALPQNGL  455 (463)
T ss_pred             hhcCCC---------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC----CceE--EcccccCCCCc
Confidence            998421         34589999999999999999999999999999999999987542    1222  33355688899


Q ss_pred             eeeeccc
Q 045756          508 LALPRPR  514 (521)
Q Consensus       508 ~~~~~~r  514 (521)
                      .++++.+
T Consensus       456 ~~~~~~~  462 (463)
T PLN02196        456 PIALSRK  462 (463)
T ss_pred             eEEEecC
Confidence            9988764


No 24 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=8.2e-71  Score=547.33  Aligned_cols=449  Identities=22%  Similarity=0.378  Sum_probs=343.0

Q ss_pred             cchhhc-CCChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccceeeeccCCCCeEecCCC
Q 045756           46 GNLLQL-SQLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAAVHLAYGCGDVALAPLG  124 (521)
Q Consensus        46 G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g  124 (521)
                      |++..+ .+..+..+.++++||||||++++++.++++|+||+.+++|+..+...|.+....... ....|  ..++..+|
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~-~~~~g--~~l~~~dg  219 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEIL-EFVMG--KGLIPADG  219 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHH-hhccC--CceecCCc
Confidence            444444 445678899999999999999999889999999999999998776666654321111 11122  34566789


Q ss_pred             hhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHHHhhcceecCCCCCChh
Q 045756          125 PHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTRMLLGKQYFGGGSAGPE  204 (521)
Q Consensus       125 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~  204 (521)
                      +.|+.+|+.+ .+.|+...++.+.+.+.+.++++++.+.+...+++.+|+.+.++.+++|+|+.++||.+++....  + 
T Consensus       220 e~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~--~-  295 (633)
T PLN02738        220 EIWRVRRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSN--D-  295 (633)
T ss_pred             HHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCcccccc--c-
Confidence            9999999998 58999999999999999999999999977655677899999999999999999999998864321  1 


Q ss_pred             HHHHHHHHHHHHHHHhhhcccccc----cccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccC--CCccCC
Q 045756          205 EAMEFMHITHELFRLLGVIYLGDY----LPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRKARKDKRNS--VNEEDG  278 (521)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~  278 (521)
                        ..+..................+    +|.+..+++  ..++..++.+.+.++...+++.+++...+....  ......
T Consensus       296 --~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~--~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~  371 (633)
T PLN02738        296 --TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISP--RQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNE  371 (633)
T ss_pred             --hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhch--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhccccc
Confidence              1222222222221111111111    122221211  134555566677777777776654432211100  000112


Q ss_pred             ccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCccc
Q 045756          279 EAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDSVVGPNRMVNEQD  358 (521)
Q Consensus       279 ~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~  358 (521)
                      .+.|+++.|++..     ..++++++.++++.+++||+|||+++++|++++|++||++|+|||+|++++++ ++.+++++
T Consensus       372 ~~~dil~~Ll~~~-----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~ed  445 (633)
T PLN02738        372 RDPSILHFLLASG-----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIED  445 (633)
T ss_pred             ccchHHHHHHHcC-----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHH
Confidence            3468999998753     24899999999999999999999999999999999999999999999999987 46689999


Q ss_pred             CCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCCCCCCCCccccCCCCccc
Q 045756          359 LPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDIEQFRPERHWLADGSRVE  438 (521)
Q Consensus       359 l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~Rf~~~~~~~~~  438 (521)
                      +++||||+|||+|+|||||+++. ..|.+.+|.+++||.|||||.|+++.+.+||||++||||++|+||||+....+...
T Consensus       446 L~kLPYL~AVIkEtLRL~p~~p~-~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~  524 (633)
T PLN02738        446 MKKLKYTTRVINESLRLYPQPPV-LIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNE  524 (633)
T ss_pred             HccCHHHHHHHHHHHhcCCCccc-cceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccc
Confidence            99999999999999999999998 67999999999999999999999999999999999999999999999843211100


Q ss_pred             cccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccCCceeeecccCCCC
Q 045756          439 ISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPKAQPLLALPRPRLADH  518 (521)
Q Consensus       439 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  518 (521)
                        ......|+|||.|+|+|+|++||++|++++|+.|+++|+|++.++..    +.....+.++.+.+++++++++|..+-
T Consensus       525 --~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~----~~~~~~~~~~~p~~~l~v~l~~R~~~~  598 (633)
T PLN02738        525 --TNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP----PVKMTTGATIHTTEGLKMTVTRRTKPP  598 (633)
T ss_pred             --cCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC----CcccccceEEeeCCCcEEEEEECCCCC
Confidence              22456899999999999999999999999999999999999876531    122223557788899999999998754


No 25 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.8e-70  Score=484.47  Aligned_cols=448  Identities=20%  Similarity=0.279  Sum_probs=358.9

Q ss_pred             CCCCC-CCCccccchhhcCCChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccceeeecc
Q 045756           35 LPPGP-PKLPIVGNLLQLSQLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAAVHLAY  113 (521)
Q Consensus        35 ~pp~p-~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~  113 (521)
                      .||-- .++||+|++..++++|..+++++++|||+||++.++|+.+.++.+|+....++......++............+
T Consensus        32 ~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~vF  111 (486)
T KOG0684|consen   32 EPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPVF  111 (486)
T ss_pred             CCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhhc
Confidence            35544 56999999999999999999999999999999999999999999999999999666455554443334444556


Q ss_pred             CCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHHHhhcc
Q 045756          114 GCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTRMLLGK  193 (521)
Q Consensus       114 g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~  193 (521)
                      | ++.+....+....++.+.+ ...+....++++.+.|.+++.+.+..-  ..++|.+..+.++...+.+.+.-..++|+
T Consensus       112 g-~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~--~~~s~~~d~l~~~~~~ii~tAs~~ll~~e  187 (486)
T KOG0684|consen  112 G-KGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETS--LGESGETDGLYTFCRLIIFTASRLLLGGE  187 (486)
T ss_pred             C-CCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhcc--cccccchhHhhhhhHHHhhhhHHHhhhhh
Confidence            5 3445555566777777777 477889999999999999999988871  12256777788888888888888888887


Q ss_pred             eecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCC
Q 045756          194 QYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRKARKDKRNSV  273 (521)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  273 (521)
                      .....       .........++.....  .+...+|.  +++ ....++..++++++.+.+.+.+.++++..       
T Consensus       188 ~r~~~-------d~~~a~l~~dLd~~F~--~~d~~FP~--~LP-~~~~r~~~ra~~~i~k~f~~~i~~rr~s~-------  248 (486)
T KOG0684|consen  188 VRDQL-------DADVAKLYHDLDQGFQ--PFDFLFPY--NLP-IPLLRRRDRARKKISKIFSKIILDRRASI-------  248 (486)
T ss_pred             hhhhh-------cchHHHHHHHHhcccc--chHhhccc--CCC-cchhhhHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence            66442       2233333444433221  12223443  222 22246666888999999988888887754       


Q ss_pred             CccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCC
Q 045756          274 NEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDSVVGPNRM  353 (521)
Q Consensus       274 ~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~  353 (521)
                         +....|+++.+++.. ++ +.+.+++|++..++..+|||+.|+++|.+|++++|++|||+++++++|++++++++..
T Consensus       249 ---s~~~~dmlq~l~~~y-~d-g~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~  323 (486)
T KOG0684|consen  249 ---SKWDNDMLQSLMEKY-KD-GRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKE  323 (486)
T ss_pred             ---ccccHHHHHHHHHHh-hc-CCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCC
Confidence               234568999998822 22 3568999999999999999999999999999999999999999999999999987655


Q ss_pred             -CCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccc----eeeCCCCEEEeeeccccCCCCCCCCCCCCCCCc
Q 045756          354 -VNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTING----YHIPAKTRVFINTHGLGRNTRIWNDIEQFRPER  428 (521)
Q Consensus       354 -~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R  428 (521)
                       +++++|++||.|++||+|||||+||.+. ..|.+.+|+++.+    |.||+|..|++++..+|+||++||||++|+|+|
T Consensus       324 ~l~~d~L~~lplL~~~IkEtLRL~~p~~~-~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dR  402 (486)
T KOG0684|consen  324 KLTYDQLKDLPLLDSCIKETLRLHPPAHS-LMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDR  402 (486)
T ss_pred             CCCHHHHhcchHHHHHHHHHHhcCCchhh-HHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhh
Confidence             9999999999999999999999999887 8999999999955    999999999999999999999999999999999


Q ss_pred             cccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccCCce
Q 045756          429 HWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPKAQPLL  508 (521)
Q Consensus       429 f~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (521)
                      |+++++++......-.+.|||||+|.|.|||+.||.+|+|.++..+|++||+++.++ ..+.++++.   .++.|.+++.
T Consensus       403 f~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~s~---~v~~P~g~v~  478 (486)
T KOG0684|consen  403 FLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDYSR---MVMQPEGDVR  478 (486)
T ss_pred             ccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCHHH---hhcCCCCCce
Confidence            998776653322445567899999999999999999999999999999999999987 334556554   3788999999


Q ss_pred             eeecccC
Q 045756          509 ALPRPRL  515 (521)
Q Consensus       509 ~~~~~r~  515 (521)
                      ++.+.|+
T Consensus       479 irYK~R~  485 (486)
T KOG0684|consen  479 IRYKRRP  485 (486)
T ss_pred             EEEeecC
Confidence            9999886


No 26 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=9.6e-70  Score=533.16  Aligned_cols=462  Identities=22%  Similarity=0.347  Sum_probs=356.3

Q ss_pred             CCCCCCCCCCCccccchhhc-----CCChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCccc
Q 045756           32 TKRLPPGPPKLPIVGNLLQL-----SQLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTL  106 (521)
Q Consensus        32 ~~~~pp~p~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~  106 (521)
                      ..+.=.|-.++|++|..+++     .+.++..+.+++++||+++++++++.+.++++||+++++|+.+....|.++....
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~   89 (489)
T PLN02936         10 LNRLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAE   89 (489)
T ss_pred             hhccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhh
Confidence            34445678899999988877     6678999999999999999999999999999999999999977666776554221


Q ss_pred             ceeeeccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHH-HHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHH
Q 045756          107 AAVHLAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVT-HRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNN  185 (521)
Q Consensus       107 ~~~~~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~  185 (521)
                      . .....|  +.++..+|+.|+++|+.+ .+.|+..++..+.+ .+.++++++++.+.+...+++++|+.++++.+++++
T Consensus        90 ~-~~~~~~--~~i~~~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dv  165 (489)
T PLN02936         90 V-SEFLFG--SGFAIAEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDV  165 (489)
T ss_pred             h-hHHHhc--CccccCCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHH
Confidence            1 111122  345667799999999998 58889888888765 678888999999876654567899999999999999


Q ss_pred             HHHHhhcceecCCCCCChhHHHHHHHHHHHHHHHhhhccccccccccc-----ccCCcchHHHHHHHHHHHHHHHHHHHH
Q 045756          186 VTRMLLGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWR-----WVDPHGCEKKMREVEKRVDDFHTKIIE  260 (521)
Q Consensus       186 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~  260 (521)
                      ++.++||.++......     .++...+......... .....+|++.     ++.+  ..++..++.+.+.+++.+.++
T Consensus       166 i~~~~fG~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p--~~~~~~~~~~~i~~~~~~~i~  237 (489)
T PLN02936        166 IGLSVFNYNFDSLTTD-----SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISP--RQIKAEKAVTVIRETVEDLVD  237 (489)
T ss_pred             HHHHHcCCCccccccC-----cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccCh--hhHHHHHHHHHHHHHHHHHHH
Confidence            9999999998653211     1222322222222111 1111233221     1111  245677788888899999888


Q ss_pred             HHHHhhhhhccCCCc---cCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHH
Q 045756          261 EHRKARKDKRNSVNE---EDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRIL  337 (521)
Q Consensus       261 ~~~~~~~~~~~~~~~---~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q  337 (521)
                      ++++...+.......   ......|+++.|++..+     .++.+++.++++++++||+|||+++++|++++|++||++|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~-----~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~  312 (489)
T PLN02936        238 KCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASRE-----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEAL  312 (489)
T ss_pred             HHHHHHhhcccccccccccccCchHHHHHHHhccc-----cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHH
Confidence            777543221111000   01234689999987532     3889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhCCCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCC
Q 045756          338 RKIQEELDSVVGPNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRI  417 (521)
Q Consensus       338 ~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~  417 (521)
                      +++|+|+++++++ ..++++++++||||+|||+||||++|+++.+.+|.+.+|+.++||.||||+.|+++.+++||||++
T Consensus       313 ~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~  391 (489)
T PLN02936        313 RKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEV  391 (489)
T ss_pred             HHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhh
Confidence            9999999999874 457889999999999999999999999998777777788888999999999999999999999999


Q ss_pred             CCCCCCCCCCccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccc
Q 045756          418 WNDIEQFRPERHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVY  497 (521)
Q Consensus       418 ~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  497 (521)
                      ||||++|+||||+.+++....  ...+..|+|||.|+|.|+|++||+.|++++++.|+++|+++++++.   ....  ..
T Consensus       392 ~~dP~~F~PeRwl~~~~~~~~--~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~---~~~~--~~  464 (489)
T PLN02936        392 WERAEEFVPERFDLDGPVPNE--TNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ---DIVM--TT  464 (489)
T ss_pred             CCCccccCccccCCCCCCccc--cCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC---ccce--ec
Confidence            999999999999853321110  1234589999999999999999999999999999999999987653   2222  22


Q ss_pred             cccccccCCceeeecccCCCC
Q 045756          498 GMTMPKAQPLLALPRPRLADH  518 (521)
Q Consensus       498 ~~~~~~~~~~~~~~~~r~~~~  518 (521)
                      ++++.+++++.|++++|..++
T Consensus       465 ~~~~~~~~~~~v~~~~R~~~~  485 (489)
T PLN02936        465 GATIHTTNGLYMTVSRRRVPD  485 (489)
T ss_pred             ceEEeeCCCeEEEEEeeeCCC
Confidence            456678889999999998764


No 27 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=2.1e-69  Score=535.34  Aligned_cols=439  Identities=19%  Similarity=0.278  Sum_probs=343.5

Q ss_pred             CCCCCCCCCCCCccccchhhc-----CCChhHHHHHHHHHhCC--eEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCC
Q 045756           31 QTKRLPPGPPKLPIVGNLLQL-----SQLPHRDLASLCDKYGP--LVYLRLGSVDAITTNDPDIIREILLRQDEVFASRP  103 (521)
Q Consensus        31 ~~~~~pp~p~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~  103 (521)
                      ...+.||||+++|++|++..+     ..+++.++.+++++||+  +|++++++.+.++++||+++++++.++ +.|.+..
T Consensus        39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~  117 (490)
T PLN02302         39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGW  117 (490)
T ss_pred             CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCC
Confidence            345679999999999998876     34788899999999997  799999999999999999999999765 4444332


Q ss_pred             cccceeeeccCCCCeEecCCChhHHHHHHHHhhhcc-chhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHH
Q 045756          104 RTLAAVHLAYGCGDVALAPLGPHWKRMRRICMENLL-TTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFS  182 (521)
Q Consensus       104 ~~~~~~~~~~g~~~~~~~~~g~~~~~~R~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~  182 (521)
                      ......  .+|. ..++..+|+.|+++|+.+. +.| +.+.++.+.+.+.+.++++++.+..    ++.+|+.++++.++
T Consensus       118 ~~~~~~--~~g~-~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~~~  189 (490)
T PLN02302        118 PESTVE--LIGR-KSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRKLT  189 (490)
T ss_pred             chhHHH--Hhcc-ccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHHHH
Confidence            111111  2332 3345567999999999986 666 5788999999999999999988753    34699999999999


Q ss_pred             HHHHHHHhhcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 045756          183 MNNVTRMLLGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEH  262 (521)
Q Consensus       183 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  262 (521)
                      +++++.++||.+...       ....+.............  ....+|.       ....+..++.+.+.+++.+.++++
T Consensus       190 ~~vi~~~~~G~~~~~-------~~~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~l~~~~~~~i~~~  253 (490)
T PLN02302        190 FKIIMYIFLSSESEL-------VMEALEREYTTLNYGVRA--MAINLPG-------FAYHRALKARKKLVALFQSIVDER  253 (490)
T ss_pred             HHHHHHHHcCCCChH-------HHHHHHHHHHHHHHHhhh--CCcCCCc-------hhhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999987532       222222222222111110  0011121       112445566788888888888887


Q ss_pred             HHhhhhhccCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHH
Q 045756          263 RKARKDKRNSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQE  342 (521)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~  342 (521)
                      ++....      +......|+++.+++..++++ ..++++++..+++.+++||+|||+++++|++++|++||++|+|+|+
T Consensus       254 ~~~~~~------~~~~~~~d~l~~ll~~~~~~~-~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~  326 (490)
T PLN02302        254 RNSRKQ------NISPRKKDMLDLLLDAEDENG-RKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKA  326 (490)
T ss_pred             HHhhhc------cCCCCcCCHHHHHHhhhccCC-CCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            654321      111235689999998754432 4589999999999999999999999999999999999999999999


Q ss_pred             HHHHhhCCC----CCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCC
Q 045756          343 ELDSVVGPN----RMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIW  418 (521)
Q Consensus       343 Ei~~~~~~~----~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~  418 (521)
                      |++++++..    ..++++++++||||+|||+|+||++|+++. ..|.+.+|++++||.||||+.|+++.+++||||++|
T Consensus       327 E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~  405 (490)
T PLN02302        327 EQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLT-VFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVY  405 (490)
T ss_pred             HHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc-chhcccCCEeECCEEECCCCEEEeeHHHhcCCcccC
Confidence            999998632    237889999999999999999999999998 689999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccccc
Q 045756          419 NDIEQFRPERHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYG  498 (521)
Q Consensus       419 ~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  498 (521)
                      +||++|+||||+...        ..+..|+|||+|+|.|+|++||..|++++++.|+++|++++.++.    ..+..  .
T Consensus       406 ~dP~~F~PeR~~~~~--------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~----~~~~~--~  471 (490)
T PLN02302        406 PNPKEFDPSRWDNYT--------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG----CKVMY--L  471 (490)
T ss_pred             CCccccChhhcCCCC--------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC----Cccee--C
Confidence            999999999998422        234579999999999999999999999999999999999987542    12222  2


Q ss_pred             ccccccCCceeeecccCC
Q 045756          499 MTMPKAQPLLALPRPRLA  516 (521)
Q Consensus       499 ~~~~~~~~~~~~~~~r~~  516 (521)
                      .+..|.+++.+++++|..
T Consensus       472 ~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        472 PHPRPKDNCLARITKVAS  489 (490)
T ss_pred             CCCCCCCCceEEEEeccC
Confidence            236788899999998864


No 28 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.8e-69  Score=527.55  Aligned_cols=438  Identities=22%  Similarity=0.270  Sum_probs=340.5

Q ss_pred             CCCCCCCCCCCCccccchhhc-----CCChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcc
Q 045756           31 QTKRLPPGPPKLPIVGNLLQL-----SQLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRT  105 (521)
Q Consensus        31 ~~~~~pp~p~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~  105 (521)
                      ++.+.||||.++|++|+++.+     ..+++.++.+++++||+||++++++.+.++++||+++++++.++...+..+...
T Consensus         4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~   83 (452)
T PLN03141          4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPK   83 (452)
T ss_pred             CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCch
Confidence            356678899999999999887     246889999999999999999999999999999999999998877766543211


Q ss_pred             cceeeeccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhh-HHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHH
Q 045756          106 LAAVHLAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESF-VTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMN  184 (521)
Q Consensus       106 ~~~~~~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~  184 (521)
                        ......|. ..++..+|+.|+++|+++. +.|+...+... .+.+.+.++++++.+.    .++.+|+.+.+..++++
T Consensus        84 --~~~~l~g~-~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  155 (452)
T PLN03141         84 --SLTELMGK-SSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR----DDPPVLVQDETKKIAFE  155 (452)
T ss_pred             --hHHHHhCc-ccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCEEhHHHHHHHHHH
Confidence              11112332 3456667999999999985 67777777653 4455555555554432    35679999999999999


Q ss_pred             HHHHHhhcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 045756          185 NVTRMLLGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRK  264 (521)
Q Consensus       185 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  264 (521)
                      +++.++||.+...       ....+......+.....      .+|.  ++ +.....+..++.+++.+++.+.++++++
T Consensus       156 vi~~~~~G~~~~~-------~~~~~~~~~~~~~~~~~------~~~~--~~-p~~~~~~~~~~~~~l~~~~~~~i~~~~~  219 (452)
T PLN03141        156 VLVKALISLEPGE-------EMEFLKKEFQEFIKGLM------SLPI--KL-PGTRLYRSLQAKKRMVKLVKKIIEEKRR  219 (452)
T ss_pred             HHHHHHcCCCchH-------HHHHHHHHHHHHhhhHH------hCcc--CC-CchHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999976521       22333333333322211      1121  11 1111245556788999999999988876


Q ss_pred             hhhhhccCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHH
Q 045756          265 ARKDKRNSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEEL  344 (521)
Q Consensus       265 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei  344 (521)
                      .......   .......|+++.+++...    ..++++++..+++.+++||+|||+++++|++++|+.||++|+++++|+
T Consensus       220 ~~~~~~~---~~~~~~~d~l~~ll~~~~----~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei  292 (452)
T PLN03141        220 AMKNKEE---DETGIPKDVVDVLLRDGS----DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEEN  292 (452)
T ss_pred             HHhccCc---cccCChhhHHHHHHhcCC----CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence            5421100   000124689999987542    348999999999999999999999999999999999999999999999


Q ss_pred             HHhhC----CCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCC
Q 045756          345 DSVVG----PNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWND  420 (521)
Q Consensus       345 ~~~~~----~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~  420 (521)
                      +++.+    .++.++++++.+||||+|||+|+||+||+++. ++|.+.+|++++||.||||+.|+++.+++||||++|+|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~d  371 (452)
T PLN03141        293 MKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDN  371 (452)
T ss_pred             HHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCC
Confidence            98753    24457889999999999999999999999986 78999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccccccc
Q 045756          421 IEQFRPERHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMT  500 (521)
Q Consensus       421 p~~F~p~Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  500 (521)
                      |++|+||||++++.        .+..|+|||+|+|.|+|++||..|++++++.|+++|+|++.++.   ..   .  ..+
T Consensus       372 P~~F~PeRfl~~~~--------~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~---~~---~--~~~  435 (452)
T PLN03141        372 PYQFNPWRWQEKDM--------NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT---IV---N--FPT  435 (452)
T ss_pred             ccccCcccccCCCC--------CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC---ee---e--ccc
Confidence            99999999985321        24579999999999999999999999999999999999986542   11   1  246


Q ss_pred             ccccCCceeeecccCC
Q 045756          501 MPKAQPLLALPRPRLA  516 (521)
Q Consensus       501 ~~~~~~~~~~~~~r~~  516 (521)
                      +.|..++.+++++|.+
T Consensus       436 ~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        436 VRMKRKLPIWVTRIDD  451 (452)
T ss_pred             ccCCCCceEEEEeCCC
Confidence            7888999999999954


No 29 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=4.4e-69  Score=522.99  Aligned_cols=435  Identities=20%  Similarity=0.285  Sum_probs=335.9

Q ss_pred             CCCCCCCCCCCccccchhhcC-----CChhHHHHHHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCccc
Q 045756           32 TKRLPPGPPKLPIVGNLLQLS-----QLPHRDLASLCDKYGPLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTL  106 (521)
Q Consensus        32 ~~~~pp~p~~~p~~G~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~  106 (521)
                      +.+.||||.++|++|+++.+.     .++..++.+++++||++++++++++++++|+||+++++++.++.+.|.++....
T Consensus        28 ~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~  107 (472)
T PLN02987         28 RMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGS  107 (472)
T ss_pred             CCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHH
Confidence            445688999999999998762     468889999999999999999999999999999999999988877775543211


Q ss_pred             ceeeeccCCCCeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHH
Q 045756          107 AAVHLAYGCGDVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNV  186 (521)
Q Consensus       107 ~~~~~~~g~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i  186 (521)
                      ..  ...|. +.++..+|+.|+++|+++. +.++.+.++.+..   .++.++++...+..  .+++++.+.++.++++++
T Consensus       108 ~~--~~lg~-~~l~~~~g~~wr~~R~~~~-~f~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~v~~~~~~~~~t~~vi  178 (472)
T PLN02987        108 IS--NLLGK-HSLLLMKGNLHKKMHSLTM-SFANSSIIKDHLL---LDIDRLIRFNLDSW--SSRVLLMEEAKKITFELT  178 (472)
T ss_pred             HH--HHhCc-ccccccCcHHHHHHHHHHH-HhcChHHHHHHHH---HHHHHHHHHHHHhh--ccceehHHHHHHHHHHHH
Confidence            11  12342 3355557999999999974 5545555554432   22333333322221  246999999999999999


Q ss_pred             HHHhhcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 045756          187 TRMLLGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRKAR  266 (521)
Q Consensus       187 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  266 (521)
                      ++++||.+...       ....+...+.......    ....+|++     ....++..++.+++.+++.++++++++..
T Consensus       179 ~~~~fg~~~~~-------~~~~~~~~~~~~~~~~----~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~  242 (472)
T PLN02987        179 VKQLMSFDPGE-------WTESLRKEYVLVIEGF----FSVPLPLF-----STTYRRAIQARTKVAEALTLVVMKRRKEE  242 (472)
T ss_pred             HHHHcCCCChH-------HHHHHHHHHHHHHhhh----hcCCCcCC-----CchHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99999976532       1222222222221111    11223432     12256778889999999999999887643


Q ss_pred             hhhccCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 045756          267 KDKRNSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDS  346 (521)
Q Consensus       267 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~  346 (521)
                      ..       +.....|+++.+++...     +++++|+.++++.+++||+|||+++++|++++|++||++|+++++|+++
T Consensus       243 ~~-------~~~~~~d~l~~ll~~~~-----~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~  310 (472)
T PLN02987        243 EE-------GAEKKKDMLAALLASDD-----GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEK  310 (472)
T ss_pred             hc-------cCcccccHHHHHHhcCC-----CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            21       11234689999997632     4899999999999999999999999999999999999999999999999


Q ss_pred             hhC---CCCCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCCCC
Q 045756          347 VVG---PNRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDIEQ  423 (521)
Q Consensus       347 ~~~---~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  423 (521)
                      +.+   ++..++++++.+||||+||++||||++|+++. ..|.+.+|++++||.||||+.|+++.+++||||++|+||++
T Consensus       311 ~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~  389 (472)
T PLN02987        311 IRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDART  389 (472)
T ss_pred             HHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccc
Confidence            875   23457889999999999999999999999986 78999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccc
Q 045756          424 FRPERHWLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPK  503 (521)
Q Consensus       424 F~p~Rf~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  503 (521)
                      |+||||+...+.     ......|+|||+|+|.|+|++||..|++++++.|+++|+|++.++.   +..+    ..++.|
T Consensus       390 F~PeRfl~~~~~-----~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~----~~~~~p  457 (472)
T PLN02987        390 FNPWRWQSNSGT-----TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD---KLVF----FPTTRT  457 (472)
T ss_pred             cCcccCCCCCCC-----CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC---ceee----cccccC
Confidence            999999853321     1234579999999999999999999999999999999999987653   2211    337889


Q ss_pred             cCCceeeecccCC
Q 045756          504 AQPLLALPRPRLA  516 (521)
Q Consensus       504 ~~~~~~~~~~r~~  516 (521)
                      .+++.+++++|..
T Consensus       458 ~~~~~~~~~~r~~  470 (472)
T PLN02987        458 QKRYPINVKRRDV  470 (472)
T ss_pred             CCCceEEEEeccc
Confidence            8899999999854


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.2e-67  Score=516.98  Aligned_cols=443  Identities=20%  Similarity=0.254  Sum_probs=337.0

Q ss_pred             CCccccchhhcCCChhHHHHHHHHHhC-CeEEEEcCCccEEEEcCHHHHHHHHHhcCcccccCCcccceeeeccCCCCeE
Q 045756           41 KLPIVGNLLQLSQLPHRDLASLCDKYG-PLVYLRLGSVDAITTNDPDIIREILLRQDEVFASRPRTLAAVHLAYGCGDVA  119 (521)
Q Consensus        41 ~~p~~G~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~v~i~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~g~~~~~  119 (521)
                      ..++.|++.....+....+.++.++++ ..++++..+.  ++++||+.+++|+.++.+.|.+............|  ..+
T Consensus        48 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g--~gi  123 (502)
T PLN02426         48 RAYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG--RGI  123 (502)
T ss_pred             CCCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC--Cce
Confidence            356888877755566777777888887 5777776554  89999999999998776667654322211111223  346


Q ss_pred             ecCCChhHHHHHHHHhhhccchhhhhhhH--HHHHHHHHHHHHHHHhhcc--CCCceehHHHHHHHHHHHHHHHhhccee
Q 045756          120 LAPLGPHWKRMRRICMENLLTTKRLESFV--THRADEAKHLVQDVWGRAQ--SGKPVNLRDVLGAFSMNNVTRMLLGKQY  195 (521)
Q Consensus       120 ~~~~g~~~~~~R~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~~~--~~~~vdl~~~~~~~~~~~i~~~~fG~~~  195 (521)
                      ++.+|+.|+++|+.+ .+.|+.+.++.+.  +.+.+.++++++.+.+..+  ++..+|+.++++.+++|+++.++||.++
T Consensus       124 ~~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        124 FNVDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             eecCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence            778899999999998 5899999988874  5666777778777765432  2467999999999999999999999988


Q ss_pred             cCCCCCChhHHHHHHHHHHHHHHHhhhccccccccccc---ccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccC
Q 045756          196 FGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLPIWR---WVDPHGCEKKMREVEKRVDDFHTKIIEEHRKARKDKRNS  272 (521)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  272 (521)
                      +.....  ....++......+....... .....|++.   .+.+.+..++..++.+.+.+++.++++++++..      
T Consensus       203 ~~l~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~------  273 (502)
T PLN02426        203 GCLELS--LPISEFADAFDTASKLSAER-AMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG------  273 (502)
T ss_pred             cccCCC--CCccHHHHHHHHHHHHHHHH-HhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc------
Confidence            654321  11223444443332221110 011112211   111223356778888899999999998876531      


Q ss_pred             CCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhCCC-
Q 045756          273 VNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDSVVGPN-  351 (521)
Q Consensus       273 ~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~-  351 (521)
                          .....|+++.+++..       .+++++.++++++++||+|||+++++|++|+|++||++|+|||+|++++++++ 
T Consensus       274 ----~~~~~dll~~ll~~~-------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~  342 (502)
T PLN02426        274 ----FSASKDLLSRFMASI-------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQ  342 (502)
T ss_pred             ----cCCcchHHHHHHhcC-------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCC
Confidence                112468999999753       36789999999999999999999999999999999999999999999998753 


Q ss_pred             CCCCcccCCCCccHHHHHHhhhcCCCCCcccccccccccccc-cceeeCCCCEEEeeeccccCCCCCC-CCCCCCCCCcc
Q 045756          352 RMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTI-NGYHIPAKTRVFINTHGLGRNTRIW-NDIEQFRPERH  429 (521)
Q Consensus       352 ~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~Rf  429 (521)
                      ..++++++++||||+|||+||||++||++. ..|.+.+|..+ +|+.|||||.|.++.+++||||++| |||++|+||||
T Consensus       343 ~~~t~~~l~~LpYl~avi~EtLRl~p~v~~-~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRw  421 (502)
T PLN02426        343 EAASFEEMKEMHYLHAALYESMRLFPPVQF-DSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERW  421 (502)
T ss_pred             CCCCHHHHhcChHHHHHHHHHHhCCCCCCC-cceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCcccc
Confidence            368999999999999999999999999998 67999999887 9999999999999999999999999 99999999999


Q ss_pred             ccCCCCccccccCCceeeeeCCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccCCcee
Q 045756          430 WLADGSRVEISHGADFKILPFSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPKAQPLLA  509 (521)
Q Consensus       430 ~~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (521)
                      ++++. ..   ...+..|+|||+|+|.|+|++||+.|++++++.|+++|++++.++..+   ......++++.+++++.+
T Consensus       422 l~~~~-~~---~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~---~~~~~~~~~~~~~~gl~v  494 (502)
T PLN02426        422 LKNGV-FV---PENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNR---APRFAPGLTATVRGGLPV  494 (502)
T ss_pred             CCCCC-cC---CCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCC---CCcccceeEEecCCCEEE
Confidence            85221 00   224567999999999999999999999999999999999998643211   112223567889999999


Q ss_pred             eecccCC
Q 045756          510 LPRPRLA  516 (521)
Q Consensus       510 ~~~~r~~  516 (521)
                      ++++|..
T Consensus       495 ~~~~r~~  501 (502)
T PLN02426        495 RVRERVR  501 (502)
T ss_pred             EEEEccC
Confidence            9999854


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.6e-59  Score=450.50  Aligned_cols=408  Identities=17%  Similarity=0.196  Sum_probs=292.9

Q ss_pred             CCCCCCCCCCCccccchhhc-----CCChhHHHHHHHHHhCC-eEEEEcCCccE-------EEEcCHHHHHHHHHh----
Q 045756           32 TKRLPPGPPKLPIVGNLLQL-----SQLPHRDLASLCDKYGP-LVYLRLGSVDA-------ITTNDPDIIREILLR----   94 (521)
Q Consensus        32 ~~~~pp~p~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------v~i~~p~~i~~il~~----   94 (521)
                      +.+.|||+.++|++|+++++     ..++..++.+.++|||+ ||+++++|.+.       |+++||+.++.+|..    
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            44668999999999999864     45668999999999999 99999998665       999999999999964    


Q ss_pred             cCcccccCCcccceeeeccCCC--CeEecCCChhHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCce
Q 045756           95 QDEVFASRPRTLAAVHLAYGCG--DVALAPLGPHWKRMRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPV  172 (521)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~v  172 (521)
                      +.+.+....  ..... ..|..  .+++..+|+.|+++|+++. +.|+ ..++.+.+.|.+.++++++.|......+.++
T Consensus        95 ~~~~~~~~~--~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~v  169 (480)
T PLN02648         95 KRDVFTGTY--MPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKA  169 (480)
T ss_pred             ccccceeee--ccCcc-ccCCceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCc
Confidence            333333211  11112 34432  1566778999999999995 8888 5779999999999999999986542345579


Q ss_pred             ehHHHHHHHHHHHHHHHhhcceecCCCCCChhHHHHHHHHHHHHHHHhhhcccccccc-cccccC----CcchHHHHHHH
Q 045756          173 NLRDVLGAFSMNNVTRMLLGKQYFGGGSAGPEEAMEFMHITHELFRLLGVIYLGDYLP-IWRWVD----PHGCEKKMREV  247 (521)
Q Consensus       173 dl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~----~~~~~~~~~~~  247 (521)
                      |+.+.++.++++++++++||.+....     .-...+......+............+| ++....    +.. .....+.
T Consensus       170 dv~~~~~~lt~~vi~~~lfG~~~~~~-----~l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~-~~~~~~~  243 (480)
T PLN02648        170 EFNDPLDQMAFNFLCKALTGKDPSET-----ALGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLP-FFLVKSD  243 (480)
T ss_pred             cccchHHHHHHHHHHHHHcCCCcchh-----hhccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCc-hhhhhcc
Confidence            99999999999999999999865420     001111111111111000000000011 000000    000 0000011


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhccCCCccCCccchHHHHHhcCCCCCCCCCCCHHHHHHHHHH-HHHhcccchHHHHHHH
Q 045756          248 EKRVDDFHTKIIEEHRKARKDKRNSVNEEDGEAMDFVDVLLSLPGENGKEHMDDVEIKALIQD-MIAAATDTSAVTNEWA  326 (521)
Q Consensus       248 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~-~~~ag~~tt~~~l~~~  326 (521)
                      .+++.+++.+                         .++.++....+   .+++++|+.++++. ..+++++|++++++|+
T Consensus       244 ~~~~~~~~~~-------------------------~~~~ll~~~~~---~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~  295 (480)
T PLN02648        244 YDKLYDFFRA-------------------------SATEALDLAEK---FGISREEALHNLLFVLGFNAFGGFKIFFPAL  295 (480)
T ss_pred             HHHHHHHHHH-------------------------HHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence            1111111111                         11222322222   23999999999875 4456777788899999


Q ss_pred             HHHHhhChH-HHHHHHHHHHHhhCC-CCCCCcccCCCCccHHHHHHhhhcCCCCCccccccccccccccc----ceeeCC
Q 045756          327 MAEVIKHPR-ILRKIQEELDSVVGP-NRMVNEQDLPHLNYLRCVVRETFRMHPAGPFLILHESLRATTIN----GYHIPA  400 (521)
Q Consensus       327 l~~L~~~p~-~q~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~----g~~ip~  400 (521)
                      +|+|++||+ +|++||+|++++++. ++.++++++++||||++||+||||+||+++. ..|.+.+|++++    ||.|||
T Consensus       296 l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~-~~r~a~~d~~l~~~~~g~~Ipk  374 (480)
T PLN02648        296 LKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPF-QYGRAREDFVIESHDAAFEIKK  374 (480)
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccc-ccceecCCEEEecCCceEEECC
Confidence            999999995 999999999999863 4568999999999999999999999999998 678899999995    799999


Q ss_pred             CCEEEeeeccccCCCCCCCCCCCCCCCccccCCCCccccccCCceeeeeC---------CCCCCCCCChHHHHHHHHHHH
Q 045756          401 KTRVFINTHGLGRNTRIWNDIEQFRPERHWLADGSRVEISHGADFKILPF---------SAGKRKCPGAPLGITLVLMAL  471 (521)
Q Consensus       401 G~~v~~~~~~~~~d~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~A~~~~~~~l  471 (521)
                      |+.|+++.+.+||||++||||++|+|+||+++.++.       ...+++|         |+|+|.|+|++||+.|+++++
T Consensus       375 G~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~-------~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~l  447 (480)
T PLN02648        375 GEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEK-------LLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFV  447 (480)
T ss_pred             CCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccc-------cccccccCCCcccCCCCCCCccCccHHHHHHHHHHHH
Confidence            999999999999999999999999999998543221       1233333         677899999999999999999


Q ss_pred             HHHHhhcc-ccCCCCC
Q 045756          472 ARLFHCFD-WTPPEGL  486 (521)
Q Consensus       472 ~~ll~~f~-~~~~~~~  486 (521)
                      +.|+++|+ +++.++.
T Consensus       448 a~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        448 AELFLRYDSFEIEVDT  463 (480)
T ss_pred             HHHHHHhCEEeecCCc
Confidence            99999998 9987664


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=5.1e-55  Score=416.34  Aligned_cols=382  Identities=25%  Similarity=0.373  Sum_probs=302.4

Q ss_pred             hhHHHHHHHHHhCCeEEEEcCCcc--EEEEcCHHHHHHHHHhcCcccccCCcccce---eeeccCCCCeEecCCChhHHH
Q 045756           55 PHRDLASLCDKYGPLVYLRLGSVD--AITTNDPDIIREILLRQDEVFASRPRTLAA---VHLAYGCGDVALAPLGPHWKR  129 (521)
Q Consensus        55 ~~~~~~~~~~kyG~v~~~~~~~~~--~v~i~~p~~i~~il~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~g~~~~~  129 (521)
                      +......+.+.||.++.+...+..  ++++++++++++++.++. .+++.......   .....| ..+++..+|+.|++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~ll~~dg~~H~r  101 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLG-DGSLLTLDGPEHTR  101 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhcc-ccceeecCCHHHHH
Confidence            445555677788888887766654  899999999999996653 22222111111   122333 23377788999999


Q ss_pred             HHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHHHhhcceecCCCCCChhHHHHH
Q 045756          130 MRRICMENLLTTKRLESFVTHRADEAKHLVQDVWGRAQSGKPVNLRDVLGAFSMNNVTRMLLGKQYFGGGSAGPEEAMEF  209 (521)
Q Consensus       130 ~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~  209 (521)
                      +|+++ ++.|+++.++.+.+.+.+.++++++.+ . .  +...++.+....+++++|+ .+||.+..        +...+
T Consensus       102 ~Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~-~--~~~~~v~~~a~~l~~~vi~-~l~Gv~~~--------~~~~~  167 (411)
T COG2124         102 LRKLL-APAFTPRALRGYRPLIREIADRLLDDL-W-Q--GGADLVLDFAAELTLRVIA-ELLGVPLE--------DRPQL  167 (411)
T ss_pred             HHHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-c-c--CCchhHHHHhhhhhHHHHH-HHhCCCHH--------HHHHH
Confidence            99998 599999999999999999999999988 3 2  2678899999999999999 99999764        33344


Q ss_pred             HHHHHHHHHHhhhcccccccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCccchHHHHHhc
Q 045756          210 MHITHELFRLLGVIYLGDYLPIWRWVDPHGCEKKMREVEKRVDDFHTKIIEEHRKARKDKRNSVNEEDGEAMDFVDVLLS  289 (521)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~  289 (521)
                      ..+........        .|.   ..+.....+..++...+.+++.+++++++..             ...|+++.|+.
T Consensus       168 ~~~~~~~~~~~--------~~~---~~~~~~~~~~~~a~~~~~~~~~~li~~rR~~-------------~~~dlls~l~~  223 (411)
T COG2124         168 LRWSDALLLRL--------DPD---LGPEEPWRRARAARRELDAYLRALIAERRAA-------------PRDDLLSLLLS  223 (411)
T ss_pred             HHHHHHHHhcc--------Ccc---cCCcccHHHHHHHHHHHHHHHHHHHHHhccC-------------CcccHHHHHHH
Confidence            44333333220        011   1112225678899999999999999998833             24689999998


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCcccCCCCccHHHHH
Q 045756          290 LPGENGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELDSVVGPNRMVNEQDLPHLNYLRCVV  369 (521)
Q Consensus       290 ~~~~~~~~~l~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i  369 (521)
                      +.+++++ .+|++||.++++++++||+|||+++|+|++|.|++||+.++++++|.+.                ||+.+++
T Consensus       224 a~~~~~~-~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v  286 (411)
T COG2124         224 AEDDGGG-RLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVV  286 (411)
T ss_pred             HhhCCCC-cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHH
Confidence            8776542 6999999999999999999999999999999999999999999998775                7899999


Q ss_pred             HhhhcCCCCCcccccccccccccccceeeCCCCEEEeeeccccCCCCCCCCCCCCCCCccccCCCCccccccCCceeeee
Q 045756          370 RETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFINTHGLGRNTRIWNDIEQFRPERHWLADGSRVEISHGADFKILP  449 (521)
Q Consensus       370 ~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~~~  449 (521)
                      +||||+|||++. ..|.+.+|++++|+.||||+.|+++++++||||++|+||++|||+||.              ..|+|
T Consensus       287 ~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~--------------~~~l~  351 (411)
T COG2124         287 EETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN--------------NAHLP  351 (411)
T ss_pred             HHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC--------------CCCcC
Confidence            999999999999 999999999999999999999999999999999999999999999984              37899


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccCCceeeeccc
Q 045756          450 FSAGKRKCPGAPLGITLVLMALARLFHCFDWTPPEGLRPEDIDTSEVYGMTMPKAQPLLALPRPR  514 (521)
Q Consensus       450 Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  514 (521)
                      ||+|+|.|+|.+||++|++++++.|+++|++....+ . ....    ...+..+.....+.++.|
T Consensus       352 FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~-~~~~----~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         352 FGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-P-PPLV----RRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             CCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-C-CCcc----ccccccCCCcceeeeecC
Confidence            999999999999999999999999999999887654 1 1111    122345555555555543


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=68.30  E-value=15  Score=22.77  Aligned_cols=44  Identities=18%  Similarity=0.278  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHHHhcccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 045756          302 VEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPRILRKIQEELD  345 (521)
Q Consensus       302 ~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~  345 (521)
                      -++..++..++=.|.|-.+-.++-.+.+..-||+..+.+..|++
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            35566677777778888888888899999999999999888763


No 34 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=66.94  E-value=1.7  Score=36.71  Aligned_cols=45  Identities=24%  Similarity=0.244  Sum_probs=34.7

Q ss_pred             CCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEee
Q 045756          361 HLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFIN  407 (521)
Q Consensus       361 ~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~  407 (521)
                      .-....|||.|+.-...-..  +.-...+|+.++|..|||||.|+-.
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~--vrlRLle~i~i~g~~IPkgt~l~G~   95 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSR--VRLRLLEDIQIGGILIPKGTYLYGV   95 (200)
T ss_pred             CCCeEEEEEecceEEeCCCE--EEEEEcCceEECCEEeCCCCEEEEE
Confidence            45668889999988776554  2334478999999999999998863


No 35 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=58.57  E-value=59  Score=22.56  Aligned_cols=27  Identities=19%  Similarity=0.246  Sum_probs=16.1

Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhhccc
Q 045756            1 MDFATFALILLFSSIIADIIRRFQNQK   27 (521)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~~   27 (521)
                      |.++-.+++++++++++++++...++.
T Consensus         1 Mgl~Da~~~~V~V~IVclliya~YRR~   27 (92)
T PHA02681          1 MGLLDALLTVIVISIVCYIVIMMYRRS   27 (92)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            555555666666666666666554443


No 36 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=55.12  E-value=13  Score=23.88  Aligned_cols=23  Identities=22%  Similarity=0.511  Sum_probs=17.8

Q ss_pred             HHHHHhhChHHHHHHHHHHHHhh
Q 045756          326 AMAEVIKHPRILRKIQEELDSVV  348 (521)
Q Consensus       326 ~l~~L~~~p~~q~~lr~Ei~~~~  348 (521)
                      ++.+|..||++.++|.+.=.+++
T Consensus         5 iV~YLv~nPevl~kl~~g~asLI   27 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASLI   27 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeEe
Confidence            57789999999999987444443


No 37 
>PRK06789 flagellar motor switch protein; Validated
Probab=47.08  E-value=20  Score=24.66  Aligned_cols=40  Identities=5%  Similarity=0.099  Sum_probs=31.7

Q ss_pred             HHHhhhcCCCCCcccccccccccccc--cceeeCCCCEEEee
Q 045756          368 VVRETFRMHPAGPFLILHESLRATTI--NGYHIPAKTRVFIN  407 (521)
Q Consensus       368 ~i~EtlRl~p~~~~~~~r~~~~d~~i--~g~~ip~G~~v~~~  407 (521)
                      -++|-+.|.+....-.-|.+.+++.+  +|..|-+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            47899999998766566777665555  99999999999876


No 38 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=42.88  E-value=24  Score=27.39  Aligned_cols=23  Identities=17%  Similarity=0.303  Sum_probs=17.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHHhh
Q 045756          455 RKCPGAPLGITLVLMALARLFHC  477 (521)
Q Consensus       455 r~C~G~~~A~~~~~~~l~~ll~~  477 (521)
                      -.|.|++||+.++-.++.+|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            47999999999999999999973


No 39 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=42.43  E-value=87  Score=30.53  Aligned_cols=47  Identities=9%  Similarity=0.122  Sum_probs=25.8

Q ss_pred             ChhHHHHHHH-HHhCCeEEEEcCCccE-EEEcCHHHHHHHHHhcCccccc
Q 045756           54 LPHRDLASLC-DKYGPLVYLRLGSVDA-ITTNDPDIIREILLRQDEVFAS  101 (521)
Q Consensus        54 ~~~~~~~~~~-~kyG~v~~~~~~~~~~-v~i~~p~~i~~il~~~~~~~~~  101 (521)
                      +|...++-.. -+||.|++-.+.++.+ |=|..++..+. +.++.+.|+.
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs-~~~Ek~Iy~l  258 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQS-FQNEKNIYSL  258 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccCceeEEEecCHHHHHH-HHhHHHHHhc
Confidence            3344444333 3688888887776654 33455554444 4455556553


No 40 
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=41.46  E-value=99  Score=22.41  Aligned_cols=38  Identities=16%  Similarity=0.121  Sum_probs=30.3

Q ss_pred             cchHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhccc
Q 045756          280 AMDFVDVLLSLPGENGKEHMDDVEIKALIQDMIAAATD  317 (521)
Q Consensus       280 ~~d~l~~ll~~~~~~~~~~l~~~ei~~~~~~~~~ag~~  317 (521)
                      +++.++.+++..+.+++..++-.|....+..+..|.++
T Consensus        46 d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~~ac~~   83 (91)
T cd05024          46 DPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLLIACND   83 (91)
T ss_pred             CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHH
Confidence            56788999988888777789999988887777776654


No 41 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=36.85  E-value=11  Score=35.78  Aligned_cols=45  Identities=20%  Similarity=0.211  Sum_probs=34.6

Q ss_pred             CCccHHHHHHhhhcCCCCCcccccccccccccccceeeCCCCEEEee
Q 045756          361 HLNYLRCVVRETFRMHPAGPFLILHESLRATTINGYHIPAKTRVFIN  407 (521)
Q Consensus       361 ~lp~l~a~i~EtlRl~p~~~~~~~r~~~~d~~i~g~~ip~G~~v~~~  407 (521)
                      .-..+.|||.|+.=+.-...  +.-...+|+.++|..|||||.|+..
T Consensus       254 ~~n~I~A~V~~~qtv~~G~~--vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGSA--VKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCCceEEEEcCceEEecCCE--EEEEEcCceeeCCEEecCCCEEEEE
Confidence            45568889999988876543  2334478999999999999988755


No 42 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=36.52  E-value=62  Score=23.03  Aligned_cols=17  Identities=24%  Similarity=0.528  Sum_probs=15.0

Q ss_pred             hHHHHHHHHHHHHhhCC
Q 045756          334 PRILRKIQEELDSVVGP  350 (521)
Q Consensus       334 p~~q~~lr~Ei~~~~~~  350 (521)
                      |++.+.+|+||-+++..
T Consensus        36 pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          36 PDYLEQLRKEILEVISK   52 (88)
T ss_pred             cchHHHHHHHHHHHHHH
Confidence            89999999999999653


No 43 
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.91  E-value=1.3e+02  Score=21.44  Aligned_cols=34  Identities=15%  Similarity=0.216  Sum_probs=26.6

Q ss_pred             HHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHh
Q 045756           61 SLCDKYGPLVYLRLGSVDAITTNDPDIIREILLR   94 (521)
Q Consensus        61 ~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~   94 (521)
                      +..++||+|....--..-.++-++-+.+.+++.+
T Consensus        20 RqLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k   53 (90)
T COG4471          20 RQLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK   53 (90)
T ss_pred             HHHHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence            4457899999886665667777999999999744


No 44 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=33.41  E-value=51  Score=26.35  Aligned_cols=42  Identities=19%  Similarity=0.321  Sum_probs=29.1

Q ss_pred             ccccccccccceeeCCCCEEEeeec-------cccCCCCCCCCCCCCCCC
Q 045756          385 HESLRATTINGYHIPAKTRVFINTH-------GLGRNTRIWNDIEQFRPE  427 (521)
Q Consensus       385 r~~~~d~~i~g~~ip~G~~v~~~~~-------~~~~d~~~~~~p~~F~p~  427 (521)
                      -...+|+.++|..||+|+.-+..+.       .++++.+.|.. ..++|+
T Consensus        50 i~f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~   98 (145)
T PF11138_consen   50 ITFSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPS   98 (145)
T ss_pred             EEECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCch
Confidence            3457899999999999998877653       34566666644 344444


No 45 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=31.61  E-value=21  Score=22.47  Aligned_cols=10  Identities=40%  Similarity=0.913  Sum_probs=8.6

Q ss_pred             eeCCCCCCCC
Q 045756          448 LPFSAGKRKC  457 (521)
Q Consensus       448 ~~Fg~G~r~C  457 (521)
                      .+||-|.|.|
T Consensus        12 ~kfg~GsrsC   21 (56)
T KOG3506|consen   12 RKFGQGSRSC   21 (56)
T ss_pred             cccCCCCcce
Confidence            4699999988


No 46 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=29.73  E-value=36  Score=26.21  Aligned_cols=23  Identities=26%  Similarity=0.134  Sum_probs=18.6

Q ss_pred             ccccccccccceeeCCCCEEEee
Q 045756          385 HESLRATTINGYHIPAKTRVFIN  407 (521)
Q Consensus       385 r~~~~d~~i~g~~ip~G~~v~~~  407 (521)
                      -.+..|..++|-.||+|+.|+.-
T Consensus        71 ~I~~~d~~~~g~~i~~GtWv~~~   93 (122)
T PF14550_consen   71 YIAPEDMEIGGETIPKGTWVVGV   93 (122)
T ss_pred             EecCCCcccCCeeecceEEEEEE
Confidence            34566999999999999999643


No 47 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=29.04  E-value=64  Score=25.25  Aligned_cols=17  Identities=0%  Similarity=-0.009  Sum_probs=8.3

Q ss_pred             hHHHHHHHHHHHHHHHH
Q 045756            4 ATFALILLFSSIIADII   20 (521)
Q Consensus         4 ~~~~~~~~~~~~~~~~~   20 (521)
                      ++++++++++++++.++
T Consensus         5 ~~iii~~i~l~~~~~~~   21 (130)
T PF12273_consen    5 FAIIIVAILLFLFLFYC   21 (130)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            44555555555544433


No 48 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=28.04  E-value=1.5e+02  Score=22.25  Aligned_cols=10  Identities=40%  Similarity=0.398  Sum_probs=6.3

Q ss_pred             CCccccchhh
Q 045756           41 KLPIVGNLLQ   50 (521)
Q Consensus        41 ~~p~~G~~~~   50 (521)
                      .-|+.||+..
T Consensus        45 ~~p~YgNL~~   54 (107)
T PF15330_consen   45 DDPCYGNLEL   54 (107)
T ss_pred             CCcccccccc
Confidence            3677777543


No 49 
>PRK11677 hypothetical protein; Provisional
Probab=26.25  E-value=90  Score=24.57  Aligned_cols=23  Identities=26%  Similarity=0.375  Sum_probs=13.0

Q ss_pred             CchhHHHHHHHHHHHHHHHHHhh
Q 045756            1 MDFATFALILLFSSIIADIIRRF   23 (521)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~   23 (521)
                      |.+++.++.+++.+++.+++.++
T Consensus         1 M~W~~a~i~livG~iiG~~~~R~   23 (134)
T PRK11677          1 MTWEYALIGLVVGIIIGAVAMRF   23 (134)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhh
Confidence            66555555555555555555443


No 50 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=26.07  E-value=1.1e+02  Score=17.86  Aligned_cols=17  Identities=24%  Similarity=0.585  Sum_probs=11.6

Q ss_pred             HHHHHh-hChHHHHHHHH
Q 045756          326 AMAEVI-KHPRILRKIQE  342 (521)
Q Consensus       326 ~l~~L~-~~p~~q~~lr~  342 (521)
                      ++..++ +||++++.++.
T Consensus        18 lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   18 LLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHhChhHHHHHHh
Confidence            334444 89999988765


No 51 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=25.57  E-value=58  Score=18.03  Aligned_cols=16  Identities=25%  Similarity=0.534  Sum_probs=13.3

Q ss_pred             CceeeeeCCCCCCCCC
Q 045756          443 ADFKILPFSAGKRKCP  458 (521)
Q Consensus       443 ~~~~~~~Fg~G~r~C~  458 (521)
                      ....|+|+.+..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            4558999999999994


No 52 
>COG3423 Nlp Predicted transcriptional regulator [Transcription]
Probab=25.31  E-value=6.3  Score=26.76  Aligned_cols=31  Identities=19%  Similarity=0.247  Sum_probs=23.3

Q ss_pred             eeeCCCCEEEeeeccccCCCCCCCCCCCCCCCccccCCC
Q 045756          396 YHIPAKTRVFINTHGLGRNTRIWNDIEQFRPERHWLADG  434 (521)
Q Consensus       396 ~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~Rf~~~~~  434 (521)
                      ..-|||+.|+.....+        .|++-+|+||.+.+.
T Consensus        44 rp~pkgEriIA~algv--------~P~eIWp~RY~d~~~   74 (82)
T COG3423          44 RPWPKGERIIADALGV--------PPEEIWPSRYADPQT   74 (82)
T ss_pred             CCCchHHHHHHHHhCC--------CHHHhCchhhccccc
Confidence            4568888888777666        478889999986543


No 53 
>PRK02302 hypothetical protein; Provisional
Probab=25.27  E-value=2.3e+02  Score=20.48  Aligned_cols=34  Identities=21%  Similarity=0.213  Sum_probs=25.6

Q ss_pred             HHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHh
Q 045756           61 SLCDKYGPLVYLRLGSVDAITTNDPDIIREILLR   94 (521)
Q Consensus        61 ~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~   94 (521)
                      +..++||+|..+.--..-.++-+|-+.+.++..+
T Consensus        21 r~LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         21 RKLSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             HHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            3456899999886655666777899999988743


No 54 
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.22  E-value=86  Score=21.16  Aligned_cols=15  Identities=13%  Similarity=0.312  Sum_probs=5.9

Q ss_pred             CchhHHHHHHHHHHH
Q 045756            1 MDFATFALILLFSSI   15 (521)
Q Consensus         1 m~~~~~~~~~~~~~~   15 (521)
                      |+.+..+++.+++++
T Consensus         1 m~l~lail~ivl~ll   15 (71)
T COG3763           1 MSLWLAILLIVLALL   15 (71)
T ss_pred             ChhHHHHHHHHHHHH
Confidence            344444433333333


No 55 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=22.91  E-value=1.8e+02  Score=20.67  Aligned_cols=7  Identities=29%  Similarity=0.643  Sum_probs=4.0

Q ss_pred             CCCcccc
Q 045756           40 PKLPIVG   46 (521)
Q Consensus        40 ~~~p~~G   46 (521)
                      -.-|++|
T Consensus        65 IYrPvI~   71 (94)
T PF05393_consen   65 IYRPVIG   71 (94)
T ss_pred             ccccccc
Confidence            3456666


No 56 
>PF11044 TMEMspv1-c74-12:  Plectrovirus spv1-c74 ORF 12 transmembrane protein;  InterPro: IPR022743  This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function. 
Probab=22.75  E-value=1.9e+02  Score=17.43  Aligned_cols=14  Identities=7%  Similarity=-0.119  Sum_probs=7.8

Q ss_pred             CchhHHHHHHHHHH
Q 045756            1 MDFATFALILLFSS   14 (521)
Q Consensus         1 m~~~~~~~~~~~~~   14 (521)
                      ||++...+..++.+
T Consensus         1 mp~wlt~iFsvvIi   14 (49)
T PF11044_consen    1 MPTWLTTIFSVVII   14 (49)
T ss_pred             CchHHHHHHHHHHH
Confidence            67766555444433


No 57 
>PRK02886 hypothetical protein; Provisional
Probab=22.68  E-value=2.8e+02  Score=19.94  Aligned_cols=34  Identities=18%  Similarity=0.261  Sum_probs=25.4

Q ss_pred             HHHHHhCCeEEEEcCCccEEEEcCHHHHHHHHHh
Q 045756           61 SLCDKYGPLVYLRLGSVDAITTNDPDIIREILLR   94 (521)
Q Consensus        61 ~~~~kyG~v~~~~~~~~~~v~i~~p~~i~~il~~   94 (521)
                      +..++||+|..+.--..-.++-+|-+.+.++..+
T Consensus        19 r~LrkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k   52 (87)
T PRK02886         19 KQLRKFGNVHYVSKRLKYAVLYCDMEQVEDIMNK   52 (87)
T ss_pred             HHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            3456899999886555666777899999988743


No 58 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=22.41  E-value=1.2e+02  Score=18.18  Aligned_cols=19  Identities=11%  Similarity=0.420  Sum_probs=15.4

Q ss_pred             HHHHHHHHhhChHHHHHHH
Q 045756          323 NEWAMAEVIKHPRILRKIQ  341 (521)
Q Consensus       323 l~~~l~~L~~~p~~q~~lr  341 (521)
                      -.|-+..++++||+|.-|.
T Consensus        12 gl~gl~~~l~DpdvqrgL~   30 (42)
T PF07849_consen   12 GLFGLLRALRDPDVQRGLG   30 (42)
T ss_pred             CHHHHHHHHcCHHHHHHHH
Confidence            3477888899999998875


No 59 
>PRK05933 type III secretion system protein; Validated
Probab=22.00  E-value=85  Score=28.73  Aligned_cols=44  Identities=11%  Similarity=0.101  Sum_probs=33.3

Q ss_pred             cHHHHHHhhhcCCCCCcccccccc-cc--cccccceeeCCCCEEEee
Q 045756          364 YLRCVVRETFRMHPAGPFLILHES-LR--ATTINGYHIPAKTRVFIN  407 (521)
Q Consensus       364 ~l~a~i~EtlRl~p~~~~~~~r~~-~~--d~~i~g~~ip~G~~v~~~  407 (521)
                      -...-|+|.|+|.+....-+-|.+ -+  |+.++|..|.+|..|.++
T Consensus       316 RT~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        316 RYSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             cccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            455679999999998766444553 34  555699999999999876


No 60 
>KOG0426 consensus Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=21.98  E-value=2.3e+02  Score=21.74  Aligned_cols=14  Identities=14%  Similarity=0.290  Sum_probs=11.5

Q ss_pred             HHHHHHHHHHHhhC
Q 045756          336 ILRKIQEELDSVVG  349 (521)
Q Consensus       336 ~q~~lr~Ei~~~~~  349 (521)
                      .+.+|.+|.+++..
T Consensus         5 AlkRLm~EykqLt~   18 (165)
T KOG0426|consen    5 ALKRLMAEYKQLTL   18 (165)
T ss_pred             HHHHHHHHHHHHcc
Confidence            57889999999864


No 61 
>PF04798 Baculo_19:  Baculovirus 19 kDa protein conserved region;  InterPro: IPR006883 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf96; it is a family of uncharacterised viral proteins.
Probab=21.11  E-value=40  Score=26.64  Aligned_cols=22  Identities=14%  Similarity=0.326  Sum_probs=17.5

Q ss_pred             CceeeeeCCCCCCCCCChHHHHH
Q 045756          443 ADFKILPFSAGKRKCPGAPLGIT  465 (521)
Q Consensus       443 ~~~~~~~Fg~G~r~C~G~~~A~~  465 (521)
                      .-+.|+- |.+.|.||++.+|..
T Consensus        56 ~lYyYle-gss~~~CP~nE~avV   77 (146)
T PF04798_consen   56 TLYYYLE-GSSSVFCPPNEFAVV   77 (146)
T ss_pred             eEEEEEe-ccccccCCCCceEEE
Confidence            4567778 999999998887754


No 62 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=20.76  E-value=46  Score=22.26  Aligned_cols=15  Identities=13%  Similarity=0.505  Sum_probs=12.4

Q ss_pred             CccHHHHHHhhhcCC
Q 045756          362 LNYLRCVVRETFRMH  376 (521)
Q Consensus       362 lp~l~a~i~EtlRl~  376 (521)
                      .-+++.+|+|++|+.
T Consensus        40 ~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   40 KQFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            467889999999973


No 63 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=20.23  E-value=2.3e+02  Score=20.37  Aligned_cols=17  Identities=18%  Similarity=0.606  Sum_probs=15.0

Q ss_pred             ChHHHHHHHHHHHHhhC
Q 045756          333 HPRILRKIQEELDSVVG  349 (521)
Q Consensus       333 ~p~~q~~lr~Ei~~~~~  349 (521)
                      .|++++.+++||-+++.
T Consensus        35 ~p~~l~~lk~eil~VIs   51 (87)
T PRK13991         35 TPEMMEQMKADLAEVIK   51 (87)
T ss_pred             CHHHHHHHHHHHHHHHH
Confidence            59999999999999865


No 64 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=20.13  E-value=2.4e+02  Score=17.64  Aligned_cols=34  Identities=9%  Similarity=0.121  Sum_probs=23.2

Q ss_pred             HHHHHHhCCeEEEEcCCc----cEEEEcCHHHHHHHHH
Q 045756           60 ASLCDKYGPLVYLRLGSV----DAITTNDPDIIREILL   93 (521)
Q Consensus        60 ~~~~~kyG~v~~~~~~~~----~~v~i~~p~~i~~il~   93 (521)
                      .+...+||+|-.+.+...    -+|-..+++.++....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            466789999888775442    3555678888887763


No 65 
>PRK14759 potassium-transporting ATPase subunit F; Provisional
Probab=20.12  E-value=1.7e+02  Score=15.92  Aligned_cols=20  Identities=0%  Similarity=-0.182  Sum_probs=8.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhc
Q 045756            6 FALILLFSSIIADIIRRFQN   25 (521)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~   25 (521)
                      .+..++.+.++.+++..+.+
T Consensus         6 ~l~~~va~~L~vYL~~ALlr   25 (29)
T PRK14759          6 SLAGAVSLGLLIYLTYALLR   25 (29)
T ss_pred             HHHHHHHHHHHHHHHHHHhC
Confidence            33333334344444444433


Done!