Query 045760
Match_columns 700
No_of_seqs 275 out of 1768
Neff 6.4
Searched_HMMs 13730
Date Mon Mar 25 08:45:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045760.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045760hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1usua_ d.14.1.8 (A:) Heat sho 100.0 1.4E-85 1E-89 673.7 23.4 255 265-519 2-256 (256)
2 d2gqpa1 d.122.1.1 (A:74-337) H 100.0 1.4E-57 9.9E-62 460.4 20.9 206 6-212 1-211 (227)
3 d2iwxa1 d.122.1.1 (A:2-214) HS 100.0 6.5E-56 4.7E-60 444.3 22.8 208 5-212 2-209 (213)
4 d1uyla_ d.122.1.1 (A:) HSP90 { 100.0 7E-56 5.1E-60 443.3 22.1 207 5-212 1-207 (208)
5 d1sf8a_ d.271.1.1 (A:) Chapero 100.0 5.6E-33 4.1E-37 251.5 12.4 114 542-665 1-114 (115)
6 d1h7sa2 d.122.1.2 (A:29-231) D 99.5 7.9E-15 5.8E-19 144.4 10.9 152 26-204 4-168 (203)
7 d1b63a2 d.122.1.2 (A:-2-216) D 99.5 2.1E-13 1.5E-17 135.6 13.7 156 22-204 18-185 (218)
8 d2hkja3 d.122.1.2 (A:10-228) T 99.4 9.4E-13 6.8E-17 130.7 11.6 153 31-205 25-191 (219)
9 d1pvga2 d.122.1.2 (A:7-245) DN 98.2 1E-05 7.5E-10 80.2 14.3 159 32-212 57-234 (239)
10 d1kija2 d.122.1.2 (A:9-220) DN 98.1 1.1E-05 8.2E-10 78.5 12.7 159 31-211 29-199 (212)
11 d1ei1a2 d.122.1.2 (A:2-220) DN 97.9 3.1E-05 2.2E-09 75.7 11.3 155 31-212 37-207 (219)
12 d1jm6a2 d.122.1.4 (A:1177-1366 97.8 7.2E-06 5.2E-10 78.4 5.0 115 31-180 63-177 (190)
13 d1gkza2 d.122.1.4 (A:186-378) 97.8 7.1E-06 5.2E-10 78.1 5.0 119 32-180 57-186 (193)
14 d1id0a_ d.122.1.3 (A:) Histidi 97.6 1.9E-05 1.4E-09 72.2 4.5 73 32-134 48-120 (146)
15 d2c2aa2 d.122.1.3 (A:321-481) 97.6 1.7E-05 1.3E-09 73.5 3.9 80 32-134 53-134 (161)
16 d1y8oa2 d.122.1.4 (A:177-301) 97.4 7.7E-05 5.6E-09 64.8 6.3 56 32-93 68-123 (125)
17 d1bxda_ d.122.1.3 (A:) Histidi 97.4 2.5E-05 1.8E-09 72.6 2.8 74 32-133 51-124 (161)
18 d1ysra1 d.122.1.3 (A:299-446) 97.4 6.7E-05 4.9E-09 68.5 5.1 75 32-134 48-122 (148)
19 d1th8a_ d.122.1.3 (A:) Anti-si 97.2 0.00017 1.2E-08 65.0 6.1 85 31-142 42-126 (139)
20 d1s14a_ d.122.1.2 (A:) Topoiso 96.4 0.0097 7.1E-07 55.0 11.0 146 29-211 6-155 (168)
21 d1ixma_ d.123.1.1 (A:) Sporula 96.0 0.0012 9E-08 59.2 2.4 52 32-95 101-154 (179)
22 d1r62a_ d.122.1.3 (A:) Nitroge 95.8 0.0012 8.6E-08 60.2 1.4 79 32-133 48-130 (156)
23 d1j20a2 d.210.1.1 (A:171-395) 25.0 35 0.0025 31.7 5.0 40 64-126 44-83 (225)
No 1
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.4e-85 Score=673.74 Aligned_cols=255 Identities=71% Similarity=1.143 Sum_probs=240.3
Q ss_pred CCCCccCCCCCCCHHHHHHHHHHHhcCccCcccceeeecccceeeEEEEEecCCCCCCcccCCCCCCceEEEeeeeeccc
Q 045760 265 QKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMD 344 (700)
Q Consensus 265 ~~~~W~r~~~~i~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~i~Ly~~rv~I~d 344 (700)
.+|||+|+|++||+|||++||++++++|++||+|+|+++||+++|+||||||+++|+++|+....++||+||||||||+|
T Consensus 2 tkpiW~r~~~eit~eeY~~FYk~l~~~~~~Pl~~iH~~~eg~~~~~~lLyiP~~~p~~~~~~~~~~~~ikLY~~rVfI~d 81 (256)
T d1usua_ 2 TKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITD 81 (256)
T ss_dssp CCCGGGSCGGGCCHHHHHHHHHHHHCCSSCCSEEEEEEECSSSCEEEEEEECSSCCTTTTCC----CCEEEEETTEEEES
T ss_pred CCCCccCCchhCCHHHHHHHHHhhcCCccCCceeEEeeeeeeEEEEEEEEecccCcchhhhhhhhcCCeEEEEEeeeecc
Confidence 58999999999999999999999999999999999999999999999999999999999976555789999999999999
Q ss_pred cccccccccccceeeeecCCCCCCccchhhhccchHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhhhhhcccccC
Q 045760 345 NCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHED 424 (700)
Q Consensus 345 ~~~~llP~~l~Fv~gvVds~dLplnvSRE~lq~~~~l~~i~~~l~~k~~~~l~~l~~d~e~y~~f~~~~~~~lK~G~~~D 424 (700)
+|++|||+||+||||||||+|||||||||+||+|+++++|++.|++||+++|+++++|+++|.+||++||.+||+||++|
T Consensus 82 ~~~~llP~~L~FvkGVVDS~DlpLNVSRE~LQ~~~~l~kI~~~i~kkv~~~L~~~~~d~eky~~fw~~fg~~lK~G~~~D 161 (256)
T d1usua_ 82 EAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHED 161 (256)
T ss_dssp CCTTSSCGGGTTCEEEEEESSCCSCC------CCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chhhHHHHHHHHhhhccccccCCcccchhhhcccHHHHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHHhHHHhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999998999999999999999999999999
Q ss_pred hhhHHHHhccccccccCCCCceecHHHHHHhhccCCCcEEEEeCCCHHHHhcChhHHHHHHcCCEEEEeCCCchHHHHHH
Q 045760 425 STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQ 504 (700)
Q Consensus 425 ~~~~~~l~~llrf~ss~~~~~~~sL~eYv~rm~~~q~~IYy~~~~~~~~~~~sp~le~~~~kg~eVL~l~dpiDe~~l~~ 504 (700)
..|++++++||||+||.+.++++||+||++||+++|+.|||++|++++.+++|||+|+|++||+|||+|+|||||||+++
T Consensus 162 ~~~~e~l~~ll~f~ss~s~~e~~SL~eYvermke~Qk~IyYi~~~s~~~~~~sP~lE~~k~kg~EVL~l~dpiDe~~i~~ 241 (256)
T d1usua_ 162 TQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQ 241 (256)
T ss_dssp TTTHHHHHTTCEEEETTEEEEEEEHHHHHHTSCTTCCEEEEEECSSHHHHHTCTTHHHHHHTTCCEEEECSHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhccCCCcceeeHHHHHhhccccccceEEEecCCHHHHHcCHHHHHHHHCCCEEEEecCchHHHHHHH
Confidence 99999999999999998777899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCceeEEeccc
Q 045760 505 LKEFEGKKLVSATKE 519 (700)
Q Consensus 505 L~~y~gk~f~sV~~~ 519 (700)
|++|+|++|+||+++
T Consensus 242 l~e~~~kkf~sV~ke 256 (256)
T d1usua_ 242 LKEFEGKTLVDITKD 256 (256)
T ss_dssp HCEETTEEEEETTCC
T ss_pred HHHhCCCceeecCCC
Confidence 999999999999874
No 2
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]}
Probab=100.00 E-value=1.4e-57 Score=460.37 Aligned_cols=206 Identities=56% Similarity=0.902 Sum_probs=177.6
Q ss_pred cccchhhhHHHHHHHHHHcCCCCchhHHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCCCC
Q 045760 6 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIG 85 (700)
Q Consensus 6 e~~~Fq~e~~~ll~ll~~~LYs~~~iflRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGiG 85 (700)
|+|+||||+++||+||+++|||||++|||||||||+|||+|+|+++++++.......++.|.|.+++++++|+|+|||+|
T Consensus 1 e~~~Fq~e~~~ll~ll~~sLYs~~~iflRELiqNA~DA~~k~r~~~~~~~~~~~~~~~~~i~i~~d~~~~~l~i~DnGiG 80 (227)
T d2gqpa1 1 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVG 80 (227)
T ss_dssp TEECCCHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHCTTTTTTCCCCCEEEEEETTTTEEEEEECSCC
T ss_pred CceeeehhHHHHHHHHHhcccCCCchhHHHHHhhHHHHHHHHHHHhccCcccccccchhhhhcccCCCCcEEEEEecCcc
Confidence 68999999999999999999999999999999999999999999998888777777788999999999999999999999
Q ss_pred CCHHHHHHHHhHhhhcCchhHHHHHhcC-----CCCccccccccchhheeeecceEEEEEecCCCceEEEEEccCceEEE
Q 045760 86 MTKADLVNNLGTIARSGTKEFMEALAAG-----ADVSMIGQFGVGFYSAYLVAEKVIVTAKHNDDEQYIWESQAGGSFTV 160 (700)
Q Consensus 86 Mt~~dl~~~l~tIa~S~~~~f~~~~~~~-----~~~~~IG~FGIGf~S~F~vadkv~V~Sk~~~~~~~~w~s~~~~~~~i 160 (700)
||++++.++|+|||+||++.|.++++.. .+..+|||||||||||||||++|+|+|++.++.++.|.++|++.|++
T Consensus 81 Mt~~e~~~~lgtIa~Sgt~~f~~~~~~~~~~~~~~~~~IGqFGvGfyS~FmVad~V~v~s~~~~~~~~~W~s~g~~~~~i 160 (227)
T d2gqpa1 81 MTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVI 160 (227)
T ss_dssp CCHHHHHHHHHCC---------------------CHHHHHHTTCGGGGGGGTEEEEEEEEECTTSCCEEEEESSSCEEEE
T ss_pred ccHHHHHHHHHHHhhcchHHHHHhhhhcccccccchhhhhhcCcceeEEEeeeeeEEEEEeccCCcccEEEecCCCceec
Confidence 9999999999999999999998877531 23568999999999999999999999998888899999999999999
Q ss_pred EeCCCCCCCCCceEEEEEeccchhhhccHHHHHHHHHHHhCCCCcceEEeee
Q 045760 161 TRDTSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIE 212 (700)
Q Consensus 161 ~~~~~~~~~~~GT~I~L~lk~~~~e~l~~~~i~~ii~~ys~~l~~PI~l~~~ 212 (700)
... .++..++||+|+|||+++..+|++.++|+++|++||+||+|||+|+..
T Consensus 161 ~~~-~~~~~~rGT~I~L~Lk~d~~efl~~~rl~~iIkkYs~fI~~PI~l~~~ 211 (227)
T d2gqpa1 161 ADP-RGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSS 211 (227)
T ss_dssp ECT-TCSCSSSEEEEEEEECGGGGGGGCHHHHHHHHHHHHTTCSSCEEEEEE
T ss_pred ccc-cccccccceEEEEEecccchhhcCHHHHHHHHHHHhcCCCCCeEeCcc
Confidence 873 235678999999999999999999999999999999999999999753
No 3
>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=6.5e-56 Score=444.32 Aligned_cols=208 Identities=70% Similarity=1.090 Sum_probs=189.5
Q ss_pred ccccchhhhHHHHHHHHHHcCCCCchhHHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCCC
Q 045760 5 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGI 84 (700)
Q Consensus 5 ~e~~~Fq~e~~~ll~ll~~~LYs~~~iflRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGi 84 (700)
+|+|+||+|+++||+||+++|||||.+|||||||||+|||++||+++++++.......++.|+|.+|+++++|+|.|||+
T Consensus 2 ~e~~~Fqae~~~ll~ll~~~lYs~~~iflRELiqNa~DA~~~~~~~~~~~~~~~~~~~~~~I~i~~d~~~~~l~i~DnGi 81 (213)
T d2iwxa1 2 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGI 81 (213)
T ss_dssp CEEEECCHHHHHHHHHHHHCCCSCTTHHHHHHHHHHHHHHHHHHHHTTTCGGGGTTSCCCCEEEEEEGGGTEEEEEECSS
T ss_pred CccEeehhhHHHHHHHHHHhhcCCchHHHHHHHHhHHHHHHHHHHhhccCcccccCCcccccccccccccceeEEecCCc
Confidence 58999999999999999999999999999999999999999999999988877777778899999999999999999999
Q ss_pred CCCHHHHHHHHhHhhhcCchhHHHHHhcCCCCccccccccchhheeeecceEEEEEecCCCceEEEEEccCceEEEEeCC
Q 045760 85 GMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDT 164 (700)
Q Consensus 85 GMt~~dl~~~l~tIa~S~~~~f~~~~~~~~~~~~IG~FGIGf~S~F~vadkv~V~Sk~~~~~~~~w~s~~~~~~~i~~~~ 164 (700)
|||+++|.++|++||+||+++|++++....+.++|||||||||||||||++|+|+||+.+..++.|.+.+++.+......
T Consensus 82 GMt~~~~~~~l~~ia~S~~~~~~~~~~~~~~~~~IGqFGIGfyS~Fmvad~v~V~trs~~~~~~~~~~~~~~~~~~~~~~ 161 (213)
T d2iwxa1 82 GMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDE 161 (213)
T ss_dssp CCCHHHHHHHHTTCCCSTHHHHHHHHHHTCCGGGGGGGTCGGGGGGGTEEEEEEEEECTTSCCEEEEECSSSEEEEEECS
T ss_pred cccHHHHHHHHhhhhcccchHHHhhhhhhhhhhhhcccccchhhhhhhccceeEEeecCCcccceeeEecCCCcEEEEEe
Confidence 99999999999999999999999888766678899999999999999999999999997766777777766666655433
Q ss_pred CCCCCCCceEEEEEeccchhhhccHHHHHHHHHHHhCCCCcceEEeee
Q 045760 165 SGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIE 212 (700)
Q Consensus 165 ~~~~~~~GT~I~L~lk~~~~e~l~~~~i~~ii~~ys~~l~~PI~l~~~ 212 (700)
......+||+|+|||+++..+|++.++|+++|++||+|++|||+|+.+
T Consensus 162 ~~~~~~~GT~I~L~lk~d~~efle~~rlk~iIkkYS~fI~~PI~l~~e 209 (213)
T d2iwxa1 162 VNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVT 209 (213)
T ss_dssp SSCCCSSEEEEEEEECTTCGGGGCHHHHHHHHHHHCCCCSSCEEECCC
T ss_pred ccCCCCCcEEEEEEeCccHHHhcCHHHHHHHHHHHhcCcCcCeEEccc
Confidence 335678999999999999999999999999999999999999999864
No 4
>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=7e-56 Score=443.33 Aligned_cols=207 Identities=78% Similarity=1.187 Sum_probs=190.4
Q ss_pred ccccchhhhHHHHHHHHHHcCCCCchhHHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCCC
Q 045760 5 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGI 84 (700)
Q Consensus 5 ~e~~~Fq~e~~~ll~ll~~~LYs~~~iflRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGi 84 (700)
.|+|+||+|+++||+||+++|||||++|||||||||+|||+++|++.++.+......+++.|+|.+|.++++|+|+|||+
T Consensus 1 ~e~~~Fq~e~~~ll~ll~~slYs~~~iflRELIqNa~DA~~k~~~~~~~~~~~~~~~~~~~i~i~~d~~~~~l~I~DnGi 80 (208)
T d1uyla_ 1 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGI 80 (208)
T ss_dssp CEEEECCHHHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGTTCCCCCEEEEEETTTTEEEEEECSC
T ss_pred CcceeehHHHHHHHHHHHHhhcCCchHhHHHHHhhHHHHHHHHHHHhcCCchhccCCcccceEEeecCCccEEEEEcCCc
Confidence 37899999999999999999999999999999999999999999999888877777788899999999999999999999
Q ss_pred CCCHHHHHHHHhHhhhcCchhHHHHHhcCCCCccccccccchhheeeecceEEEEEecCCCceEEEEEccCceEEEEeCC
Q 045760 85 GMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDT 164 (700)
Q Consensus 85 GMt~~dl~~~l~tIa~S~~~~f~~~~~~~~~~~~IG~FGIGf~S~F~vadkv~V~Sk~~~~~~~~w~s~~~~~~~i~~~~ 164 (700)
|||++++.++|++||+||+++|.+++..+.+.++|||||||||||||||++|+|.|++.++.++.|.+.+++.|.+...+
T Consensus 81 GMt~~el~~~LgtIa~Sg~~~f~~~~~~~~~~~~IGqFGVGFyS~FmVad~v~V~sk~~~~~~~~~~~~~~~~~~~~~~~ 160 (208)
T d1uyla_ 81 GMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT 160 (208)
T ss_dssp CCCHHHHHTGGGSCHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGGGGTEEEEEEEEECTTSCCEEEEECSTTEEEEEECC
T ss_pred cccHHHHHhhcccccccchHHHHHhhhhccchhhhhhcccceEEeeeccCceEEEEecCCcchheeeeccCCCceEEecc
Confidence 99999999999999999999999988766778899999999999999999999999987777788888888777776532
Q ss_pred CCCCCCCceEEEEEeccchhhhccHHHHHHHHHHHhCCCCcceEEeee
Q 045760 165 SGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIE 212 (700)
Q Consensus 165 ~~~~~~~GT~I~L~lk~~~~e~l~~~~i~~ii~~ys~~l~~PI~l~~~ 212 (700)
.....+||+|+||++++..+|++.++|+++|++||+|++|||+++++
T Consensus 161 -~~~~~~GT~I~L~lk~d~~efl~~~~i~~likkys~fi~~PI~l~~e 207 (208)
T d1uyla_ 161 -GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVE 207 (208)
T ss_dssp -SSCCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHCTTCSSCEEECCC
T ss_pred -cccCCCCcEEEEEeCCChHHHcCHHHHHHHHHHHhcccCcCeEeccc
Confidence 34568999999999999999999999999999999999999999753
No 5
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]}
Probab=99.98 E-value=5.6e-33 Score=251.54 Aligned_cols=114 Identities=25% Similarity=0.455 Sum_probs=104.6
Q ss_pred HHHHHHHHHhCCcccEEEEeecCCCCCEEEEeCCCcccHHHHHHHHHHhcccCcccccCCCCceEEeCCCChHHHHHHHh
Q 045760 542 GLCKVIKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKR 621 (700)
Q Consensus 542 ~L~~~lk~~L~~kV~~V~vS~RL~~sPa~lv~~e~g~s~~Mer~mk~q~~~~~~~~~~~~~k~iLEINp~HplIkkL~~~ 621 (700)
.|++|+|++||++|++|++|+||++||||||++++|+|++|+|||++|++ .++..+|||||||+||||++|.+.
T Consensus 1 sl~~~~K~~L~d~V~~V~~S~RL~~sP~~lv~~~~~~s~~M~kimk~~~~------~~~~~k~iLEiNp~H~lIk~l~~~ 74 (115)
T d1sf8a_ 1 SFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQ------KVPEVKYIFELNPDHVLVKRAADT 74 (115)
T ss_dssp CHHHHHHHHHGGGSSEEEECCCCSSCCEEEECCTTSCCHHHHHHHHTTTS------CCCCCCCEEEECTTSHHHHHHHHC
T ss_pred CHHHHHHHHhcCcccEEeeccccccCceeeecCCcchHHHHHHHHHHhcc------ccccccceeeeCCCCHHHHHHHhc
Confidence 38999999999999999999999999999999999999999999999854 345679999999999999999763
Q ss_pred hccCCCchhHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q 045760 622 ADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLK 665 (700)
Q Consensus 622 ~~~d~~~~~~~~~~~~Lyd~AlL~~G~~i~dp~~f~~ri~~ll~ 665 (700)
.+++.++++++||||+|+|++|+.++||+.|++|+|+||.
T Consensus 75 ----~~~~~~~~~~~~L~d~A~l~~G~~l~Dp~~f~~ri~~ll~ 114 (115)
T d1sf8a_ 75 ----EDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLV 114 (115)
T ss_dssp ----CSHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHH
T ss_pred ----cchHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHh
Confidence 2467789999999999999999999999999999999985
No 6
>d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=7.9e-15 Score=144.44 Aligned_cols=152 Identities=17% Similarity=0.145 Sum_probs=101.9
Q ss_pred CCCchhHHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEE-cCCCCEEEEEeCCCCCCHHHHHHHHhHhhhcCch
Q 045760 26 YSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIP-DKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTK 104 (700)
Q Consensus 26 Ys~~~iflRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~-d~~~~~l~I~DnGiGMt~~dl~~~l~tIa~S~~~ 104 (700)
.+++..+|||||+||+||.++ .|.|.+ +.+...|+|.|||.||+++||...+...+.|...
T Consensus 4 i~~~~~~v~ELi~NsiDA~At------------------~I~i~i~~~g~~~i~V~DnG~Gi~~~dl~~~~~~~~tsk~~ 65 (203)
T d1h7sa2 4 VLSLSTAVKELVENSLDAGAT------------------NIDLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQ 65 (203)
T ss_dssp ECCHHHHHHHHHHHHHHTTCS------------------EEEEEEEGGGTSEEEEEECSCCCCGGGSGGGGC--------
T ss_pred EecHHHHHHHHHHHHHcCCCC------------------EEEEEEEcCCEEEEEEeeCCcccCHHHhhhhhhheeecccc
Confidence 467889999999999999752 566666 3344689999999999999999777776665432
Q ss_pred hHHHHHhcCCCCccccccccchhheeeecceEEEEEecC-CCceEEEEEccC-ceEEEEeCCCCCCCCCceEEEEE-ec-
Q 045760 105 EFMEALAAGADVSMIGQFGVGFYSAYLVAEKVIVTAKHN-DDEQYIWESQAG-GSFTVTRDTSGELLGRGTKITLH-LK- 180 (700)
Q Consensus 105 ~f~~~~~~~~~~~~IG~FGIGf~S~F~vadkv~V~Sk~~-~~~~~~w~s~~~-~~~~i~~~~~~~~~~~GT~I~L~-lk- 180 (700)
. ..+.......|..|.|++|.-.++ +++|+|+.. +..++.+..+.+ ....+.+. ...+||+|++. |.
T Consensus 66 ~----~~~~~~~~t~GfrGeaL~si~~~s-~~~i~s~~~~~~~~~~i~~~~~g~~~~~~~~----~~~~GTtV~v~~LF~ 136 (203)
T d1h7sa2 66 E----FADLTQVETFGFRGEALSSLCALS-DVTISTCHASAKVGTRLMFDHNGKIIQKTPY----PRPRGTTVSVQQLFS 136 (203)
T ss_dssp ------CCTTCSEEESSSSSHHHHHHHHS-EEEEEEECTTCSSCEEEEECTTSCEEEEEEC----CCCSEEEEEEESTTT
T ss_pred c----ccccccccccCccchhhhhhhhcc-ceEEEeecCCCchhEEEEEeccCceeeeeec----ccccceEEEeehhhh
Confidence 1 111123556799999988877776 599999975 455787776544 34455553 35789999997 32
Q ss_pred --cchhh-hc-----cHHHHHHHHHHHhCCCC
Q 045760 181 --EDQLE-YL-----EERRLKDLIKKHSEFIS 204 (700)
Q Consensus 181 --~~~~e-~l-----~~~~i~~ii~~ys~~l~ 204 (700)
+-++. |+ +..++.+++++|+-..|
T Consensus 137 n~PvRrk~f~k~~~~e~~~i~~~l~~~al~~p 168 (203)
T d1h7sa2 137 TLPVRHKEFQRNIKKEYAKMVQVLHAYCIISA 168 (203)
T ss_dssp TSHHHHHHHHHTHHHHHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHhccchHHHHHHHHHHHHHHHhcCC
Confidence 22222 33 34668888999987543
No 7
>d1b63a2 d.122.1.2 (A:-2-216) DNA mismatch repair protein MutL {Escherichia coli [TaxId: 562]}
Probab=99.45 E-value=2.1e-13 Score=135.59 Aligned_cols=156 Identities=21% Similarity=0.256 Sum_probs=110.7
Q ss_pred HHcCCCCchhHHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCC-CEEEEEeCCCCCCHHHHHHHHhHhhh
Q 045760 22 INTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTN-NSLSIIDSGIGMTKADLVNNLGTIAR 100 (700)
Q Consensus 22 ~~~LYs~~~iflRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~-~~l~I~DnGiGMt~~dl~~~l~tIa~ 100 (700)
+.....+|..+|+|||+||+||.++ .|.|.++.++ ..|.|.|||.||+++|+.......++
T Consensus 18 ag~vi~~~~~~vkELveNsiDA~At------------------~I~V~i~~~g~~~i~V~DnG~Gi~~~d~~~~~~r~~T 79 (218)
T d1b63a2 18 AGEVVERPASVVKELVENSLDAGAT------------------RIDIDIERGGAKLIRIRDNGCGIKKDELALALARHAT 79 (218)
T ss_dssp HHHHCSSHHHHHHHHHHHHHHTTCS------------------EEEEEEEGGGTSEEEEEECSCCCCGGGHHHHHSTTCC
T ss_pred CcCEEecHHHHHHHHHhhhhcCCCC------------------EEEEEEEcCCccEEEEeeCCCCcCHHHHHhhHhcccc
Confidence 3667789999999999999999863 5777775444 57999999999999999987777777
Q ss_pred cCchhHHHHHhcCCCCccccccccchhheeeecceEEEEEecCC-CceEEEEEccCc-eEEEEeCCCCCCCCCceEEEEE
Q 045760 101 SGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVIVTAKHND-DEQYIWESQAGG-SFTVTRDTSGELLGRGTKITLH 178 (700)
Q Consensus 101 S~~~~f~~~~~~~~~~~~IG~FGIGf~S~F~vadkv~V~Sk~~~-~~~~~w~s~~~~-~~~i~~~~~~~~~~~GT~I~L~ 178 (700)
|--..| +.+. .....|..|-+++|.-.++ +++|+|+..+ ..+|....++++ ...+.+. ...+||+|++.
T Consensus 80 SKi~~~-~dl~---~~~t~GFRGEAL~Si~~vs-~l~I~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~GTtV~V~ 150 (218)
T d1b63a2 80 SKIASL-DDLE---AIISLGFRGEALASISSVS-RLTLTSRTAEQQEAWQAYAEGRDMNVTVKPA----AHPVGTTLEVL 150 (218)
T ss_dssp SSCCSH-HHHH---TCCSSCCSSCHHHHHHTTS-EEEEEEECTTCSSEEEEEEETTTTEEEEEEE----CCCSEEEEEEE
T ss_pred ccccch-hhcc---hhhhhccchhHHHHhhhcC-ceEEeeecCCCCceEEEEEEeccccceeeec----ccCCccEEEEE
Confidence 643332 1222 2456899999988877775 4999999753 456666655443 3445542 35789999997
Q ss_pred -ec---cchhhhc-----cHHHHHHHHHHHhCCCC
Q 045760 179 -LK---EDQLEYL-----EERRLKDLIKKHSEFIS 204 (700)
Q Consensus 179 -lk---~~~~e~l-----~~~~i~~ii~~ys~~l~ 204 (700)
|- +-++.|+ +..++..++.+|+-..|
T Consensus 151 ~LF~n~PvRrk~lks~~~e~~~i~~~v~~~AL~~p 185 (218)
T d1b63a2 151 DLFYNTPARRKFLRTEKTEFNHIDEIIRRIALARF 185 (218)
T ss_dssp STTTTCHHHHHTCCCHHHHHHHHHHHHHHHHHHCT
T ss_pred eeEecchHHHHhhCChHHHHHHHHHHHHHHhhcCC
Confidence 32 2234454 34568889999976544
No 8
>d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]}
Probab=99.36 E-value=9.4e-13 Score=130.71 Aligned_cols=153 Identities=23% Similarity=0.345 Sum_probs=100.4
Q ss_pred hHHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEE-cCCC--CEEEEEeCCCCCCHHHHHHHHhHhhhcCchhHH
Q 045760 31 IFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIP-DKTN--NSLSIIDSGIGMTKADLVNNLGTIARSGTKEFM 107 (700)
Q Consensus 31 iflRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~-d~~~--~~l~I~DnGiGMt~~dl~~~l~tIa~S~~~~f~ 107 (700)
.+|||||+||+||++..+. ...+.|.|.. +.+. ..|+|.|||+||+++++...+...++|.+.
T Consensus 25 ~~l~eLi~Naida~~~~~~-----------~~~i~i~i~~~~~~~~~~~i~V~DnG~Gi~~~~~~~~f~~~~~s~~~--- 90 (219)
T d2hkja3 25 QTVRELIENSLDATDVHGI-----------LPNIKITIDLIDDARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSSKY--- 90 (219)
T ss_dssp HHHHHHHHHHHHTTGGGTC-----------CCEEEEEEEEEETTTTEEEEEEEECSCCCCGGGHHHHHHCCCSSCCC---
T ss_pred HHHHHHHHHHHHHHHhCCC-----------cceEEEEEEEecCCCCEEEEEEEcCCCCCCHHHHHhhccceEecccc---
Confidence 3799999999999975332 1234444443 2222 368999999999999999888777766432
Q ss_pred HHHhcCCCCccccccccchhheeeec-----ceEEEEEecC-CCceEEEEEccC---ceEE-EEeCC-CCCCCCCceEEE
Q 045760 108 EALAAGADVSMIGQFGVGFYSAYLVA-----EKVIVTAKHN-DDEQYIWESQAG---GSFT-VTRDT-SGELLGRGTKIT 176 (700)
Q Consensus 108 ~~~~~~~~~~~IG~FGIGf~S~F~va-----dkv~V~Sk~~-~~~~~~w~s~~~---~~~~-i~~~~-~~~~~~~GT~I~ 176 (700)
......|.+|+|+.++.+++ ..+.|.|+.. +...+.|....+ .... ..... ......+||.|+
T Consensus 91 ------~~~~~~G~~GlGl~~~~~~s~~~~g~~i~V~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~~~~~~~~vr 164 (219)
T d2hkja3 91 ------VNRQTRGMYGLGVKAAVLYSQMHQDKPIEIETSPVNSKRIYTFKLKIDINKNEPIIVERGSVENTRGFHGTSVA 164 (219)
T ss_dssp ------CCSCCSCSCTTTHHHHHHHHHHHCCCCEEEEEECTTCSEEEEEEEEEETTTTEEEEEEEEEEECCTTCCEEEEE
T ss_pred ------ccccccCccCHHHHHHHHHHHHcCCcEEEEEEEecCCCcEEEEeeccceeeeeeecCCCcEEEEecCCccccee
Confidence 23457899999999887765 4699999975 455677765432 1111 11100 013356899999
Q ss_pred EEeccchhhhccHHHHHHHHHHHhCCCCc
Q 045760 177 LHLKEDQLEYLEERRLKDLIKKHSEFISY 205 (700)
Q Consensus 177 L~lk~~~~e~l~~~~i~~ii~~ys~~l~~ 205 (700)
+.+..+.. -....+.+++++|+-.-|.
T Consensus 165 ~~~~~~~~--~~~~~i~~~l~~~al~~P~ 191 (219)
T d2hkja3 165 ISIPGDWP--KAKSRIYEYIKRTYIITPY 191 (219)
T ss_dssp EEEECCHH--HHHHHHHHHHHHHHHHCTT
T ss_pred EEecccHH--HHHHHHHHHHHHHHhhCCC
Confidence 88665432 2345688889988764443
No 9
>d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.16 E-value=1e-05 Score=80.19 Aligned_cols=159 Identities=14% Similarity=0.155 Sum_probs=95.5
Q ss_pred HHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCCCCCCHHH--------HHHHHhHhhhcCc
Q 045760 32 FLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKAD--------LVNNLGTIARSGT 103 (700)
Q Consensus 32 flRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGiGMt~~d--------l~~~l~tIa~S~~ 103 (700)
.+-|+|.||+|...+ ++ ..-.|.|.++.+++.|+|.|||.||+-+- +.-.|+....||+
T Consensus 57 i~dEil~Na~D~~~r-------~~------~~~~I~v~i~~~~~si~V~d~GrGIPv~~h~~~~~~~~e~ift~l~ag~n 123 (239)
T d1pvga2 57 IFDEILVNAADNKVR-------DP------SMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSN 123 (239)
T ss_dssp HHHHHHHHHHHHHHH-------CT------TCCEEEEEEETTTTEEEEEEESSCCCCSBCTTTCSBHHHHHHHSSSEESC
T ss_pred ecceeeecccchhhh-------cc------ccceEEEEEeCCCCEEEEEecCcceeeeeccccccchhheeeEeeccccc
Confidence 567999999997542 11 12368888888889999999999997642 2223333333333
Q ss_pred hhHHHHHhcCCCCccccccccchhheeeecceEEEEEec-CCCceEEEEEccC----ceEEEEeCCCCCCCCCceEEEEE
Q 045760 104 KEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVIVTAKH-NDDEQYIWESQAG----GSFTVTRDTSGELLGRGTKITLH 178 (700)
Q Consensus 104 ~~f~~~~~~~~~~~~IG~FGIGf~S~F~vadkv~V~Sk~-~~~~~~~w~s~~~----~~~~i~~~~~~~~~~~GT~I~L~ 178 (700)
-+ ........|..|+|...+-+++++++|.+.. .+...|.+....+ ..-.+... .....||+|+..
T Consensus 124 fd------~~~~k~sgGlnGvG~~vvNalS~~f~vev~~~~~g~~~~q~~~~g~~~~~~~~i~~~---~~~~~gT~ItF~ 194 (239)
T d1pvga2 124 YD------DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSY---KKGPSYTKVTFK 194 (239)
T ss_dssp CC------TTSCCCCSCCSSCHHHHHHHTEEEEEEEEEETTTTEEEEEEEETTTTEECCCEEEEC---CSSCCEEEEEEE
T ss_pred cc------cccceeeCCeeccceeehhhhhHhhheeeEEeecCceEEEEeeCCcccccccccccc---ccCCCceEEEEE
Confidence 11 1112346799999999999999999988864 3334444333221 11223331 334679998876
Q ss_pred eccchhh--hccHHHHHHHHHHHhCC---C-CcceEEeee
Q 045760 179 LKEDQLE--YLEERRLKDLIKKHSEF---I-SYPISLWIE 212 (700)
Q Consensus 179 lk~~~~e--~l~~~~i~~ii~~ys~~---l-~~PI~l~~~ 212 (700)
....... -++.+.+..+.++.+.. + ...|+++++
T Consensus 195 PD~~iF~~~~~~~d~l~~~~rr~~~La~~~~~v~V~~Ng~ 234 (239)
T d1pvga2 195 PDLTRFGMKELDNDILGVMRRRVYDINGSVRDINVYLNGK 234 (239)
T ss_dssp ECGGGGTCSSCCHHHHHHHHHHHHHHHHHSTTCEEEETTE
T ss_pred eCHHHhCCceeCHHHHHHHHHHHHHHhCCCCceEEEECCE
Confidence 5543211 13555565555554332 2 366777653
No 10
>d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]}
Probab=98.09 E-value=1.1e-05 Score=78.50 Aligned_cols=159 Identities=15% Similarity=0.164 Sum_probs=97.5
Q ss_pred hHHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCCCCCCHHH--------HHHHHhHhhhcC
Q 045760 31 IFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKAD--------LVNNLGTIARSG 102 (700)
Q Consensus 31 iflRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGiGMt~~d--------l~~~l~tIa~S~ 102 (700)
-.+.|+|.||+|-... . ..-.|.|.++. ++.|+|.|||.||+-+- +.-.|+....||
T Consensus 29 ~l~~Eil~Na~De~~~-~-------------~~~~i~v~~~~-dg~i~V~ddG~GIpv~~h~~~~~~~~e~if~~l~~~~ 93 (212)
T d1kija2 29 HLFKEILDNAVDEALA-G-------------YATEILVRLNE-DGSLTVEDNGRGIPVDLMPEEGKPAVEVIYNTLHSGG 93 (212)
T ss_dssp HHHHHHHHHHHHHHHT-T-------------SCCEEEEEECT-TSCEEEEECSSCCCCSEETTTTEEHHHHHHHSSCEES
T ss_pred hhhhhhhhhhhhhhhh-c-------------CCceEEEEEcC-CCcEEEEECCcccccccccccCcceEEEEEEEEcccc
Confidence 3578999999997531 1 12356666664 46899999999988642 222344444444
Q ss_pred chhHHHHHhcCCCCccccccccchhheeeecceEEEEEecCCCceEEEEEccCc-eEEEEeCCCCCCCCCceEEEEEecc
Q 045760 103 TKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVIVTAKHNDDEQYIWESQAGG-SFTVTRDTSGELLGRGTKITLHLKE 181 (700)
Q Consensus 103 ~~~f~~~~~~~~~~~~IG~FGIGf~S~F~vadkv~V~Sk~~~~~~~~w~s~~~~-~~~i~~~~~~~~~~~GT~I~L~lk~ 181 (700)
+-+ .......-|..|+|...+-.++.+++|+++..+ ..+.+....+. .-.+...........||+|+.....
T Consensus 94 ~~d------~~~~~~sgG~hGvGa~vvNalS~~~~v~v~r~~-k~~~~~f~~g~~~~~~~~~~~~~~~~~GT~ItF~PD~ 166 (212)
T d1kija2 94 KFE------QGAYKVSGGLHGVGASVVNALSEWTVVEVFREG-KHHRIAFSRGEVTEPLRVVGEAPRGKTGTRVTFKPDP 166 (212)
T ss_dssp GGG------GSSCCCCSCSSTTSHHHHHHTEEEEEEEEEETT-EEEEEEEETTEEEEEEEEEEECGGGCCEEEEEEEECH
T ss_pred ccc------CCCceecCCCccccceEEEEeccceEEEEEEec-ceeeeEEeccccCCcceEccccCCCCccEEEEEEEcc
Confidence 422 122345679999999999999999999998643 33443332221 1111111111234679999987654
Q ss_pred chh--hhccHHHHHHHHHHHhCCCC-cceEEee
Q 045760 182 DQL--EYLEERRLKDLIKKHSEFIS-YPISLWI 211 (700)
Q Consensus 182 ~~~--e~l~~~~i~~ii~~ys~~l~-~PI~l~~ 211 (700)
... .-++.+.|...++..+-..+ .-|++++
T Consensus 167 ~iF~~~~~d~~~l~~rl~~~A~L~~Gl~I~~~D 199 (212)
T d1kija2 167 EIFGNLRFDPSKIRARLREVAYLVAGLKLVFQD 199 (212)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred ccccccEECHHHHHHHHHHHhccCCCCEEEEEe
Confidence 321 12467778888877664443 6677765
No 11
>d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]}
Probab=97.87 E-value=3.1e-05 Score=75.69 Aligned_cols=155 Identities=19% Similarity=0.191 Sum_probs=94.9
Q ss_pred hHHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCCCCCCHHH--------HHHHHhHhhhcC
Q 045760 31 IFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKAD--------LVNNLGTIARSG 102 (700)
Q Consensus 31 iflRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGiGMt~~d--------l~~~l~tIa~S~ 102 (700)
-.+-|+|.||+|-... . ..-.|.|.+..+ ..|+|.|||-||+-+- +.-.|+++-.||
T Consensus 37 ~l~~Eil~Na~De~~~-------~-------~~~~i~v~i~~d-gsIsV~ddGrGIPv~~h~~~~~~~~e~if~~l~tg~ 101 (219)
T d1ei1a2 37 HMVFEVVDNAIDEALA-------G-------HCKEIIVTIHAD-NSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGG 101 (219)
T ss_dssp HHHHHHHHHHHHHHHT-------T-------CCCEEEEEECTT-SCEEEEECSSCCCCSBCTTTSSBHHHHHHHSTTEES
T ss_pred hhhHhHhhhhhhhhcC-------C-------CccceeEEEcCC-CeEEEEECCccccccccCccCCchhhhhhhhhhhcc
Confidence 4678999999997531 1 123566666644 6799999999998763 454566655555
Q ss_pred chhHHHHHhcCCCCccccccccchhheeeecceEEEEEecCCCceE--EEEEccC--ceEEEEeCCCCCCCCCceEEEEE
Q 045760 103 TKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVIVTAKHNDDEQY--IWESQAG--GSFTVTRDTSGELLGRGTKITLH 178 (700)
Q Consensus 103 ~~~f~~~~~~~~~~~~IG~FGIGf~S~F~vadkv~V~Sk~~~~~~~--~w~s~~~--~~~~i~~~~~~~~~~~GT~I~L~ 178 (700)
+-+ .....-..|..|+|...+-.++++++|.++..+ ..| .|+ .|. ..-.+. +....+||+|+..
T Consensus 102 ~fd------~~~~~~sgG~nGvG~~~~NalS~~f~v~~~r~g-~~y~q~f~-~g~~~~~~~~~----~~~~~~gT~I~F~ 169 (219)
T d1ei1a2 102 KFD------DNSYKVSGGLHGVGVSVVNALSQKLELVIQREG-KIHRQIYE-HGVPQAPLAVT----GETEKTGTMVRFW 169 (219)
T ss_dssp CSS------SSSCSSCSCCSSCHHHHHHHTEEEEEEEEEETT-EEEEEEEE-TTEESSCCEEE----EECSCCEEEEEEE
T ss_pred CCC------CCcceeEcCccccceeEEEEeeeEEEEEEEECC-EEEEEEEe-CCeECCCceec----cCcCCCCEEEEEE
Confidence 421 112244679999999999999999999988643 222 232 221 111111 1234689999887
Q ss_pred eccchh-hh--ccHHHHHHHHHHHhCCCC-cceEEeee
Q 045760 179 LKEDQL-EY--LEERRLKDLIKKHSEFIS-YPISLWIE 212 (700)
Q Consensus 179 lk~~~~-e~--l~~~~i~~ii~~ys~~l~-~PI~l~~~ 212 (700)
...... .. .+...|..-++..+-..+ .-|.++++
T Consensus 170 PD~~iF~~~~~~~~~~l~~R~~dlA~L~~Gl~V~lnde 207 (219)
T d1ei1a2 170 PSLETFTNVTEFEYEILAKRLRELSFLDSGVSIRLRDK 207 (219)
T ss_dssp ECTTTCCSCCSCCHHHHHHHHHHHHHHSTTCEEEEEET
T ss_pred ECccccCCcccccHHHHHHHHHHHcccCCCcEEEEEEc
Confidence 654321 11 234556655655553333 66677653
No 12
>d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]}
Probab=97.79 E-value=7.2e-06 Score=78.37 Aligned_cols=115 Identities=22% Similarity=0.238 Sum_probs=66.6
Q ss_pred hHHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCCCCCCHHHHHHHHhHhhhcCchhHHHHH
Q 045760 31 IFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 110 (700)
Q Consensus 31 iflRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGiGMt~~dl~~~l~tIa~S~~~~f~~~~ 110 (700)
-+|..||.||++|..+..... ...+.+.|.+..+.+.-.|+|.|||.||+++++.+.|... .+++..- .
T Consensus 63 qvl~NLl~NA~~~~~~~~~~~-------~~~~~I~v~~~~~~~~~~i~V~D~G~GI~~~~~~~iF~~f-~~~~~~~--~- 131 (190)
T d1jm6a2 63 HMLFELFKNAMRATVESHESS-------LTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYM-YSTAPTP--Q- 131 (190)
T ss_dssp HHHHHHHHHHHHHHHHHCSCT-------TSCCCEEEEEEECSSEEEEEEEECSCCCCGGGTTGGGCTT-CCCSCCC----
T ss_pred HHHHHHHHHHHHHhhccCccc-------cccceEEEEEEeCCeEEEEEEeccCCCCCHHHHHHHhCcc-eecCCcC--c-
Confidence 367899999999986432111 1123455666555555679999999999999988544332 2222110 0
Q ss_pred hcCCCCccccccccchhheeeecceEEEEEecCCCceEEEEEccCceEEEEeCCCCCCCCCceEEEEEec
Q 045760 111 AAGADVSMIGQFGVGFYSAYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLK 180 (700)
Q Consensus 111 ~~~~~~~~IG~FGIGf~S~F~vadkv~V~Sk~~~~~~~~w~s~~~~~~~i~~~~~~~~~~~GT~I~L~lk 180 (700)
.+......+.+|+|++-|-.+++. + +|...+.. ..+.||+++++|.
T Consensus 132 -~~~~~~~~~G~GLGL~i~k~ive~------h------------gG~I~v~s-----~~g~Gt~f~i~lP 177 (190)
T d1jm6a2 132 -PGTGGTPLAGFGYGLPISRLYAKY------F------------QGDLQLFS-----MEGFGTDAVIYLK 177 (190)
T ss_dssp ---------CCSSCHHHHHHHHHHH------T------------TCEEEEEE-----ETTTEEEEEEEEE
T ss_pred -CcccccccCCCCccHHHHHHHHHH------C------------CCEEEEEe-----cCCCceEEEEEEe
Confidence 001123457899999887666531 1 12333332 1357899988875
No 13
>d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.79 E-value=7.1e-06 Score=78.10 Aligned_cols=119 Identities=24% Similarity=0.343 Sum_probs=65.9
Q ss_pred HHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCCCCCCHHHHHHHHhHhhhcCchhHHH---
Q 045760 32 FLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFME--- 108 (700)
Q Consensus 32 flRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGiGMt~~dl~~~l~tIa~S~~~~f~~--- 108 (700)
+|..||.||++|..+.... .....+.+.|++..+.+.-.|+|.|||.||+.+++.+.|-. ..+.+..-..
T Consensus 57 vl~NLl~NAi~~t~~~~~~------~~~~~~~I~i~~~~~~~~v~i~V~D~G~GI~~e~~~~iF~~-f~tt~~~~~~~~~ 129 (193)
T d1gkza2 57 ILPELLKNAMRATMESHLD------TPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMDY-HFTTAEASTQDPR 129 (193)
T ss_dssp HHHHHHHHHHHHHHHTCTT------CTTSCCCEEEEEEECSSEEEEEEECCSCCCCTTTTTTTTST-TCCCC--------
T ss_pred HHHHHHHHHHHhcccCcee------eccccceEEEEEEccCCEEEEEEecCCCCCCHHHHHHhcCC-ceecccccccccc
Confidence 6789999999998642110 00112334555544444556899999999999998854432 3332221000
Q ss_pred --------HHhcCCCCccccccccchhheeeecceEEEEEecCCCceEEEEEccCceEEEEeCCCCCCCCCceEEEEEec
Q 045760 109 --------ALAAGADVSMIGQFGVGFYSAYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLK 180 (700)
Q Consensus 109 --------~~~~~~~~~~IG~FGIGf~S~F~vadkv~V~Sk~~~~~~~~w~s~~~~~~~i~~~~~~~~~~~GT~I~L~lk 180 (700)
....+.....++-.|+|+.-|-.+++. + +|...+... .+.||+++|+|.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~G~GlGL~i~k~ive~------~------------gG~i~v~S~-----~g~Gt~f~l~L~ 186 (193)
T d1gkza2 130 ISPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEY------L------------GGSLQLQSL-----QGIGTDVYLRLR 186 (193)
T ss_dssp -----------------CCSCSSCHHHHHHHHHHH------T------------TCEEEEEEE-----TTTEEEEEEEEE
T ss_pred cccccccccccccccccccccCCcCHHHHHHHHHH------C------------CCEEEEEec-----CCCceEEEEEEC
Confidence 000011223455689999776655432 1 234444331 367999999885
No 14
>d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]}
Probab=97.60 E-value=1.9e-05 Score=72.23 Aligned_cols=73 Identities=15% Similarity=0.084 Sum_probs=48.6
Q ss_pred HHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCCCCCCHHHHHHHHhHhhhcCchhHHHHHh
Q 045760 32 FLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 111 (700)
Q Consensus 32 flRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGiGMt~~dl~~~l~tIa~S~~~~f~~~~~ 111 (700)
++.-||.||+.+.. ..+.|.+....+.-.|+|.|||.||+.+++...+...-+..
T Consensus 48 vl~NLl~NAik~~~----------------~~i~i~~~~~~~~~~i~V~D~G~Gi~~~~~~~iF~~F~r~~--------- 102 (146)
T d1id0a_ 48 VMGNVLDNACKYCL----------------EFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVD--------- 102 (146)
T ss_dssp HHHHHHHHHHHHCS----------------SEEEEEEEECSSCEEEEEEESSSCCCGGGTTGGGSCCCCTT---------
T ss_pred HHHHHHHHHHHhhc----------------CCEEEEEEeeCCEEEEEEEeeCCCCCHHHHHHHcCCcccCC---------
Confidence 56679999998853 12456666665566799999999999999885443321111
Q ss_pred cCCCCccccccccchhheeeecc
Q 045760 112 AGADVSMIGQFGVGFYSAYLVAE 134 (700)
Q Consensus 112 ~~~~~~~IG~FGIGf~S~F~vad 134 (700)
.. -+..|+|++-|-.+++
T Consensus 103 --~~---~~G~GLGL~I~k~iv~ 120 (146)
T d1id0a_ 103 --TL---RPGQGVGLAVAREITE 120 (146)
T ss_dssp --CC---CTTCCSCHHHHHHHHH
T ss_pred --CC---CCCeeHHHHHHHHHHH
Confidence 11 1347999987766654
No 15
>d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]}
Probab=97.57 E-value=1.7e-05 Score=73.54 Aligned_cols=80 Identities=18% Similarity=0.255 Sum_probs=48.0
Q ss_pred HHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEE--cCCCCEEEEEeCCCCCCHHHHHHHHhHhhhcCchhHHHH
Q 045760 32 FLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIP--DKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEA 109 (700)
Q Consensus 32 flRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~--d~~~~~l~I~DnGiGMt~~dl~~~l~tIa~S~~~~f~~~ 109 (700)
+|.-||+||+.+... ......|.|.. ..+.-.|+|.|||+||+++++.+.|....+....
T Consensus 53 vl~NLi~NAik~t~~-------------~~~~~~i~i~~~~~~~~~~i~V~D~G~GI~~~~~~~iF~~F~~~~~~----- 114 (161)
T d2c2aa2 53 VLLNLLNNGVKYSKK-------------DAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSS----- 114 (161)
T ss_dssp HHHHHHHHHHHTCCT-------------TCTTCEEEEEEEEETTEEEEEEEECSSCCCGGGTTGGGSTTCCCC-------
T ss_pred HHHHHHHHHHHhhhc-------------CCCcceeeEEEEecCCEEEEEEEEcCCCCCHHHHHHhhCCcEEcCCC-----
Confidence 677899999988631 11223455554 3344569999999999999998655443322110
Q ss_pred HhcCCCCccccccccchhheeeecc
Q 045760 110 LAAGADVSMIGQFGVGFYSAYLVAE 134 (700)
Q Consensus 110 ~~~~~~~~~IG~FGIGf~S~F~vad 134 (700)
.....+-.|+|++-|-.+++
T Consensus 115 -----~~~~~~G~GLGL~i~k~iv~ 134 (161)
T d2c2aa2 115 -----LTYEVPGTGLGLAITKEIVE 134 (161)
T ss_dssp ------------CCCTHHHHHHHHH
T ss_pred -----CCCCCCcccHHHHHHHHHHH
Confidence 11223456999987766644
No 16
>d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.44 E-value=7.7e-05 Score=64.76 Aligned_cols=56 Identities=23% Similarity=0.230 Sum_probs=37.5
Q ss_pred HHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCCCCCCHHHHHH
Q 045760 32 FLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVN 93 (700)
Q Consensus 32 flRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGiGMt~~dl~~ 93 (700)
++..||+||++|........ ....+.+.|.+....+.-.|+|.|||.||+++++.+
T Consensus 68 vl~NLl~NAi~~~~~~~~~~------~~~~~~I~i~~~~~~~~v~i~V~D~G~GI~~e~~~~ 123 (125)
T d1y8oa2 68 MLFELFKNSMRATVELYEDR------KEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDR 123 (125)
T ss_dssp HHHHHHHHHHHHHHHHHTTC------SSCCCCEEEEEEECSSEEEEEEEECSCCCCHHHHGG
T ss_pred HHHHHHHHHHHhhhcccccc------CCCceeEEEEeecCCCEEEEEEEEeCCCcCHHHHcc
Confidence 67899999999986532110 011233444444444445689999999999998864
No 17
>d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]}
Probab=97.41 E-value=2.5e-05 Score=72.56 Aligned_cols=74 Identities=11% Similarity=0.148 Sum_probs=47.2
Q ss_pred HHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCCCCCCHHHHHHHHhHhhhcCchhHHHHHh
Q 045760 32 FLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 111 (700)
Q Consensus 32 flRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGiGMt~~dl~~~l~tIa~S~~~~f~~~~~ 111 (700)
+|.-||+||+.+.. ..+.|.+..+.+...|+|.|||+||+++++.+.|....+..
T Consensus 51 vl~NLi~NAik~~~----------------~~i~i~~~~~~~~~~i~V~D~G~GI~~e~~~~iF~~F~r~~--------- 105 (161)
T d1bxda_ 51 AVANMVVNAARYGN----------------GWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGD--------- 105 (161)
T ss_dssp HHHHHHHHHHTTCC----------------SCEEEEEEEETTEEEEEEEEESSCSCTTGGGCSSCCCCCCS---------
T ss_pred HHHHHHHHHHHhCC----------------CeEEEEEEEeCCEEEEEEEEcCCCCCHHHHHHHhCCceECC---------
Confidence 56788888876531 23566665665556799999999999998885443322211
Q ss_pred cCCCCccccccccchhheeeec
Q 045760 112 AGADVSMIGQFGVGFYSAYLVA 133 (700)
Q Consensus 112 ~~~~~~~IG~FGIGf~S~F~va 133 (700)
.....|..|+|++-|=.++
T Consensus 106 ---~~~~~~g~GLGL~ivk~iv 124 (161)
T d1bxda_ 106 ---SARTISGTGLGLAIVQRIV 124 (161)
T ss_dssp ---CCCCCCCCSCCCCTTHHHH
T ss_pred ---CCCcCCCCCchHHHHHHHH
Confidence 1122466899997554443
No 18
>d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.37 E-value=6.7e-05 Score=68.51 Aligned_cols=75 Identities=15% Similarity=0.193 Sum_probs=41.8
Q ss_pred HHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCCCCCCHHHHHHHHhHhhhcCchhHHHHHh
Q 045760 32 FLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 111 (700)
Q Consensus 32 flRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGiGMt~~dl~~~l~tIa~S~~~~f~~~~~ 111 (700)
+|.-||+||+.+.. ...+.|.+....+.-.|+|.|||+||+.+++.+.|...-++.+
T Consensus 48 vl~NLl~NAiky~~---------------~~~I~i~~~~~~~~~~i~V~D~G~Gi~~~~~~~ife~f~r~~~-------- 104 (148)
T d1ysra1 48 AVDNAIANAVKHGG---------------ATLVQLSAVSSRAGVEIAIDDNGSGVPEGERQVVFERFSRGST-------- 104 (148)
T ss_dssp HHHHHHHHHHHTTC---------------CSEEEEEEEEETTEEEEEEEESSSCCCGGGHHHHHTSCC------------
T ss_pred HHHHHHHHHHHhcC---------------CcEEEEEEEecCCEEEEEEEEcCCCCCHHHHHHhcCccccCCC--------
Confidence 66778888875531 1223444444444456999999999999999866544322111
Q ss_pred cCCCCccccccccchhheeeecc
Q 045760 112 AGADVSMIGQFGVGFYSAYLVAE 134 (700)
Q Consensus 112 ~~~~~~~IG~FGIGf~S~F~vad 134 (700)
..-+..|+|++-|-.+++
T Consensus 105 -----~~~~G~GLGL~i~~~iv~ 122 (148)
T d1ysra1 105 -----ASHSGSGLGLALVAQQAQ 122 (148)
T ss_dssp ------------CCCHHHHHHHH
T ss_pred -----CCCCCccHHHHHHHHHHH
Confidence 011345999876555443
No 19
>d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.23 E-value=0.00017 Score=64.98 Aligned_cols=85 Identities=18% Similarity=0.241 Sum_probs=50.1
Q ss_pred hHHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCCCCCCHHHHHHHHhHhhhcCchhHHHHH
Q 045760 31 IFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 110 (700)
Q Consensus 31 iflRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGiGMt~~dl~~~l~tIa~S~~~~f~~~~ 110 (700)
.+|-||++||+.+.-+ + .....+.|.+..+.+.-.|.|.|||+||+. +...+... .+.
T Consensus 42 ~av~E~v~Nai~ha~~-------~----~~~~~I~i~~~~~~~~l~i~i~D~G~gi~~--~~~~~~~~-~~~-------- 99 (139)
T d1th8a_ 42 TVVSEAVTNAIIHGYN-------N----DPNGIVSISVIIEDGVVHLTVRDEGVGIPD--IEEARQPL-FTT-------- 99 (139)
T ss_dssp HHHHHHHHHHHHTTST-------T----CTTSEEEEEEEEETTEEEEEEEECSSCCSC--HHHHTCCC------------
T ss_pred HHHHHhhhhhhheecC-------C----CCCcEEEEEEEEecCEEEEEEccccccccc--cccccccc-cee--------
Confidence 5899999999986411 0 111234555555655567999999999974 33222110 000
Q ss_pred hcCCCCccccccccchhheeeecceEEEEEec
Q 045760 111 AAGADVSMIGQFGVGFYSAYLVAEKVIVTAKH 142 (700)
Q Consensus 111 ~~~~~~~~IG~FGIGf~S~F~vadkv~V~Sk~ 142 (700)
..-.+.-|+|++-+-.+++++.|.|..
T Consensus 100 -----~~~~~~~GlGL~iv~~l~d~i~i~s~~ 126 (139)
T d1th8a_ 100 -----KPELERSGMGFTIMENFMDEVIVESEV 126 (139)
T ss_dssp ---------CCCSCHHHHHHHHSSEEEEEEET
T ss_pred -----cccCCCchHHHHHHHHhCCEEEEEEcC
Confidence 011123489998777777887777653
No 20
>d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]}
Probab=96.37 E-value=0.0097 Score=55.04 Aligned_cols=146 Identities=18% Similarity=0.199 Sum_probs=83.0
Q ss_pred chhHHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCCCCCCHHHHHHHHhHhhhcCchhHHH
Q 045760 29 KEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFME 108 (700)
Q Consensus 29 ~~iflRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGiGMt~~dl~~~l~tIa~S~~~~f~~ 108 (700)
..-.+.|+|.||+|=.-. + ..-.|.|.+..+ +.++|+|||-||+-+- ....|.... +
T Consensus 6 lhHlv~EivDNsiDEa~a------------G--~~~~I~V~l~~D-~si~V~D~GRGIPvd~-------h~~~~~~~~-e 62 (168)
T d1s14a_ 6 PNHLGQEVIDNSVDEALA------------G--HAKRVDVILHAD-QSLEVIDDGRGMPVDI-------HPEEGVPAV-E 62 (168)
T ss_dssp THHHHHHHHHHHHHHHHT------------T--SCSEEEEEECTT-SCEEEEECSSCCCCSB-------CTTTCSBHH-H
T ss_pred CceEEeeeeecHHHHHHc------------C--CCCEEEEEEeCC-CeEEEEEEecccceee-------eccCCCchh-h
Confidence 345789999999996431 1 123677777654 6799999999999531 112222211 0
Q ss_pred HHhcCCCCccccccccchhheeeecceEEEEEecCCCceEEEEEccCce-EEEEeCCCCCCCCCceEEEEEeccch--hh
Q 045760 109 ALAAGADVSMIGQFGVGFYSAYLVAEKVIVTAKHNDDEQYIWESQAGGS-FTVTRDTSGELLGRGTKITLHLKEDQ--LE 185 (700)
Q Consensus 109 ~~~~~~~~~~IG~FGIGf~S~F~vadkv~V~Sk~~~~~~~~w~s~~~~~-~~i~~~~~~~~~~~GT~I~L~lk~~~--~e 185 (700)
. -||+ --+=.++.+++|.+++.+ ..|..+-..+.. -.+...........||+|+....+.- ..
T Consensus 63 ---------~--v~t~--SVVNALS~~l~v~v~RdG-k~~~q~f~~G~~~~~l~~~~~~~~~~tGT~I~F~PD~~IF~~~ 128 (168)
T d1s14a_ 63 ---------L--ILCI--SVVNALSKRVEVNVRRDG-QVYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPDETFFDSP 128 (168)
T ss_dssp ---------H--HHHT--SHHHHHEEEEEEEEEETT-EEEEEEEETTEEEEEEEEEEECCTTCCEEEEEEEECGGGSSCC
T ss_pred ---------c--cCce--eEeeeccCeEEEEEEECC-EEEEEEECCCccCCcccceeecccCCCcEEEEEeeccceeccc
Confidence 0 0111 112345788889887643 344444333211 11211111123467999998765432 11
Q ss_pred hccHHHHHHHHHHHhCCC-CcceEEee
Q 045760 186 YLEERRLKDLIKKHSEFI-SYPISLWI 211 (700)
Q Consensus 186 ~l~~~~i~~ii~~ys~~l-~~PI~l~~ 211 (700)
-++...|.+.++.++-.- ..-|.+.+
T Consensus 129 ~f~~~~l~~rlre~AfLn~GL~I~l~D 155 (168)
T d1s14a_ 129 RFSVSRLTHVLKAKAVLCPGVEITFKD 155 (168)
T ss_dssp SCCHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred cccHHHHHHHHHHHhhcCCCCEEEEEE
Confidence 347788999998887655 36666654
No 21
>d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]}
Probab=95.96 E-value=0.0012 Score=59.17 Aligned_cols=52 Identities=13% Similarity=0.149 Sum_probs=34.9
Q ss_pred HHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEc--CCCCEEEEEeCCCCCCHHHHHHHH
Q 045760 32 FLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPD--KTNNSLSIIDSGIGMTKADLVNNL 95 (700)
Q Consensus 32 flRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d--~~~~~l~I~DnGiGMt~~dl~~~l 95 (700)
++.-||.||.+|..+ .+.....|+|.+. .+.-.|+|.|||.||+++.+.+.|
T Consensus 101 vl~Nll~NAi~~~~~------------~~~~~~~I~i~~~~~~~~~~i~v~D~G~gi~~e~l~~if 154 (179)
T d1ixma_ 101 LMRKLFHLFDQAVSR------------ESENHLTVSLQTDHPDRQLILYLDFHGAFADPSAFDDIR 154 (179)
T ss_dssp HHHHHHHHHHHHBCT------------TSCCEEEEEEECCCSSSSCEEEEEEESCBSCGGGCC---
T ss_pred HHHHHHHHHHHHhhh------------ccccchhhhhhhcccccEEEEEEEeCCCCcCHHHHHHHH
Confidence 455689999999752 1123345666654 344679999999999999888544
No 22
>d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=95.78 E-value=0.0012 Score=60.24 Aligned_cols=79 Identities=18% Similarity=0.161 Sum_probs=34.7
Q ss_pred HHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEE----cCCCCEEEEEeCCCCCCHHHHHHHHhHhhhcCchhHH
Q 045760 32 FLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIP----DKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFM 107 (700)
Q Consensus 32 flRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~----d~~~~~l~I~DnGiGMt~~dl~~~l~tIa~S~~~~f~ 107 (700)
+|.-||.||++|...-.-... ........+.. +...-.|.|.|||.||+.+++.+.+-. ..|++
T Consensus 48 vl~NLl~NA~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~v~D~G~Gi~~~~~~~iF~p-f~s~k---- 115 (156)
T d1r62a_ 48 VLLNIVRNALQALGPEGGEII-------LRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTLFYP-MVSGR---- 115 (156)
T ss_dssp HHHHHHHHHHHHHGGGCEEEE-------EEEEEEEEEEETTEEEEEEEEEEEEEECTTC---------------------
T ss_pred HHHHHHHHHHHhhhcCCCcee-------eeccccceeeeccccCCceEEEEEecCCCCCCHHHHHhhccc-ceecC----
Confidence 667899999999863110000 00001112222 112245899999999999999865432 22221
Q ss_pred HHHhcCCCCccccccccchhheeeec
Q 045760 108 EALAAGADVSMIGQFGVGFYSAYLVA 133 (700)
Q Consensus 108 ~~~~~~~~~~~IG~FGIGf~S~F~va 133 (700)
-+..|+|++-|-.++
T Consensus 116 -----------~~G~GLGL~i~~~iv 130 (156)
T d1r62a_ 116 -----------EGGTGLGLSIARNLI 130 (156)
T ss_dssp ---------------CHHHHHHHHHH
T ss_pred -----------CCCCCchHHHHHHHH
Confidence 124589998776664
No 23
>d1j20a2 d.210.1.1 (A:171-395) Argininosuccinate synthetase, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=24.97 E-value=35 Score=31.68 Aligned_cols=40 Identities=23% Similarity=0.457 Sum_probs=31.6
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCCCHHHHHHHHhHhhhcCchhHHHHHhcCCCCccccccccch
Q 045760 64 LFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGF 126 (700)
Q Consensus 64 ~~I~I~~d~~~~~l~I~DnGiGMt~~dl~~~l~tIa~S~~~~f~~~~~~~~~~~~IG~FGIGf 126 (700)
-.|.|.+.. +.-+.| ||.=|+.-++...|..|| |+.|||+
T Consensus 44 e~v~I~F~~-G~Pv~i--ng~~~~~~~li~~LN~i~--------------------g~~GIGR 83 (225)
T d1j20a2 44 EYVEVEFFE-GDPVAV--NGERLSPAALLQRLNEIG--------------------GRHGVGR 83 (225)
T ss_dssp EEEEEEEET-TEEEEE--TTEECCHHHHHHHHHHHH--------------------HHTTCCE
T ss_pred EEEEEEEee-eEEEEE--CCccCCHHHHHHHHHHHh--------------------hhceEee
Confidence 457777764 345566 999999999999988877 7889998
Done!