BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045757
(548 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q944S1|RH22_ARATH DEAD-box ATP-dependent RNA helicase 22 OS=Arabidopsis thaliana
GN=RH22 PE=2 SV=1
Length = 581
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/561 (59%), Positives = 414/561 (73%), Gaps = 26/561 (4%)
Query: 1 MILHRSSSMFHFYKLSS--PPKLLSKFNASSSCLSNSAPSSFYPLRVRFLRLNQWKGRPF 58
MIL RS S+ H +SS P KLLS+ S L+ + SF R LN+ +
Sbjct: 1 MILSRSVSVLHLCGVSSSAPSKLLSQRFKVSFALAYGSSVSF-----RLSSLNRSDRKWV 55
Query: 59 RGFAAAAAVVSDKNGSSDTFFADDNVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPV 118
RGFA+A +K G+ DTFFAD V+WKSLGLSD + AL +SGF RPS+ QA + +
Sbjct: 56 RGFASATEAEVEKKGN-DTFFADHTVSWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSI 114
Query: 119 LSGKDVVIAAETGSGKTHSYLVPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVL 178
LSGKDV++AAETGSGKTH YL P+I++L DSE +N ++ P P + SL+LCPNV+L
Sbjct: 115 LSGKDVIVAAETGSGKTHGYLAPIIDQLTNTALDSEVTNREERPFPLKNISLILCPNVML 174
Query: 179 CEQVVRMANALSADNGEPLVRAVAVCGGQGWPIGKPDVIVSTPAALLNNIDPKRRRRMEF 238
CEQVVRM N L ++G PL+R AVCG QGWP PD+IVSTPAALLNNI+PKR RR+EF
Sbjct: 175 CEQVVRMVNGLVDEDGNPLLRVEAVCGSQGWPDRLPDIIVSTPAALLNNIEPKRNRRLEF 234
Query: 239 VRGVKYVVFDEADMLLCGSFQNQVIRLINMFRFDEKQLSRMNESGVEKPLEMDNSSLTQP 298
+R VKYVVFDEADMLLCGSFQNQ+IRLINM RFDEKQ+SR+ +S + +P+E+D +S+ Q
Sbjct: 235 LRCVKYVVFDEADMLLCGSFQNQIIRLINMLRFDEKQVSRLAKSNLGRPMEID-ASVPQI 293
Query: 299 DLQDEENLQDEYISDEGNFEG-----------DSDVEGLTEETKSGSIKKKDWRRVRKNY 347
DL++E++ + DEG+ D + + E ++GS KK WRRVRK Y
Sbjct: 294 DLENEDDAE----FDEGSISEEEDEEEEEEYLDDIAQMPSVEAEAGSDTKKGWRRVRKIY 349
Query: 348 QRSKQYIFVAATLPINGKKTAGAVLKQMFPDADWISGNYLHFHNPRLKEKWIEVTVDTQV 407
RSKQYIF+AATLP+NGKKTAG +LK MF DA W+SGN+LH ++PRLK+KW+EVTVD+QV
Sbjct: 350 TRSKQYIFIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKWVEVTVDSQV 409
Query: 408 DALIEAVKERLEFGAETSRTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTL 467
DALIEAVK E RTMVFANTV+AV AV IL+ A I+CY YHK+ L+ERA L
Sbjct: 410 DALIEAVKNNNNTNTE--RTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANIL 467
Query: 468 VNFQEKGGVFVCTDAAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLY 527
+F+E GGVFVCTDAAARG+D+PNVSHVIQADFA+SAVDFLHR+GRTARAGQYG VTSLY
Sbjct: 468 ADFRETGGVFVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLY 527
Query: 528 TESNRDLVDTIRRAAKLGQPV 548
TE+NRDLV+ IR A K+GQPV
Sbjct: 528 TEANRDLVEAIREAVKMGQPV 548
>sp|Q6H601|RH22_ORYSJ DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp.
japonica GN=Os09g0383400 PE=2 SV=2
Length = 577
Score = 574 bits (1480), Expect = e-163, Method: Compositional matrix adjust.
Identities = 288/479 (60%), Positives = 353/479 (73%), Gaps = 12/479 (2%)
Query: 78 FFADDNVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHS 137
FF++++ +W+SLG+SDRL AL +G RPS+VQAA + VL+ DV++AAETGSGKTH
Sbjct: 76 FFSEESTSWESLGVSDRLASALHGAGLARPSLVQAACIPHVLTTNDVIVAAETGSGKTHG 135
Query: 138 YLVPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPL 197
YLVPLIEKLC+ +E+ NS + +LVLCPNV+LCEQVVRMAN+L ++GEPL
Sbjct: 136 YLVPLIEKLCSKSISAEDGNSQDVTSGSPNIALVLCPNVMLCEQVVRMANSLVDESGEPL 195
Query: 198 VRAVAVCGGQGWPIGKPDVIVSTPAALLN---NIDPKRRRRMEFVRGVKYVVFDEADMLL 254
A AVCG +GWP +PD++V+TPAALLN + DP++RRR F+R VK++VFDEADMLL
Sbjct: 196 KSAAAVCGPKGWPTVRPDILVATPAALLNYLFDYDPEKRRRERFLRNVKFIVFDEADMLL 255
Query: 255 CGSFQNQVIRLINMFRFDEKQLSRMNESGVEKPLEMDNSSLTQPDLQDEENLQDEYISDE 314
CGSF+NQVIRLI+M RFDEK LSRM +SG E L N D Q E D DE
Sbjct: 256 CGSFENQVIRLIHMLRFDEKLLSRMEDSGKEISLGDTNEYREDSDSQSAELSAD----DE 311
Query: 315 GNFEGDSDVEGLTEETKSGSIKKKDWRRVRKNYQRSKQYIFVAATLPINGKKTAGAVLKQ 374
N +G + E KKDWRRVRK Y+RSKQY+FVAATLP +GKKTAG VLK+
Sbjct: 312 ENEDGLVQHRPVNVENAHIGAHKKDWRRVRKVYRRSKQYVFVAATLPQSGKKTAGGVLKR 371
Query: 375 MFPDADWISGNYLHFHNPRLKEKWIEVTVDTQVDALIEAVKERLEFGAETS-----RTMV 429
MFP+A W+SG YLH HNPRL+ +WIEVT DTQV AL++AVK L+ + RTMV
Sbjct: 372 MFPNAVWVSGAYLHRHNPRLERRWIEVTADTQVSALLDAVKYGLKNEVHDTKLGPNRTMV 431
Query: 430 FANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEKGGVFVCTDAAARGIDI 489
F NTVDA +V+ IL+ G+ C YH+D SLEERAK L +F+E GGV VCTDAAARG+D+
Sbjct: 432 FTNTVDAANSVSDILQRVGVPCILYHRDSSLEERAKNLQSFRENGGVLVCTDAAARGLDV 491
Query: 490 PNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESNRDLVDTIRRAAKLGQPV 548
PNVSHVIQA+FA AVDFLHRVGRTARAGQ G+VTSLYTE+NRDLV +R+A +L QPV
Sbjct: 492 PNVSHVIQAEFAACAVDFLHRVGRTARAGQSGIVTSLYTEANRDLVRAVRQAEELAQPV 550
>sp|A6QUM7|DBP10_AJECN ATP-dependent RNA helicase DBP10 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=DBP10 PE=3 SV=1
Length = 900
Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 126/468 (26%), Positives = 208/468 (44%), Gaps = 105/468 (22%)
Query: 86 WKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEK 145
++SLGL+ L++A+ GF P+ +Q ++ VL +DVV A TGSGKT ++++P+IEK
Sbjct: 88 FQSLGLNAALLKAITRKGFSVPTPIQRKTIPLVLDDQDVVGMARTGSGKTAAFVIPMIEK 147
Query: 146 LCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCG 205
L S+S K + RA L+L P+ L Q +++ L +++V + G
Sbjct: 148 L--------KSHSAKFGS--RA--LILSPSRELALQTLKVVKELGRGTD---LKSVLLVG 192
Query: 206 GQG------WPIGKPDVIVSTPAALLNNIDPKRRRRMEF---VRGVKYVVFDEADMLLCG 256
G + PD+I++TP L+ ++E + ++YVVFDEAD L
Sbjct: 193 GDSLEEQFEYMASNPDIIIATPGRFLH-------LKVEMSLDLSSIRYVVFDEADRLFEM 245
Query: 257 SFQNQVIRLINMFRFDE----------KQLSRMNESGVEKPL--EMDNSSLTQPDLQDEE 304
F Q+ +++ K L +G+++P+ +D S PD
Sbjct: 246 GFATQLTEILHGLPSSRQTLLFSATLPKSLVEFARAGLQEPILIRLDAESKISPD----- 300
Query: 305 NLQDEYISDEGNFEGDSDVEGLTEETKSGSIKKKDWRRVRKNYQRSKQYIFVAATLPING 364
LQ+ + + + + + + + L E K + + + +R ++ + SK
Sbjct: 301 -LQNAFFTVKSSEKEGALLHVLHEVIKIPTGETEALKRAKEEVKHSK------------- 346
Query: 365 KKTAGAVLKQMFPDADWISGNYLHFHNPRLKEKWIEVTVDTQVDALIEAVKERLEFGAET 424
K K EVT ++ ++ E
Sbjct: 347 ------------------------------KRKRSEVTSNSHKESPTE------------ 364
Query: 425 SRTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEK-GGVFVCTDAA 483
T++F T V +T IL+T+G + L R + NF++ + V TD A
Sbjct: 365 HSTIIFTATKHHVDYLTSILRTSGFAVSYAYGSLDQTARKIEVQNFRDGITHILVVTDVA 424
Query: 484 ARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESN 531
ARGIDIP +S+VI DF + F+HRVGRTARAG+ G SL ES+
Sbjct: 425 ARGIDIPILSNVINYDFPSQPKIFVHRVGRTARAGKTGWSYSLIRESD 472
>sp|A5DU73|PRP28_LODEL Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=PRP28 PE=3 SV=1
Length = 597
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 206/476 (43%), Gaps = 91/476 (19%)
Query: 85 TWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIE 144
+W GL +++ +L++ GF +P+ VQ AS+ L +DVV AETGSGKT ++L+PL+
Sbjct: 186 SWDESGLDPKILASLKSFGFRQPTPVQRASIPISLELRDVVGVAETGSGKTLAFLLPLLH 245
Query: 145 KLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVC 204
L D N +K P A LVL P L Q+ + A G +++
Sbjct: 246 YLSRV--DGNYLNYEKVRNEPLA--LVLAPTRELALQITQEAEKFGKQLG---FNVLSII 298
Query: 205 GGQGWP----------IGKP-DVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADML 253
GG+ + +G+ ++V TP LL++++ R+ + F + Y+V DEAD +
Sbjct: 299 GGRQYQETMDQIDNMIVGRGVHIVVGTPGRLLDSVE---RKILNFSK-CYYLVMDEADRM 354
Query: 254 LCGSFQNQVIRLINMFRFDEKQLSRMNES--GVEKPLEMDNSSLTQPDLQDEENLQDEYI 311
+ F+ + +LIN+ +EK + ++ + K L M ++ P ++
Sbjct: 355 IDMGFEKDLNKLINLLPKNEKLSTTIDGKLFHLTKRLTMMYTATISPPIE---------- 404
Query: 312 SDEGNFEGDSDVEGLTEETKSGSIKKKDWRRVRKNYQRSKQYIFVAATLPINGKKTAGAV 371
++ K+Y YI++ AG
Sbjct: 405 ------------------------------KITKSYLIDPAYIYIGG---------AGEA 425
Query: 372 LKQMFPDADWISGNYLHFHNPRLKEKWIEVTVDTQVDALIEAVKERLEFGAETSRTMVFA 431
L + D++S + E +++ +++ K R + ++FA
Sbjct: 426 LDNIDQHFDYLS-------------TYAESARLSKLIKVVQGHKRR----NRNALVIIFA 468
Query: 432 NTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQ-EKGGVFVCTDAAARGIDIP 490
N ++ L+ + H S E R + L +F+ + + V TD AARGID+P
Sbjct: 469 NFKHVCDVLSLELEQNNLLNVVIHGSKSQEAREEALEDFRTHQAPILVATDVAARGIDVP 528
Query: 491 NVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESNRDLVDTIRRAAKLGQ 546
NVS VI + +++HR+GRT RAG G + +++ + +++ K G+
Sbjct: 529 NVSLVINYQMSKKFDEYIHRIGRTGRAGNLGESYTFLDDADAETFMPLKKFLKSGR 584
>sp|A6RSH5|DBP7_BOTFB ATP-dependent RNA helicase dbp7 OS=Botryotinia fuckeliana (strain
B05.10) GN=dbp7 PE=3 SV=1
Length = 877
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 209/483 (43%), Gaps = 83/483 (17%)
Query: 75 SDTFFADDNVTWKSLGLSDRLIRALENS-GFGRPSIVQAASVGPVLSG-KDVVIAAETGS 132
S+ ++ T+ +LGLS RL L P+ +Q ASV ++S D I AETGS
Sbjct: 246 SNAPLTEEMATFTNLGLSRRLAAHLSTKLDMKAPTAIQKASVQQLVSDDSDAFIQAETGS 305
Query: 133 GKTHSYLVPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSAD 192
GKT +YL+P++E++ L SEN + A ++L P LC+Q+ + +
Sbjct: 306 GKTLAYLLPIVERI---LALSENGVQIHRDSGLFA--IILSPTRELCKQIAAVLEKVL-- 358
Query: 193 NGEPLVRAVAVCGGQGWPIGKP------DVIVSTPAALLNNIDPKRRRRMEFVRGVKYVV 246
P + V GG+ K +++V+TP L +++D + V V+++V
Sbjct: 359 RCAPWIVGTTVNGGESKQSEKARLRKGVNILVATPGRLADHLD---NTEVLNVATVRWLV 415
Query: 247 FDEADMLLCGSFQNQVIRLINMFRFDEKQLSRMNESGVEKP-----------LEMDNSSL 295
DE D L+ F+ ++ ++ + + +++ N P ++M+ L
Sbjct: 416 LDEGDRLMELGFEEEIKGIVE--KIGRRSVAKANSDMGSLPKRRVTILCSATMKMNVQRL 473
Query: 296 TQPDLQDEENLQDEYISDEGNFEGDSDVEGLTEETKSGSIKKKDWRRVRKNYQRSKQYIF 355
+ L+D ++Q +D E G+ + K+ S Q + Y
Sbjct: 474 GEISLKDAVHIQ----ADPSEQEKQDKENGVEAQDKAFSAP----------TQLKQSYAI 519
Query: 356 VAATLPINGKKTAGAVLKQMFPDADWI--------SGNYLHFHNP---RLKEKWIEVTVD 404
V A L + T A+LK+ F + + + FH R E EV +
Sbjct: 520 VPAKLRL---VTLTALLKRAFARKGSVMKAIVFISCADSVDFHFSLFSRTPEASAEVVDE 576
Query: 405 TQVD--AL--IEAVKERLEFGAETSRTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSL 460
+VD AL E VKE + G S N + V + H L+
Sbjct: 577 EKVDLPALPKSELVKETIAHGTTIS------NNSNPVI------------LHKLHGSLAQ 618
Query: 461 EERAKTLVNFQEKGG--VFVCTDAAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAG 518
R TL F E V +CTD A+RG+D+PNV VI+ D SA D LHRVGRTARAG
Sbjct: 619 NIRTATLKAFSESADPCVMICTDVASRGLDLPNVDFVIEYDPPFSAEDHLHRVGRTARAG 678
Query: 519 QYG 521
+ G
Sbjct: 679 REG 681
>sp|A7F8V8|DBP7_SCLS1 ATP-dependent RNA helicase dbp7 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=dbp7 PE=3 SV=1
Length = 877
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 209/483 (43%), Gaps = 83/483 (17%)
Query: 75 SDTFFADDNVTWKSLGLSDRLIRALENS-GFGRPSIVQAASVGPVLSG-KDVVIAAETGS 132
S+ ++ T+ +LGLS RL L P+ +Q ASV ++S D I AETGS
Sbjct: 246 SNAPLTEEMATFTNLGLSRRLAAHLSTKLDMKAPTAIQKASVTQLISDDSDAFIQAETGS 305
Query: 133 GKTHSYLVPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSAD 192
GKT +YL+P++E++ AL D N + +++L P LC+Q+ + +
Sbjct: 306 GKTLAYLLPIVERIL-ALSD----NGIQIHRDSGLFAIILSPTRELCKQIAAVLEKVL-- 358
Query: 193 NGEPLVRAVAVCGGQGWPIGKP------DVIVSTPAALLNNIDPKRRRRMEFVRGVKYVV 246
P + V GG+ K +++V+TP L +++D + V V+++V
Sbjct: 359 RCAPWIVGTTVNGGESKQSEKARLRKGVNILVATPGRLADHLD---NTEVLNVATVRWLV 415
Query: 247 FDEADMLLCGSFQNQVIRLINMFRFDEKQLSRMNESGVEKP-----------LEMDNSSL 295
DE D L+ F+ ++ ++ + + ++ + + P ++M+ L
Sbjct: 416 LDEGDRLMELGFEEEIKGIVE--KIGRRSVASGSSEMMSLPKRRVTILCSATMKMNVQRL 473
Query: 296 TQPDLQDEENLQDEYISDEGNFEGDSDVEGLTEETKSGSIKKKDWRRVRKNYQRSKQYIF 355
+ L+D ++Q +D E G+ + K+ S Q + Y
Sbjct: 474 GEISLKDAVHIQ----ADPSEQEKQDKANGIEADDKAFSAP----------TQLKQSYAI 519
Query: 356 VAATLPINGKKTAGAVLKQMFPDADWI--------SGNYLHFHNP---RLKEKWIEVTVD 404
V A L + T A+LK+ F + + + FH R EK E + +
Sbjct: 520 VPAKLRL---VTLTALLKRAFARKGSVMKAIVFMSCADSVDFHFSLFSRSAEKSAEASEE 576
Query: 405 TQVDALI----EAVKERLEFGAETSRTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSL 460
+VD E +KE + GA +N + V + H L+
Sbjct: 577 GKVDPPTLPKSELIKETITHGA------TISNNSNPVI------------LHKLHGSLAQ 618
Query: 461 EERAKTLVNFQEKGG--VFVCTDAAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAG 518
R TL + E V +CTD A+RG+D+PNV VI+ D SA D LHRVGRTARAG
Sbjct: 619 NIRTATLKAYSESADPCVLICTDVASRGLDLPNVDFVIEYDPPFSAEDHLHRVGRTARAG 678
Query: 519 QYG 521
+ G
Sbjct: 679 REG 681
>sp|P20447|DBP3_YEAST ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP3 PE=1 SV=2
Length = 523
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 175/450 (38%), Gaps = 122/450 (27%)
Query: 100 ENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEKLCTALGDSENSNSD 159
E S F +P+ +QA + +LSGKDVV AETGSGKT ++ VP I L + D +
Sbjct: 128 EISKFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHL---MNDQKKRG-- 182
Query: 160 KEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCGG-----QGWPIGKP 214
LV+ P L Q+ L+ G ++ V GG Q + K
Sbjct: 183 -------IQVLVISPTRELASQIYDNLIVLTDKVG---MQCCCVYGGVPKDEQRIQLKKS 232
Query: 215 DVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLLCGSFQNQVIRLINMFRFDEK 274
V+V+TP LL D+L GS + +N DE
Sbjct: 233 QVVVATPGRLL-------------------------DLLQEGSVD---LSQVNYLVLDEA 264
Query: 275 QLSRMNESGVEKPLEMDNSSLTQPDLQDEENLQDEYISDEGNFEGDSDVEGLTEETKSGS 334
RM E G E+ D++ + ET +
Sbjct: 265 --DRMLEKGFEE-----------------------------------DIKNIIRETDASK 287
Query: 335 IKKKDWRRVRKNYQRSKQYIFVAATLPINGKKTAGAVL----KQMFPDADWISGN----- 385
+Q + AT P ++ A + K + D ++ N
Sbjct: 288 ----------------RQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQ 331
Query: 386 YLHFHNPRLKEKWIEVTVDTQVDALIEAVKERLEFGAETSRTMVFANTVDAVYAVTKILK 445
+ +PR KE+ L+E +K+ + + ++FA V + LK
Sbjct: 332 IVEVVDPRGKER-----------KLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLK 380
Query: 446 TAGIECYCYHKDLSLEERAKTLVNFQE-KGGVFVCTDAAARGIDIPNVSHVIQADFATSA 504
G H DLS ++R + L F+ K + + TD AARG+DIPNV VI F +
Sbjct: 381 YNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTV 440
Query: 505 VDFLHRVGRTARAGQYGLVTSLYTESNRDL 534
D++HR+GRT RAGQ G +L+TE + L
Sbjct: 441 EDYVHRIGRTGRAGQTGTAHTLFTEQEKHL 470
>sp|A6ZUA1|DBP3_YEAS7 ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP3 PE=3 SV=1
Length = 523
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 175/450 (38%), Gaps = 122/450 (27%)
Query: 100 ENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEKLCTALGDSENSNSD 159
E S F +P+ +QA + +LSGKDVV AETGSGKT ++ VP I L + D +
Sbjct: 128 EISKFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHL---MNDQKKRG-- 182
Query: 160 KEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCGG-----QGWPIGKP 214
LV+ P L Q+ L+ G ++ V GG Q + K
Sbjct: 183 -------IQVLVISPTRELASQIYDNLIVLTDKVG---MQCCCVYGGVPKDEQRIQLKKS 232
Query: 215 DVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLLCGSFQNQVIRLINMFRFDEK 274
V+V+TP LL D+L GS + +N DE
Sbjct: 233 QVVVATPGRLL-------------------------DLLQEGSVD---LSQVNYLVLDEA 264
Query: 275 QLSRMNESGVEKPLEMDNSSLTQPDLQDEENLQDEYISDEGNFEGDSDVEGLTEETKSGS 334
RM E G E+ D++ + ET +
Sbjct: 265 --DRMLEKGFEE-----------------------------------DIKNIIRETDASK 287
Query: 335 IKKKDWRRVRKNYQRSKQYIFVAATLPINGKKTAGAVL----KQMFPDADWISGN----- 385
+Q + AT P ++ A + K + D ++ N
Sbjct: 288 ----------------RQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQ 331
Query: 386 YLHFHNPRLKEKWIEVTVDTQVDALIEAVKERLEFGAETSRTMVFANTVDAVYAVTKILK 445
+ +PR KE+ L+E +K+ + + ++FA V + LK
Sbjct: 332 IVEVVDPRGKER-----------KLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLK 380
Query: 446 TAGIECYCYHKDLSLEERAKTLVNFQE-KGGVFVCTDAAARGIDIPNVSHVIQADFATSA 504
G H DLS ++R + L F+ K + + TD AARG+DIPNV VI F +
Sbjct: 381 YNGYNIAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTV 440
Query: 505 VDFLHRVGRTARAGQYGLVTSLYTESNRDL 534
D++HR+GRT RAGQ G +L+TE + L
Sbjct: 441 EDYVHRIGRTGRAGQTGTAHTLFTEQEKHL 470
>sp|Q0CF43|DBP7_ASPTN ATP-dependent RNA helicase dbp7 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=dbp7 PE=3 SV=2
Length = 769
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 210/474 (44%), Gaps = 76/474 (16%)
Query: 85 TWKSLGLSDRLI-RALENSGFGRPSIVQAASVGPVLSGK-DVVIAAETGSGKTHSYLVPL 142
T+ +LGLS L L P+ +Q AS+ +L + D I AETGSGKT +YL+PL
Sbjct: 143 TFTNLGLSPTLAAHLLTKLELKAPTAIQKASISQLLKEESDAFIQAETGSGKTLAYLLPL 202
Query: 143 IEKLCTALGDSEN-------SNSDKEPTPPRAPSL---VLCPNVVLCEQVVRMANALSAD 192
++++ AL N ++++ +P R L VL P LC+Q+ + L
Sbjct: 203 VQRIM-ALSHPTNRTDATSTTDAEGQPVVHRDSGLFAIVLAPTRELCKQISVVLEGLL-- 259
Query: 193 NGEPLVRAVAVCGGQGWPIGKP------DVIVSTPAALLNNIDPKRRRRMEFVRGVKYVV 246
+ A V GG+ K +++V+TP L ++++ + V V+++V
Sbjct: 260 RCAHWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLE---NTQALDVSNVRWLV 316
Query: 247 FDEADMLLCGSFQNQVIRLINMFRFDEKQL-SRMNESGVEKP-------LEMDNSSLTQP 298
DE D L+ F+ ++ +I + D +Q SR+ ++ L+M+ L +
Sbjct: 317 LDEGDRLMELGFEQELQGIIK--KLDARQRPSRIPGVPTKRTTILCSATLKMNVQKLGEM 374
Query: 299 DLQDEENLQDEYISDEGNFEGDSDVEGLTEETKSGSIKKKDWRRVRKNYQRSKQYIFVAA 358
L+D +++ + ++G+ + +D E + T +K+ Y VAA
Sbjct: 375 SLKDAIHIKADPADEDGDAKPKNDDE--SAFTVPAQLKQ--------------SYAIVAA 418
Query: 359 TLPINGKKTAGAVLKQMFPDADWISGNYLHFHNPRLKEKWIEVTVDTQVDALIEAVKERL 418
L + T A LK+ F + + + V+ VD E +L
Sbjct: 419 KLRL---VTLTAFLKRTF------------MRKGSVMKAIVFVSCADSVDFHFEVFTRKL 463
Query: 419 EFGAETSRTMVFANTVD--AVYAVTKILKTAG-------IECYCYHKDLSLEERAKTLVN 469
+ E + ++T + A + I + + + H L R TL +
Sbjct: 464 QDSDENAEDSDASDTKEKPAAFTHNTIARATAFSNPSNPVTLHRLHGSLPQHVRTSTLAS 523
Query: 470 F--QEKGGVFVCTDAAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYG 521
F + V VCTD A+RG+D+PNV VI+ D A SA D LHR+GRTAR G+ G
Sbjct: 524 FARNKDASVLVCTDVASRGLDLPNVDLVIEYDPAFSAEDHLHRIGRTARLGRDG 577
>sp|Q54TD7|DDX24_DICDI ATP-dependent RNA helicase ddx24 OS=Dictyostelium discoideum
GN=ddx24 PE=3 SV=1
Length = 940
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 226/507 (44%), Gaps = 78/507 (15%)
Query: 82 DNVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVL--SGKDVVIAAETGSGKTHSYL 139
D W S L +++ L + GF +P+ +Q+ SV PV SG DV+ AA+TGSGKT ++
Sbjct: 292 DMSEWNSYNLDPLILKGLRSLGFSKPTEIQS-SVIPVAVSSGYDVIGAAQTGSGKTLAFG 350
Query: 140 VPLIEKLCTAL---GDSENSNSDKEPTPPRAP------------------------SLVL 172
+P+++++ L G + + ++K+ SLV+
Sbjct: 351 IPMVQRILQHLRKHGQNVENKANKQQNDNDDENEDVEEEEEEEEEEGRSKEYRKLFSLVI 410
Query: 173 CPNVVLCEQVVRMANALSADNGEPLVRAVAVCGG------QGWPIGKPDVIVSTPAALLN 226
CP L QV ++ + ++ +++ GG Q +P+++V+TP L
Sbjct: 411 CPTRELAIQVTNHIKSIISHTN---LKVISIVGGMASQRQQRVLSKRPEIVVATPGRLWE 467
Query: 227 NIDPKRRRRMEFVRGVKYVVFDEADMLLCGSFQNQVIRLINMFRFDEKQLSRMNESGVEK 286
I G +++V E + LLC ++ R++ F E + S + + +
Sbjct: 468 LI----------TEGHQHLV--ELESLLCLGI-DEADRMVEQGHFAELE-SILKTLPIHR 513
Query: 287 PLEMDNSSLTQPDLQDEENLQD--EYISDEGNF-EGDSD-VEGLTEETKSGSIKKKDWRR 342
L + + +++ N + + ++D+G +GD D ++ + + +++++
Sbjct: 514 TAMSKKERLKKKETEEKRNKRRKVDKLNDKGEMIKGDQDDMDDQIPDEEMEELEQEEQNH 573
Query: 343 VRKNYQRSKQYIFVAA--TLPINGKKTA-GAVLKQMFPDADWISGNYLHFHNPRLKEKWI 399
+ ++R + ++F A +P +G T+ +++ P + I + F K I
Sbjct: 574 LTTTHKR-QTFVFSATLVNIPGDGAPTSQKKKYRKLTPIENLIEK--VRFQRDY---KLI 627
Query: 400 EVT---------VDTQVDALIEAVKERLEFGAET--SRTMVFANTVDAVYAVTKILKTAG 448
+VT ++T++ +E L + E RT+VF N++D + I
Sbjct: 628 DVTQKRLTAKNLLETKIFCNLEEKDMYLYYFVERYPGRTLVFVNSIDCARRLIPIFNILE 687
Query: 449 IECYCYHKDLSLEERAKTLVNFQEKGGV-FVCTDAAARGIDIPNVSHVIQADFATSAVDF 507
+ + H + ++R K L F+ V + TD AARG+DIP V HVI + +
Sbjct: 688 VPVFALHAQMQQKQRLKNLDRFRTLDNVVLIATDVAARGLDIPLVQHVIHYQVPRTTQLY 747
Query: 508 LHRVGRTARAGQYGLVTSLYTESNRDL 534
+HR GRTAR+ Q G+ L T R L
Sbjct: 748 IHRSGRTARSDQDGISVVLVTPKERPL 774
>sp|Q2UE66|DBP7_ASPOR ATP-dependent RNA helicase dbp7 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dbp7 PE=3 SV=1
Length = 760
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 210/469 (44%), Gaps = 67/469 (14%)
Query: 85 TWKSLGLSDRLI-RALENSGFGRPSIVQAASVGPVLS-GKDVVIAAETGSGKTHSYLVPL 142
T+ +LGLS L L P+ +Q AS+ +L D I AETGSGKT +YL+PL
Sbjct: 138 TFTNLGLSPSLAAHLLTKLELKAPTGIQKASMSQLLKEDSDAFIQAETGSGKTLAYLLPL 197
Query: 143 IEKLCTALGDSEN--SNSDKEPTPPRAPSL---VLCPNVVLCEQV-VRMANALSADNGEP 196
++++ T + + +N +NS EP R L VL P LC+Q+ V + + L +
Sbjct: 198 VQRIMT-VSNPKNMSTNSKGEPIVHRDSGLFAIVLAPTRELCKQISVVLESLLRCAH--- 253
Query: 197 LVRAVAVCGGQGWPIGKP------DVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEA 250
+ A V GG+ K +++V+TP L ++++ + V V+++V DE
Sbjct: 254 WIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLE---NTQALDVSNVRWLVLDEG 310
Query: 251 DMLLCGSFQNQVIRLINMFRFDEKQL-SRMNESGVEKPLEMDNSSLTQPDLQDEENLQDE 309
D L+ F+ ++ +I + D +Q SR+ ++ + +++L + + L +
Sbjct: 311 DRLMELGFEKELQGIIQ--KLDARQRPSRIPGIPTKRTTILCSATLKM----NVQKLGEI 364
Query: 310 YISDEGNFEGDSDVEGLTEETKSGSIKKKDWRRVRKNYQRSKQYIFVAATLPINGKKTAG 369
+ D + + D E G K+KD R Q + Y VAA L + T
Sbjct: 365 SLKDAVHIKADPADE-------DGETKRKDDDGFRVPAQLKQSYAIVAAKLRL---VTLT 414
Query: 370 AVLKQMFPDADWISGNYLHFHNPRLKEKWIEVTVDTQVDALIEAVKERLEF--------- 420
A LK+ F + + + V+ VD E R ++
Sbjct: 415 AYLKRTF------------MRKGSVMKAIVFVSCADSVDFHFEVFSRRKQYRDESEDEDE 462
Query: 421 -----GAETSRTMVFANTVDAVY-AVTKILKTAGIECYCYHKDLSLEERAKTLVNF--QE 472
+ S+T A+ + AV + ++ + H L R TL F +
Sbjct: 463 EKEDDDEDNSKTKSEASPHGTIAPAVAFSNPSNPVKLHKLHGSLPQHVRTATLNAFSRER 522
Query: 473 KGGVFVCTDAAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYG 521
+ V VCTD A+RG+D+PNV VI+ D A SA D HR+GRTAR G+ G
Sbjct: 523 EPSVLVCTDVASRGLDLPNVDLVIEYDPAFSADDHTHRIGRTARLGRDG 571
>sp|Q5BGX6|DBP7_EMENI ATP-dependent RNA helicase dbp7 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=dbp7
PE=3 SV=1
Length = 778
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 215/470 (45%), Gaps = 66/470 (14%)
Query: 85 TWKSLGLSDRLI-RALENSGFGRPSIVQAASVGPVLSGK-DVVIAAETGSGKTHSYLVPL 142
T+ +LGLS L L P+ +Q AS+ +L + D I AETGSGKT +YL+PL
Sbjct: 152 TFTNLGLSPTLAAHLLTKLELKAPTAIQKASITQLLKEETDAFIQAETGSGKTLAYLLPL 211
Query: 143 IEKLCTALGDSENSNSDKEPTPPRAPS----LVLCPNVVLCEQV-VRMANALSADNGEPL 197
++++ AL ++N K T S ++L P LC+Q+ V + L +
Sbjct: 212 VQRIM-ALSRAKNEGDAKGDTSVHRDSGLFAIILAPTRELCKQISVVLEGLLRCAH---W 267
Query: 198 VRAVAVCGGQGWPIGKP------DVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEAD 251
+ A V GG+ K +++V+TP L ++++ + V V+++V DE D
Sbjct: 268 IVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLE---NTQALDVSNVRWLVLDEGD 324
Query: 252 MLLCGSFQNQVIRLINMFRFDEKQL-SRMNESGVEKP-------LEMDNSSLTQPDLQDE 303
L+ F+ ++ +I+ + D +Q SR+ ++ L+M+ L + L+D
Sbjct: 325 RLMELGFEKELQEIIS--KLDARQRPSRIPGVPAKRATILCSATLKMNVQKLGEISLKDA 382
Query: 304 ENLQDEYISDEGNFEGDSDVEGLTEETKSGSIKKKDWRRVRKNYQRSKQYIFVAA----- 358
+++ +D + +G+ E KD R Q + Y VAA
Sbjct: 383 VHIK----ADPADEDGEKTAE------------DKDGDAFRVPAQLKQSYAIVAAKLRLV 426
Query: 359 TLPINGKKT---AGAVLKQMFPDADWIS-GNYLHFHNPRLKEKWIEVTVDTQVDALIEAV 414
TL K+T G+V+K + ++S + ++FH K E D ++
Sbjct: 427 TLTAFMKRTFMRKGSVMKAII----FVSCADSVNFHFEVFTRKLAEQLEGDNPDEGSDS- 481
Query: 415 KERLEFGAETSRTMVFANTVDAVYAVTKILKTA-GIECYCYHKDLSLEERAKTLVNFQEK 473
E + + T A+T V T ++ + Y H L R TL +F +
Sbjct: 482 -EHEKEKEKEKPTP--ASTHGTVAPATAFSNSSNAVTMYKLHGSLPQHVRTSTLSSFAKN 538
Query: 474 --GGVFVCTDAAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYG 521
V +CTD A+RG+D+PNV V++ D A SA + LHR+GRTAR G+ G
Sbjct: 539 RDPSVLICTDVASRGLDLPNVDLVVEYDPAFSADEHLHRIGRTARLGRDG 588
>sp|Q54VF1|DDX56_DICDI Probable ATP-dependent RNA helicase ddx56 OS=Dictyostelium
discoideum GN=ddx56 PE=3 SV=1
Length = 685
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 104/195 (53%), Gaps = 21/195 (10%)
Query: 74 SSDTFFADDNVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSG 133
SSD D T++S+GL +R++RAL+ GF PS+VQ+ S+ L GKD++ A TGSG
Sbjct: 15 SSD--LIDLECTFESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKDILAKARTGSG 72
Query: 134 KTHSYLVPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADN 193
KT +Y +P+I+K+ A E SN ++VL P LCEQV N +S
Sbjct: 73 KTAAYSIPIIQKVLMA---KEKSN------IKGVKAVVLVPTRELCEQVKNHFNQVSY-Y 122
Query: 194 GEPLVRAVAVCGGQGWPIGK------PDVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVF 247
+ LV V + + K PDVIVSTP L+ +++ K ++ + +V
Sbjct: 123 CQQLVSVVQLGNDKTLDEQKGLLRDIPDVIVSTPTRLVQHLENK---TIQLQSTLDILVI 179
Query: 248 DEADMLLCGSFQNQV 262
DEAD++L QN +
Sbjct: 180 DEADLVLNYGHQNDI 194
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 482 AAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESNRDLVDTIRRA 541
ARGID NV V+ DF + +++HR+GRTAR G+ S T N +L+ + +
Sbjct: 426 GVARGIDFRNVDIVVNFDFPRTIKNYIHRIGRTARGTNKGIALSFVTYHNEELLKKVSKT 485
>sp|Q56X76|RH39_ARATH DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana
GN=RH39 PE=2 SV=2
Length = 621
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 109/196 (55%), Gaps = 12/196 (6%)
Query: 352 QYIFVAATLPINGKKTAGAVLKQMFPDADWISGNYLHFHNPRLKEKWIEVTV-DTQVDAL 410
Q + V AT+ + +K ++ + F + + + LH + +I+++ + +++AL
Sbjct: 304 QTVLVTATMTMAVQK----LVDEEFQGIEHLRTSTLHKKIANARHDFIKLSGGEDKLEAL 359
Query: 411 IEAVKERLEFGAETSRTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNF 470
++ ++ L A+ S+ MVF NT+++ AV L I YH ++ E+R + L F
Sbjct: 360 LQVLEPSL---AKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKF 416
Query: 471 QEKGG---VFVCTDAAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLY 527
+++ G VCTD AARG+D+ +V HV+ DF +++D+LHR GRTAR G G VTSL
Sbjct: 417 KDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLHRTGRTARMGAKGKVTSLV 475
Query: 528 TESNRDLVDTIRRAAK 543
+ ++ L I A +
Sbjct: 476 SRKDQMLAARIEEAMR 491
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 113/229 (49%), Gaps = 29/229 (12%)
Query: 86 WKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEK 145
++ LGLS+ ++ AL+ P+ +Q + V+ K VV+ + TGSGKT +YL+P+++
Sbjct: 114 FQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQ- 172
Query: 146 LCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCG 205
L + +N K+ P R ++VLCP L EQV R+A ++S R++ V G
Sbjct: 173 ----LMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISH---HARFRSILVSG 225
Query: 206 GQGWPIGKP---------DVIVSTPAALLNNIDPKRRRRMEFVRG-VKYVVFDEADMLLC 255
G +P D++V TP +L +I+ V G + Y+V DEAD +
Sbjct: 226 GSRI---RPQEDSLNNAIDMVVGTPGRILQHIE-----EGNMVYGDIAYLVLDEADTMFD 277
Query: 256 GSFQNQVIRLINMFRFDEKQLSRMNESGVEKPLEMDNSSLTQPDLQDEE 304
F ++ + + +++ L + N+ G + L ++ L DEE
Sbjct: 278 RGFGPEIRKFLAP--LNQRAL-KTNDQGFQTVLVTATMTMAVQKLVDEE 323
>sp|Q09719|DBP10_SCHPO ATP-dependent RNA helicase dbp10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp10 PE=1 SV=1
Length = 848
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 103/190 (54%), Gaps = 25/190 (13%)
Query: 86 WKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEK 145
++S+GL+ L+RA+ GF P+ +Q ++ +L G+DVV A TGSGKT ++++P+IE
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 146 LCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCG 205
L + L NSN+ +L+L PN L Q V++ S +R+VA+ G
Sbjct: 131 LKSTLA---NSNTR---------ALILSPNRELALQTVKVVKDFSKGTD---LRSVAIVG 175
Query: 206 GQGWP------IGKPDVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLLCGSFQ 259
G GKPD++V+TP L+ K ++E + ++YVVFDEAD L F
Sbjct: 176 GVSLEEQFSLLSGKPDIVVATPGRFLH---LKVEMKLE-LSSIEYVVFDEADRLFEMGFA 231
Query: 260 NQVIRLINMF 269
Q+ +++
Sbjct: 232 AQLTEILHAL 241
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 427 TMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQ-EKGGVFVCTDAAAR 485
T+VF T V V+++L AG + L E R + NF+ K + V TD A+R
Sbjct: 349 TLVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASR 408
Query: 486 GIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSL 526
GIDIP +++VI DF F+HRVGRTARAG+ G SL
Sbjct: 409 GIDIPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAYSL 449
>sp|Q5VRY0|RH39_ORYSJ DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp.
japonica GN=Os01g0184500 PE=2 SV=1
Length = 625
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 84/143 (58%), Gaps = 7/143 (4%)
Query: 404 DTQVDALIEAVKERLEFGAETSRTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEER 463
+ +++AL++ ++ L A+ ++ MVF NT+++ AV L I YH ++ EER
Sbjct: 351 ENKLEALLQVLEPSL---AKGNKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEER 407
Query: 464 AKTLVNFQEKGG---VFVCTDAAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQY 520
+ L F+ + G VCTD AARG+D+ +V HVI DF ++++D+LHR GRTAR G
Sbjct: 408 VENLNKFRNEEGDCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSIDYLHRTGRTARMGAK 466
Query: 521 GLVTSLYTESNRDLVDTIRRAAK 543
G VTSL + + L I A K
Sbjct: 467 GKVTSLVAKKDVTLATRIEEAMK 489
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 95/181 (52%), Gaps = 20/181 (11%)
Query: 85 TWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIE 144
+++ LGL + ++ AL G +P+ +Q V VL+G VV+ + TGSGKT +YL+PL++
Sbjct: 111 SFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQ 170
Query: 145 KLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVC 204
L D +P PRA +VLCP L EQV R+A ++S R+ V
Sbjct: 171 LLRR---DEAMLGMSMKPRRPRA--VVLCPTRELTEQVFRVAKSISH---HARFRSTMVS 222
Query: 205 GG-----QGWPIGKP-DVIVSTPAALLNNIDPKRRRRMEFVRG-VKYVVFDEADMLLCGS 257
GG Q + P D++V TP +L++I + V G +KY+V DEAD +
Sbjct: 223 GGSRIRPQEDSLNMPVDMVVGTPGRILDHI-----KDGNMVYGDIKYLVLDEADTMFDQG 277
Query: 258 F 258
F
Sbjct: 278 F 278
>sp|Q9H0S4|DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47 OS=Homo sapiens GN=DDX47
PE=1 SV=1
Length = 455
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 122/247 (49%), Gaps = 40/247 (16%)
Query: 81 DDNVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLV 140
++ T+K LG++D L A + G+ +P+ +Q ++ L G+D++ AETGSGKT ++ +
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 141 PLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRA 200
P++ L TP R +LVL P L Q+ AL + G V++
Sbjct: 81 PILNALLE--------------TPQRLFALVLTPTRELAFQISEQFEALGSSIG---VQS 123
Query: 201 VAVCGG-----QGWPIG-KPDVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLL 254
+ GG Q + KP +I++TP L+++++ + + R +KY+V DEAD +L
Sbjct: 124 AVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNL---RALKYLVMDEADRIL 180
Query: 255 CGSFQNQVIRLINMFRFDE----------KQLSRMNESGVEKPLEMDNSSLTQPDLQDEE 304
F+ +V +++ + D K++ ++ + ++ P++ SS Q E
Sbjct: 181 NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSS----KYQTVE 236
Query: 305 NLQDEYI 311
LQ YI
Sbjct: 237 KLQQYYI 243
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 428 MVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEKG-GVFVCTDAAARG 486
M+F +T + +L+ G H +S +R +L F+ K + + TD A+RG
Sbjct: 267 MIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRG 326
Query: 487 IDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESNRDLVDTI 538
+DIP+V V+ D T + D++HRVGRTARAG+ G + T+ + +L I
Sbjct: 327 LDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRI 378
>sp|Q1EB38|DBP10_COCIM ATP-dependent RNA helicase DBP10 OS=Coccidioides immitis (strain
RS) GN=DBP10 PE=3 SV=1
Length = 927
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 116/239 (48%), Gaps = 47/239 (19%)
Query: 86 WKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEK 145
++++GL+ L++A+ GF P+ +Q ++ VL +DVV A TGSGKT ++++P+IEK
Sbjct: 83 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPLVLDDQDVVGMARTGSGKTAAFVIPMIEK 142
Query: 146 LCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCG 205
L + T + L+L P+ L Q +++ L G L + V + G
Sbjct: 143 LKS------------HSTKVGSRGLILSPSRELALQTLKVVKELG--RGTDL-KCVLLVG 187
Query: 206 GQ------GWPIGKPDVIVSTPAALLN-----NIDPKRRRRMEFVRGVKYVVFDEADMLL 254
G G+ G PD+I++TP L+ N+D + +KYVVFDEAD L
Sbjct: 188 GDSLEEQFGYMAGNPDIIIATPGRFLHLKVEMNLD---------LSSIKYVVFDEADRLF 238
Query: 255 CGSFQNQVIRLIN---------MFRFD-EKQLSRMNESGVEKP--LEMDNSSLTQPDLQ 301
F Q+ +++ +F K L +G+++P + +D S PDLQ
Sbjct: 239 EMGFAAQLTEILHGLPQSRQTLLFSATLPKSLVEFARAGLQEPTLVRLDTESKISPDLQ 297
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 427 TMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEK-GGVFVCTDAAAR 485
T++F T V + +L+ +G + L R + NF+ + V TD AAR
Sbjct: 365 TIIFVATKHHVDYIASLLRESGFAVSYAYGSLDQTARKIQVSNFRTGISNILVVTDVAAR 424
Query: 486 GIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESN 531
GIDIP + +VI DF + A F+HRVGRTARAG+ G SL +++
Sbjct: 425 GIDIPILENVINYDFPSQAKIFVHRVGRTARAGRKGWSYSLVRDAD 470
>sp|Q9CWX9|DDX47_MOUSE Probable ATP-dependent RNA helicase DDX47 OS=Mus musculus GN=Ddx47
PE=2 SV=2
Length = 455
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 121/247 (48%), Gaps = 40/247 (16%)
Query: 81 DDNVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLV 140
++ T+K LG++D L A + G+ +P+ +Q ++ L G+D++ AETGSGKT ++ +
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 141 PLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRA 200
P++ L TP R +LVL P L Q+ AL + G V+
Sbjct: 81 PILNALL--------------ETPQRLFALVLTPTRELAFQISEQFEALGSSIG---VQC 123
Query: 201 VAVCGG-----QGWPIG-KPDVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLL 254
+ GG Q + KP ++++TP L+++++ + + R +KY+V DEAD +L
Sbjct: 124 AVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNL---RALKYLVMDEADRIL 180
Query: 255 CGSFQNQVIRLINMFRFDE----------KQLSRMNESGVEKPLEMDNSSLTQPDLQDEE 304
F+ +V +++ + D K++ ++ + ++ P++ SS Q E
Sbjct: 181 NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSS----KYQTVE 236
Query: 305 NLQDEYI 311
LQ Y+
Sbjct: 237 KLQQYYL 243
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 428 MVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEKG-GVFVCTDAAARG 486
M+F +T + +L+ G H +S +R +L F+ K + + TD A+RG
Sbjct: 267 MIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRG 326
Query: 487 IDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESNRDLVDTI 538
+DIP+V V+ D T + D++HRVGRTARAG+ G + T+ + +L I
Sbjct: 327 LDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRI 378
>sp|Q2UHC1|DBP10_ASPOR ATP-dependent RNA helicase dbp10 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dbp10 PE=3 SV=1
Length = 929
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 47/240 (19%)
Query: 86 WKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEK 145
++++GL+ L++A+ GF P+ +Q ++ ++ G+DVV A TGSGKT ++++P+IEK
Sbjct: 91 FQAMGLNAHLLKAITRKGFSVPTPIQRKTIPVIMDGQDVVGMARTGSGKTAAFVIPMIEK 150
Query: 146 LCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCG 205
L + T A L+L P+ L Q +++ L +++V + G
Sbjct: 151 LKS------------HSTKVGARGLILSPSRELALQTLKVVKELGKGTD---LKSVLLVG 195
Query: 206 GQGWP------IGKPDVIVSTPAALLN-----NIDPKRRRRMEFVRGVKYVVFDEADMLL 254
G G PD++++TP L+ N+D + ++YVVFDEAD L
Sbjct: 196 GDSLEEQFSLMAGNPDIVIATPGRFLHLKVEMNLD---------LSSIRYVVFDEADRLF 246
Query: 255 CGSFQNQVIRLINMFRFDE----------KQLSRMNESGVEKP--LEMDNSSLTQPDLQD 302
F +Q+ ++ + K L +G+++P + +D S PDL++
Sbjct: 247 EMGFADQLTEILYGLPANRQTLLFSATLPKSLVEFARAGLQEPTLIRLDTESKISPDLEN 306
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 427 TMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEK-GGVFVCTDAAAR 485
T+VFA T V + +L+ AG + L R + NF+ + V TD AAR
Sbjct: 375 TIVFAATKHHVDYLYSLLREAGFAVSYAYGSLDQTARKIQVQNFRAGLSNILVVTDVAAR 434
Query: 486 GIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESN 531
GIDIP +++VI DF + F+HRVGRTARAG+ G SL +++
Sbjct: 435 GIDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLVRDAD 480
>sp|Q9SW44|RH16_ARATH DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana
GN=RH16 PE=2 SV=1
Length = 626
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 85 TWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIE 144
+++ LGL RLIRAL G +P+++Q +++ +L GKDVV A+TGSGKT +YL+PL++
Sbjct: 47 SFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQ 106
Query: 145 KLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANAL-----SADNGEPLVR 199
KL +A +S S K+ P + +L P+ LC+QV ++L L
Sbjct: 107 KLFSA-----DSVSKKKLAP---SAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTS 158
Query: 200 AVAVCGGQGWPIGKPDVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLLCGSFQ 259
+++ + G P+++VSTPA + + +V DEAD+LL ++
Sbjct: 159 SMSASDMRNALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYE 218
Query: 260 NQV 262
+ +
Sbjct: 219 DNL 221
Score = 39.3 bits (90), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 40/130 (30%)
Query: 426 RTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEKGGVF---VCTD- 481
+ ++F NT+D + + L+ GI+ + +L R L F G+F + TD
Sbjct: 303 KILIFINTIDMGFRLKLFLEKFGIKSAILNGELPQNSRLHILEQFN--AGLFDYLIATDD 360
Query: 482 ----------------------------------AAARGIDIPNVSHVIQADFATSAVDF 507
RGID V VI D S +
Sbjct: 361 NSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFKKVHTVINFDMPQSVTGY 420
Query: 508 LHRVGRTARA 517
+HR+GRT RA
Sbjct: 421 IHRIGRTGRA 430
>sp|Q8NJM2|DBP10_ASPFU ATP-dependent RNA helicase dbp10 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=dbp10 PE=3 SV=1
Length = 869
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 47/240 (19%)
Query: 86 WKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEK 145
++++GLS L++A+ GF P+ +Q ++ ++ +DVV A TGSGKT ++++P+IEK
Sbjct: 72 FQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEK 131
Query: 146 LCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCG 205
L + T A LVL P+ L Q +++ L G L ++V + G
Sbjct: 132 LKS------------HSTKVGARGLVLSPSRELALQTLKVVKELG--RGTDL-KSVLLVG 176
Query: 206 GQGWP------IGKPDVIVSTPAALLN-----NIDPKRRRRMEFVRGVKYVVFDEADMLL 254
G G PD+I++TP L+ N+D + ++YVVFDEAD L
Sbjct: 177 GDSLEEQFAMIAGNPDIIIATPGRFLHLKVEMNLD---------LSSIRYVVFDEADRLF 227
Query: 255 CGSFQNQVIRLINMFRFDE----------KQLSRMNESGVEKP--LEMDNSSLTQPDLQD 302
F Q+ +++ + K L +G+++P + +D S PDLQ+
Sbjct: 228 EMGFAAQLTEILHGLPANRQTLLFSATLPKSLVEFARAGLQEPTLVRLDTESKISPDLQN 287
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 427 TMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQE-KGGVFVCTDAAAR 485
T+VFA T V + +L AG + L R + NF+ + V TD AAR
Sbjct: 357 TIVFAATKHHVDYLYSLLCEAGFAVSYVYGSLDQTARKIQVQNFRTGMTNILVVTDVAAR 416
Query: 486 GIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESN 531
GIDIP +++VI DF + F+HRVGRTARAG+ G SL +++
Sbjct: 417 GIDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLVRDAD 462
>sp|Q29S22|DDX47_BOVIN Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus GN=DDX47
PE=2 SV=1
Length = 457
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 121/247 (48%), Gaps = 40/247 (16%)
Query: 81 DDNVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLV 140
++ T+K LG++D L A + G+ +P+ +Q ++ L G+D++ AETGSGKT ++ +
Sbjct: 23 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 82
Query: 141 PLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRA 200
P++ L TP R +LVL P L Q+ AL + G V+
Sbjct: 83 PILNALL--------------ETPQRLFALVLTPTRELAFQISEQFEALGSSIG---VQC 125
Query: 201 VAVCGG-----QGWPIG-KPDVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLL 254
+ GG Q + KP ++++TP L+++++ + + R +KY+V DEAD +L
Sbjct: 126 AVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNL---RALKYLVMDEADRIL 182
Query: 255 CGSFQNQVIRLINMFRFDE----------KQLSRMNESGVEKPLEMDNSSLTQPDLQDEE 304
F+ +V +++ + D K++ ++ + ++ P++ SS Q E
Sbjct: 183 NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSS----KYQTVE 238
Query: 305 NLQDEYI 311
LQ Y+
Sbjct: 239 KLQQYYL 245
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 428 MVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEKG-GVFVCTDAAARG 486
M+F +T + +L+ G H +S +R +L F+ K + + TD A+RG
Sbjct: 269 MIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRG 328
Query: 487 IDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESNRDLVDTIRRAAKLGQ 546
+DIP+V V+ D T + D++HRVGRTARAG+ G + T+ + +L I
Sbjct: 329 LDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKL 388
Query: 547 PV 548
PV
Sbjct: 389 PV 390
>sp|P0CR00|RRP3_CRYNJ ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RRP3 PE=3 SV=1
Length = 484
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 121/231 (52%), Gaps = 36/231 (15%)
Query: 80 ADDNVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYL 139
A N T+ LG+S L RA + GF +PS +QA ++ L GKD++ A+TGSGKT ++
Sbjct: 34 ASHNKTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFS 93
Query: 140 VPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVR 199
+P+++ L EN P P A LVL P L Q+ + +L + G VR
Sbjct: 94 LPILQTLW------EN------PQPFFA--LVLAPTRELAYQISQQVTSLGSGIG---VR 136
Query: 200 AVAVCGG-----QGWPIGK-PDVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADML 253
+ GG Q + K P +IV+TP L+++++ + + + +KY+V DEAD L
Sbjct: 137 TAVLVGGMDMMSQSIALSKRPHIIVATPGRLMDHLENTKGFSL---KSLKYLVMDEADRL 193
Query: 254 L---CGSFQNQVIRLI----NMFRFD---EKQLSRMNESGVEKPLEMDNSS 294
L G ++++++I N + F +++++ + + KP+ ++ SS
Sbjct: 194 LDLDFGPIIDKILKVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVSS 244
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 424 TSRTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEKG-GVFVCTDA 482
+S M+F TV ++ IL+ G H ++ R +L F+ G + V TD
Sbjct: 277 SSSMMIFTRTVADSQRLSIILRRLGFPAIPLHGQMTQSLRLASLNKFKSGGRSILVATDV 336
Query: 483 AARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESNRDLVDTI 538
A+RG+DIP V VI D T++ D++HRVGRTARAG+ G +L T+ + +++ I
Sbjct: 337 ASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITLVTQYDVEILQRI 392
>sp|P0CR01|RRP3_CRYNB ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=RRP3 PE=3 SV=1
Length = 484
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 121/231 (52%), Gaps = 36/231 (15%)
Query: 80 ADDNVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYL 139
A N T+ LG+S L RA + GF +PS +QA ++ L GKD++ A+TGSGKT ++
Sbjct: 34 ASHNKTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFS 93
Query: 140 VPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVR 199
+P+++ L EN P P A LVL P L Q+ + +L + G VR
Sbjct: 94 LPILQTLW------EN------PQPFFA--LVLAPTRELAYQISQQVTSLGSGIG---VR 136
Query: 200 AVAVCGG-----QGWPIGK-PDVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADML 253
+ GG Q + K P +IV+TP L+++++ + + + +KY+V DEAD L
Sbjct: 137 TAVLVGGMDMMSQSIALSKRPHIIVATPGRLMDHLENTKGFSL---KSLKYLVMDEADRL 193
Query: 254 L---CGSFQNQVIRLI----NMFRFD---EKQLSRMNESGVEKPLEMDNSS 294
L G ++++++I N + F +++++ + + KP+ ++ SS
Sbjct: 194 LDLDFGPIIDKILKVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVSS 244
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 424 TSRTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEKG-GVFVCTDA 482
+S M+F TV ++ IL+ G H ++ R +L F+ G + V TD
Sbjct: 277 SSSMMIFTRTVADSQRLSIILRRLGFPAIPLHGQMTQSLRLASLNKFKSGGRSILVATDV 336
Query: 483 AARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESNRDLVDTI 538
A+RG+DIP V VI D T++ D++HRVGRTARAG+ G +L T+ + +++ I
Sbjct: 337 ASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITLVTQYDVEILQRI 392
>sp|Q0CMM8|DBP10_ASPTN ATP-dependent RNA helicase dbp10 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=dbp10 PE=3 SV=1
Length = 928
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 47/240 (19%)
Query: 86 WKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEK 145
++++GL+ L++A+ GF P+ +Q ++ ++ +DVV A TGSGKT ++++P+IEK
Sbjct: 91 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMDDRDVVGMARTGSGKTAAFVIPMIEK 150
Query: 146 LCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCG 205
L S+S K A L+L P+ L Q +++ L +++V + G
Sbjct: 151 L--------KSHSSKFG----ARGLILSPSRELALQTLKVVKELGKGTD---LKSVLLVG 195
Query: 206 GQ------GWPIGKPDVIVSTPAALLN-----NIDPKRRRRMEFVRGVKYVVFDEADMLL 254
G G G PD++++TP L+ N+D + ++YVVFDEAD L
Sbjct: 196 GDSLEEQFGMMAGNPDIVIATPGRFLHLKVEMNLD---------LSSIRYVVFDEADRLF 246
Query: 255 CGSFQNQVIRLINMFRFDE----------KQLSRMNESGVEKP--LEMDNSSLTQPDLQD 302
F Q+ +++ K L +G+++P + +D S PDLQ+
Sbjct: 247 EMGFAAQLTEILHGLPTTRQTLLFSATLPKSLVEFARAGLQEPTLIRLDTESKISPDLQN 306
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 427 TMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEK-GGVFVCTDAAAR 485
T+VFA T V + +L+ AG + L R + NF+ + V TD AAR
Sbjct: 377 TIVFAATKHHVDYLYSLLREAGFAVSYAYGSLDQTARKIQVNNFRTGLSNILVVTDVAAR 436
Query: 486 GIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESN 531
GIDIP +++VI DF + F+HRVGRTARAG+ G SL +++
Sbjct: 437 GIDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLVRDAD 482
>sp|Q8GY84|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana
GN=RH10 PE=2 SV=2
Length = 456
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 118/226 (52%), Gaps = 24/226 (10%)
Query: 85 TWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIE 144
T+ LG+ + L++A E G+ PS +QA ++ L GKDV+ A+TGSGKT ++ +P+++
Sbjct: 10 TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69
Query: 145 KLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVC 204
L + DSE + P P + VL P L Q+ AL AD +R +
Sbjct: 70 ALLEYVYDSEPKKG-RRPDPAFF-ACVLSPTRELAIQIAEQFEALGADIS---LRCAVLV 124
Query: 205 GG-----QGWPIGK-PDVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLLCGSF 258
GG Q +GK P VIV+TP L +++ + + + +KY+V DEAD LL F
Sbjct: 125 GGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSL---KSLKYLVLDEADRLLNEDF 181
Query: 259 Q---NQVIRLINM----FRFD---EKQLSRMNESGVEKPLEMDNSS 294
+ NQ++ I + F F K++ ++ + + P++++ +S
Sbjct: 182 EKSLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAAS 227
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Query: 425 SRTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQE-KGGVFVCTDAA 483
S +M+F T D + +L++ G ++ +R L F+ + + VCTD A
Sbjct: 261 STSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVA 320
Query: 484 ARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTE 529
+RG+DIP+V VI D T++ D++HRVGRTARAG+ G+ SL +
Sbjct: 321 SRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQ 366
>sp|Q5BFU7|DBP10_EMENI ATP-dependent RNA helicase dbp10 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=dbp10 PE=3 SV=1
Length = 936
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 115/240 (47%), Gaps = 47/240 (19%)
Query: 86 WKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEK 145
++++GL+ L++A+ GF P+ +Q ++ ++ +DVV A TGSGKT ++++P+IEK
Sbjct: 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEK 152
Query: 146 LCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCG 205
L + T A L+L P+ L Q +++ L +++V + G
Sbjct: 153 LKS------------HSTKFGARGLILSPSRELALQTLKVVKELGKGTD---LKSVLLVG 197
Query: 206 GQ------GWPIGKPDVIVSTPAALLN-----NIDPKRRRRMEFVRGVKYVVFDEADMLL 254
G G G PD++++TP L+ N+D + +KYVVFDEAD L
Sbjct: 198 GDSLEEQFGMMAGNPDIVIATPGRFLHLKVEMNLD---------LSSIKYVVFDEADRLF 248
Query: 255 CGSFQNQVIRLIN---------MFRFD-EKQLSRMNESGVEKP--LEMDNSSLTQPDLQD 302
F Q+ +++ +F K L +G++ P + +D S PDLQ+
Sbjct: 249 EMGFAAQLTEILHGLPSTRQTLLFSATLPKSLVEFARAGLQDPTLVRLDTESKISPDLQN 308
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 427 TMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEK-GGVFVCTDAAAR 485
T+VFA T V + +L+ AG + L R + NF+ + V TD AAR
Sbjct: 376 TIVFAATKHHVDYLYSLLREAGFAVSYVYGSLDQTARKIQVQNFRTGISNILVVTDVAAR 435
Query: 486 GIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESN 531
GIDIP +++VI DF + F+HRVGRTARAG+ G SL +++
Sbjct: 436 GIDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLVRDAD 481
>sp|A3LV40|DBP9_PICST ATP-dependent RNA helicase DBP9 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DBP9 PE=3 SV=1
Length = 581
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 74 SSDTFFADDNVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGK-DVVIAAETGS 132
S+ + DDN +W S L RL++A++ GF P+++QA+++ L K D++ A TGS
Sbjct: 5 SASEAYVDDNSSWDSFHLDARLVQAIDQLGFEHPTLIQASAIPLALEEKRDIIAKASTGS 64
Query: 133 GKTHSYLVPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANAL--S 190
GKT +Y++P+I L T +++ E S++L P L QV++ L
Sbjct: 65 GKTGAYVIPIIHNLLT--------DAEVESGNHHIKSIILVPTRELSNQVLQFVEKLLVY 116
Query: 191 ADNGEPLVRAVAVCGGQ---GWPIGKPDVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVF 247
++N + A Q + KP++I+STPA L+ ++ + + + V+ +
Sbjct: 117 SNNRINAINLSANLSDQVVNSLLMNKPEIIISTPAKLIQVLEKNANKDLIDLSTVRNLTI 176
Query: 248 DEADMLLCGSFQNQVIRL 265
DE D++L + + +L
Sbjct: 177 DEVDLVLSYGYLEDLQKL 194
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 43/144 (29%)
Query: 426 RTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEK-GGVFVCTD--- 481
+T+VF N +D Y + L+ GI C + +L + R + + + + + TD
Sbjct: 271 KTLVFVNNIDRGYRLKLFLEQFGIRCCILNSELPINSRLHIVEEYNKNVYNLLIATDETN 330
Query: 482 ---------------------------------------AAARGIDIPNVSHVIQADFAT 502
+RG+D NV+ V+ D T
Sbjct: 331 DFTVEKDEQQQEESQDKKASSAKTKQSKKSKKQKKDTEYGVSRGVDFRNVACVLNFDLPT 390
Query: 503 SAVDFLHRVGRTARAGQYGLVTSL 526
++ ++HR+GRTARAG+ G+ S
Sbjct: 391 TSKAYIHRIGRTARAGKAGMALSF 414
>sp|A1DNG2|DBP10_NEOFI ATP-dependent RNA helicase dbp10 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp10
PE=3 SV=1
Length = 934
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 115/240 (47%), Gaps = 47/240 (19%)
Query: 86 WKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEK 145
++++GLS L++A+ GF P+ +Q ++ ++ +DVV A TGSGKT ++++P+IEK
Sbjct: 92 FQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEK 151
Query: 146 LCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCG 205
L + T A L+L P+ L Q +++ L G L ++V + G
Sbjct: 152 LKS------------HSTKVGARGLILSPSRELALQTLKVVKELG--RGTDL-KSVLLVG 196
Query: 206 GQGWP------IGKPDVIVSTPAALLN-----NIDPKRRRRMEFVRGVKYVVFDEADMLL 254
G G PD++++TP L+ N+D + ++YVVFDEAD L
Sbjct: 197 GDSLEEQFAMMAGNPDIVIATPGRFLHLKVEMNLD---------LSSIRYVVFDEADRLF 247
Query: 255 CGSFQNQVIRLINMFRFDE----------KQLSRMNESGVEKP--LEMDNSSLTQPDLQD 302
F Q+ +++ + K L +G+++P + +D S PDLQ+
Sbjct: 248 EMGFAAQLTEILHGLPANRQTLLFSATLPKSLVEFARAGLQEPTLVRLDTESKISPDLQN 307
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 427 TMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEK-GGVFVCTDAAAR 485
T+VFA T V + +L AG + L R + NF+ + V TD AAR
Sbjct: 377 TIVFAATKHHVDYLYSLLSEAGFAVSYVYGSLDQTARKIQVQNFRTGMTNILVVTDVAAR 436
Query: 486 GIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESN 531
GIDIP +++VI DF + F+HRVGRTARAG+ G SL +++
Sbjct: 437 GIDIPILANVINYDFPSQPKIFIHRVGRTARAGRKGWSYSLVRDAD 482
>sp|Q5B5E7|RRP3_EMENI ATP-dependent rRNA helicase rrp3 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rrp3 PE=3 SV=1
Length = 465
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 26/191 (13%)
Query: 85 TWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIE 144
++K LG+ D+L A EN G+ P+ +Q+ ++ L G+DV+ AETGSGKT ++ +P+++
Sbjct: 47 SFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALPMLQ 106
Query: 145 KLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVC 204
L A P LVL P L Q+ + L + G VR +
Sbjct: 107 ALMEA--------------PQTLFGLVLAPTRELAYQISQAFETLGSTIG---VRCAVIV 149
Query: 205 GG-----QGWPIG-KPDVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLLCGSF 258
GG Q +G KP +IV+TP LL++++ + + R +KY+ DEAD LL F
Sbjct: 150 GGMDMVAQSIALGKKPHIIVATPGRLLDHLENTKGFSL---RNLKYLAIDEADRLLDMDF 206
Query: 259 QNQVIRLINMF 269
+ ++I +
Sbjct: 207 GESLDKIIRIL 217
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 419 EFGAETSRTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEKG-GVF 477
EF +++ ++F TV V +L+ G H LS R L F+ + +
Sbjct: 282 EFAGQSA--IIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARLGALGKFRSRSRDIL 339
Query: 478 VCTDAAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTE 529
V TD AARG+DIP+V V D + ++HRVGRTARAG+ G+ S T+
Sbjct: 340 VATDVAARGLDIPSVDVVFNFDLPMDSKTYIHRVGRTARAGKSGVAISFVTQ 391
>sp|A5DY34|DRS1_LODEL ATP-dependent RNA helicase DRS1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DRS1 PE=3 SV=1
Length = 686
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 121/223 (54%), Gaps = 28/223 (12%)
Query: 85 TWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIE 144
T++ L LS ++++L+ GF P+ VQA+++ L GKD+V +A+TGSGKT +YL+P+IE
Sbjct: 197 TFQELQLSRPILKSLQQLGFTVPTPVQASTIPIALLGKDIVASAQTGSGKTAAYLIPIIE 256
Query: 145 KLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQV----VRMANALSADNGEPLVRA 200
+L +NS S K +++L P L QV ++ +S N V
Sbjct: 257 RLLYV----KNSTSTK--------AIILTPTRELAIQVHDVGRKLGQFVSNLNFGMAVGG 304
Query: 201 VAVCGGQGWPIGKPDVIVSTPAALLNNIDPKRRRRMEF-VRGVKYVVFDEADMLLCGSFQ 259
+++ + +PD++++TP L+++I R F V V+ ++ DEAD +L FQ
Sbjct: 305 LSLKQQEQQLKTRPDIVIATPGRLIDHI----RNSPSFSVEDVQVLIIDEADRMLEEGFQ 360
Query: 260 NQVIRLINMFRFDEKQL----SRMNESGVEKPLEMDNSSLTQP 298
++ ++++ ++Q + MN + ++ +++ SL +P
Sbjct: 361 EELTEILSLIPKQKRQTLLFSATMNNTKIQDLVQL---SLNKP 400
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 426 RTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEKGGVFVCTDAAAR 485
RT+VF T + + IL G+ H L+ E+R + F+ V +CTD AAR
Sbjct: 443 RTVVFTRTKVEAHKLRIILGLLGLTVAELHGALTQEQRLANVKAFKNNVNVLICTDLAAR 502
Query: 486 GIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESNRD 533
G+DI + +VI D + + HRVGRTARAG+ G S ES +D
Sbjct: 503 GLDI-RIEYVINYDMPKTYEIYTHRVGRTARAGRKGTSISFVGESMQD 549
>sp|Q4P3W3|DBP10_USTMA ATP-dependent RNA helicase DBP10 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DBP10 PE=3 SV=1
Length = 1154
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 43/204 (21%)
Query: 86 WKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSG--KDVVIAAETGSGKTHSYLVPLI 143
++S+GL L+R+L GF P+ +Q ++ ++S +DVV A TGSGKT +YL+PLI
Sbjct: 146 FQSMGLHPSLLRSLLIRGFTTPTPIQRQAIPAIMSQPPRDVVGMARTGSGKTLAYLIPLI 205
Query: 144 EKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVR----MANALSADNGE---- 195
+L N PT SL+LCP+ L Q++R +A AD GE
Sbjct: 206 NRL----------NGRHSPTFG-IKSLILCPSRELAVQILRVGKEIARGWKADAGEGQDS 254
Query: 196 --PLVRAVAVCGGQ------GWPIGKPDVIVSTPAALLN-----NIDPKRRRRMEFVRGV 242
+R + GG+ G PDV+++TP +L+ N+D ++ V
Sbjct: 255 RGEAIRWAIIVGGESLDEQFGIMSNNPDVVIATPGRMLHLTVEMNLD---------LKSV 305
Query: 243 KYVVFDEADMLLCGSFQNQVIRLI 266
+YVVFDEAD L F Q+ ++
Sbjct: 306 EYVVFDEADRLFEMGFAEQLEEML 329
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 426 RTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQE-KGGVFVCTDAAA 484
+T++F T V + +L T G C + L R + F+ + + + TD AA
Sbjct: 470 QTIIFCATKHHVEYLLLLLTTTGYACSHIYSSLDQATRGIQMSRFRRGQNSLLIVTDVAA 529
Query: 485 RGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTES 530
RGID+P + HV+ DF F+HRVGRTARAG+ G S+ T +
Sbjct: 530 RGIDLPVLEHVVNFDFPPQPRTFVHRVGRTARAGRNGWAWSMCTNA 575
>sp|A1CTZ6|DBP10_ASPCL ATP-dependent RNA helicase dbp10 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp10 PE=3 SV=1
Length = 935
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 47/240 (19%)
Query: 86 WKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEK 145
++++GLS L++A+ GF P+ +Q ++ ++ +DVV A TGSGKT ++++P+IEK
Sbjct: 91 FQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEK 150
Query: 146 LCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCG 205
L + T A L+L P+ L Q +++ L ++ V + G
Sbjct: 151 LRS------------HSTKVGARGLILSPSRELALQTLKVVKELGKGTD---LKCVLLVG 195
Query: 206 GQGWP------IGKPDVIVSTPAALLN-----NIDPKRRRRMEFVRGVKYVVFDEADMLL 254
G G PD++++TP L+ N+D + ++YVVFDEAD L
Sbjct: 196 GDSLEEQFTMMAGNPDIVIATPGRFLHLKVEMNLD---------LYSIRYVVFDEADRLF 246
Query: 255 CGSFQNQVIRLINMFRFDE----------KQLSRMNESGVEKP--LEMDNSSLTQPDLQD 302
F Q+ +++ + K L +G+++P + +D S PDLQ+
Sbjct: 247 EMGFAAQLTEILHGLPPNRQTLLFSATLPKSLVEFARAGLQEPTLIRLDTESKISPDLQN 306
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 427 TMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEK-GGVFVCTDAAAR 485
T+VFA T V + +L AG + L R + NF+ + V TD AAR
Sbjct: 376 TIVFAATKHHVDYLYSLLHEAGFAVSYVYGALDQTARKIQVQNFRSGLSNILVVTDVAAR 435
Query: 486 GIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESN 531
GIDIP +++VI DF + F+HRVGRTARAG+ G SL +++
Sbjct: 436 GIDIPILANVINYDFPSQPKIFIHRVGRTARAGRKGWSYSLVRDAD 481
>sp|Q6CT46|DBP3_KLULA ATP-dependent RNA helicase DBP3 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP3 PE=3 SV=1
Length = 504
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Query: 426 RTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQE-KGGVFVCTDAAA 484
+ ++FA V + LK G + H DLS ++R + L F+ K + + TD AA
Sbjct: 342 KVLIFALYKKEASRVERNLKYNGYDVAAIHGDLSQQQRTQALNEFKAGKCNLLLATDVAA 401
Query: 485 RGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESNRDLVDTIRRAAK- 543
RG+DIPNV VI F + D++HR+GRT RAGQYG +L+TE + L +
Sbjct: 402 RGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQYGTAHTLFTEQEKHLAGALVNVLNG 461
Query: 544 LGQPV 548
GQPV
Sbjct: 462 AGQPV 466
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 29/236 (12%)
Query: 68 VSDKNGSSDTFFADDNVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIA 127
VSD +GS+ + D + + D++ + E S F +P+ +QA S +L+GKDV+
Sbjct: 82 VSDPSGSNIVPYLD----FSQVSFIDQIQK--EISKFPKPTPIQAVSWPYLLAGKDVIGI 135
Query: 128 AETGSGKTHSYLVPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMAN 187
AETGSGKT ++ VP I + T+ GD +S LV+ P L Q+
Sbjct: 136 AETGSGKTFAFGVPAINNIVTS-GDKSSS----------VKVLVISPTRELASQIYDNLI 184
Query: 188 ALSADNGEPLVRAVAVCGG-----QGWPIGKPDVIVSTPAALLNNIDPKRRRRMEFVRGV 242
L+ G +R+ V GG Q + + V+V+TP LL+ I+ + V
Sbjct: 185 VLTDACG---LRSCCVYGGVPKDQQREDLRRSQVVVATPGRLLDLIEEGSVD----LSHV 237
Query: 243 KYVVFDEADMLLCGSFQNQVIRLINMFRFDEKQLSRMNESGVEKPLEMDNSSLTQP 298
Y+V DEAD +L F+ + ++I R +Q + ++ E+ +S +++P
Sbjct: 238 NYLVLDEADRMLEKGFEEDIKKIIRQTRSTSRQTLMFTATWPKEVRELASSFMSEP 293
>sp|Q54VT4|DDX47_DICDI Probable ATP-dependent RNA helicase ddx47 OS=Dictyostelium
discoideum GN=ddx47 PE=3 SV=1
Length = 546
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 27/222 (12%)
Query: 83 NVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPL 142
NVT++SLG+ ++I A GF +P +Q S+ L G+D++ A+TGSGKT ++++P+
Sbjct: 118 NVTFESLGVHPQIIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPV 177
Query: 143 IEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVA 202
++KL A P L L P L Q+ NA+ + G V+
Sbjct: 178 LQKLLEA--------------PQGLFCLALAPTRELAYQIADQFNAIGSTIG---VKTCV 220
Query: 203 VCGG-----QGWPIG-KPDVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLLCG 256
+ GG Q + KP V+V +P +L++++ + + R +KY + DEAD L
Sbjct: 221 LVGGIDSMSQSLALAKKPHVVVGSPGRVLHHLEHTKGFNL---RSIKYFIMDEADRLFSA 277
Query: 257 SFQNQVIRLINMFRFDEKQLSRMNESGVEKPLEMDNSSLTQP 298
F+ +V ++ + E+ + + K ++ +SL P
Sbjct: 278 DFEEEVNNILKVIP-KERNTYLFSATMTSKVAKLQRASLVNP 318
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 427 TMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNF-QEKGGVFVCTDAAAR 485
T++F +T + + +L+ G + D+ +R +L F Q + V TD AAR
Sbjct: 361 TIIFTSTCASSTKIAMMLRNLGFGAIPINGDMDQGKRLASLNKFKQGTKSILVATDVAAR 420
Query: 486 GIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESNRDLVDTIRRAAK 543
G+DIP+V VI D T++ +++HRVGRTARAG G ++ T+ + ++ I K
Sbjct: 421 GLDIPSVDLVINYDVPTNSKEYVHRVGRTARAGNSGRAITIVTQYDVEMYQRIEFVLK 478
>sp|Q0CIQ3|RRP3_ASPTN ATP-dependent rRNA helicase rrp3 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=rrp3 PE=3 SV=2
Length = 445
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 29/191 (15%)
Query: 85 TWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIE 144
T++ LG+ D L A E G+ P+ +Q + L G+D++ AETGSGKT ++++P+++
Sbjct: 29 TFRELGVIDSLCEACEELGYTAPTPIQERCIPIALEGRDLIGLAETGSGKTAAFVLPMLQ 88
Query: 145 KLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVC 204
L DK P + SL+L P L +Q+ AL A VR +
Sbjct: 89 ALM-----------DK---PQQFHSLILAPTRELAQQIAHTVEALGARIS---VRCTLLI 131
Query: 205 GG-----QGWPIG-KPDVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLL---C 255
GG Q +G KP VIV+TP LL++++ + + R +KY+V DEAD LL
Sbjct: 132 GGMDMISQAIALGKKPHVIVATPGRLLDHLENTKGFSL---RTLKYLVLDEADRLLDLDF 188
Query: 256 GSFQNQVIRLI 266
G ++++RL+
Sbjct: 189 GPILDKLLRLL 199
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 428 MVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEKG-GVFVCTDAAARG 486
++F TV ++ +L+ G H LS R +L F+ + + + TD AARG
Sbjct: 270 IIFTRTVHETQRLSIMLRNLGFPAIPIHGQLSQSARLASLNKFRARSRNLLIATDVAARG 329
Query: 487 IDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESNRDL 534
+DIP V +V+ D + ++HRVGRTARAG+ G+ S T+ +L
Sbjct: 330 LDIPAVDYVLNYDLPQDSKTYIHRVGRTARAGKSGIAFSFVTQYEVEL 377
>sp|A2QRY2|DBP10_ASPNC ATP-dependent RNA helicase dbp10 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp10 PE=3 SV=1
Length = 932
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 47/240 (19%)
Query: 86 WKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEK 145
++++GL+ L++A+ GF P+ +Q ++ ++ +DVV A TGSGKT ++++P+I+K
Sbjct: 92 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIQK 151
Query: 146 LCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCG 205
L + T A L+L P+ L Q +++ L ++AV + G
Sbjct: 152 LKS------------HSTQVGARGLILSPSRELALQTLKVVKELGKGTD---LKAVLLVG 196
Query: 206 GQGWP------IGKPDVIVSTPAALLN-----NIDPKRRRRMEFVRGVKYVVFDEADMLL 254
G G PD++++TP L+ N+D + ++YVVFDEAD L
Sbjct: 197 GDSLEEQFSMMAGNPDIVIATPGRFLHLKVEMNLD---------LSSIRYVVFDEADRLF 247
Query: 255 CGSFQNQVIRLIN---------MFRFD-EKQLSRMNESGVEKP--LEMDNSSLTQPDLQD 302
F Q+ +++ +F K L +G+++P + +D S PDLQ+
Sbjct: 248 EMGFAAQLTEILHGLPSTRQTLLFSATLPKSLVEFARAGLQEPTLVRLDTESKISPDLQN 307
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 427 TMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEK-GGVFVCTDAAAR 485
T++FA T V + +L AG + L R + NF+ + V TD AAR
Sbjct: 377 TIIFAATKHHVDYLYSLLNEAGFATSYAYGSLDQTARKIQVHNFRTGISNILVVTDVAAR 436
Query: 486 GIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESN 531
GIDIP +++VI DF + A F+HRVGRTARAG+ G SL +S+
Sbjct: 437 GIDIPILANVINYDFPSQAKIFVHRVGRTARAGRTGWSYSLVRDSD 482
>sp|A4REU9|MAK5_MAGO7 ATP-dependent RNA helicase MAK5 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=MAK5 PE=3 SV=2
Length = 760
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 20/208 (9%)
Query: 61 FAAAAAVVSDKNGSSDTFFADDNVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLS 120
FAA A + G+ D W+ LGLS+ ++ ++ F +P+ +QAA++ +L+
Sbjct: 171 FAALAEIDETDEGA-------DVSEWEPLGLSEEIMSSIAKLKFAKPTAIQAATIPEILA 223
Query: 121 GKDVVIAAETGSGKTHSYLVPLIEKLCTALGDSENSN-SDKEPTPPRAPSLVLCPNVVLC 179
G DVV A TGSGKT ++ +P++EK + +++ ++ E P A LVL P L
Sbjct: 224 GHDVVGKASTGSGKTLAFGIPIVEKWLSINASTQSKRVAEGETKTPIA--LVLSPTRELA 281
Query: 180 EQVV-RMANALSADNGEPLVRAVAVCGG-----QGWPIGKPDVIVSTPAALLNNIDPKRR 233
Q+ + N + P V +V GG Q + K D++V TP L + +
Sbjct: 282 HQLTDHIKNLCAGLATSPYV--CSVTGGLSVHKQQRQLEKADIVVGTPGRLWEVLSSSTK 339
Query: 234 RRMEFVRGVKYVVFDEADMLLC-GSFQN 260
F RG+K++V DEAD LL G F++
Sbjct: 340 LIQAF-RGIKFLVVDEADRLLSEGHFKD 366
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 424 TSRTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEK----GGVFVC 479
T RT+VF N++ +V +T +L+ + H + + R +++ F + +
Sbjct: 477 TQRTLVFTNSISSVRRLTPMLQQLTLPVIALHSQMIQKARLRSVERFTSSKPGSASILIA 536
Query: 480 TDAAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGL 522
TD AARG+DI + VI +A ++HR GRTARA GL
Sbjct: 537 TDVAARGLDIRGIDVVIHYHVPRTADAYVHRSGRTARADSSGL 579
>sp|Q1DZK8|DBP3_COCIM ATP-dependent RNA helicase DBP3 OS=Coccidioides immitis (strain RS)
GN=DBP3 PE=3 SV=2
Length = 515
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Query: 349 RSKQYIFVAATLPINGKKTAGAVLKQMFPDADWISGNYLHFHNPRLKEKWIEVTVDTQVD 408
+ +Q I AT PI + A + K P I + N R+K+ +EV + D
Sbjct: 277 QKRQTIMFTATWPIGVRNLAASFTKN--PVTVTIGDSSDIRANKRIKQ-MVEVLQPYEKD 333
Query: 409 A-LIEAVKERLEFGAETSRTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTL 467
+ L+E ++ + G R +VF V + + + G + H D+S ER ++L
Sbjct: 334 SRLLELLRRYQDGGKNNHRILVFCLYKKEAMRVERFIGSKGFKVAGIHGDMSQTERFRSL 393
Query: 468 VNFQEKG-GVFVCTDAAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSL 526
F+ + V TD AARG+DIP V V+ F + D++HR+GRT RAG GL +L
Sbjct: 394 EAFKSGSISLLVATDVAARGLDIPAVKLVLNVTFPLTIEDYVHRIGRTGRAGAEGLAITL 453
Query: 527 YTESNRDL 534
+TE ++ L
Sbjct: 454 FTERDKAL 461
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 19/163 (11%)
Query: 104 FGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEKLCTALGDSENSNSDKEPT 163
F P+ +QA S +G+D++ AETGSGKT ++ +P + ++ + NS + +P
Sbjct: 119 FSSPTPIQAVSWPLAFAGRDLIGVAETGSGKTLAFGLPCLRRVL----ELNNSETSCKPC 174
Query: 164 PPRAPSLVLCPN----VVLCEQVVRMANALSADNGEPLVRAVAVCGGQGWPIGKPDVIVS 219
+L++ P V + +Q++R ++A+ D G + + Q I V+++
Sbjct: 175 -----ALIITPTRELAVQIYDQLLRFSSAV--DVGIACIYGGSPKDHQRREIRNASVVIA 227
Query: 220 TPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLLCGSFQNQV 262
TP L + + + + GVKY+V DEAD +L F+ +
Sbjct: 228 TPGRLKDF----QADQTINLSGVKYLVLDEADRMLDKGFEQDI 266
>sp|Q6BLM5|DBP9_DEBHA ATP-dependent RNA helicase DBP9 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP9 PE=3 SV=1
Length = 586
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 35/202 (17%)
Query: 79 FADDNVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGK-DVVIAAETGSGKTHS 137
+ DD+ TW+S GL RL++A++ GF P+++Q++++ + K D++ A TGSGKT +
Sbjct: 16 YVDDSTTWESFGLDARLLQAIDQLGFENPTLIQSSAIPLAIEEKRDIIAKASTGSGKTAA 75
Query: 138 YLVPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPN--------------VVLCEQVV 183
Y +P+I+ L L D E T S++L P ++ C +
Sbjct: 76 YSIPIIQNL---LQD--------ESTEREIKSIILVPTRELSNQVSQFLEKLLIFCNSKI 124
Query: 184 RMANALSADNGEPLVRAVAVCGGQGWPIGKPDVIVSTPAALLNNIDPKRRRRMEFVRGVK 243
R+ N +S++ + ++ ++ I KP++IVSTPA L+ ++ + + VK
Sbjct: 125 RLIN-ISSNLSDQVINSLL--------INKPEIIVSTPAKLIQILEKNVNSNLINLSTVK 175
Query: 244 YVVFDEADMLLCGSFQNQVIRL 265
+ DE D++L + + +L
Sbjct: 176 NLTIDEVDLVLSYGYLEDLQKL 197
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 57/147 (38%), Gaps = 46/147 (31%)
Query: 426 RTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEK-GGVFVCTD--- 481
+T+VF N +D Y + L+ G+ C + +L + R + + + + + TD
Sbjct: 274 KTLVFVNNIDRGYRLKLFLEQFGVRCCILNSELPINSRLNIVEQYNKNVYNLLIATDETN 333
Query: 482 ------------------------------------------AAARGIDIPNVSHVIQAD 499
+RG+D NV+ V+ D
Sbjct: 334 DFTIQEDEKDEGEEIEENKNEENDGKTSKNTKKPNQKKDKEYGVSRGVDFRNVACVLNFD 393
Query: 500 FATSAVDFLHRVGRTARAGQYGLVTSL 526
TS+ ++HRVGRTARAG+ G+ S
Sbjct: 394 LPTSSKSYIHRVGRTARAGKSGMALSF 420
>sp|Q6CIR0|DBP10_KLULA ATP-dependent RNA helicase DBP10 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP10 PE=3 SV=1
Length = 973
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 35/209 (16%)
Query: 72 NGSSDTFFADDNVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETG 131
N ++D ++ S GLS ++ + GF +P+ +Q ++ +L +D+V A TG
Sbjct: 114 NTTADAAAKHKKGSFASFGLSKLVLINISKKGFRQPTPIQRKTIPLILQKRDIVGMARTG 173
Query: 132 SGKTHSYLVPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSA 191
SGKT ++++P+IEKL T +++L P+ L Q R+ S
Sbjct: 174 SGKTAAFVLPMIEKLKT------------HSAKIGVRAVILSPSRELAIQTHRVFKEFSK 221
Query: 192 DNGEPLVRAVAVCGGQ------GWPIGKPDVIVSTPAALLN-----NIDPKRRRRMEFVR 240
+ +R++ + GG G +G PDV+++TP L+ N+D ++
Sbjct: 222 GSD---LRSILLTGGDSLEDQFGMMMGNPDVVIATPGRFLHLKVEMNLD---------LK 269
Query: 241 GVKYVVFDEADMLLCGSFQNQVIRLINMF 269
V+YVVFDEAD L FQ Q+ L+ F
Sbjct: 270 SVEYVVFDEADRLFEMGFQEQLNELLVAF 298
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 427 TMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNFQEK-GGVFVCTDAAAR 485
T+VF T V VT++LK G + L+ R + L NF+ + V TD AAR
Sbjct: 421 TIVFVPTRHHVEYVTQLLKNCGYLVSYIYGALNQHARKQQLYNFRAGLTSILVVTDVAAR 480
Query: 486 GIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTES 530
G+DIP +++VI S+ F+HRVGRTARAG G S+ +E+
Sbjct: 481 GVDIPLLANVINYSLPGSSKIFIHRVGRTARAGNRGWAFSIVSEN 525
>sp|Q75B50|DED1_ASHGO ATP-dependent RNA helicase DED1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DED1
PE=3 SV=2
Length = 623
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 350 SKQYIFVAATLPINGKKTAGAVLKQMFPDADWISGNYLHFHNPRLKEKWIEVTVDTQVDA 409
++Q + +AT P + + A LK D ++S + + + +K + V +
Sbjct: 337 NRQTLMFSATFPTDIQHLAADFLK----DYIFLSVGRVGSTSENITQKVLHVEDIDKRSV 392
Query: 410 LIEAVKERLEFGAETSRTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVN 469
L++ L ++ T+VF T A+T L + H D + ER + L
Sbjct: 393 LLD-----LLAASDGGLTLVFVETKRMADALTDFLIMQNLSATAIHGDRTQAERERALAF 447
Query: 470 FQE-KGGVFVCTDAAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYT 528
F+ + V V T AARG+DIPNV+HVI D + D++HR+GRT RAG GL T+ +
Sbjct: 448 FRTGRANVLVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGLATAFFN 507
Query: 529 ESNRDLV 535
N+++V
Sbjct: 508 RGNKNVV 514
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 13/182 (7%)
Query: 91 LSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEKLCTAL 150
L + L+ ++ + F +P+ VQ SV V G+D++ A+TGSGKT +L P++ + +
Sbjct: 153 LDELLLENIKLARFTKPTPVQKYSVPIVAKGRDLMACAQTGSGKTGGFLFPVLSQSFSNG 212
Query: 151 GDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCGG---- 206
S S ++VL P L Q+ A + V+ V GG
Sbjct: 213 PASTPDESGYYMRKAYPTAVVLAPTRELATQIFDEAKKFTY---RSWVKPCVVYGGADIR 269
Query: 207 -QGWPIGKP-DVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLLCGSFQNQVIR 264
Q + + D+IV+TP L + ++ R ++ VKY+V DEAD +L F+ Q+
Sbjct: 270 QQIRELERGCDLIVATPGRLNDLLE---RGKISLC-SVKYLVLDEADRMLDMGFEPQIRH 325
Query: 265 LI 266
++
Sbjct: 326 IV 327
>sp|Q6FS54|DBP3_CANGA ATP-dependent RNA helicase DBP3 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP3 PE=3 SV=1
Length = 540
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 341 RRVRKNYQRSKQYIFVAATLPINGKKTAGAVLKQ----MFPDADWISGN-----YLHFHN 391
R + + + +Q + AT P ++ A +K+ + D +S N + +
Sbjct: 295 RIIGQTKSKDRQTLMFTATWPKEVRELASTFMKEPVKVSIGNRDELSANKRITQIVEVVD 354
Query: 392 PRLKEKWIEVTVDTQVDALIEAVKERLEFGAETSRTMVFANTVDAVYAVTKILKTAGIEC 451
PR KE+ L++ +K+ + + ++FA V + L G +
Sbjct: 355 PRSKER-----------KLLDLLKKYQSGPKKNDKVLIFALYKKEASRVERNLNYNGYKV 403
Query: 452 YCYHKDLSLEERAKTLVNFQE-KGGVFVCTDAAARGIDIPNVSHVIQADFATSAVDFLHR 510
H DLS ++R + L F+ K + + TD AARG+DIPNV VI F + D++HR
Sbjct: 404 AAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHR 463
Query: 511 VGRTARAGQYGLVTSLYTESNRDL 534
+GRT RAGQ G +L+TE + L
Sbjct: 464 IGRTGRAGQTGTAHTLFTEQEKHL 487
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 100 ENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEKLCTALGDSENSNSD 159
E + F +P+ +QA S +LSGKDV+ AETGSGKT ++ VP I L T+
Sbjct: 144 EIAKFPKPTPIQAVSWPYLLSGKDVIGVAETGSGKTFAFGVPAINNLLTS---------- 193
Query: 160 KEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCGG-----QGWPIGKP 214
P LV+ P L Q+ L+ G + V GG Q I K
Sbjct: 194 -SSKPKGIKVLVISPTRELASQIYDNLVLLTQKVG---IDCCVVYGGVPKDDQRRQIAKS 249
Query: 215 DVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLLCGSFQNQVIRLINMFRFDEK 274
+V+V+TP LL+ I+ + V Y+V DEAD +L F+ + R+I + ++
Sbjct: 250 NVVVATPGRLLDLIEEGSVD----LSPVDYMVLDEADRMLEKGFEEDIKRIIGQTKSKDR 305
Query: 275 Q 275
Q
Sbjct: 306 Q 306
>sp|Q5A4E2|DED1_CANAL ATP-dependent RNA helicase DED1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DED1 PE=3 SV=1
Length = 672
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 10/188 (5%)
Query: 349 RSKQYIFVAATLPINGKKTAGAVLKQMFPDADWISGNYLHFHNPRLKEKWIEVTVDTQVD 408
+ +Q + +AT P + + A LK D ++S + + + +K + V D +
Sbjct: 377 KDRQTLMFSATFPRDIQMLARDFLK----DYVFLSVGRVGSTSENITQKILYVEDDEKKS 432
Query: 409 ALIEAVKERLEFGAETSRTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLV 468
+++ + E T+VF T + L G H D S ER K L
Sbjct: 433 VILDLLSAN-----ENGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQYEREKALA 487
Query: 469 NFQEKGG-VFVCTDAAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLY 527
F+ + V T AARG+DIPNVSHVI D + D++HR+GRT RAG G+ T+ +
Sbjct: 488 AFKNGAAPILVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFF 547
Query: 528 TESNRDLV 535
+N+++V
Sbjct: 548 NRNNKNVV 555
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 18/185 (9%)
Query: 91 LSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLI-EKLCTA 149
L + L+ ++ S F +P+ VQ SV V +G+D++ A+TGSGKT +L P++ E
Sbjct: 193 LDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESYMKG 252
Query: 150 LGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCGGQGW 209
SN LV+ P L Q+ + S VRA V GG
Sbjct: 253 PAPVPESNGAFSSHKVYPTILVMAPTRELVSQIYEESKKFSY---RSWVRACVVYGGA-- 307
Query: 210 PIGKP--------DVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLLCGSFQNQ 261
IG+ D++V+TP L + +D R + ++Y+V DEAD +L F+ Q
Sbjct: 308 DIGQQMRNMDRGCDLLVATPGRLKDLLD----RGKVSLANIRYLVLDEADRMLDMGFEPQ 363
Query: 262 VIRLI 266
+ ++
Sbjct: 364 IRYIV 368
>sp|A7EAY2|MAK5_SCLS1 ATP-dependent RNA helicase mak5 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=mak5 PE=3 SV=1
Length = 780
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 86 WKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEK 145
W L LS + AL GF +P+ +Q+ ++ VL+G DVV A TGSGKT ++ +P++EK
Sbjct: 215 WVELDLSSNTLMALSKMGFSKPTPIQSEAIPEVLAGHDVVGKASTGSGKTLAFGIPIVEK 274
Query: 146 LCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAV-AVC 204
G+ + K PP A L+L P L Q+ L G P V AV
Sbjct: 275 WLEVYGELDEDELKKSTRPPTA--LILSPTRELAHQLTEHITTLC--KGMPTSPYVAAVT 330
Query: 205 GG-----QGWPIGKPDVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLLCGSFQ 259
GG Q + K D+I+ TP L I ++ V+++V DEAD LL
Sbjct: 331 GGLSVQKQQRQLSKADIIIGTPGRLWEVISSSNELSA-GLKQVRFLVIDEADRLLTDGHF 389
Query: 260 NQVIRLINMF 269
+ ++N
Sbjct: 390 KEAEEILNAL 399
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 426 RTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVNF---QEKGGVFVCTDA 482
RT++F N++ +V +T +L+T I + H + + R +++ F G V V TD
Sbjct: 505 RTLIFTNSIHSVRRLTPMLQTLNIPAHSLHSQMIQKARMRSIEKFSRTNNTGSVLVATDV 564
Query: 483 AARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYTESNRDLVDTIRRAA 542
AARG+DI V VI +A ++HR GRTARA G +S+ ++V T R A
Sbjct: 565 AARGLDIGGVQLVIHYHLPRTADMYVHRSGRTARAAASG--SSILLCGPEEVVGTRRLVA 622
Query: 543 KL 544
K+
Sbjct: 623 KV 624
>sp|A5DQS0|DED1_PICGU ATP-dependent RNA helicase DED1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DED1 PE=3 SV=3
Length = 637
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 350 SKQYIFVAATLPINGKKTAGAVLKQMFPDADWISGNYLHFHNPRLKEKWIEVTVDTQVDA 409
S+Q + +AT P + + A LK D ++S + + + +K + V D +
Sbjct: 361 SRQTLMFSATFPRDIQMLARDFLK----DYIFLSVGRVGSTSENITQKVLYVEDDEKKSV 416
Query: 410 LIEAVKERLEFGAETSRTMVFANTVDAVYAVTKILKTAGIECYCYHKDLSLEERAKTLVN 469
L++ + + T++F T + L G H D S ER K L
Sbjct: 417 LLDLLSAN-----DNGLTIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAA 471
Query: 470 FQEKGG-VFVCTDAAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSLYT 528
F+ + V T AARG+DIPNVSHV+ D D++HR+GRT RAG G+ T+ +
Sbjct: 472 FKSGTAPILVATAVAARGLDIPNVSHVVNYDLPGDIDDYVHRIGRTGRAGNVGIATAFFN 531
Query: 529 ESNRDLV 535
+NR++V
Sbjct: 532 RNNRNVV 538
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 24/184 (13%)
Query: 95 LIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEKLCT----AL 150
++ ++ S F +P+ VQ SV V SG+D++ A+TGSGKT +L P++ + A+
Sbjct: 180 IVENIKLSRFTKPTPVQKYSVPIVASGRDLMACAQTGSGKTGGFLFPVLSESYMNGPDAV 239
Query: 151 GDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCGGQGWP 210
+S+ + S + P +LV+ P L Q+ A S + VR V GG
Sbjct: 240 PESQGAFSSHKVHP---TALVMAPTRELVSQIFEEAKKFSYRS---WVRPCVVYGGAD-- 291
Query: 211 IGKP--------DVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLLCGSFQNQV 262
IG D++V+TP L + ++ R R+ + +KY+V DEAD +L F+ Q+
Sbjct: 292 IGTQIRNLDRGCDLLVATPGRLKDLLE---RGRVS-LSNIKYLVLDEADRMLDMGFEPQI 347
Query: 263 IRLI 266
++
Sbjct: 348 RHIV 351
>sp|Q4IF76|DBP2_GIBZE ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP2 PE=3
SV=1
Length = 555
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 341 RRVRKNYQRSKQYIFVAATLPINGKKTAGAVLKQMFPDADWISGNYLHFH---NPRLKEK 397
R++ + +Q + +AT P + A L+ D+I N N R+ +
Sbjct: 303 RKIIGQIRPDRQTLMWSATWPKEVRALASDFLQ------DFIQVNIGSMELAANHRITQI 356
Query: 398 WIEVTVDTQVDALIEAVKERLEFGAETSRTMVFANTVDAVYAVTKILKTAGIECYCYHKD 457
VT + D +I+ +++ +E + ++ ++F T +T+ L+ G H D
Sbjct: 357 VEVVTEMEKRDRMIKHMEKVME--NKENKILIFVGTKRVADEITRFLRQDGWPALSIHGD 414
Query: 458 LSLEERAKTLVNFQE-KGGVFVCTDAAARGIDIPNVSHVIQADFATSAVDFLHRVGRTAR 516
ER L F+ K + V TD A+RGID+ N++HV+ D+ ++ D++HR+GRT R
Sbjct: 415 KQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGR 474
Query: 517 AGQYGLVTSLYTESN----RDLVDTIRRAAKLGQP 547
AG G +L+T N RDLV+ ++ A + P
Sbjct: 475 AGAMGTAITLFTTDNQKQARDLVNVLQEAKQQIDP 509
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 28/201 (13%)
Query: 85 TWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIE 144
T+ G ++ ++ GF P+ +Q+ LSG+DVV AETGSGKT +Y +P I
Sbjct: 135 TFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIV 194
Query: 145 KLCTALGDSENSNSDKEPTPPRAP-SLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAV 203
+ N+ P P LVL P L Q+ + +R V
Sbjct: 195 HI----------NAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSS---RIRNTCV 241
Query: 204 CGGQGWPIGKP--------DVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLLC 255
GG P G +V ++TP L++ ++ + +R V Y+V DEAD +L
Sbjct: 242 YGGV--PKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTN----LRRVTYLVLDEADRMLD 295
Query: 256 GSFQNQVIRLINMFRFDEKQL 276
F+ Q+ ++I R D + L
Sbjct: 296 MGFEPQIRKIIGQIRPDRQTL 316
>sp|A5E572|DBP9_LODEL ATP-dependent RNA helicase DBP9 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP9 PE=3 SV=1
Length = 606
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 111/217 (51%), Gaps = 40/217 (18%)
Query: 66 AVVSDKNGSSDTFFADDNVTWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGK-DV 124
++ S K ++ + DD TW SL L RL++A++ GF P+++Q++++ L K D+
Sbjct: 2 SLKSTKTTAASETYLDDETTWDSLNLDPRLLQAIDKLGFENPTLIQSSAIPLALEEKRDI 61
Query: 125 VIAAETGSGKTHSYLVPLIEKLC---TALGDSENSNSDKEPTPPRAPSLVLCPNVVLC-- 179
+ A TGSGKT +Y +P+I+ + + LG S+VL P L
Sbjct: 62 IAKASTGSGKTAAYAIPIIQNIMVQGSQLG---------------TQSVVLVPTRELSNQ 106
Query: 180 -----EQVVRMAN------ALSADNGEPLVRAVAVCGGQGWPIGKPDVIVSTPAALLNNI 228
EQ+++ +N LS++ + +++++ I KP++I+STP+ L+ +
Sbjct: 107 VYQFMEQLIKFSNNKIGILNLSSNYSDQVLKSLL--------INKPEIIISTPSKLIQTL 158
Query: 229 DPKRRRRMEFVRGVKYVVFDEADMLLCGSFQNQVIRL 265
+ + + + VK + DE D++L +++ + +L
Sbjct: 159 EAHEGKDIIDLSTVKNLTIDEVDLILSFGYKDDLQKL 195
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 482 AAARGIDIPNVSHVIQADFATSAVDFLHRVGRTARAGQYGLVTSL 526
+RG+D NV+ V+ D T++ ++HRVGRTARAG+ G+ S
Sbjct: 397 GVSRGVDFRNVACVLNFDLPTTSKSYVHRVGRTARAGKSGMALSF 441
>sp|A7E449|DBP2_SCLS1 ATP-dependent RNA helicase dbp2 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=dbp2 PE=3 SV=1
Length = 572
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 399 IEVTVDTQVDALIEAVKE---------RLEFGAET--SRTMVFANTVDAVYAVTKILKTA 447
+E++ + ++ ++E V E LE E ++ ++F T +T+ L+
Sbjct: 360 LELSANHRITQIVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQD 419
Query: 448 GIECYCYHKDLSLEERAKTLVNFQE-KGGVFVCTDAAARGIDIPNVSHVIQADFATSAVD 506
G H D ER L F+ K + V TD A+RGID+ N++HV D+ ++ D
Sbjct: 420 GWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSED 479
Query: 507 FLHRVGRTARAGQYGLVTSLYTESN----RDLVDTIRRAAKLGQP 547
++HR+GRT RAGQ G +L+T N RDLV+ + A ++ P
Sbjct: 480 YIHRIGRTGRAGQKGTAITLFTTDNQKQARDLVNVLTEAKQVIDP 524
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 24/197 (12%)
Query: 85 TWKSLGLSDRLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIE 144
T+ G ++ ++ GF P+ +Q+ LSG+DVV AETGSGKT +Y +P I
Sbjct: 150 TFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIV 209
Query: 145 KLCTALGDSENSNSDKEPTPPRAP-SLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAV 203
+ N+ P P LVL P L Q+ + + +R V
Sbjct: 210 HI----------NAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSS---RIRNTCV 256
Query: 204 CGG--QGWPI----GKPDVIVSTPAALLNNIDPKRRRRMEFVRGVKYVVFDEADMLLCGS 257
GG +G I +V ++TP L++ I+ + +R V Y+V DEAD +L
Sbjct: 257 YGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTN----LRRVTYLVLDEADRMLDMG 312
Query: 258 FQNQVIRLINMFRFDEK 274
F+ Q+ +++ R D +
Sbjct: 313 FEPQIRKILGQIRPDRQ 329
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 204,381,837
Number of Sequences: 539616
Number of extensions: 8889389
Number of successful extensions: 30587
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 340
Number of HSP's that attempted gapping in prelim test: 26584
Number of HSP's gapped (non-prelim): 3052
length of query: 548
length of database: 191,569,459
effective HSP length: 123
effective length of query: 425
effective length of database: 125,196,691
effective search space: 53208593675
effective search space used: 53208593675
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)