BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045763
(267 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The
Xyloglucan Nonasaccharide Xllg.
pdb|1UMZ|B Chain B, Xyloglucan Endotransglycosylase In Complex With The
Xyloglucan Nonasaccharide Xllg.
pdb|1UN1|A Chain A, Xyloglucan Endotransglycosylase Native Structure.
pdb|1UN1|B Chain B, Xyloglucan Endotransglycosylase Native Structure
Length = 278
Score = 268 bits (684), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/256 (52%), Positives = 169/256 (66%), Gaps = 12/256 (4%)
Query: 15 KIHDNGKVLTLNLDKSGGSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKGANWD 74
K + G + L+LDK G+GFQSK YLFG M++KLVPG SAGTVTA+YLSS+ + D
Sbjct: 31 KYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHD 90
Query: 75 EIDFEFLGNVTGEPYTLHTNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNPKRVIFYAD 134
EIDFEFLGN TG+PY L TNVF+ G GDRE++ +LWFDPT +FH YS+LWN ++F D
Sbjct: 91 EIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVD 150
Query: 135 DVPIREFKNLEYLGIPFPKKQPMRIYSSLWNADSWATQGGRIKIDWKYAPFTASYSNFTA 194
DVPIR FKN + LG+ FP QPM+IYSSLWNAD WAT+GG K DW APF ASY +F
Sbjct: 151 DVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHI 210
Query: 195 DACIWAFGASSCDTNSPYSNSNSKTKVWLRHE---LDIAKKRKMRWVEKNHMVYDYCKDH 251
D C + A C T + W + E LD + R++ WV + + +Y+YC D
Sbjct: 211 DGCEASVEAKFCATQG--------ARWWDQKEFQDLDAFQYRRLSWVRQKYTIYNYCTDR 262
Query: 252 KRFPHGPPLECSVDNN 267
R+P PP EC D +
Sbjct: 263 SRYPSMPP-ECKRDRD 277
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant
Xyloglucanase Isoform Nxg1-Delta-Yniig
pdb|2UWB|B Chain B, Crystal Structure Of The Nasturtium Seedling Mutant
Xyloglucanase Isoform Nxg1-Delta-Yniig
Length = 267
Score = 203 bits (517), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 108/249 (43%), Positives = 145/249 (58%), Gaps = 22/249 (8%)
Query: 10 WGHGAKIHDNGKVLTLNLDKSGGSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSK 69
WG + D G LT+ LD + GSGF+S Y G IKL GY+AG +T++YLS+
Sbjct: 28 WGPQHQRVDQGS-LTIWLDSTSGSGFKSINRYRSGYFGANIKLQSGYTAGVITSFYLSNN 86
Query: 70 G---ANWDEIDFEFLGNVTGEPYTLHTNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNP 126
DEID EFLG + G+PYTL TNVF +G+GDRE + HLWFDPT D+H Y+I W P
Sbjct: 87 QDYPGKHDEIDIEFLGTIPGKPYTLQTNVFIEGSGDREMRIHLWFDPTQDYHNYAIYWTP 146
Query: 127 KRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWNADSWATQGGRIKIDWKYAPFT 186
+IF+ DDVPIR + P +P+ +Y S+W+A SWAT+ G+ K D++Y PF
Sbjct: 147 SEIIFFVDDVPIRRYPRKSDATFPL---RPLWVYGSVWDASSWATENGKYKADYRYQPFV 203
Query: 187 ASYSNFTADACIWAFGASSCD--TNSPYSNSNSKTKVWLRHELDIAKKRKMRWVEKNHMV 244
Y +F +C ASSC+ + SPY +L + M WV+KN+MV
Sbjct: 204 GKYEDFKLGSCT-VEAASSCNPASVSPYG------------QLSQQQVAAMEWVQKNYMV 250
Query: 245 YDYCKDHKR 253
Y+YC D R
Sbjct: 251 YNYCDDPTR 259
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg,
A Xyloglucan Derived Oligosaccharide
pdb|2VH9|B Chain B, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg,
A Xyloglucan Derived Oligosaccharide
Length = 290
Score = 203 bits (517), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 108/249 (43%), Positives = 145/249 (58%), Gaps = 22/249 (8%)
Query: 10 WGHGAKIHDNGKVLTLNLDKSGGSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSK 69
WG + D G LT+ LD + GSGF+S Y G IKL GY+AG +T++YLS+
Sbjct: 51 WGPQHQRVDQGS-LTIWLDSTSGSGFKSINRYRSGYFGANIKLQSGYTAGVITSFYLSNN 109
Query: 70 G---ANWDEIDFEFLGNVTGEPYTLHTNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNP 126
DEID EFLG + G+PYTL TNVF +G+GDRE + HLWFDPT D+H Y+I W P
Sbjct: 110 QDYPGKHDEIDIEFLGTIPGKPYTLQTNVFIEGSGDREMRIHLWFDPTQDYHNYAIYWTP 169
Query: 127 KRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWNADSWATQGGRIKIDWKYAPFT 186
+IF+ DDVPIR + P +P+ +Y S+W+A SWAT+ G+ K D++Y PF
Sbjct: 170 SEIIFFVDDVPIRRYPRKSDATFPL---RPLWVYGSVWDASSWATENGKYKADYRYQPFV 226
Query: 187 ASYSNFTADACIWAFGASSCD--TNSPYSNSNSKTKVWLRHELDIAKKRKMRWVEKNHMV 244
Y +F +C ASSC+ + SPY +L + M WV+KN+MV
Sbjct: 227 GKYEDFKLGSCT-VEAASSCNPASVSPYG------------QLSQQQVAAMEWVQKNYMV 273
Query: 245 YDYCKDHKR 253
Y+YC D R
Sbjct: 274 YNYCDDPTR 282
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase
Isoform Nxg2
pdb|2UWC|B Chain B, Crystal Structure Of Nasturtium Xyloglucan Hydrolase
Isoform Nxg2
Length = 271
Score = 198 bits (504), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/254 (42%), Positives = 145/254 (57%), Gaps = 27/254 (10%)
Query: 10 WGHGAKIHDNGKVLTLNLDKSGGSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSK 69
WG + D G LT+ LD + GSGF+S Y G IKL GY+AG +T++YLS+
Sbjct: 27 WGPQHQRVDQGS-LTIWLDSTSGSGFKSINRYRSGYFGANIKLQSGYTAGVITSFYLSNN 85
Query: 70 G---ANWDEIDFEFLGNVTGEPYTLHTNVFSQGNGD-----RERQFHLWFDPTTDFHTYS 121
DEID EFLG + G+PYTL TNVF +G+GD RE + HLWFDPT D+H Y+
Sbjct: 86 QDYPGKHDEIDIEFLGTIPGKPYTLQTNVFIEGSGDYNIIGRELRIHLWFDPTQDYHNYA 145
Query: 122 ILWNPKRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWNADSWATQGGRIKIDWK 181
I W P +IF+ DDVPIR + P +PM +Y S+W+A SWAT+ G+ K D++
Sbjct: 146 IYWTPSEIIFFVDDVPIRRYPRKSDATFPL---RPMWVYGSVWDASSWATENGKYKADYR 202
Query: 182 YAPFTASYSNFTADACIWAFGASSCD--TNSPYSNSNSKTKVWLRHELDIAKKRKMRWVE 239
Y PF Y +F +C ASSC+ + SPY +L + M WV+
Sbjct: 203 YQPFVGKYEDFKLGSCT-VEAASSCNPASVSPYG------------QLSQQQVAAMEWVQ 249
Query: 240 KNHMVYDYCKDHKR 253
KN+MVY+YC D R
Sbjct: 250 KNYMVYNYCDDPTR 263
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase
Isoform Nxg1
pdb|2UWA|B Chain B, Crystal Structure Of The Nasturtium Seedling Xyloglucanase
Isoform Nxg1
pdb|2UWA|C Chain C, Crystal Structure Of The Nasturtium Seedling Xyloglucanase
Isoform Nxg1
Length = 274
Score = 197 bits (501), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 145/254 (57%), Gaps = 27/254 (10%)
Query: 10 WGHGAKIHDNGKVLTLNLDKSGGSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSK 69
WG + D G LT+ LD + GSGF+S Y G IKL GY+AG +T++YLS+
Sbjct: 30 WGPQHQRVDQGS-LTIWLDSTSGSGFKSINRYRSGYFGANIKLQSGYTAGVITSFYLSNN 88
Query: 70 G---ANWDEIDFEFLGNVTGEPYTLHTNVFSQGNGD-----RERQFHLWFDPTTDFHTYS 121
DEID EFLG + G+PYTL TNVF +G+GD RE + HLWFDPT D+H Y+
Sbjct: 89 QDYPGKHDEIDIEFLGTIPGKPYTLQTNVFIEGSGDYNIIGREMRIHLWFDPTQDYHNYA 148
Query: 122 ILWNPKRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWNADSWATQGGRIKIDWK 181
I W P +IF+ DDVPIR + P +P+ +Y S+W+A SWAT+ G+ K D++
Sbjct: 149 IYWTPSEIIFFVDDVPIRRYPRKSDATFPL---RPLWVYGSVWDASSWATENGKYKADYR 205
Query: 182 YAPFTASYSNFTADACIWAFGASSCD--TNSPYSNSNSKTKVWLRHELDIAKKRKMRWVE 239
Y PF Y +F +C ASSC+ + SPY +L + M WV+
Sbjct: 206 YQPFVGKYEDFKLGSCT-VEAASSCNPASVSPYG------------QLSQQQVAAMEWVQ 252
Query: 240 KNHMVYDYCKDHKR 253
KN+MVY+YC D R
Sbjct: 253 KNYMVYNYCDDPTR 266
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase
Protein From Bacillus Licheniformis
pdb|3D6E|B Chain B, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase
Protein From Bacillus Licheniformis
Length = 201
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 18/148 (12%)
Query: 28 DKSGGSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSS---KGANWDEIDFEFLGNV 84
+K G G QS + Y +G ++ +K P + G V+A+Y S+ G WDEID EFLG
Sbjct: 44 NKFDGGGNQSVQTYGYGLYEVNMK--PAKNVGIVSAFYTSTGPTDGTPWDEIDIEFLGKD 101
Query: 85 TGEPYTLHTNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNL 144
T + + N ++ G G+ E+ +L FD +HTY+ W P + +Y D + K+
Sbjct: 102 TTK---VQFNYYTNGVGNHEKIVNLGFDAANSYHTYAFDWQPNSIKWYVDG----QLKHT 154
Query: 145 EYLGIPFPKKQPMRIYSSLW---NADSW 169
IP + P +IY SLW D W
Sbjct: 155 ATTQIP---QTPGKIYMSLWAGAGVDEW 179
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of
Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase
pdb|1MAC|B Chain B, Crystal Structure And Site-Directed Mutagenesis Of
Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase
Length = 212
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 16/167 (9%)
Query: 6 FEITWGHGAKIHDNGKVLTLNLDKSGGSGF---QSKKEYLFGKIDMRIKLVPGYSAGTVT 62
F TW N L L L S + F + + ++G + + P + G V+
Sbjct: 28 FNCTWRANNVNFTNDGKLKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMKPAKNTGIVS 87
Query: 63 AYYL---SSKGANWDEIDFEFLGNVTGEPYTLHTNVFSQGNGDRERQFHLWFDPTTDFHT 119
+++ + G WDEID EFLG T + + N ++ G G E+ L FD + FHT
Sbjct: 88 SFFTYTGPAHGTQWDEIDIEFLGKDTTK---VQFNYYTNGVGGHEKVISLGFDASKGFHT 144
Query: 120 YSILWNPKRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWNA 166
Y+ W P + +Y D V K+ IP P +I +LWN
Sbjct: 145 YAFDWQPGYIKWYVDGV----LKHTATANIP---STPGKIMMNLWNG 184
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1
pdb|1AXK|B Chain B, Engineered Bacillus Bifunctional Enzyme Gluxyn-1
Length = 394
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 35 FQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYL---SSKGANWDEIDFEFLGNVTGEPYTL 91
++S Y +G ++ +K P + G V++++ + G WDEID EFLG T + +
Sbjct: 6 YRSTNIYGYGLYEVSMK--PAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTK---V 60
Query: 92 HTNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGIPF 151
N ++ G G E+ L FD + FHTY+ W P + +Y D V K+ IP
Sbjct: 61 QFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV----LKHTATANIP- 115
Query: 152 PKKQPMRIYSSLWNA 166
P +I +LWN
Sbjct: 116 --STPGKIMMNLWNG 128
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus
(1-3,1-4)- Beta-Glucanase
pdb|1GLH|A Chain A, Cation Binding To A Bacillus (1,3-1,4)-Beta-Glucanase.
Geometry, Affinity And Effect On Protein Stability
pdb|2AYH|A Chain A, Crystal And Molecular Structure At 1.6 Angstroms
Resolution Of The Hybrid Bacillus
Endo-1,3-1,4-Beta-D-Glucan 4- Glucanohydrolase H(A16-M)
Length = 214
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 16/167 (9%)
Query: 6 FEITWGHGAKIHDNGKVLTLNLDKSGGSGF---QSKKEYLFGKIDMRIKLVPGYSAGTVT 62
F TW N L L L S + F + + ++G + + P + G V+
Sbjct: 30 FNCTWRANNVNFTNDGKLKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMKPAKNTGIVS 89
Query: 63 AYYL---SSKGANWDEIDFEFLGNVTGEPYTLHTNVFSQGNGDRERQFHLWFDPTTDFHT 119
+++ + G WDEID EFLG T + + N ++ G G E+ L FD + FHT
Sbjct: 90 SFFTYTGPAHGTQWDEIDIEFLGKDTTK---VQFNYYTNGVGGHEKVISLGFDASKGFHT 146
Query: 120 YSILWNPKRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWNA 166
Y+ W P + +Y D V K+ IP P +I +LWN
Sbjct: 147 YAFDWQPGYIKWYVDGV----LKHTATANIP---STPGKIMMNLWNG 186
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted
Jellyroll Protein Shown By Crystal Structure Analysis
Length = 214
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 35 FQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYL---SSKGANWDEIDFEFLGNVTGEPYTL 91
++S Y +G ++ +K P + G V++++ + G WDEID EFLG T + +
Sbjct: 6 YRSTNIYGYGLYEVSMK--PAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTK---V 60
Query: 92 HTNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGIPF 151
N ++ G G E+ L FD + FHTY+ W P + +Y D V K+ IP
Sbjct: 61 QFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV----LKHTATANIP- 115
Query: 152 PKKQPMRIYSSLWNA 166
P +I +LWN
Sbjct: 116 --STPGKIMMNLWNG 128
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted
Jellyroll Protein Shown By Crystal Structure Analysis
Length = 208
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 35 FQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYL---SSKGANWDEIDFEFLGNVTGEPYTL 91
++S Y +G ++ +K P + G V++++ + G WDEID EFLG T + +
Sbjct: 6 YRSTNIYGYGLYEVSMK--PAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTK---V 60
Query: 92 HTNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGIPF 151
N ++ G G E+ L FD + FHTY+ W P + +Y D V K+ IP
Sbjct: 61 QFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV----LKHTATANIP- 115
Query: 152 PKKQPMRIYSSLWNA 166
P +I +LWN
Sbjct: 116 --STPGKIMMNLWNG 128
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From
Bacillus Subtilis (Strain 168)
Length = 238
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 18/140 (12%)
Query: 36 QSKKEYLFGKIDMRIKLVPGYSAGTVTAYYL---SSKGANWDEIDFEFLGNVTGEPYTLH 92
+S + Y +G ++R+K P + G V++++ + G WDEID EFLG T + +
Sbjct: 89 RSVQTYGYGLYEVRMK--PAKNTGIVSSFFTYTGPTDGTPWDEIDIEFLGKDTTK---VQ 143
Query: 93 TNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGIPFP 152
N ++ G G+ E+ L FD +HTY+ W P + +Y D + K+ IP
Sbjct: 144 FNYYTNGAGNHEKIVDLGFDAANAYHTYAFDWQPNSIKWYVDG----QLKHTATNQIP-- 197
Query: 153 KKQPMRIYSSLWNA---DSW 169
P +I +LWN D W
Sbjct: 198 -TTPGKIMMNLWNGTGVDEW 216
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase
Length = 214
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 18/140 (12%)
Query: 36 QSKKEYLFGKIDMRIKLVPGYSAGTVTAYYL---SSKGANWDEIDFEFLGNVTGEPYTLH 92
+S + Y +G ++ +K P + G V++++ + G WDEID EFLG T + +
Sbjct: 65 RSVQTYGYGLYEVNMK--PAKNVGIVSSFFTYTGPTDGTPWDEIDIEFLGKDTTK---VQ 119
Query: 93 TNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGIPFP 152
N ++ G G+ E+ +L FD +HTY+ W P + +Y D + K+ IP
Sbjct: 120 FNYYTNGVGNHEKIVNLGFDAANSYHTYAFDWQPNSIKWYVDG----QLKHTATTQIP-- 173
Query: 153 KKQPMRIYSSLWNA---DSW 169
+ P +I +LWN D W
Sbjct: 174 -QTPGKIMMNLWNGAGVDEW 192
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered
Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With
Beta-Glucan Tetrasaccharide
pdb|1U0A|B Chain B, Crystal Structure Of The Engineered
Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With
Beta-Glucan Tetrasaccharide
pdb|1U0A|C Chain C, Crystal Structure Of The Engineered
Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With
Beta-Glucan Tetrasaccharide
pdb|1U0A|D Chain D, Crystal Structure Of The Engineered
Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With
Beta-Glucan Tetrasaccharide
Length = 214
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 16/167 (9%)
Query: 6 FEITWGHGAKIHDNGKVLTLNLDKSGGSGF---QSKKEYLFGKIDMRIKLVPGYSAGTVT 62
F TW N L L L S + F + + ++G + + P + G V+
Sbjct: 30 FNCTWRANNVNFTNDGKLKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMKPAKNTGIVS 89
Query: 63 AYYL---SSKGANWDEIDFEFLGNVTGEPYTLHTNVFSQGNGDRERQFHLWFDPTTDFHT 119
+++ + G WD+ID +FLG T + + N ++ G G E+ L FD + FHT
Sbjct: 90 SFFTYTGPAHGTQWDQIDIQFLGKDTTK---VQFNYYTNGVGGHEKVISLGFDASKGFHT 146
Query: 120 YSILWNPKRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWNA 166
Y+ W P + +Y D V K+ IP P +I +LWN
Sbjct: 147 YAFDWQPGYIKWYVDGV----LKHTATANIP---STPGKIMMNLWNG 186
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4-
Glucanohydrolase Cpa16m-84
pdb|1AJK|B Chain B, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4-
Glucanohydrolase Cpa16m-84
Length = 214
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 68 SKGANWDEIDFEFLGNVTGEPYTLHTNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNPK 127
+ G WDEID EFLG T + + N ++ G G E+ L FD + FHTY+ W P
Sbjct: 15 AHGTQWDEIDIEFLGKDTTK---VQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPG 71
Query: 128 RVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWNA 166
+ +Y D V K+ IP P +I +LWN
Sbjct: 72 YIKWYVDGV----LKHTATANIP---STPGKIMMNLWNG 103
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase
(Lichenase) Derived From A Mouse Hindgut Metagenome
pdb|3I4I|B Chain B, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase
(Lichenase) Derived From A Mouse Hindgut Metagenome
Length = 234
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 18/144 (12%)
Query: 32 GSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSS---KGANWDEIDFEFLGNVTGEP 88
G+ ++++ ++ +G +R+K P + G V++++ + G WDEID EFLG T +
Sbjct: 81 GAEYRTRDKFGYGLYQVRMK--PAKNPGIVSSFFTYTGPVHGTPWDEIDIEFLGKDTTK- 137
Query: 89 YTLHTNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLG 148
+ N ++ G+ E + L FD + DFH Y+ W P + + D + Y
Sbjct: 138 --VQFNYYTNSAGNHEYIYDLRFDASEDFHIYAFNWQPNYIAWLVDGEEVYR----AYDD 191
Query: 149 IPFPKKQPMRIYSSLW---NADSW 169
IP P +I ++W D W
Sbjct: 192 IPV---HPGKIMLNIWPGIGVDEW 212
>pdb|3AXD|A Chain A, The Truncated Fibrobacter Succinogenes
1,3-1,4-Beta-D-Glucanase V18yW203Y IN APO-Form
pdb|3AXD|B Chain B, The Truncated Fibrobacter Succinogenes
1,3-1,4-Beta-D-Glucanase V18yW203Y IN APO-Form
pdb|3AXE|A Chain A, The Truncated Fibrobacter Succinogenes
1,3-1,4-Beta-D-Glucanase V18yW203Y IN COMPLEX WITH
CELLOTETRAOSE (CELLOBIOSE DENSITY WAS Observed)
Length = 249
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 32 GSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKGAN------WDEIDFEFLGNVT 85
G+ + +EY +GK + R+K+ ++GTV++ +L G+ W E+D E LG
Sbjct: 9 GAELYTLEEYQYGKFEARMKMAA--ASGTVSSMFLYQNGSEIADGRPWVEVDIEVLGK-- 64
Query: 86 GEPYTLHTNVFS-QGNGDRERQFHLWFDPTTD--FHTYSILWNPKRVIFYADDVPIREFK 142
P + +N+ + + + + H P D FHTY + W P V + D +R+ +
Sbjct: 65 -SPGSFQSNIITGKAGAQKTSEKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVRKTE 123
Query: 143 NLEYLGIPFPKKQPMRIYSSLWNADSWA 170
+ + Q +R +LW+++S A
Sbjct: 124 GGQVSNL--TGTQGLRF--NLWSSESAA 147
>pdb|3H0O|A Chain A, The Importance Of Ch-Pi Stacking Interactions Between
Carbohydrate And Aromatic Residues In Truncated
Fibrobacter Succinogenes 1,3-1,4-Beta-D-Glucanase
Length = 240
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 18/148 (12%)
Query: 32 GSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKGAN------WDEIDFEFLGNVT 85
G+ + +E +GK + R+K+ ++GTV++ +L G+ W E+D E LG
Sbjct: 6 GAELYTLEEVQYGKFEARMKMAA--ASGTVSSMFLYQNGSEIADGRPWVEVDIEVLGK-- 61
Query: 86 GEPYTLHTNVFS-QGNGDRERQFHLWFDPTTD--FHTYSILWNPKRVIFYADDVPIREFK 142
P + +N+ + + + + H P D FHTY + W P V + D +R+ +
Sbjct: 62 -NPGSFQSNIITGKAGAQKTSEKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVRKTE 120
Query: 143 NLEYLGIPFPKKQPMRIYSSLWNADSWA 170
+ + Q +R +LW+++S A
Sbjct: 121 GGQVSNL--TGTQGLRF--NLWSSESAA 144
>pdb|2R49|A Chain A, Mutational And Structural Studies Of E85i Reveal The
Flexible Loops Of Fibrobacter Succinogenes
1,3-1,4-beta-d- Glucanaseglucanase
Length = 241
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 18/148 (12%)
Query: 32 GSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKGAN------WDEIDFEFLGNVT 85
G+ + +E +GK + R+K+ ++GTV++ +L G+ W E+D E LG
Sbjct: 7 GAELYTLEEVQYGKFEARMKMAA--ASGTVSSMFLYQNGSEIADGRPWVEVDIEVLGK-- 62
Query: 86 GEPYTLHTNVFSQGNGDRERQF-HLWFDPTTD--FHTYSILWNPKRVIFYADDVPIREFK 142
P + +N+ + G ++ H P D FHTY + W P V + D +R+ +
Sbjct: 63 -NPGSFQSNIITGKAGAQKTSIKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVRKTE 121
Query: 143 NLEYLGIPFPKKQPMRIYSSLWNADSWA 170
+ + Q +R +LW+++S A
Sbjct: 122 GGQVSNL--TGTQGLRF--NLWSSESAA 145
>pdb|3HR9|A Chain A, The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta-D-
Glucanase F40i Mutant
Length = 241
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 32 GSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKGAN------WDEIDFEFLGNVT 85
G+ + +E +GK + R+K+ ++GTV++ L G+ W E+D E LG
Sbjct: 7 GAELYTLEEVQYGKFEARMKMAA--ASGTVSSMILYQNGSEIADGRPWVEVDIEVLGK-- 62
Query: 86 GEPYTLHTNVFS-QGNGDRERQFHLWFDPTTD--FHTYSILWNPKRVIFYADDVPIREFK 142
P + +N+ + + + + H P D FHTY + W P V + D +R+ +
Sbjct: 63 -NPGSFQSNIITGKAGAQKTSEKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVRKTE 121
Query: 143 NLEYLGIPFPKKQPMRIYSSLWNADSWA 170
+ + Q +R +LW+++S A
Sbjct: 122 GGQVSNL--TGTQGLRF--NLWSSESAA 145
>pdb|1MVE|A Chain A, Crystal Structure Of A Natural Circularly-Permutated
Jellyroll Protein: 1,3-1,4-Beta-D-Glucanase From
Fibrobacter Succinogenes
Length = 243
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 32 GSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKGAN------WDEIDFEFLGNVT 85
G+ + +E +GK + R K ++GTV++ +L G+ W E+D E LG
Sbjct: 9 GAELYTLEEVQYGKFEARXKXAA--ASGTVSSXFLYQNGSEIADGRPWVEVDIEVLGK-- 64
Query: 86 GEPYTLHTNVFS-QGNGDRERQFHLWFDPTTD--FHTYSILWNPKRVIFYADDVPIREFK 142
P + +N+ + + + + H P D FHTY + W P V + D +R+ +
Sbjct: 65 -NPGSFQSNIITGKAGAQKTSEKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVRKTE 123
Query: 143 NLEYLGIPFPKKQPMRIYSSLWNADSWA 170
+ + Q +R +LW+++S A
Sbjct: 124 GGQVSNL--TGTQGLRF--NLWSSESAA 147
>pdb|1ZM1|A Chain A, Crystal Structures Of Complex F. Succinogenes
1,3-1,4-Beta- D-Glucanase And Beta-1,3-1,4-Cellotriose
pdb|1ZM1|B Chain B, Crystal Structures Of Complex F. Succinogenes
1,3-1,4-Beta- D-Glucanase And Beta-1,3-1,4-Cellotriose
Length = 241
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 32 GSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKGAN------WDEIDFEFLGNVT 85
G+ + +E +GK + R K ++GTV++ +L G+ W E+D E LG
Sbjct: 6 GAELYTLEEVQYGKFEARXKXAA--ASGTVSSXFLYQNGSEIADGRPWVEVDIEVLGK-- 61
Query: 86 GEPYTLHTNVFS-QGNGDRERQFHLWFDPTTD--FHTYSILWNPKRVIFYADDVPIREFK 142
P + +N+ + + + + H P D FHTY + W P V + D +R+ +
Sbjct: 62 -NPGSFQSNIITGKAGAQKTSEKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVRKTE 120
Query: 143 NLEYLGIPFPKKQPMRIYSSLWNADSWA 170
+ + Q +R +LW+++S A
Sbjct: 121 GGQVSNL--TGTQGLRF--NLWSSESAA 144
>pdb|1AJO|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4-
Glucanohydrolase Cpa16m-127
pdb|1AJO|B Chain B, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4-
Glucanohydrolase Cpa16m-127
Length = 214
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 101 GDRERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIY 160
G E+ L FD + FHTY+ W P + +Y D V K+ IP P +I
Sbjct: 2 GGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV----LKHTATANIP---STPGKIM 54
Query: 161 SSLWNA 166
+LWN
Sbjct: 55 MNLWNG 60
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 6 FEITWGHGAKIHDNGKVLTLNLDKSGGSGF---QSKKEYLFGKIDMRIKLVPGYSAGTVT 62
F TW N L L L S + F + + ++G + + P + G V+
Sbjct: 118 FNCTWRANNVNFTNDGKLKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMKPAKNTGIVS 177
Query: 63 AYYL---SSKGANWDEIDFEFLGNVT 85
+++ + G WDEID EFLG T
Sbjct: 178 SFFTYTGPAHGTQWDEIDIEFLGKDT 203
>pdb|2VY0|A Chain A, The X-Ray Structure Of Endo-Beta-1,3-Glucanase From
Pyrococcus Furiosus
pdb|2VY0|B Chain B, The X-Ray Structure Of Endo-Beta-1,3-Glucanase From
Pyrococcus Furiosus
Length = 264
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 46 IDMRIKLVPGYSAGTVTAYYLSSKG------ANWDEID-FEFLGNVTGEPYTLHTNVFSQ 98
++ RIKL G G A+++ N EID EFLG+ EP T+H V
Sbjct: 104 VEARIKLPKG--KGLWPAFWMLGSNIREVGWPNCGEIDIMEFLGH---EPRTIHGTVHGP 158
Query: 99 GNGDRERQFHLWFDP------TTDFHTYSILWNPKRVIFYADDVPIREF--KNLEYLGIP 150
G + + P T DFH + I+W P ++ +Y D E + +E +G
Sbjct: 159 GYSGSKGITRAYTLPEGVPDFTEDFHVFGIVWYPDKIKWYVDGTFYHEVTKEQVEAMGYE 218
Query: 151 FPKKQPMRIYSSLWNADSW 169
+ +P I +L W
Sbjct: 219 WVFDKPFYIILNLAVGGYW 237
>pdb|3ILN|A Chain A, X-Ray Structure Of The Laminarinase From Rhodothermus
Marinus
pdb|3ILN|B Chain B, X-Ray Structure Of The Laminarinase From Rhodothermus
Marinus
Length = 251
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 19/155 (12%)
Query: 36 QSKKEYLFGKIDMRIKLVPGYSAGTVTAYYL-----SSKGANW---DEIDF-EFLG-NVT 85
+ K + +G+ ++R +L G GT A ++ + A W EID E +G N
Sbjct: 78 RGKASWTYGRFEIRARLPSG--RGTWPAIWMLPDRQTYGSAYWPDNGEIDIAEHVGFNPD 135
Query: 86 GEPYTLHTNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLE 145
T+HT ++ G + TDFH Y+I W P+ + ++ DD F N E
Sbjct: 136 VVHGTVHTKAYNHLLGTQRGGSIRVPTARTDFHVYAIEWTPEEIRWFVDDSLYYRFPN-E 194
Query: 146 YLGIP------FPKKQPMRIYSSLWNADSWATQGG 174
L P +P QP + ++ +W Q G
Sbjct: 195 RLTNPEADWRHWPFDQPFHLIMNIAVGGTWGGQQG 229
>pdb|2HYK|A Chain A, The Crystal Structure Of An Endo-Beta-1,3-Glucanase From
Alkaliphilic Nocardiopsis Sp.Strain F96
Length = 245
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 60/132 (45%), Gaps = 15/132 (11%)
Query: 36 QSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKGANW------DEIDFEFLGNVTGEPY 89
Q+K + +G+++ I++ G G A+++ GA++ D + + + N+ EP+
Sbjct: 80 QNKVQPQYGRVEASIQIPRG--QGIWPAFWM--LGADFPNTPWPDSGEIDIMENIGREPH 135
Query: 90 TLHTNVFSQGNGDRERQFHLWFDP-----TTDFHTYSILWNPKRVIFYADDVPIREFKNL 144
+H ++ G E + P FHT+++ W P + + D V + + +
Sbjct: 136 LVHGSLHGPGYFGGEPLTGSYMHPQGWSFADTFHTFAVDWRPGSITWSVDGVAYQTYTSA 195
Query: 145 EYLGIPFPKKQP 156
+ G P+ QP
Sbjct: 196 DTRGNPWVFDQP 207
>pdb|3ATG|A Chain A, Endo-1,3-Beta-Glucanase From Cellulosimicrobium Cellulans
Length = 256
Score = 34.3 bits (77), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 36 QSKKEYLFGKIDMRIKLVPGYSAGTVTAYYL---SSKGANW-DEIDFEFLGNVTGEPYTL 91
Q K + +G+I+ RI++ G G A+++ S G W + + + NV EP+ +
Sbjct: 76 QGKYQPQYGRIEARIQIPRG--QGIWPAFWMLGGSFPGTPWPSSGEIDIMENVGFEPHRV 133
Query: 92 HTNVFSQGNGDRERQFHLWFDP-----TTDFHTYSILWNPKRVIFYAD 134
H V G ++ P FHT+++ W P + ++ D
Sbjct: 134 HGTVHGPGYSGGSGITGMYQHPQGWSFADTFHTFAVDWKPGEITWFVD 181
>pdb|1DYP|A Chain A, 1,3-Alpha-1,4-Beta-D-Galactose-4-Sulfate-3,6-Anhydro-D-
Galactose 4 Galactohydrolase
Length = 271
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 86 GEPYTLHTNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNL 144
G+P F Q N + +HL FDP DFHTY + ++ +Y D + E NL
Sbjct: 164 GKPTWXRPGSFPQTNHN---GYHLPFDPRNDFHTYGVNVTKDKITWYVDGEIVGEKDNL 219
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 33.9 bits (76), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T GG+I I W AP SY FT+ + +W+FG
Sbjct: 204 TYTTSGGKIPIRWT-APEAISYRKFTSASDVWSFG 237
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W AP +Y FT+ + +W++G
Sbjct: 167 AYTTRGGKIPIRWT-APEAIAYRKFTSASDVWSYG 200
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W AP +Y FT+ + +W++G
Sbjct: 173 AYTTRGGKIPIRWT-APEAIAYRKFTSASDVWSYG 206
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W AP +Y FT+ + +W++G
Sbjct: 188 AYTTRGGKIPIRWT-APEAIAYRKFTSASDVWSYG 221
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 30.8 bits (68), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W AP ++ FT+ + +W++G
Sbjct: 181 AYTTRGGKIPIRWT-APEAIAFRKFTSASDVWSYG 214
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 30.8 bits (68), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W +P +Y FT+ + +W++G
Sbjct: 202 AYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYG 235
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGASSCDTNS----PYSNSNSK 218
A QG + I W AP A Y FT + +W+FG + + PY N++
Sbjct: 162 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR 213
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W +P +Y FT+ + +W++G
Sbjct: 204 AYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYG 237
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W +P +Y FT+ + +W++G
Sbjct: 204 AYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYG 237
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W +P +Y FT+ + +W++G
Sbjct: 204 AYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYG 237
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W +P +Y FT+ + +W++G
Sbjct: 204 AYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYG 237
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W +P +Y FT+ + +W++G
Sbjct: 204 AYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYG 237
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W +P +Y FT+ + +W++G
Sbjct: 204 AYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYG 237
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 30.4 bits (67), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W +P +Y FT+ + +W++G
Sbjct: 204 AYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYG 237
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W +P +Y FT+ + +W++G
Sbjct: 204 AYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYG 237
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W +P +Y FT+ + +W++G
Sbjct: 204 AYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYG 237
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W +P +Y FT+ + +W++G
Sbjct: 192 AYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYG 225
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W +P +Y FT+ + +W++G
Sbjct: 175 AYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYG 208
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
++ T+GG+I I W +P +Y FT+ + +W++G
Sbjct: 175 AYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYG 208
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 168 SWATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
++ T GG+I I W AP ++ F++ + +W+FG
Sbjct: 208 AYTTTGGKIPIRWT-APEAIAFRTFSSASDVWSFGV 242
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 168 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 199
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 164 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 195
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 171 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 202
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 171 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 202
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 160 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 191
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 171 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 202
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 161 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 192
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 162 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 193
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 171 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 202
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
+ L + W A QG + I W AP A Y FT + +W+FG
Sbjct: 158 ARLIEDNEWTARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 199
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 171 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 202
>pdb|1UPS|A Chain A, Glcnac[alpha]1-4gal Releasing Endo-[beta]-Galactosidase
From Clostridium Perfringens
pdb|1UPS|B Chain B, Glcnac[alpha]1-4gal Releasing Endo-[beta]-Galactosidase
From Clostridium Perfringens
Length = 420
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 112 DPTTDFHTYSILWNPKRVIFYADD 135
DPT+++H Y++ W P + FY D+
Sbjct: 209 DPTSEYHIYAMEWTPTALKFYYDN 232
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 171 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 202
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 171 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 202
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 338 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 369
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 171 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 202
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 337 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 368
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 337 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 368
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 337 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 368
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A QG + I W AP A Y FT + +W+FG
Sbjct: 420 ARQGAKFPIKWT-APEAALYGRFTIKSDVWSFG 451
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 169 WATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
+ T GG+I + W AP Y FT+ + +W++G
Sbjct: 203 YTTTGGKIPVRWT-APEAIQYRKFTSASDVWSYG 235
>pdb|4DFS|A Chain A, Structure Of The Catalytic Domain Of An
Endo-1,3-Beta-Glucanase (Laminarinase) From Thermotoga
Petrophila Rku-1
pdb|4DFS|B Chain B, Structure Of The Catalytic Domain Of An
Endo-1,3-Beta-Glucanase (Laminarinase) From Thermotoga
Petrophila Rku-1
Length = 267
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Query: 36 QSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKG---ANW---DEID-FEFLGNVTGEP 88
+ K E +GKI++R KL G G A ++ W EID E LG+ T
Sbjct: 97 EGKFEIKYGKIEIRAKLPKG--KGIWPALWMLGNNIGEVGWPTCGEIDIMEMLGHDTRTV 154
Query: 89 Y-TLHTNVFSQGNGDRERQFHL---WFDPTTDFHTYSILWNPKRVIFYAD 134
Y T H +S G +HL D + DFH +SI W+ V +Y D
Sbjct: 155 YGTAHGPGYS-GGASIGVAYHLPEGVPDFSEDFHIFSIEWDEDEVEWYVD 203
>pdb|3AZX|A Chain A, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3AZX|B Chain B, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3AZY|A Chain A, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3AZY|B Chain B, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3AZY|C Chain C, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3AZY|D Chain D, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3AZZ|A Chain A, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Gluconolactone
pdb|3AZZ|B Chain B, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Gluconolactone
pdb|3AZZ|C Chain C, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Gluconolactone
pdb|3AZZ|D Chain D, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Gluconolactone
pdb|3B00|A Chain A, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Cetyltrimethylammonium Bromide
pdb|3B00|B Chain B, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Cetyltrimethylammonium Bromide
pdb|3B00|C Chain C, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Cetyltrimethylammonium Bromide
pdb|3B00|D Chain D, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8 In Complex With
Cetyltrimethylammonium Bromide
pdb|3B01|A Chain A, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3B01|B Chain B, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3B01|C Chain C, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
pdb|3B01|D Chain D, Crystal Structure Of The Laminarinase Catalytic Domain
From Thermotoga Maritima Msb8
Length = 272
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Query: 36 QSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKG---ANW---DEID-FEFLGNVTGEP 88
+ K E +GKI++R KL G G A ++ W EID E LG+ T
Sbjct: 89 EGKFEIKYGKIEIRAKLPKG--KGIWPALWMLGNNIGEVGWPTCGEIDIMEMLGHDTRTV 146
Query: 89 Y-TLHTNVFSQGNGDRERQFHL---WFDPTTDFHTYSILWNPKRVIFYAD 134
Y T H +S G +HL D + DFH +SI W+ V +Y D
Sbjct: 147 YGTAHGPGYS-GGASIGVAYHLPEGVPDFSEDFHIFSIEWDEDEVEWYVD 195
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 160 SRLMTGDTYTAPAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 202
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 159 SRLMTGDTYTAPAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 201
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 165 NADSWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
+A+ A +G + I W AP +Y FT + +W+FG
Sbjct: 161 DAEXTAREGAKFPIKWT-APEAINYGTFTIKSDVWSFG 197
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 404 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 446
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 171 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 213
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 160 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 202
>pdb|2GCU|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana
At1g53580
pdb|2GCU|B Chain B, X-Ray Structure Of Gene Product From Arabidopsis Thaliana
At1g53580
pdb|2GCU|C Chain C, X-Ray Structure Of Gene Product From Arabidopsis Thaliana
At1g53580
pdb|2GCU|D Chain D, X-Ray Structure Of Gene Product From Arabidopsis Thaliana
At1g53580
Length = 245
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 43 FGKIDMRIKLVPGYSAGTVTAYYLSSKGANWDEIDFEFLGN 83
G I + ++ PG++AG VT Y++ +GA+ + F G+
Sbjct: 104 IGDIYLEVRATPGHTAGCVT--YVTGEGADQPQPRMAFTGD 142
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 362 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 404
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 169 WATQGGRIKIDWKY-APFTASYSNFTADACIWAFGASSCDT----NSPYSN-SNSKTK 220
+A GG ++ K+ AP +Y +++++ +W+FG +T SPY N SN +T+
Sbjct: 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR 325
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 160 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 202
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 171 TQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
T GG+I I W AP ++ F++ + +W+FG
Sbjct: 211 TTGGKIPIRWT-APEAIAFRTFSSASDVWSFGV 242
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 163 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 158 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 200
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 163 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 158 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 200
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 158 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 200
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 158 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 200
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 163 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 205
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 163 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 205
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 177 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNTFSIKSDVWAFGV 219
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 365 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 407
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 158 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 200
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 162 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 204
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 158 SRLMTGDTYTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 200
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D++ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 156 SRLMTGDTFTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 198
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 170 ATQGGRIKIDWKY-APFTASYSNFTADACIWAFGASSCDT----NSPYSN-SNSKTK 220
A GG ++ K+ AP +Y +++++ +W+FG +T SPY N SN +T+
Sbjct: 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR 325
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 173 GGRIKIDWKYAPFTASYSNFTADACIWAFG 202
GG+I I W AP Y FT+ + +W++G
Sbjct: 173 GGKIPIRWT-APEAIQYRKFTSASDVWSYG 201
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 173 GGRIKIDWKYAPFTASYSNFTADACIWAFG 202
GG+I I W AP Y FT+ + +W++G
Sbjct: 199 GGKIPIRWT-APEAIQYRKFTSASDVWSYG 227
>pdb|1OLQ|A Chain A, The Trichoderma Reesei Cel12a P201c Mutant, Structure At
1.7 A Resolution
pdb|1OLQ|B Chain B, The Trichoderma Reesei Cel12a P201c Mutant, Structure At
1.7 A Resolution
Length = 218
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 138 IREFKNLEYLGIPFPKKQPMRIYSSLWNADSWATQGGRIKIDWKYAPFTAS 188
++ ++N + I P+K+ + SS+ SW+ G I+ + Y FTA+
Sbjct: 57 VKSYQNSQ---IAIPQKRTVNSISSMPTTASWSYSGSNIRANVAYDLFTAA 104
>pdb|3V03|A Chain A, Crystal Structure Of Bovine Serum Albumin
pdb|3V03|B Chain B, Crystal Structure Of Bovine Serum Albumin
pdb|4F5S|A Chain A, Crystal Structure Of Bovine Serum Albumin
pdb|4F5S|B Chain B, Crystal Structure Of Bovine Serum Albumin
Length = 583
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 234 KMRWVEKNHMVYDYCKDHKRFPHGPPLECSVDN 266
K +VE +V D K HK HG LEC+ D
Sbjct: 224 KAEFVEVTKLVTDLTKVHKECCHGDLLECADDR 256
>pdb|1OA2|A Chain A, Comparison Of Family 12 Glycoside Hydrolases And Recruited
Substitutions Important For Thermal Stability
pdb|1OA2|B Chain B, Comparison Of Family 12 Glycoside Hydrolases And Recruited
Substitutions Important For Thermal Stability
pdb|1OA2|C Chain C, Comparison Of Family 12 Glycoside Hydrolases And Recruited
Substitutions Important For Thermal Stability
pdb|1OA2|D Chain D, Comparison Of Family 12 Glycoside Hydrolases And Recruited
Substitutions Important For Thermal Stability
pdb|1OA2|E Chain E, Comparison Of Family 12 Glycoside Hydrolases And Recruited
Substitutions Important For Thermal Stability
pdb|1OA2|F Chain F, Comparison Of Family 12 Glycoside Hydrolases And Recruited
Substitutions Important For Thermal Stability
Length = 218
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 138 IREFKNLEYLGIPFPKKQPMRIYSSLWNADSWATQGGRIKIDWKYAPFTAS 188
++ ++N + I P+K+ + SS+ SW+ G I+ + Y FTA+
Sbjct: 57 VKSYQNSQ---IAIPQKRTVNSISSMPTTASWSYSGSNIRANVAYDLFTAA 104
>pdb|1H8V|A Chain A, The X-Ray Crystal Structure Of The Trichoderma Reesei
Family 12 Endoglucanase 3, Cel12a, At 1.9 A Resolution
pdb|1H8V|B Chain B, The X-Ray Crystal Structure Of The Trichoderma Reesei
Family 12 Endoglucanase 3, Cel12a, At 1.9 A Resolution
pdb|1H8V|C Chain C, The X-Ray Crystal Structure Of The Trichoderma Reesei
Family 12 Endoglucanase 3, Cel12a, At 1.9 A Resolution
pdb|1H8V|D Chain D, The X-Ray Crystal Structure Of The Trichoderma Reesei
Family 12 Endoglucanase 3, Cel12a, At 1.9 A Resolution
pdb|1H8V|E Chain E, The X-Ray Crystal Structure Of The Trichoderma Reesei
Family 12 Endoglucanase 3, Cel12a, At 1.9 A Resolution
pdb|1H8V|F Chain F, The X-Ray Crystal Structure Of The Trichoderma Reesei
Family 12 Endoglucanase 3, Cel12a, At 1.9 A Resolution
Length = 218
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 138 IREFKNLEYLGIPFPKKQPMRIYSSLWNADSWATQGGRIKIDWKYAPFTAS 188
++ ++N + I P+K+ + SS+ SW+ G I+ + Y FTA+
Sbjct: 57 VKSYQNSQ---IAIPQKRTVNSISSMPTTASWSYSGSNIRANVAYDLFTAA 104
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A +G + I W AP +Y FT + +W+FG
Sbjct: 172 AREGAKFPIKWT-APEAINYGTFTIKSDVWSFG 203
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A +G + I W AP +Y FT + +W+FG
Sbjct: 174 AREGAKFPIKWT-APEAINYGTFTIKSDVWSFG 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A +G + I W AP +Y FT + +W+FG
Sbjct: 176 AREGAKFPIKWT-APEAINYGTFTIKSDVWSFG 207
>pdb|1QGX|A Chain A, X-Ray Structure Of Yeast Hal2p
pdb|1K9Y|A Chain A, The Papase Hal2p Complexed With Magnesium Ions And
Reaction Products: Amp And Inorganic Phosphate
pdb|1K9Z|A Chain A, The Papase Hal2p Complexed With Zinc Ions
pdb|1KA0|A Chain A, The Papase Hal2p Complexed With A Sodium Ion And The
Reaction Product Amp
pdb|1KA1|A Chain A, The Papase Hal2p Complexed With Calcium And Magnesium Ions
And Reaction Substrate: Pap
Length = 357
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 210 SPYSNSNSKTKVWLRHELDIAKKRKMRWVEKNHMVYD 246
SP S++ S TK+ +RH D + VEK H +D
Sbjct: 209 SPSSDAESWTKIHVRHLKDTKDMITLEGVEKGHSSHD 245
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A +G + I W AP +Y FT + +W+FG
Sbjct: 166 AREGAKFPIKWT-APEAINYGTFTIKSDVWSFG 197
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A +G + I W AP +Y FT + +W+FG
Sbjct: 175 AREGAKFPIKWT-APEAINYGTFTIKSDVWSFG 206
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A +G + I W AP +Y FT + +W+FG
Sbjct: 161 AREGAKFPIKWT-APEAINYGTFTIKSDVWSFG 192
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A +G + I W AP +Y FT + +W+FG
Sbjct: 172 AREGAKFPIKWT-APEAINYGTFTIKSDVWSFG 203
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A +G + I W AP +Y FT + +W+FG
Sbjct: 171 AREGAKFPIKWT-APEAINYGTFTIKSDVWSFG 202
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A +G + I W AP +Y FT + +W+FG
Sbjct: 162 AREGAKFPIKWT-APEAINYGTFTIKSDVWSFG 193
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A +G + I W AP +Y FT + +W+FG
Sbjct: 166 AREGAKFPIKWT-APEAINYGTFTIKSDVWSFG 197
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A +G + I W AP +Y FT + +W+FG
Sbjct: 168 AREGAKFPIKWT-APEAINYGTFTIKSDVWSFG 199
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A +G + I W AP +Y FT + +W+FG
Sbjct: 167 AREGAKFPIKWT-APEAINYGTFTIKSDVWSFG 198
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 170 ATQGGRIKIDWKYAPFTASYSNFTADACIWAFG 202
A +G + I W AP +Y FT + +W+FG
Sbjct: 166 AREGAKFPIKWT-APEAINYGTFTIKSDVWSFG 197
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 27.3 bits (59), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D+ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 159 SRLMTGDTXTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 201
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 27.3 bits (59), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D+ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 156 SRLMTGDTXTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 198
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 27.3 bits (59), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D+ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 163 SRLMTGDTXTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 205
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 27.3 bits (59), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 161 SSLWNADSW-ATQGGRIKIDWKYAPFTASYSNFTADACIWAFGA 203
S L D+ A G + I W AP + +Y+ F+ + +WAFG
Sbjct: 156 SRLMTGDTXTAHAGAKFPIKWT-APESLAYNKFSIKSDVWAFGV 198
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,791,200
Number of Sequences: 62578
Number of extensions: 443589
Number of successful extensions: 1118
Number of sequences better than 100.0: 126
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 1055
Number of HSP's gapped (non-prelim): 127
length of query: 267
length of database: 14,973,337
effective HSP length: 97
effective length of query: 170
effective length of database: 8,903,271
effective search space: 1513556070
effective search space used: 1513556070
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)