Query 045763
Match_columns 267
No_of_seqs 267 out of 1655
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 05:16:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045763.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045763hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03161 Probable xyloglucan e 100.0 4E-83 8.7E-88 581.4 31.6 258 1-266 26-290 (291)
2 cd02176 GH16_XET Xyloglucan en 100.0 8.1E-83 1.7E-87 575.2 31.9 253 1-262 5-263 (263)
3 cd02183 GH16_fungal_CRH1_trans 100.0 4.6E-44 1E-48 312.9 24.9 170 14-197 19-202 (203)
4 cd02175 GH16_lichenase lichena 100.0 4.2E-37 9.1E-42 270.0 24.5 171 8-195 27-211 (212)
5 PF00722 Glyco_hydro_16: Glyco 100.0 7.1E-35 1.5E-39 248.8 19.4 173 4-193 3-185 (185)
6 cd00413 Glyco_hydrolase_16 gly 100.0 6.5E-33 1.4E-37 240.9 23.3 170 8-195 25-210 (210)
7 cd02178 GH16_beta_agarase Beta 100.0 1.5E-32 3.2E-37 248.1 21.2 174 14-195 60-257 (258)
8 cd08023 GH16_laminarinase_like 100.0 3.5E-32 7.6E-37 241.4 22.4 175 10-195 35-235 (235)
9 cd02177 GH16_kappa_carrageenas 100.0 5.9E-30 1.3E-34 232.4 21.1 167 14-195 46-268 (269)
10 cd02182 GH16_Strep_laminarinas 100.0 1.3E-29 2.8E-34 228.9 20.0 176 12-195 45-258 (259)
11 cd02180 GH16_fungal_KRE6_gluca 100.0 1.4E-29 3E-34 232.6 17.9 175 14-195 43-294 (295)
12 cd02179 GH16_beta_GRP beta-1,3 100.0 3.4E-29 7.3E-34 232.8 18.0 133 33-167 99-268 (321)
13 cd08024 GH16_CCF Coelomic cyto 100.0 1.3E-28 2.8E-33 229.8 16.1 136 33-170 102-279 (330)
14 COG2273 SKN1 Beta-glucanase/Be 99.9 2.9E-24 6.2E-29 201.8 18.5 157 5-170 71-242 (355)
15 PF06955 XET_C: Xyloglucan end 99.8 7.7E-21 1.7E-25 131.2 3.9 42 221-262 7-51 (51)
16 PF03935 SKN1: Beta-glucan syn 99.6 1.8E-15 4E-20 146.5 13.6 190 11-210 159-466 (504)
17 cd02181 GH16_fungal_Lam16A_glu 99.5 3.2E-13 6.8E-18 123.6 13.0 149 18-170 47-251 (293)
18 PF13385 Laminin_G_3: Concanav 92.9 2.4 5.2E-05 33.2 11.2 66 114-197 84-149 (157)
19 PF06439 DUF1080: Domain of Un 91.3 2.2 4.8E-05 35.5 9.6 32 113-144 125-156 (185)
20 PF09264 Sial-lect-inser: Vibr 88.4 0.93 2E-05 39.4 5.0 100 30-142 16-121 (198)
21 smart00210 TSPN Thrombospondin 88.1 8.1 0.00018 32.9 10.8 87 46-142 56-144 (184)
22 smart00560 LamGL LamG-like jel 87.8 12 0.00027 29.8 14.0 70 113-199 59-130 (133)
23 PF10287 DUF2401: Putative TOS 85.3 3.5 7.5E-05 37.1 7.1 76 46-127 103-207 (235)
24 cd00110 LamG Laminin G domain; 83.7 20 0.00043 28.3 15.1 86 41-140 19-105 (151)
25 KOG1834 Calsyntenin [Extracell 80.5 9.4 0.0002 39.3 8.6 52 114-170 441-492 (952)
26 PF14099 Polysacc_lyase: Polys 72.3 32 0.0007 29.7 9.1 55 107-165 144-203 (224)
27 PF09224 DUF1961: Domain of un 68.6 23 0.00051 31.5 7.2 59 115-194 159-218 (218)
28 PF02210 Laminin_G_2: Laminin 67.2 52 0.0011 24.8 9.7 74 114-195 53-126 (128)
29 PF02973 Sialidase: Sialidase, 64.4 98 0.0021 27.0 13.3 135 39-198 30-176 (190)
30 cd00152 PTX Pentraxins are pla 64.4 92 0.002 26.7 17.2 28 113-140 88-117 (201)
31 smart00282 LamG Laminin G doma 57.4 44 0.00095 26.1 6.5 27 114-140 61-87 (135)
32 smart00159 PTX Pentraxin / C-r 53.9 1.5E+02 0.0031 25.6 17.5 26 113-138 88-115 (206)
33 cd00070 GLECT Galectin/galacto 34.0 88 0.0019 24.7 4.8 48 94-142 56-104 (127)
34 cd06482 ACD_HspB10 Alpha cryst 28.7 1.2E+02 0.0025 22.9 4.4 50 14-63 24-73 (87)
35 PF06832 BiPBP_C: Penicillin-B 26.7 73 0.0016 23.5 3.0 34 128-163 44-77 (89)
36 cd06526 metazoan_ACD Alpha-cry 26.6 1.8E+02 0.0039 21.1 5.0 47 14-63 23-69 (83)
No 1
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional
Probab=100.00 E-value=4e-83 Score=581.35 Aligned_cols=258 Identities=56% Similarity=1.024 Sum_probs=239.2
Q ss_pred CCccccceeeCCC-eEEecCCCEEEEEEcCCCCCeEEEcceeEeEEEEEEEEecCCCCCceEEEEEEeeCCCCCCeeeec
Q 045763 1 NFYDDFEITWGHG-AKIHDNGKVLTLNLDKSGGSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKGANWDEIDFE 79 (267)
Q Consensus 1 ~f~~~~~~~w~~~-~~~~~~G~~l~L~ld~~sGsg~~Sk~~~~YG~~eariKlp~g~s~G~~~Afwl~~~~~~~~EID~E 79 (267)
+|.++|.++|+.+ +.+.++|+.|+|+||+.+|++|+||+.|+||+||||||||+|+++|+||||||++.++.+||||||
T Consensus 26 ~f~~~~~~~w~~~~~~~~~~g~~l~L~ld~~sgs~~~Sk~~f~yGr~E~riKLp~G~saG~v~AFwl~s~~~~~dEIDiE 105 (291)
T PLN03161 26 DFSKSMYFTWGADHSSMLGNGDNLQLVLDQSSGSGIKSKRAFLFGSIEMLIKLVPGNSAGTVTAYYLSSTGSRHDEIDFE 105 (291)
T ss_pred cccccceeeEcCCcEEEeCCCCEEEEEEeCCccCcEEecceEEEEEEEEEEEeCCCCCCCeEEEEEecCCCCCCCeEEEE
Confidence 4899999999999 888888889999999999999999999999999999999998889999999999977789999999
Q ss_pred cCCCCCCCceeEEeeeecCCCCCcceEEEcCCCCCCCcEEEEEEEeCCceEEEECCeeEEEEeccccCCCCCCCCCCcEE
Q 045763 80 FLGNVTGEPYTLHTNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGIPFPKKQPMRI 159 (267)
Q Consensus 80 ~lG~~~g~p~~~~tn~~~~g~g~~~~~~~l~fd~~~dfHtY~i~W~p~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm~l 159 (267)
|||+++++++++|||+|.+|.+++++++.++|||+++||+|+|+|+|++|+|||||++||++++.+..+.+||+++||+|
T Consensus 106 fLG~~~g~~~~vqtN~y~~g~g~re~~~~l~fDpt~dFHtYsI~Wtp~~I~wyVDG~~iRt~~~~~~~g~~yP~~~pM~i 185 (291)
T PLN03161 106 FLGNVSGQPYTIHTNIYTQGNGSREQQFRPWFDPTADFHNYTIHWNPSEVVWYVDGTPIRVFRNYENEGIAYPNKQGMRV 185 (291)
T ss_pred ecCCCCCCceEEEeceEeCCcCCcceeccccCCCccCcEEEEEEEchhhEEEEECCEEEEEEEcccccCCcCCCccceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999987777889999889999
Q ss_pred EEeeeeCCCCCCCCCccccCCCCCCEEEEEeEEEEeeeecCCC--CCcCCCCCCCCCCCcccccccc----ccCCHHHHH
Q 045763 160 YSSLWNADSWATQGGRIKIDWKYAPFTASYSNFTADACIWAFG--ASSCDTNSPYSNSNSKTKVWLR----HELDIAKKR 233 (267)
Q Consensus 160 ~lnlw~gg~Wat~GG~~~~d~~~aPf~a~~~~~~v~~c~~~~~--~~~c~~~~~~~~~~~~~~~~~~----~~l~~~~~~ 233 (267)
++|||+|++|||+||++||||+++||+|.|++|++++|.++++ ...|...+.. .||+ ++|+++|++
T Consensus 186 ~~siW~g~~wAt~gG~~kidw~~aPf~a~~~~f~~~~C~~~~~~~~~~c~~~~~~--------~~~~~~~~~~l~~~~~~ 257 (291)
T PLN03161 186 YSSLWNADNWATQGGRVKIDWTLAPFVARGRRFRARACKWNGPVSIKQCADPTPS--------NWWTSPSYSQLTNAQLT 257 (291)
T ss_pred EEeeecCCCcccCCCceeccCCcCCeeEEeeeEEEEeeccCCCCCccccCCCCcc--------ccccCccccCCCHHHHH
Confidence 9999999999999999999999999999999999999987643 3468643211 5776 479999999
Q ss_pred HHHHHhhcCeEEeccCCCCCCCCCCCCCCcCCC
Q 045763 234 KMRWVEKNHMVYDYCKDHKRFPHGPPLECSVDN 266 (267)
Q Consensus 234 ~~~~~~~~~~~y~yc~d~~r~~~~~p~ec~~~~ 266 (267)
+|+|||+||||||||+|++|||+++||||.++|
T Consensus 258 ~~~~v~~~~m~Y~YC~D~~R~~~~~p~EC~~~~ 290 (291)
T PLN03161 258 QMKKVRDNFMIYDYCKDTKRFNGVMPPECFKPQ 290 (291)
T ss_pred HHHHHHhCcEEEeccCCCCcCCCCcCcccCCCc
Confidence 999999999999999999999988899999876
No 2
>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16. Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling.
Probab=100.00 E-value=8.1e-83 Score=575.16 Aligned_cols=253 Identities=58% Similarity=1.134 Sum_probs=236.5
Q ss_pred CCccccceeeCCC-eEEecCCCEEEEEEcCCCCCeEEEcceeEeEEEEEEEEecCCCCCceEEEEEEeeCC-CCCCeeee
Q 045763 1 NFYDDFEITWGHG-AKIHDNGKVLTLNLDKSGGSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKG-ANWDEIDF 78 (267)
Q Consensus 1 ~f~~~~~~~w~~~-~~~~~~G~~l~L~ld~~sGsg~~Sk~~~~YG~~eariKlp~g~s~G~~~Afwl~~~~-~~~~EID~ 78 (267)
+|.++|.++|+++ ++++++|+.|+|+||+.+|++|+||+.|+||+||||||||+|+++|+||||||++++ |.++||||
T Consensus 5 ~f~~~~~~~w~~~~~~~~~~g~~~~L~ld~~s~~~i~Sk~~f~YG~~E~riKlp~g~s~G~~pAFwl~~~~wp~~~EID~ 84 (263)
T cd02176 5 SFDENFFVTWGPDHIRVSNDGTSVQLTLDQSSGSGFKSKNKYLFGFFSMRIKLPPGDSAGTVTAFYLSSQGPDNHDEIDF 84 (263)
T ss_pred CccccceeeEcCCcEEEeCCCCEEEEEEcCCCCccEEEccEEEEEEEEEEEEeCCCCCCCeEEEEEECCCCCCCCCeEEE
Confidence 5899999999999 999988999999999999999999999999999999999998889999999999997 88999999
Q ss_pred ccCCCCCCCceeEEeeeecCCCCCcceEEEcCCCCCCCcEEEEEEEeCCceEEEECCeeEEEEeccccCCCCCCCCCCcE
Q 045763 79 EFLGNVTGEPYTLHTNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGIPFPKKQPMR 158 (267)
Q Consensus 79 E~lG~~~g~p~~~~tn~~~~g~g~~~~~~~l~fd~~~dfHtY~i~W~p~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm~ 158 (267)
|++|+.+|+|+++|||+|.+|.+++++++.++|||+++||+|+|+|+|++|+|||||++||++++.+..+.+||+++||+
T Consensus 85 E~lGn~~g~~~~~qtnv~~~g~g~r~~~~~l~fdpt~dFHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm~ 164 (263)
T cd02176 85 EFLGNVTGQPYTLQTNVFANGVGGREQRIYLWFDPTADFHTYSILWNPHQIVFYVDDVPIRVFKNNEALGVPYPSSQPMG 164 (263)
T ss_pred EEecccCCCceEEEEEEeCCCCCCCceeeecCCCCCCCeEEEEEEEccceEEEEECCEEEEEEecccccCCCCCccceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999998877788999989999
Q ss_pred EEEeeeeCCCCCCCCCccccCCCCCCEEEEEeEEEEeeeecCCCCCcCCCCCCCCCCCcccccccc----ccCCHHHHHH
Q 045763 159 IYSSLWNADSWATQGGRIKIDWKYAPFTASYSNFTADACIWAFGASSCDTNSPYSNSNSKTKVWLR----HELDIAKKRK 234 (267)
Q Consensus 159 l~lnlw~gg~Wat~GG~~~~d~~~aPf~a~~~~~~v~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~----~~l~~~~~~~ 234 (267)
|++|||+||+|||+||++++||+++||+|.|++|+|++|.+++....|..+... .||+ ++|+++|+++
T Consensus 165 l~~niW~g~~WAt~gG~~~~d~~~aPf~a~~~~~~~~~c~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~ 236 (263)
T cd02176 165 VYASIWDGSDWATQGGRVKIDWSYAPFVASYRDFKLDGCVVDPGDSFSSCSCTE--------DWWNGSTYQQLSANQQRA 236 (263)
T ss_pred EEEeeEcCCCcccCCCcccccCCCCCeeEEEeeEEEeeeecCCCCccccCCCcc--------ccccccccccCCHHHHHH
Confidence 999999999999999999999999999999999999999987655566543211 5666 4899999999
Q ss_pred HHHHhhcCeEEeccCCCCCCCCCCCCCC
Q 045763 235 MRWVEKNHMVYDYCKDHKRFPHGPPLEC 262 (267)
Q Consensus 235 ~~~~~~~~~~y~yc~d~~r~~~~~p~ec 262 (267)
|+|||+||||||||+|++|||. +||||
T Consensus 237 ~~~~~~~~~~y~yC~d~~r~~~-~p~ec 263 (263)
T cd02176 237 MEWVRRNYMVYDYCDDRKRYPV-PPPEC 263 (263)
T ss_pred HHHHHHCCEEEecCCCCCcCCC-CcCCC
Confidence 9999999999999999999995 89999
No 3
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase. Group of fungal GH16 members related to Saccharomyces cerevisiae Crh1p. Chr1p and Crh2p are transglycosylases that are required for the linkage of chitin to beta(1-3)glucose branches of beta(1-6)glucan, an important step in the assembly of new cell wall. Both have been shown to be glycosylphosphatidylinositol (GPI)-anchored. A third homologous protein, Crr1p, functions in the formation of the spore wall. They belongs to the family 16 of glycosyl hydrolases that includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues.
Probab=100.00 E-value=4.6e-44 Score=312.94 Aligned_cols=170 Identities=31% Similarity=0.621 Sum_probs=148.4
Q ss_pred eEEecCCCEEEEEEcCC-CCCeEEEcceeEeEEEEEEEEecCCCCCceEEEEEEeeCCCCCCeeeeccCCCCCCCceeEE
Q 045763 14 AKIHDNGKVLTLNLDKS-GGSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKGANWDEIDFEFLGNVTGEPYTLH 92 (267)
Q Consensus 14 ~~~~~~G~~l~L~ld~~-sGsg~~Sk~~~~YG~~eariKlp~g~s~G~~~Afwl~~~~~~~~EID~E~lG~~~g~p~~~~ 92 (267)
|.+.. ..|+|+|++. +|++|.|++.|+||+||||||||.+ +|+||||||+++ .++|||||++|+ ++..+|
T Consensus 19 ~~~~~--~~~~l~~~~~~~~~~i~s~~~f~YG~~EaR~Klp~g--~G~wpAfWl~~~--~~gEIDIE~~G~---~~~~~~ 89 (203)
T cd02183 19 VDYDD--DGASLTIPKRGDGPTISSTFYIFYGKVEVTMKAAPG--QGIVSSFVLQSD--DLDEIDWEWVGG---DLTQVQ 89 (203)
T ss_pred EeECC--CeEEEEEcCCCCCCeEEeccEEEeEEEEEEEEecCC--CeEEEEEEEECC--CCCEEEEEecCC---CCCEEE
Confidence 65543 3599999987 6889999999999999999999998 899999999987 579999999997 456899
Q ss_pred eeeecCCCC---CcceEEEcCCCCCCCcEEEEEEEeCCceEEEECCeeEEEEecccc-CCCCCCCCCCcEEEEeeeeCCC
Q 045763 93 TNVFSQGNG---DRERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLEY-LGIPFPKKQPMRIYSSLWNADS 168 (267)
Q Consensus 93 tn~~~~g~g---~~~~~~~l~fd~~~dfHtY~i~W~p~~I~fyVDG~~vr~~~~~~~-~g~~~P~~~Pm~l~lnlw~gg~ 168 (267)
+|++.+|.. ++++.+.+.++++++||+|+|+|+|++|+|||||++++++++.+. .+..||. +||+|+||+|+||+
T Consensus 90 tn~~~~g~~~~~~~~~~~~~~~~~~~dFHtY~veWtpd~I~~yVDG~~v~~~~~~~~~~~~~~p~-~P~~l~ln~W~gg~ 168 (203)
T cd02183 90 TNYFGKGNTTTYDRGGYHPVPNPQTEEFHTYTIDWTKDRITWYIDGKVVRTLTKADTTGGYGYPQ-TPMRLQIGIWAGGD 168 (203)
T ss_pred eEEECCCCCCCCCCceEeeCCCCCCcCcEEEEEEEecCEEEEEECCEEEEEEehhhcccCCCCCC-CCcEEEEEEecCCC
Confidence 999987754 355677888888899999999999999999999999999987542 3567995 99999999999985
Q ss_pred ---------CCCCCCccccCCCCCCEEEEEeEEEEeee
Q 045763 169 ---------WATQGGRIKIDWKYAPFTASYSNFTADAC 197 (267)
Q Consensus 169 ---------Wat~GG~~~~d~~~aPf~a~~~~~~v~~c 197 (267)
|| ||+ +||+.+||+|.|++|+|.+.
T Consensus 169 ~~~~~g~~~Wa--Gg~--~d~~~~P~~~~vd~v~v~~~ 202 (203)
T cd02183 169 PSNAPGTIEWA--GGE--TDYDKGPFTMYVKSVTVTDY 202 (203)
T ss_pred ccccCCcccCC--CCc--cCCCCCCEEEEEEEEEEEeC
Confidence 88 776 79999999999999999754
No 4
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16. Lichenase, also known as 1,3-1,4-beta-glucanase, is a member of glycosyl hydrolase family 16, that specifically cleaves 1,4-beta-D-glucosidic bonds in mixed-linked beta glucans that also contain 1,3-beta-D-glucosidic linkages. Natural substrates of beta-glucanase are beta-glucans from grain endosperm cell walls or lichenan from the Islandic moss, Cetraria islandica. This protein is found not only in bacteria but also in anaerobic fungi. This domain includes two seven-stranded antiparallel beta-sheets that are adjacent to one another forming a compact, jellyroll beta-sandwich structure.
Probab=100.00 E-value=4.2e-37 Score=269.99 Aligned_cols=171 Identities=30% Similarity=0.608 Sum_probs=144.2
Q ss_pred eeeCCC-eEEecCCCEEEEEEcCCC-------CCeEEEcceeEeEEEEEEEEecCCCCCceEEEEEEeeCC---CCCCee
Q 045763 8 ITWGHG-AKIHDNGKVLTLNLDKSG-------GSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKG---ANWDEI 76 (267)
Q Consensus 8 ~~w~~~-~~~~~~G~~l~L~ld~~s-------Gsg~~Sk~~~~YG~~eariKlp~g~s~G~~~Afwl~~~~---~~~~EI 76 (267)
.+|.++ |++. +| .|+|++.+.. +++|.|+.+|+||+||||||+|.+ +|+|+||||++.. ..++||
T Consensus 27 ~~~~~~nv~v~-~g-~L~l~~~~~~~~~~~~tsg~i~S~~~f~yG~~ear~k~~~~--~G~~~Afwl~~~~~~~~~~~EI 102 (212)
T cd02175 27 CTWSADNVEFS-DG-GLALTLTNDTYGEKPYACGEYRTRGFYGYGRYEVRMKPAKG--SGVVSSFFTYTGPYDGDPHDEI 102 (212)
T ss_pred eeEccccEEEE-CC-eEEEEEeCCcCCCCccccceEEECceEEeeEEEEEEEcCCC--CeEEEEEEEEecCCCCCCCCEE
Confidence 567777 7776 45 4899986543 577999999999999999999988 8999999999742 457999
Q ss_pred eeccCCCCCCCceeEEeeeecCCCCCcceEEEcCCCCCCCcEEEEEEEeCCceEEEECCeeEEEEeccccCCCCCCCCCC
Q 045763 77 DFEFLGNVTGEPYTLHTNVFSQGNGDRERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGIPFPKKQP 156 (267)
Q Consensus 77 D~E~lG~~~g~p~~~~tn~~~~g~g~~~~~~~l~fd~~~dfHtY~i~W~p~~I~fyVDG~~vr~~~~~~~~g~~~P~~~P 156 (267)
|||++|++. ..++++++.++.+..+..+.+.++++++||+|+|+|+|++|+|||||+++++++..+ ..+|. +|
T Consensus 103 DiE~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~Y~v~W~~~~i~~yvDg~~v~~~~~~~---~~~p~-~p 175 (212)
T cd02175 103 DIEFLGKDT---TKVQFNYYTNGVGGHEKLIDLGFDASEGFHTYAFEWEPDSIRWYVDGELVHEATATD---PNIPD-TP 175 (212)
T ss_pred EEEEccCCC---CEeEEEEECCCCCCCceEEeCCCCcccccEEEEEEEeCCEEEEEECCEEEEEEcCcc---CCCCC-CC
Confidence 999999853 467888888877776777788889999999999999999999999999999998643 35786 99
Q ss_pred cEEEEeeeeCC---CCCCCCCccccCCCCCCEEEEEeEEEEe
Q 045763 157 MRIYSSLWNAD---SWATQGGRIKIDWKYAPFTASYSNFTAD 195 (267)
Q Consensus 157 m~l~lnlw~gg---~Wat~GG~~~~d~~~aPf~a~~~~~~v~ 195 (267)
|+|+||||.|+ +|+ |. ++. .+|+.|+||+|||.
T Consensus 176 ~~i~~n~w~~~~~~~W~---G~--~~~-~~p~~~~vd~vr~~ 211 (212)
T cd02175 176 GKIMMNLWPGDGVDDWL---GP--FDG-GTPLTAEYDWVSYT 211 (212)
T ss_pred cEEEEEEEcCCCCCCcC---Cc--CCC-CCCeEEEEEEEEEe
Confidence 99999999985 598 54 465 89999999999985
No 5
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 16 GH16 from CAZY comprises enzymes with a number of known activities; lichenase (3.2.1.73 from EC); xyloglucan xyloglucosyltransferase (2.4.1.207 from EC); agarase (3.2.1.81 from EC); kappa-carrageenase (3.2.1.83 from EC); endo-beta-1,3-glucanase (3.2.1.39 from EC); endo-beta-1,3-1,4-glucanase (3.2.1.6 from EC); endo-beta-galactosidase (3.2.1.103 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3DGT_A 2CL2_A 2WLQ_A 2WNE_A 2W39_A 2W52_A 3ILN_A 4DFS_A 1UMZ_A 1UN1_B ....
Probab=100.00 E-value=7.1e-35 Score=248.78 Aligned_cols=173 Identities=37% Similarity=0.697 Sum_probs=147.7
Q ss_pred cccceeeCCC-eEEecCCCEEEEEEcC-----CCCCeEEEcceeEeEEEEEEEEecCCCCCceEEEEEEeeCC--CCCCe
Q 045763 4 DDFEITWGHG-AKIHDNGKVLTLNLDK-----SGGSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKG--ANWDE 75 (267)
Q Consensus 4 ~~~~~~w~~~-~~~~~~G~~l~L~ld~-----~sGsg~~Sk~~~~YG~~eariKlp~g~s~G~~~Afwl~~~~--~~~~E 75 (267)
+.+.++|.++ |.+.+ |+.|.|++++ .++++|.|+..++||+||||||+|.+ +|+|+||||.+.. +.++|
T Consensus 3 ~~~~~~~~~~nv~~~~-g~~L~L~~~~~~~~~~~sg~i~s~~~~~yG~~ear~k~~~~--~G~~~afwl~~~~~~~~~~E 79 (185)
T PF00722_consen 3 DQYNCTWSPDNVTVED-GGNLVLRADKEPGKPYTSGEIQSKFSFKYGRFEARIKAPPG--PGVWPAFWLTGADGWPDGGE 79 (185)
T ss_dssp CTEEEEETCCGEEEET-TSEEEEEEEEEETEEEEEEEEEESSEBSSEEEEEEEECSCS--TTEEEEEEEETTGSTTTTEE
T ss_pred CceEEeeCCCcEEEcC-CCEEEEEEEecccCceEeCEEEEcceeECcEEEEEEEecCC--CceEecccccccccccchhh
Confidence 5789999999 98865 4579999977 46788999999999999999999987 8999999997532 78899
Q ss_pred eeeccCCCCCCCceeEEeeeecCCCCCc--ceEEEcCCCCCCCcEEEEEEEeCCceEEEECCeeEEEEeccccCCCCCCC
Q 045763 76 IDFEFLGNVTGEPYTLHTNVFSQGNGDR--ERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGIPFPK 153 (267)
Q Consensus 76 ID~E~lG~~~g~p~~~~tn~~~~g~g~~--~~~~~l~fd~~~dfHtY~i~W~p~~I~fyVDG~~vr~~~~~~~~g~~~P~ 153 (267)
||||++|++.. .+++++|..+.+.. +..+.+.+++..+||+|+|+|+|++|+|||||++++++......+.++|.
T Consensus 80 IDiE~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~y~~~W~~~~i~fyiDg~~~~~~~~~~~~~~~~P~ 156 (185)
T PF00722_consen 80 IDIEFLGNDPT---QVQTNVHWNGDGDSNWEKRVPLGFDPSTDFHTYGFEWTPDRIRFYIDGKLVRTVTNSDVPGSPYPF 156 (185)
T ss_dssp EEEEEETTSTT---EEEEEEEBTTBSCEEEEEEEETSSTTTTSEEEEEEEEETTEEEEEETTEEEEEEESSGSTTTCSSE
T ss_pred hhhhhcccccc---ceeeeeeecccCCcccceeeccccCcCCCcEEEEEEEecCeEEEEECCEEEEEEeccccccccCcc
Confidence 99999998544 59999999888775 56777888999999999999999999999999999999987654446887
Q ss_pred CCCcEEEEeeeeCCCCCCCCCccccCCCCCCEEEEEeEEE
Q 045763 154 KQPMRIYSSLWNADSWATQGGRIKIDWKYAPFTASYSNFT 193 (267)
Q Consensus 154 ~~Pm~l~lnlw~gg~Wat~GG~~~~d~~~aPf~a~~~~~~ 193 (267)
..||+|.+++|.+++|++..| .|++|+||
T Consensus 157 ~~~~~~~~~~w~~~~~~~~~~-----------~m~vDwvr 185 (185)
T PF00722_consen 157 STPMNLALGLWPGGDWAGPAG-----------EMEVDWVR 185 (185)
T ss_dssp EEEEEEEEEECEBTTTHSSEC-----------EEEEEEEE
T ss_pred cceeEEEEccccCCCCCCCCC-----------EEEEEeEC
Confidence 789999999999998886555 46666665
No 6
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16. The O-Glycosyl hydrolases are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A glycosyl hydrolase classification system based on sequence similarity has led to the definition of more than 95 different families inlcuding glycosyl hydrolase family 16. Family 16 includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues.
Probab=100.00 E-value=6.5e-33 Score=240.86 Aligned_cols=170 Identities=35% Similarity=0.583 Sum_probs=139.2
Q ss_pred eeeCCC-eEEecCCCEEEEEEcCC------CCCeEEE-cceeEeEEEEEEEEecCCCCCceEEEEEEeeCC---CCCCee
Q 045763 8 ITWGHG-AKIHDNGKVLTLNLDKS------GGSGFQS-KKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKG---ANWDEI 76 (267)
Q Consensus 8 ~~w~~~-~~~~~~G~~l~L~ld~~------sGsg~~S-k~~~~YG~~eariKlp~g~s~G~~~Afwl~~~~---~~~~EI 76 (267)
..|.++ +.+.++| .|.|++.+. ++++|.| ++.++||+||+|||+|.+ .|+|+||||++.+ +..+||
T Consensus 25 ~~~~~~nv~~~~~G-~L~l~~~~~~~~~~~~sg~i~s~~~~~~yG~~ear~k~~~~--~G~~~afw~~~~~~~~~~~~EI 101 (210)
T cd00413 25 MTNSPNNVYVENDG-GLTLRTDRDQTDGPYSSAEIDSQKNNYTYGYYEARAKLAGG--PGAVSAFWTYSDDDDPPDGGEI 101 (210)
T ss_pred EEECccCEEEeCCC-eEEEEEEecCCCCceEeEEEEeCcceEeeEEEEEEEEcCCC--CceEEEEEEeCCCCCCCCCCeE
Confidence 356677 8877656 488888543 3577999 999999999999999988 8999999999986 579999
Q ss_pred eeccCCCCCCCceeEEeeeecCCCC-----CcceEEEcCCCCCCCcEEEEEEEeCCceEEEECCeeEEEEeccccCCCCC
Q 045763 77 DFEFLGNVTGEPYTLHTNVFSQGNG-----DRERQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGIPF 151 (267)
Q Consensus 77 D~E~lG~~~g~p~~~~tn~~~~g~g-----~~~~~~~l~fd~~~dfHtY~i~W~p~~I~fyVDG~~vr~~~~~~~~g~~~ 151 (267)
|||++|++ +..+++++|..+.+ .......+.+++.++||+|+|+|+|++|+|||||++++++... .
T Consensus 102 DiE~~~~~---~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~H~Y~~~W~~~~i~~yvDG~~~~~~~~~------~ 172 (210)
T cd00413 102 DIEFLGRD---PTTVQTNVHWPGYGAGATTGEEKSVHLPFDPADDFHTYRVDWTPGEITFYVDGVLVATITNQ------V 172 (210)
T ss_pred EEEecccC---CCeEEEEEecCCCCcccccccceeecCCCCCccCeEEEEEEEeCCEEEEEECCEEEEEECCC------C
Confidence 99999975 44678888876543 2334555666678999999999999999999999999998743 6
Q ss_pred CCCCCcEEEEeeeeCCCCCCCCCccccCCCCCCEEEEEeEEEEe
Q 045763 152 PKKQPMRIYSSLWNADSWATQGGRIKIDWKYAPFTASYSNFTAD 195 (267)
Q Consensus 152 P~~~Pm~l~lnlw~gg~Wat~GG~~~~d~~~aPf~a~~~~~~v~ 195 (267)
|. +||+|+||+|.+++|+.. .+....|..|.|++|||.
T Consensus 173 p~-~p~~i~ln~~~~~~~~~~-----~~~~~~~~~~~Vd~vrvy 210 (210)
T cd00413 173 PD-DPMNIILNLWSDGGWWWG-----GPPPGAPAYMEIDWVRVY 210 (210)
T ss_pred CC-CCcEEEEEEEECCCCccc-----CCCCCCCcEEEEEEEEEC
Confidence 65 999999999999998732 244688999999999973
No 7
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16. Beta-agarase is a glycosyl hydrolase family 16 (GH16) member that hydrolyzes the internal beta-1,4-linkage of agarose, a hydrophilic polysaccharide found in the cell wall of Rhodophyceaea, marine red algae. Agarose is a linear chain of galactose units linked by alternating L-alpha-1,3- and D-beta-1,4-linkages that are additionally modified by a 3,6-anhydro-bridge. Agarose forms thermo-reversible gels that are widely used in the food industry or as a laboratory medium. While beta-agarases are also found in two other families derived from the sequence-based classification of glycosyl hydrolases (GH50, and GH86) the GH16 members are most abundant. This domain adopts a curved beta-sandwich conformation, with a tunnel-shaped active site cavity, referred to as a jellyroll fold.
Probab=100.00 E-value=1.5e-32 Score=248.05 Aligned_cols=174 Identities=21% Similarity=0.244 Sum_probs=131.2
Q ss_pred eEEecCCCEEEEEEcCCC-----------CCeEEEcceeEeEEEEEEEEecCCCCCceEEEEEEeeCC-CCCCeee-ecc
Q 045763 14 AKIHDNGKVLTLNLDKSG-----------GSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKG-ANWDEID-FEF 80 (267)
Q Consensus 14 ~~~~~~G~~l~L~ld~~s-----------Gsg~~Sk~~~~YG~~eariKlp~g~s~G~~~Afwl~~~~-~~~~EID-~E~ 80 (267)
+.+ .+| .|.|++.+.. +++|.||+.++|||||||||||.+ . .+|||||++.+ +.++||| ||+
T Consensus 60 v~v-~~G-~L~i~a~~~~~~~~~~~~~~tsg~i~t~~~~~YG~~EaR~K~p~~--~-~~pAfW~~~~~~~~~gEIDI~E~ 134 (258)
T cd02178 60 VSV-EDG-NLVLSATRHPGTELGNGYKVTTGSITSKEKVKYGYFEARAKASNL--P-MSSAFWLLSDTKDSTTEIDILEH 134 (258)
T ss_pred eEE-ECC-EEEEEEEcCCCCcCCCCccEEEEEEEeCCceEEEEEEEEEEcCCC--C-ccceEEEccCCCCCCCcEEhhhc
Confidence 544 456 5888885443 356999999999999999999977 4 58999999974 6899999 899
Q ss_pred CCCCC--CCceeEEeeeecCCCC-----Cc---ceEEEcCCCCCCCcEEEEEEEe-CCceEEEECCeeEEEEeccccCCC
Q 045763 81 LGNVT--GEPYTLHTNVFSQGNG-----DR---ERQFHLWFDPTTDFHTYSILWN-PKRVIFYADDVPIREFKNLEYLGI 149 (267)
Q Consensus 81 lG~~~--g~p~~~~tn~~~~g~g-----~~---~~~~~l~fd~~~dfHtY~i~W~-p~~I~fyVDG~~vr~~~~~~~~g~ 149 (267)
+|+.. ..+..+|+++|..+.+ .+ .....+.++++++||||+|+|+ |++|+|||||++++++++.+. ..
T Consensus 135 ~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~fHtY~veW~~p~~i~fyvDG~~~~~~~~~~~-~~ 213 (258)
T cd02178 135 YGGDREEWFATRMNSNTHVFIRDPEQDYQPKDDGSWYYNPTELADDFHVYGVYWKDPDTIRFYIDGVLVRTVENSEI-TD 213 (258)
T ss_pred cCCCCCccccceeeeeEEEccCCCCCCccccccceeecCCCccccCeEEEEEEEcCCCeEEEEECCEEEEEEcCccc-Cc
Confidence 99763 2244678887632221 11 2234455667899999999999 999999999999999987543 34
Q ss_pred CCCCCCCcEEEEeeeeCCCCCCCCCccccCCCCCCEEEEEeEEEEe
Q 045763 150 PFPKKQPMRIYSSLWNADSWATQGGRIKIDWKYAPFTASYSNFTAD 195 (267)
Q Consensus 150 ~~P~~~Pm~l~lnlw~gg~Wat~GG~~~~d~~~aPf~a~~~~~~v~ 195 (267)
.+|+++||+|||||++|| |+...+.. ..-...|..|.||+|||.
T Consensus 214 ~~~f~~p~~liln~avg~-w~g~~~~~-~~~~~~p~~m~VDYVRvy 257 (258)
T cd02178 214 GTGFDQPMYIIIDTETYD-WRGEPTDE-ELADDSKNTFYVDYVRVY 257 (258)
T ss_pred CCcCCCCeEEEEEecccc-CCCCCCcc-ccCCCCCCeEEEEEEEEe
Confidence 567789999999999998 98311121 122356999999999985
No 8
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.
Probab=100.00 E-value=3.5e-32 Score=241.37 Aligned_cols=175 Identities=25% Similarity=0.421 Sum_probs=136.9
Q ss_pred eCCC-eEEecCCCEEEEEEcCCC----------CCeEEE--cceeEeEEEEEEEEecCCCCCceEEEEEEeeCC------
Q 045763 10 WGHG-AKIHDNGKVLTLNLDKSG----------GSGFQS--KKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKG------ 70 (267)
Q Consensus 10 w~~~-~~~~~~G~~l~L~ld~~s----------Gsg~~S--k~~~~YG~~eariKlp~g~s~G~~~Afwl~~~~------ 70 (267)
+.++ +.+. +| .|.|+..+.+ +++|.| ++.++|||||||||+|.+ +|+||||||++..
T Consensus 35 ~~~~nv~v~-~G-~L~i~~~~~~~~~~~~~~~~sg~i~S~~~~~~~yG~~E~r~k~~~~--~G~~pafWl~~~~~~~~~w 110 (235)
T cd08023 35 YRPENAYVE-DG-NLVITARKEPDKGGDGYPYTSGRITTKGKFSFTYGRVEARAKLPKG--QGTWPAFWMLGENIKYVGW 110 (235)
T ss_pred CCCCCeEEE-CC-EEEEEEEECCCCCCCcccEEEEEEEECCCcceeCCEEEEEEEccCC--CCceeEEEEcCCCCCCCCC
Confidence 3445 6654 56 5888875432 346999 899999999999999988 8999999999864
Q ss_pred CCCCeee-eccCCCCCCCceeEEeeeecCCCC----CcceEEEcCC-CCCCCcEEEEEEEeCCceEEEECCeeEEEEecc
Q 045763 71 ANWDEID-FEFLGNVTGEPYTLHTNVFSQGNG----DRERQFHLWF-DPTTDFHTYSILWNPKRVIFYADDVPIREFKNL 144 (267)
Q Consensus 71 ~~~~EID-~E~lG~~~g~p~~~~tn~~~~g~g----~~~~~~~l~f-d~~~dfHtY~i~W~p~~I~fyVDG~~vr~~~~~ 144 (267)
+..+||| ||++|+. +..+++++|..+.. .....+.+.. ++.++||+|+|+|+|++|+|||||++|+++++.
T Consensus 111 ~~~~EIDI~E~~g~~---~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~fHtY~~~W~p~~i~~yvDG~~v~~~~~~ 187 (235)
T cd08023 111 PASGEIDIMEYVGNE---PNTVYGTLHGGATNDGNNGSGGSYTLPTDDLSDDFHTYAVEWTPDKITFYVDGKLYFTYTNP 187 (235)
T ss_pred CCCCcceeEecCCCC---CCeEEEEEECCCCCCCCCcccccEECCCCCcCCCcEEEEEEEECCEEEEEECCEEEEEEccc
Confidence 4578999 7999985 44788888877653 2334455554 688999999999999999999999999999875
Q ss_pred ccCC-CCCCCCCCcEEEEeeeeCCCCCCCCCccccCCCCCCEEEEEeEEEEe
Q 045763 145 EYLG-IPFPKKQPMRIYSSLWNADSWATQGGRIKIDWKYAPFTASYSNFTAD 195 (267)
Q Consensus 145 ~~~g-~~~P~~~Pm~l~lnlw~gg~Wat~GG~~~~d~~~aPf~a~~~~~~v~ 195 (267)
.... ..+|.++||+|+||++++++|+ |.. ..-...|..|.||+|||.
T Consensus 188 ~~~~~~~~~~~~p~~liln~~~gg~w~---g~~-~~~~~~p~~~~VDyVrvy 235 (235)
T cd08023 188 NTDNGGQWPFDQPFYLILNLAVGGNWP---GPP-DDDTPFPATMEVDYVRVY 235 (235)
T ss_pred ccCCcccCCCCCCcEEEEEEEEcCCCC---CCC-CCCCCCCCEEEEEEEEEC
Confidence 4321 2356679999999999999998 431 233567999999999984
No 9
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16. Kappa-carrageenase is a glycosyl hydrolase family 16 (GH16) member that hydrolyzes the internal beta-1,4-linkage of kappa-carrageenans, a hydrophilic polysaccharide found in the cell wall of Rhodophyceaea, marine red algae. Carrageenans are linear chains of galactose units linked by alternating D-alpha-1,3- and D-beta-1,4-linkages that are additionally modified by a 3,6-anhydro-bridge. Depending on the position and number of sulfate ester modifications they are subdivided into kappa-, iota-, and lambda-carrageenases, kappa being modified once. Carrageenans form thermo-reversible gels widely used for industrial applications. Kappa-carrageenases exist in bacteria belonging to at least three phylogenetically distant branches, including pseudoalteromonas, planctomycetes, and baceroidetes. This domain adopts a curved beta-sandwich conformation, with a tunnel-shaped active site cavity, referred to
Probab=99.97 E-value=5.9e-30 Score=232.45 Aligned_cols=167 Identities=28% Similarity=0.352 Sum_probs=123.4
Q ss_pred eEEecCCCEEEEEEcCC-------------------CCCeEEEcceeEeEEEEEEEEecC-CCCCceEEEEEEeeC----
Q 045763 14 AKIHDNGKVLTLNLDKS-------------------GGSGFQSKKEYLFGKIDMRIKLVP-GYSAGTVTAYYLSSK---- 69 (267)
Q Consensus 14 ~~~~~~G~~l~L~ld~~-------------------sGsg~~Sk~~~~YG~~eariKlp~-g~s~G~~~Afwl~~~---- 69 (267)
+. ..+|. |.|++.+. +++.+.||.+|+||||||||||++ + +|+||||||+++
T Consensus 46 v~-v~dG~-L~i~a~~e~~~~~~~~~~~~~~~~~~ytSg~~~t~~~~~YG~~EaRik~~p~~--~G~wpAfW~~~~~~~~ 121 (269)
T cd02177 46 VV-ISNGI-LELTMRRNANNTTFWDQQQVPDGPTYFTSGIFKSYAKGTYGYYEARIKGADIF--PGVCPSFWLYSDIDYS 121 (269)
T ss_pred eE-EeCCE-EEEEEEeccCCCcccccccccCCCCCEeeEEEEecCcceeeEEEEEEECCCCC--CceEeEEEEeccCCCC
Confidence 44 45675 88887443 234588999999999999999865 6 899999999985
Q ss_pred ----C-CCCCeee-eccCCCC---CCCc----eeEEeeeecCCCCC--c--------ceEEEcCCCCCCCcEEEEEEEeC
Q 045763 70 ----G-ANWDEID-FEFLGNV---TGEP----YTLHTNVFSQGNGD--R--------ERQFHLWFDPTTDFHTYSILWNP 126 (267)
Q Consensus 70 ----~-~~~~EID-~E~lG~~---~g~p----~~~~tn~~~~g~g~--~--------~~~~~l~fd~~~dfHtY~i~W~p 126 (267)
+ |.++||| ||.+|.. .+.+ ..+|+.++.++.+. + ...+.+++|++++||+|+|+|+|
T Consensus 122 ~~~~gwp~~GEIDImE~~g~~~~~~~~~~~~~~~~H~~~~~~g~g~w~~~~~~~~~~~~~~~~~~d~~~~fH~y~v~W~~ 201 (269)
T cd02177 122 VANEGEVVYSEIDVVELQQFDWYHQDDIRDMDHNLHAIVKENGQGVWKRPKMYPPTEQLNYHRPFDPSKDFHTYGCNVNQ 201 (269)
T ss_pred cccCCCCCCCeEEEEEEecCCccccccccccceEEEEeEecCCcccccCccccccccceEEccCCCCccCcEEEEEEEeC
Confidence 2 6789999 8888753 1222 35676665555431 1 12455778899999999999999
Q ss_pred CceEEEECCeeEEEEeccccCCCCCCCCCCcEEEEeeeeCC---------CCCCCCCccccCCCCCCEEEEEeEEEEe
Q 045763 127 KRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWNAD---------SWATQGGRIKIDWKYAPFTASYSNFTAD 195 (267)
Q Consensus 127 ~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm~l~lnlw~gg---------~Wat~GG~~~~d~~~aPf~a~~~~~~v~ 195 (267)
++|+|||||++++++.+. +.. .||.|.+++-... .|+ |+. .+.+.+|-.|++|+|||.
T Consensus 202 ~~i~~yvDg~~~~~~~~~------~w~-~~~~~~~~~~~~~p~~~~~~~~~~~--~~~--~~~~~fP~~m~VDyVRv~ 268 (269)
T cd02177 202 DEIIWYVDGVEVGRKPNK------YWH-RPMNVTLSLGLRKPFVKFFDNKNNA--KAR--EKASDFPTSMYVDYVRVW 268 (269)
T ss_pred CEEEEEECCEEEEEEcCC------ccc-cccEEeeccccCcchhhhhccccCC--CCC--CccCcCCceEEEEEEEEe
Confidence 999999999999998642 333 7888888875433 244 333 346789999999999985
No 10
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16. Proteins similar to Streptomyces sioyaensis beta-1,3-glucanase (laminarinase) present in Actinomycetales as well as Peziomycotina. Laminarinases belong to glycosyl hydrolase family 16 and hydrolyze the glycosidic bond of the 1,3-beta-linked glucan, a major component of fungal and plant cell walls and the structural and storage polysaccharides (laminarin) of marine macro-algae. Members of the GH16 family have a conserved jelly roll fold with an active site channel.
Probab=99.97 E-value=1.3e-29 Score=228.93 Aligned_cols=176 Identities=14% Similarity=0.141 Sum_probs=119.6
Q ss_pred CC-eEEecCCCEEEEEEcCCC-----CCeEEEcce--eEe----EEEEEEEEecCCC---CCceEEEEEEeeCC------
Q 045763 12 HG-AKIHDNGKVLTLNLDKSG-----GSGFQSKKE--YLF----GKIDMRIKLVPGY---SAGTVTAYYLSSKG------ 70 (267)
Q Consensus 12 ~~-~~~~~~G~~l~L~ld~~s-----Gsg~~Sk~~--~~Y----G~~eariKlp~g~---s~G~~~Afwl~~~~------ 70 (267)
++ +.+..+|. |.|+..+.. .++|.|+.+ +.| |+||||||+|.+. ..|+||||||++.+
T Consensus 45 ~~n~~v~~dG~-L~I~a~~~~~~~ytSg~i~s~~~~~~~~~gg~~~~EaRik~p~~~~~~~~G~wPAfWll~~~~~~~~~ 123 (259)
T cd02182 45 TANVQLSGNGT-LQITPLRDGSGKWTSGRIETTRTDFAAPPGGKLRVEASIRLGDVPGSNQQGIWPAFWMLGDSYRGNGT 123 (259)
T ss_pred CcCEEEcCCCe-EEEEEEecCCCCEEEEEEEECCccccccCCCcEEEEEEEECCCCcccCCCCcCeeeeccCCCccCCCC
Confidence 44 66654674 888875442 346888654 433 4999999999741 26999999999852
Q ss_pred --CCCCeee-eccCCCCCCCceeEEeeeecCC---CCCcceE-EE-cCCCCCCCcEEEEEEEeC-----CceEEEECCee
Q 045763 71 --ANWDEID-FEFLGNVTGEPYTLHTNVFSQG---NGDRERQ-FH-LWFDPTTDFHTYSILWNP-----KRVIFYADDVP 137 (267)
Q Consensus 71 --~~~~EID-~E~lG~~~g~p~~~~tn~~~~g---~g~~~~~-~~-l~fd~~~dfHtY~i~W~p-----~~I~fyVDG~~ 137 (267)
|..+||| ||..|... . ++.++|... ....+.. .. ....+.++||+|+|+|++ ++|+|||||++
T Consensus 124 ~WP~~GEIDImE~~~~~~---~-~~~t~H~~~~~~~~~~~~~~~~~~~~~~~~~fHtY~veW~~~~~~~~~I~~yvDG~~ 199 (259)
T cd02182 124 NWPACGELDIMENVNGLS---T-GYGTLHCGVAPGGPCNEPTGIGAGTRLCDTGFHTYAVEIDRTNGDAESIRWYLDGVV 199 (259)
T ss_pred CCCccceeeeeeccCCCC---c-eEEEEeeCCCCCCCCccccCcccCCCCCCCCcEEEEEEEccCCCCCCEEEEEECCEE
Confidence 5678999 99998643 2 233344321 1111111 11 011235799999999997 99999999999
Q ss_pred EEEEeccccC---CCCCCCCCCcEEEEeeeeCCCCCCCCCccc-cCCCCCCEEEEEeEEEEe
Q 045763 138 IREFKNLEYL---GIPFPKKQPMRIYSSLWNADSWATQGGRIK-IDWKYAPFTASYSNFTAD 195 (267)
Q Consensus 138 vr~~~~~~~~---g~~~P~~~Pm~l~lnlw~gg~Wat~GG~~~-~d~~~aPf~a~~~~~~v~ 195 (267)
+++++..... .-+.|.++||+|||||++||+|+ |.+. ..-...|..|.||+|||.
T Consensus 200 ~~t~~~~~~~~~~~~~~~~~~p~ylIlN~avgg~w~---~~~~~~~~~~~p~~m~VDyVRVy 258 (259)
T cd02182 200 YHTVTGARVGDETTWQALAHHPLFIILNVAVGGNWP---GAPNGNTATGSGSAMEVDYVAVY 258 (259)
T ss_pred EEEEehhhcCCCccccCcCCCCeEEEEEEEEeCCcC---CCCCcccccCCCceEEEEEEEEe
Confidence 9999864221 12234569999999999999998 3321 112457899999999986
No 11
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16. KRE6 is a Saccharomyces cerevisiae glucanase that participates in the synthesis of beta-1,6-glucan, a major structural component of the cell wall. It is a golgi membrane protein required for normal beta-1,6-glucan levels in the cell wall. KRE6 is closely realted to laminarinase, a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.
Probab=99.97 E-value=1.4e-29 Score=232.64 Aligned_cols=175 Identities=20% Similarity=0.188 Sum_probs=118.7
Q ss_pred eEEecCCCEEEEEEcCC-------CCCeEEE--cceeEeEEEEEEEEecCC-CCCceEEEEEEeeCC-------------
Q 045763 14 AKIHDNGKVLTLNLDKS-------GGSGFQS--KKEYLFGKIDMRIKLVPG-YSAGTVTAYYLSSKG------------- 70 (267)
Q Consensus 14 ~~~~~~G~~l~L~ld~~-------sGsg~~S--k~~~~YG~~eariKlp~g-~s~G~~~Afwl~~~~------------- 70 (267)
+.+ .+|. |.|++.+. +.+.|.| |+.|+|||||||||||.+ ...|+||||||+++.
T Consensus 43 v~v-~~G~-L~I~a~~~~~~~~~ytSg~i~T~~k~~f~yG~~EaR~klp~~~~~~G~WPAfWmlg~~~~~~~~~~~~~~W 120 (295)
T cd02180 43 VTT-INGS-LRITMDQFRNHGLNFRSGMLQSWNKLCFTGGYIEASASLPGKPDVSGLWPAVWTMGNLGRPGYLATTEGVW 120 (295)
T ss_pred eEe-cCCe-EEEEEEeecCCCCCEEEEEEEECCcceeeCCEEEEEEECCCCCCCCCcceeeecccccccccccccccCCC
Confidence 444 4564 88887543 2356888 788999999999999973 137999999999841
Q ss_pred CC------CCeee-eccCCCCCC-Cce---eE----------------EeeeecC------CC-CCcce-EE----EcCC
Q 045763 71 AN------WDEID-FEFLGNVTG-EPY---TL----------------HTNVFSQ------GN-GDRER-QF----HLWF 111 (267)
Q Consensus 71 ~~------~~EID-~E~lG~~~g-~p~---~~----------------~tn~~~~------g~-g~~~~-~~----~l~f 111 (267)
|. .+||| ||.+|.+.. ... .+ |..+|.. .. ++..+ .. .+.-
T Consensus 121 P~~~~~~~~GEIDImE~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 200 (295)
T cd02180 121 PYSYDGRGAPEIDIIEAQVGNGLGIGQVSQSLQVAPFDAWYRPDYSSDFVTIYNDTTTIMNTYTGGVFQQAISCVTRLND 200 (295)
T ss_pred CcccccCCCCcEEEEeeecCCCCcCceEeeEEeeccccccccCCCCccceEEecCcccccccccCCccccccccccccCC
Confidence 32 48999 999985320 101 11 1111211 00 11000 01 1111
Q ss_pred ----CCCCCcEEEEEEEeC-----CceEEEECCeeEEEEeccccC--C----CCCCCCCCcEEEEeeeeCCCCCCCCCcc
Q 045763 112 ----DPTTDFHTYSILWNP-----KRVIFYADDVPIREFKNLEYL--G----IPFPKKQPMRIYSSLWNADSWATQGGRI 176 (267)
Q Consensus 112 ----d~~~dfHtY~i~W~p-----~~I~fyVDG~~vr~~~~~~~~--g----~~~P~~~Pm~l~lnlw~gg~Wat~GG~~ 176 (267)
...++||||+|+|+| ++|+|||||+++++++..... + ..+| ++||+|||||++||+|+ |.
T Consensus 201 ~~~~~~~~~fHtY~veW~~~~~~~~~I~wyvDg~~~~~~~~~~~~~~~~~~~~~~~-~~P~ylILNlAvGg~w~---g~- 275 (295)
T cd02180 201 SWYPGNGNEFQTYGFEYRPDDEDDGYITWFVDDEPTWTIYAKALGPNGNIGWRIIP-EEPMYIILNLGISSNFQ---DI- 275 (295)
T ss_pred ccccccCCCcEEEEEEEecCCCCCCEEEEEECCEEEEEEehHHcCCcccccccccC-CCCeEEEEEEEeccccC---CC-
Confidence 135789999999999 899999999999999864321 1 2345 59999999999999997 43
Q ss_pred ccCCCCCCEEEEEeEEEEe
Q 045763 177 KIDWKYAPFTASYSNFTAD 195 (267)
Q Consensus 177 ~~d~~~aPf~a~~~~~~v~ 195 (267)
+.+-...|..|+||+|||.
T Consensus 276 ~~~~~~~P~~m~VDyVRVY 294 (295)
T cd02180 276 DWDELQFPATMRIDYVRVY 294 (295)
T ss_pred CcccCCCCCEEEEEEEEEE
Confidence 2344567999999999996
No 12
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16. Beta-GRP (beta-1,3-glucan recognition protein) is one of several pattern recognition receptors (PRRs), also referred to as biosensor proteins, that complexes with pathogen-associated beta-1,3-glucans and then transduces signals necessary for activation of an appropriate innate immune response. They are present in insects and lack all catalytic residues. This subgroup also contains related proteins of unknown function that still contain the active site. Their structures adopt a jelly roll fold with a deep active site channel harboring the catalytic residues, like those of other glycosyl hydrolase family 16 members.
Probab=99.96 E-value=3.4e-29 Score=232.80 Aligned_cols=133 Identities=16% Similarity=0.150 Sum_probs=98.9
Q ss_pred CeEEE--cceeEeEEEEEEEEecCCCCCceEEEEEEeeCC-------CCCCeee-eccCCCCCC----C---ceeEEeee
Q 045763 33 SGFQS--KKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKG-------ANWDEID-FEFLGNVTG----E---PYTLHTNV 95 (267)
Q Consensus 33 sg~~S--k~~~~YG~~eariKlp~g~s~G~~~Afwl~~~~-------~~~~EID-~E~lG~~~g----~---p~~~~tn~ 95 (267)
++|.| |+.|+|||||+|||||.| .|+||||||++.+ |..+||| ||.+||... . ...+|...
T Consensus 99 ari~Tk~~f~f~YGrvEvRAKlP~G--dglWPAiWmlP~~~~yg~w~P~sGEIDImE~~Gn~~~~~~g~~~~~~~l~~g~ 176 (321)
T cd02179 99 ARINTKNSFAFKYGRVEIRAKLPKG--DWIYPELLLEPVNNYYGSSDYASGQIRIAFARGNAVLRADGTDIGGKKLYGGP 176 (321)
T ss_pred eeEEECCcEeEeccEEEEEEEccCC--CCcccceeecccccccCCCCCCCCeEEEEEeCCCCccccCCceeccceEEccc
Confidence 45777 588999999999999999 7999999999863 4679999 999998521 0 12344444
Q ss_pred ecCCCC-Ccc---eEEEcCCCCCCCcEEEEEEEeCCceEEEECCeeEEEEecccc----------------CCCCCCCCC
Q 045763 96 FSQGNG-DRE---RQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLEY----------------LGIPFPKKQ 155 (267)
Q Consensus 96 ~~~g~g-~~~---~~~~l~fd~~~dfHtY~i~W~p~~I~fyVDG~~vr~~~~~~~----------------~g~~~P~~~ 155 (267)
+..... .+. .......+.+++||+|+|+|+|++|+|||||++++++..... .....|+++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~ddFHtY~leWtpd~I~f~VDg~~~~~~~~~~~~~~~~~~~~~~~~w~~g~~~aPFD~ 256 (321)
T cd02179 177 VLTDAEPHRSANLKTKINNELWSDDFHVYTLEWKPDGITLMVDGEEYGEIEPGEGGYSEAANNPAASRWLGGTVMAPFDK 256 (321)
T ss_pred ccCCCcccccccccccCCCCccccCcEEEEEEEeCCEEEEEECCEEEEEEecCcCccccccccccCccccccCccCCCCC
Confidence 432211 111 011112356789999999999999999999999999986321 123468999
Q ss_pred CcEEEEeeeeCC
Q 045763 156 PMRIYSSLWNAD 167 (267)
Q Consensus 156 Pm~l~lnlw~gg 167 (267)
|++|+|||++||
T Consensus 257 ~FyliLNlAVGG 268 (321)
T cd02179 257 EFYLSLGVGVGG 268 (321)
T ss_pred CeEEEEEEEecC
Confidence 999999999998
No 13
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16. Subgroup of glucanases of unknown function that are related to beta-GRP (beta-1,3-glucan recognition protein), but contain active site residues. Beta-GRPs are one group of pattern recognition receptors (PRRs), also referred to as biosensor proteins, that complexes with pathogen-associated beta-1,3-glucans and then transduces signals necessary for activation of an appropriate innate immune response. Beta-GRPs are present in insects and lack all catalytic residues. This subgroup contains related proteins that still contain the active site and are widely distributed in eukaryotes. Their structures adopt a jelly roll fold with a deep active site channel harboring the catalytic residues, like those of other glycosyl hydrolase family 16 members.
Probab=99.96 E-value=1.3e-28 Score=229.81 Aligned_cols=136 Identities=21% Similarity=0.275 Sum_probs=103.4
Q ss_pred CeEEE--cceeEeEEEEEEEEecCCCCCceEEEEEEeeCC------CCCCeee-eccCCCCCCCc-------eeEEeeee
Q 045763 33 SGFQS--KKEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKG------ANWDEID-FEFLGNVTGEP-------YTLHTNVF 96 (267)
Q Consensus 33 sg~~S--k~~~~YG~~eariKlp~g~s~G~~~Afwl~~~~------~~~~EID-~E~lG~~~g~p-------~~~~tn~~ 96 (267)
+.|.| |+.|+|||||||||||.| .|+||||||++.+ |..+||| ||.+|+....+ ..++.++|
T Consensus 102 gri~T~~kf~f~YGrvE~RaKlP~G--~g~WPAfWmlp~~~~yg~WP~sGEIDImE~~Gn~~~~~~~~~~g~~~v~~tlH 179 (330)
T cd08024 102 ARLRTKNSFSFKYGRVEVRAKLPTG--DWLWPAIWMLPRDNVYGGWPRSGEIDIMESRGNRPLYDGGEAIGINSVGSTLH 179 (330)
T ss_pred EEEEeCCccceeceEEEEEEECCCC--CccceeeeecCCccccCCCCCCCcEEEEEEeCCCcccccccccCcceEEEEEE
Confidence 45777 788999999999999999 7999999999963 6789999 99999854221 23555566
Q ss_pred cCCCCC----cc---eEEEcCCCCCCCcEEEEEEEeCCceEEEECCeeEEEEeccc-------------------cCCCC
Q 045763 97 SQGNGD----RE---RQFHLWFDPTTDFHTYSILWNPKRVIFYADDVPIREFKNLE-------------------YLGIP 150 (267)
Q Consensus 97 ~~g~g~----~~---~~~~l~fd~~~dfHtY~i~W~p~~I~fyVDG~~vr~~~~~~-------------------~~g~~ 150 (267)
...... +. .......+.+++||+|+|+|+|++|+|||||+++++++... ..+..
T Consensus 180 ~g~~~~~~~~~~~~~~~~~~~~~~~~~FHtY~veWtpd~I~fyVDG~~~~~v~~~~~~~w~~g~~~~~~~~~~w~~~~~~ 259 (330)
T cd08024 180 WGPDPGQNRYTKTTGKRSDSGGDFADDFHTYGLDWTPDHIRFYVDDRLILTLDVPGQGFWEFGGFSGTPIDNPWAGGGKM 259 (330)
T ss_pred eCCCCCCCccccccceeccCCCCcccCCEEEEEEEeCCEEEEEECCEEEEEEecCCCCceeeccccccccCCcccccCcC
Confidence 432111 11 11122245678899999999999999999999999998521 11245
Q ss_pred CCCCCCcEEEEeeeeCCCCC
Q 045763 151 FPKKQPMRIYSSLWNADSWA 170 (267)
Q Consensus 151 ~P~~~Pm~l~lnlw~gg~Wa 170 (267)
+|+++|++|+|||++||.|.
T Consensus 260 aPFd~~fyliLNvAVGG~~~ 279 (330)
T cd08024 260 APFDQEFYLILNVAVGGTNG 279 (330)
T ss_pred CCCCCCEEEEEEEEecCCCC
Confidence 68999999999999999885
No 14
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
Probab=99.92 E-value=2.9e-24 Score=201.75 Aligned_cols=157 Identities=24% Similarity=0.430 Sum_probs=129.3
Q ss_pred ccceeeCCC-eEEecCCCEEEEEEcCC-------CCCeEEEcce--eEeEEEEEEEEecCCCCCceEEEEEEeeC----C
Q 045763 5 DFEITWGHG-AKIHDNGKVLTLNLDKS-------GGSGFQSKKE--YLFGKIDMRIKLVPGYSAGTVTAYYLSSK----G 70 (267)
Q Consensus 5 ~~~~~w~~~-~~~~~~G~~l~L~ld~~-------sGsg~~Sk~~--~~YG~~eariKlp~g~s~G~~~Afwl~~~----~ 70 (267)
..+++|... +.+..+| .|.|.+++. +++.++|..+ |+||++|+|||+|.+ .|+||||||++. +
T Consensus 71 ~~~~~w~~~~~~lt~~~-~l~l~~~~~~~~~~~y~sG~l~T~~r~~~~YG~~Evrak~~~~--~G~wpafw~~~g~~~dg 147 (355)
T COG2273 71 TKNLTWYVSNVVLTIGG-TLELDIEKFKINDRDYRSGMLTTYNRFCFTYGTYEVRAKLPLV--SGLWPAFWTLTGLSRDG 147 (355)
T ss_pred ccccceeecceeEeeCC-eeeeeechhcccccccccceEEecCcceEeeeEEEEEeccCCC--cccceeeEeccCcccCC
Confidence 456788777 7666654 688887542 3456888655 999999999999977 999999999984 4
Q ss_pred CCCCeeeeccCCCCCCCceeEEeeeecCCCCCcceEEEcCC-CCCCCcEEEEEEEeCCceEEEECCeeEEEEeccccCCC
Q 045763 71 ANWDEIDFEFLGNVTGEPYTLHTNVFSQGNGDRERQFHLWF-DPTTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGI 149 (267)
Q Consensus 71 ~~~~EID~E~lG~~~g~p~~~~tn~~~~g~g~~~~~~~l~f-d~~~dfHtY~i~W~p~~I~fyVDG~~vr~~~~~~~~g~ 149 (267)
..++|||+|++|++.. +..+|+|.+.++.++.+....+.+ +..++||||.++|.++.|+|||||++++++... .
T Consensus 148 ~wp~e~d~e~lgg~~~-~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~fhty~~~W~~~~i~Wyvdg~~~~~~~~p----~ 222 (355)
T COG2273 148 GWPDEIDIEDLGGQST-NTVIQTNHYQGGGGGTSKLVDHPNPDAIDGFHTYAFLWGEDSISWYVDGAPVATATKP----D 222 (355)
T ss_pred CCCcceeeeeecCCCc-ccceEeeeeccCCCCceecccccCCCcccccccceeeccCCeEEEEEcceEeeEEecc----c
Confidence 6789999999997653 345999999998888777777777 888999999999999999999999999999853 2
Q ss_pred CCCCCCCcEEEEeeeeCCCCC
Q 045763 150 PFPKKQPMRIYSSLWNADSWA 170 (267)
Q Consensus 150 ~~P~~~Pm~l~lnlw~gg~Wa 170 (267)
..|. .||++++|||.++.+.
T Consensus 223 ~~~~-~p~y~~~nl~~~~~~~ 242 (355)
T COG2273 223 YIPQ-IPFYVLVNLWMGGYAG 242 (355)
T ss_pred cCcC-CcceeEEeecccCccC
Confidence 3476 9999999999998765
No 15
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET). Xyloglucan is the predominant hemicellulose in the cell walls of most dicotyledons. With cellulose, it forms a network that strengthens the cell wall. XET catalyses the splitting of xyloglucan chains and the linking of the newly generated reducing end to the non-reducing end of another xyloglucan chain, thereby loosening the cell wall []. ; GO: 0016762 xyloglucan:xyloglucosyl transferase activity, 0006073 cellular glucan metabolic process, 0005618 cell wall, 0048046 apoplast; PDB: 1UMZ_A 1UN1_B 2VH9_B 2UWC_A 2UWB_B 2UWA_C.
Probab=99.82 E-value=7.7e-21 Score=131.20 Aligned_cols=42 Identities=50% Similarity=1.129 Sum_probs=36.1
Q ss_pred cccccc---CCHHHHHHHHHHhhcCeEEeccCCCCCCCCCCCCCC
Q 045763 221 VWLRHE---LDIAKKRKMRWVEKNHMVYDYCKDHKRFPHGPPLEC 262 (267)
Q Consensus 221 ~~~~~~---l~~~~~~~~~~~~~~~~~y~yc~d~~r~~~~~p~ec 262 (267)
.||++. |++.|+++|+|||+||||||||+|++|||.++|+||
T Consensus 7 ~w~~~~~~~L~~~q~~~m~wvr~~ymiYdYC~D~~Rfp~~~P~EC 51 (51)
T PF06955_consen 7 SWWNQPYAQLSAKQRRQMRWVRRNYMIYDYCTDTKRFPNPLPPEC 51 (51)
T ss_dssp SGGCSCCCS--HHHHHHHHHHHHHCEEEEGGG-TTT-SGCGSTTH
T ss_pred ccccCcccCCCHHHHHHHHHHHHcCeEecccCCCCcCCCCCCCCC
Confidence 788875 999999999999999999999999999998789999
No 16
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1. Beta1,6-Glucan is a key component of the yeast cell wall, interconnecting cell wall proteins, beta1,3-glucan, and chitin. It has been postulated that the synthesis of beta1,6-glucan begins in the endoplasmic reticulum with the formation of protein-bound primer structures and that these primer structures are extended in the Golgi complex by two putative glucosyltransferases that are functionally redundant, Kre6 and Skn1. This is followed by maturation steps at the cell surface and by coupling to other cell wall macromolecules [].
Probab=99.64 E-value=1.8e-15 Score=146.46 Aligned_cols=190 Identities=24% Similarity=0.361 Sum_probs=123.6
Q ss_pred CCC-eEEecCCCEEEEEEcCCC--C----Ce-EEE--cceeEeEEEEEEEEecCC-CCCceEEEEEEeeC----------
Q 045763 11 GHG-AKIHDNGKVLTLNLDKSG--G----SG-FQS--KKEYLFGKIDMRIKLVPG-YSAGTVTAYYLSSK---------- 69 (267)
Q Consensus 11 ~~~-~~~~~~G~~l~L~ld~~s--G----sg-~~S--k~~~~YG~~eariKlp~g-~s~G~~~Afwl~~~---------- 69 (267)
.++ |+. .+| .|+|++++.. + || ++| |+=|+-|++|++++||.. +..|+|||||+|++
T Consensus 159 ~p~~vtt-~~G-~l~i~~~~~~~~~~~y~sgm~qsWNkfCftgG~~e~~~~lPg~~~~~G~WP~~W~mGNLgRagy~ast 236 (504)
T PF03935_consen 159 DPDAVTT-ENG-SLVITLDAFPNHNLNYRSGMLQSWNKFCFTGGYIEVSASLPGSPDVSGLWPAFWTMGNLGRAGYGAST 236 (504)
T ss_pred cCCCcEe-eCC-EEEEEEEeeeccceeEecchhhhhhhhhcCCcEEEEEEECCCCCcCCCcCchhhhccccCcccccccc
Confidence 445 543 455 5899987532 2 33 566 888999999999999864 36799999999974
Q ss_pred -C-----------------------------------------------CCCCeee-eccCCCCC---CC-ceeEEeee-
Q 045763 70 -G-----------------------------------------------ANWDEID-FEFLGNVT---GE-PYTLHTNV- 95 (267)
Q Consensus 70 -~-----------------------------------------------~~~~EID-~E~lG~~~---g~-p~~~~tn~- 95 (267)
+ ....||| ||...... |. ...+|..-
T Consensus 237 ~g~WPySYd~Cd~g~~~nQt~~~glS~lpgqrlsaCtc~gedhp~p~~GRgAPEIDilE~~~~~~~~~g~~SqS~Q~AP~ 316 (504)
T PF03935_consen 237 DGMWPYSYDSCDVGTTPNQTSPDGLSYLPGQRLSACTCPGEDHPGPGVGRGAPEIDILEAQVGAGPGVGVVSQSLQVAPF 316 (504)
T ss_pred CceecccccccCcccccCccccCccccCCCCcCcCCCCCCCcCCCCCCCCCCCceeEEeeeecccccccccccceeeccc
Confidence 0 0236999 89764321 10 01222211
Q ss_pred -------------ecCCC-------CCc-ceEEE----c---CC--CCCCCcEEEEEEEeCC-----ceEEEECCeeEEE
Q 045763 96 -------------FSQGN-------GDR-ERQFH----L---WF--DPTTDFHTYSILWNPK-----RVIFYADDVPIRE 140 (267)
Q Consensus 96 -------------~~~g~-------g~~-~~~~~----l---~f--d~~~dfHtY~i~W~p~-----~I~fyVDG~~vr~ 140 (267)
+.... |+. .+.+. + ++ ....+||+|++||.|. .|+|+|||+++.+
T Consensus 317 d~~y~~~~~~~~i~~~~~T~~N~Y~Gg~~QqAiSa~t~ln~~~Y~~~~~~~f~~YgfEy~Pg~~~~GYItW~vdg~~twt 396 (504)
T PF03935_consen 317 DIWYRPDYDFYEIYNPSITQMNTYTGGVYQQAISALTQLNNDWYEEEDGGCFQTYGFEYKPGDGDDGYITWFVDGEPTWT 396 (504)
T ss_pred ccCCCCCCCceEEeCCCCceeccccChhhhhhhhcCcccCccccccCCCCceEEEEEEEEeCCCCCeEEEEEECCEEEEE
Confidence 10000 010 11111 1 11 1237899999999874 8999999999999
Q ss_pred EeccccC------CCCCCCCCCcEEEEeeeeCCCCCCCCCccccCCC--CCCEEEEEeEEEEeeeecCCCCCcCCCCC
Q 045763 141 FKNLEYL------GIPFPKKQPMRIYSSLWNADSWATQGGRIKIDWK--YAPFTASYSNFTADACIWAFGASSCDTNS 210 (267)
Q Consensus 141 ~~~~~~~------g~~~P~~~Pm~l~lnlw~gg~Wat~GG~~~~d~~--~aPf~a~~~~~~v~~c~~~~~~~~c~~~~ 210 (267)
+...... ...+|. .||+||+||....+|+ . +||. ..|..|.||+|||..=... ..-.|.+..
T Consensus 397 i~a~Al~~~~~I~~R~Ip~-EPMyIIlNlgmS~sf~----~--vd~~~L~FP~~M~IDYVRVYQ~~~~-~~vgCDP~~ 466 (504)
T PF03935_consen 397 INAEALGPNPNIGQRPIPE-EPMYIILNLGMSSSFG----Y--VDWNHLCFPATMRIDYVRVYQPEDA-INVGCDPPD 466 (504)
T ss_pred EEhhhcCCCCCcCccccCc-CCceeeeccccccccC----c--cccccccccceEEEeEEEEeccCCC-CeeeeCCCC
Confidence 9865421 245787 9999999999999996 2 5665 4789999999999764321 234576543
No 17
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A. Group of fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A. Lam16A belongs to the 'nonspecific' 1,3(4)-beta-glucanase subfamily, although beta-1,6 branching and beta-1,4 bonds specifically define where Lam16A hydrolyzes its substrates, like curdlan (beta-1,3-glucan), lichenin (beta-1,3-1,4-mixed linkage glucan), and laminarin (beta-1,6-branched-1,3-glucan).
Probab=99.49 E-value=3.2e-13 Score=123.65 Aligned_cols=149 Identities=24% Similarity=0.343 Sum_probs=96.1
Q ss_pred cCCCEEEEEEcCCCC---------CeEEEcceeEeEEEEEEE-EecCCCCCceEEEEEEeeCC-CCCCeee-eccCCCCC
Q 045763 18 DNGKVLTLNLDKSGG---------SGFQSKKEYLFGKIDMRI-KLVPGYSAGTVTAYYLSSKG-ANWDEID-FEFLGNVT 85 (267)
Q Consensus 18 ~~G~~l~L~ld~~sG---------sg~~Sk~~~~YG~~eari-Klp~g~s~G~~~Afwl~~~~-~~~~EID-~E~lG~~~ 85 (267)
++| .|.|.+|..+. ++|.||..|.+|++|+|+ |||.+ .|+||||||++.+ |..+||| ||.++...
T Consensus 47 ~~g-~l~i~vd~t~~~~~~~gr~S~ri~sk~~f~~g~~~~~~~~~P~g--~G~WPAfW~~g~~WP~~GEIDImE~vn~~~ 123 (293)
T cd02181 47 NSG-NVYLGVDSTTTLPSGAGRNSVRIESKKTYNTGLFIADIAHMPGG--CGTWPAFWTVGPNWPNGGEIDIIEGVNLQT 123 (293)
T ss_pred eCC-eEEEEEeceeccCCCCCceEEEEEEeceeecceEEEEhhhCCCC--CCccchhhhcCCCCCCCCcEEEEeccCCCC
Confidence 445 48888876431 359999999999999998 99998 8999999999876 8889999 99998644
Q ss_pred CCceeEEeee----ecCC--CC-------------Ccc--------eEEEcCCCCCCCcEEEEEEEeCCceEEEECC---
Q 045763 86 GEPYTLHTNV----FSQG--NG-------------DRE--------RQFHLWFDPTTDFHTYSILWNPKRVIFYADD--- 135 (267)
Q Consensus 86 g~p~~~~tn~----~~~g--~g-------------~~~--------~~~~l~fd~~~dfHtY~i~W~p~~I~fyVDG--- 135 (267)
....++||.- -..+ .+ +.. ..+...|+ ..+=-.|+++|+.+.|..+.=-
T Consensus 124 ~n~~tlHt~~gC~i~~~~~~tg~~~~~nC~~~~~~n~GC~v~~~~~~syG~~FN-~~GGGvyA~ew~~~~I~vWff~R~~ 202 (293)
T cd02181 124 SNQMTLHTGPGCTISNSGSFTGTVTTTNCDVNQNGNAGCGVTSTSTNSYGAGFN-AAGGGVYAMEWTSDGIKVWFFPRGS 202 (293)
T ss_pred ceEEEEecCCCEEcCCCCCccCcccCCCcCCCCCCCCCceeecCCCCccccccc-cCCCcEEEEEEccCcEEEEEecCCC
Confidence 3334566531 0110 00 000 11112222 3445799999999998766532
Q ss_pred eeEEEEeccccC---C---CCCCCC--------CCcEEEEeeeeCCCCC
Q 045763 136 VPIREFKNLEYL---G---IPFPKK--------QPMRIYSSLWNADSWA 170 (267)
Q Consensus 136 ~~vr~~~~~~~~---g---~~~P~~--------~Pm~l~lnlw~gg~Wa 170 (267)
+|--.......+ | ..||.. ++++|++|+-.=|+||
T Consensus 203 iP~di~~~~pdPs~WG~P~A~f~~~~Cdi~~~F~~~~iVfn~tfCGdwA 251 (293)
T cd02181 203 IPADITSGSPDPSTWGTPAASFPGSSCDIDSFFKDQRIVFDTTFCGDWA 251 (293)
T ss_pred CCcccccCCCCCcccCcccccCCCCCCChhHhcccCEEEEEeecccccc
Confidence 221111111110 1 234421 6899999999999999
No 18
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A ....
Probab=92.88 E-value=2.4 Score=33.21 Aligned_cols=66 Identities=12% Similarity=0.182 Sum_probs=40.0
Q ss_pred CCCcEEEEEEEeCCceEEEECCeeEEEEeccccCCCCCCCCCCcEEEEeeeeCCCCCCCCCccccCCCCCCEEEEEeEEE
Q 045763 114 TTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWNADSWATQGGRIKIDWKYAPFTASYSNFT 193 (267)
Q Consensus 114 ~~dfHtY~i~W~p~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm~l~lnlw~gg~Wat~GG~~~~d~~~aPf~a~~~~~~ 193 (267)
...||..++.|....+.+||||+++.+...... ...+...++. .|+.. ....+|...++.++
T Consensus 84 ~~~W~~l~~~~~~~~~~lyvnG~~~~~~~~~~~--~~~~~~~~~~------iG~~~----------~~~~~~~g~i~~~~ 145 (157)
T PF13385_consen 84 DNKWHHLALTYDGSTVTLYVNGELVGSSTIPSN--ISLNSNGPLF------IGGSG----------GGSSPFNGYIDDLR 145 (157)
T ss_dssp TT-EEEEEEEEETTEEEEEETTEEETTCTEESS--SSTTSCCEEE------ESS-S----------TT--B-EEEEEEEE
T ss_pred CCCEEEEEEEEECCeEEEEECCEEEEeEeccCC--cCCCCcceEE------EeecC----------CCCCceEEEEEEEE
Confidence 488999999999999999999998865432211 1111112222 23222 23668999999999
Q ss_pred Eeee
Q 045763 194 ADAC 197 (267)
Q Consensus 194 v~~c 197 (267)
|...
T Consensus 146 i~~~ 149 (157)
T PF13385_consen 146 IYNR 149 (157)
T ss_dssp EESS
T ss_pred EECc
Confidence 8654
No 19
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function.; PDB: 3IMM_B 3NMB_A 3S5Q_A 3OSD_A 3HBK_A 3H3L_A 3U1X_A.
Probab=91.27 E-value=2.2 Score=35.54 Aligned_cols=32 Identities=19% Similarity=0.526 Sum_probs=28.5
Q ss_pred CCCCcEEEEEEEeCCceEEEECCeeEEEEecc
Q 045763 113 PTTDFHTYSILWNPKRVIFYADDVPIREFKNL 144 (267)
Q Consensus 113 ~~~dfHtY~i~W~p~~I~fyVDG~~vr~~~~~ 144 (267)
+..+||++.|.-..++|+.+|||++|-++...
T Consensus 125 ~~~~W~~~~I~~~g~~i~v~vnG~~v~~~~d~ 156 (185)
T PF06439_consen 125 PPGEWNTVRIVVKGNRITVWVNGKPVADFTDP 156 (185)
T ss_dssp -TTSEEEEEEEEETTEEEEEETTEEEEEEETT
T ss_pred CCCceEEEEEEEECCEEEEEECCEEEEEEEcC
Confidence 45789999999999999999999999888754
No 20
>PF09264 Sial-lect-inser: Vibrio cholerae sialidase, lectin insertion; InterPro: IPR015344 This domain is predominantly found in Vibrio cholerae sialidase, and adopt a beta sandwich structure consisting of 12-14 strands arranged in two beta-sheets. It binds to lectins with high affinity helping to target the protein to sialic acid-rich environments, thereby enhancing the catalytic efficiency of the enzyme []. ; PDB: 1W0P_A 1W0O_A 1KIT_A 2W68_B.
Probab=88.39 E-value=0.93 Score=39.39 Aligned_cols=100 Identities=23% Similarity=0.347 Sum_probs=52.9
Q ss_pred CCCCeEEEcce---eEeE-EEEEEEEecCCCCCceEEEEEEeeCCCCCCeeeeccCCCCCCCceeEEeeeecCCCCCcce
Q 045763 30 SGGSGFQSKKE---YLFG-KIDMRIKLVPGYSAGTVTAYYLSSKGANWDEIDFEFLGNVTGEPYTLHTNVFSQGNGDRER 105 (267)
Q Consensus 30 ~sGsg~~Sk~~---~~YG-~~eariKlp~g~s~G~~~Afwl~~~~~~~~EID~E~lG~~~g~p~~~~tn~~~~g~g~~~~ 105 (267)
-+|+++.||.. -.+| +....||+..| |..+-.+.-+. ..--++|-.-. .|. |-. .-+|.+. ..
T Consensus 16 w~gse~ys~~~~~~S~~gW~ls~~~RV~~G---~~n~~yyAnG~--~r~l~~lsvn~--sG~---LvA--~L~g~ss-~~ 82 (198)
T PF09264_consen 16 WGGSELYSKQTELNSQQGWSLSWESRVVSG---GCNTNYYANGS--KRYLPILSVNE--SGS---LVA--ELEGQSS-NT 82 (198)
T ss_dssp TTEEEEECCCHHHHCCC-EEEEEEEEEEEE---S-EEEEEEESS--EEEEEEEEE-T--TS----EEE--EETTS-S--E
T ss_pred cccchhhhhhhhhhhhcCcceeeeEEEecC---cceeEEEcCCc--eEEEEEEEEcC--CCC---EEE--EEecCCC-cE
Confidence 57888888654 2477 68888888876 55554443221 11111111110 010 111 1111111 12
Q ss_pred EEEcCCCCCCCcEEEEEEEeC--CceEEEECCeeEEEEe
Q 045763 106 QFHLWFDPTTDFHTYSILWNP--KRVIFYADDVPIREFK 142 (267)
Q Consensus 106 ~~~l~fd~~~dfHtY~i~W~p--~~I~fyVDG~~vr~~~ 142 (267)
.+.+.-..-.+||.|.|.-.| ..-.|||||++|+++.
T Consensus 83 ~~~~~~~di~gyH~Y~i~~~p~~~tASfy~DG~lI~tw~ 121 (198)
T PF09264_consen 83 LLATTGADIHGYHKYEIVFSPLTNTASFYFDGTLIATWS 121 (198)
T ss_dssp EEE-CHHHHCSEEEEEEEEETTTTEEEEEETTEEEEEE-
T ss_pred EEecccccccceeEEEEEecCCCCceEEEECCEEEeecc
Confidence 233321113579999999988 8899999999999863
No 21
>smart00210 TSPN Thrombospondin N-terminal -like domains. Heparin-binding and cell adhesion domain of thrombospondin
Probab=88.14 E-value=8.1 Score=32.91 Aligned_cols=87 Identities=18% Similarity=0.229 Sum_probs=48.5
Q ss_pred EEEEEEecCCCCCceEEEEEEeeCCCCCCeeeeccCCCCCCCceeEEeeeecCCCCCcceEEEcC-C-CCCCCcEEEEEE
Q 045763 46 IDMRIKLVPGYSAGTVTAYYLSSKGANWDEIDFEFLGNVTGEPYTLHTNVFSQGNGDRERQFHLW-F-DPTTDFHTYSIL 123 (267)
Q Consensus 46 ~eariKlp~g~s~G~~~Afwl~~~~~~~~EID~E~lG~~~g~p~~~~tn~~~~g~g~~~~~~~l~-f-d~~~dfHtY~i~ 123 (267)
|.+.+|..+. +.|+.-++.-. + ...++-++.-|.. + .+.. +..+..+..+..... . -....||..++.
T Consensus 56 i~~~~r~~~~-~~g~L~si~~~-~--~~~~l~v~l~g~~---~-~~~~--~~~~~~g~~~~~~f~~~~l~dg~WH~lal~ 125 (184)
T smart00210 56 LLTTFRQTPK-SRGVLFAIYDA-Q--NVRQFGLEVDGRA---N-TLLL--RYQGVDGKQHTVSFRNLPLADGQWHKLALS 125 (184)
T ss_pred EEEEEEeCCC-CCeEEEEEEcC-C--CcEEEEEEEeCCc---c-EEEE--EECCCCCcEEEEeecCCccccCCceEEEEE
Confidence 6677777543 35555554432 1 2334445544431 1 2222 221222222222111 1 235789999999
Q ss_pred EeCCceEEEECCeeEEEEe
Q 045763 124 WNPKRVIFYADDVPIREFK 142 (267)
Q Consensus 124 W~p~~I~fyVDG~~vr~~~ 142 (267)
+..++|++|||++++.+..
T Consensus 126 V~~~~v~LyvDC~~~~~~~ 144 (184)
T smart00210 126 VSGSSATLYVDCNEIDSRP 144 (184)
T ss_pred EeCCEEEEEECCcccccee
Confidence 9999999999999987654
No 22
>smart00560 LamGL LamG-like jellyroll fold domain.
Probab=87.82 E-value=12 Score=29.81 Aligned_cols=70 Identities=10% Similarity=0.117 Sum_probs=44.2
Q ss_pred CCCCcEEEEEEEeC--CceEEEECCeeEEEEeccccCCCCCCCCCCcEEEEeeeeCCCCCCCCCccccCCCCCCEEEEEe
Q 045763 113 PTTDFHTYSILWNP--KRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWNADSWATQGGRIKIDWKYAPFTASYS 190 (267)
Q Consensus 113 ~~~dfHtY~i~W~p--~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm~l~lnlw~gg~Wat~GG~~~~d~~~aPf~a~~~ 190 (267)
+...||...+.++. .+|.+||||+++.+.... ..+...|+.|-..... ++ ....+|.-.++
T Consensus 59 ~~~~W~hva~v~d~~~g~~~lYvnG~~~~~~~~~-----~~~~~~~~~iG~~~~~-------~~-----~~~~~f~G~Id 121 (133)
T smart00560 59 WIGVWVHLAGVYDGGAGKLSLYVNGVEVATSETQ-----PSPSSGNLPQGGRILL-------GG-----AGGENFSGRLD 121 (133)
T ss_pred CCCCEEEEEEEEECCCCeEEEEECCEEccccccC-----CcccCCceEEeeeccC-------CC-----CCCCCceEEee
Confidence 44789999999998 799999999988644321 1222233333211111 11 12358889999
Q ss_pred EEEEeeeec
Q 045763 191 NFTADACIW 199 (267)
Q Consensus 191 ~~~v~~c~~ 199 (267)
.++|..++-
T Consensus 122 evriy~~aL 130 (133)
T smart00560 122 EVRVYNRAL 130 (133)
T ss_pred EEEEecccc
Confidence 999988753
No 23
>PF10287 DUF2401: Putative TOS1-like glycosyl hydrolase (DUF2401); InterPro: IPR018805 This entry represents a family of proteins conserved primarily in fungi. One member is annotated putatively as OPEL, a house-keeping protein, but this could not be confirmed. It contains 5 highly conserved cysteines two of which form a characteristic CGC sequence motif.
Probab=85.34 E-value=3.5 Score=37.11 Aligned_cols=76 Identities=18% Similarity=0.322 Sum_probs=46.5
Q ss_pred EEEEEEecCCC-----CCceEEEEEEeeCC----------------CCCCeee-eccCCCCCCCceeEEeeeec-CCC--
Q 045763 46 IDMRIKLVPGY-----SAGTVTAYYLSSKG----------------ANWDEID-FEFLGNVTGEPYTLHTNVFS-QGN-- 100 (267)
Q Consensus 46 ~eariKlp~g~-----s~G~~~Afwl~~~~----------------~~~~EID-~E~lG~~~g~p~~~~tn~~~-~g~-- 100 (267)
|-.+++||... ...=.||+||++.- ..++|+| ||.|... +. .+.+.+|. +|.
T Consensus 103 Flfef~MP~~~~~~~~~~~DmPAIWlLNA~IpRT~QY~~~~CSCW~sGCGEfDifEVl~~g--~~-k~~St~H~~qG~~~ 179 (235)
T PF10287_consen 103 FLFEFSMPHETDGGSGFNYDMPAIWLLNAQIPRTSQYGNAGCSCWKSGCGEFDIFEVLNSG--DD-KLKSTFHDYQGTDD 179 (235)
T ss_pred EEEEEECCCCcCCCCCCCCCcChhHhccccCcchhhcCCCCCCccCCCcccceeeeeccCC--Cc-eeEEEEecccCccc
Confidence 67788888731 13457999999751 3689999 9999653 33 34444554 332
Q ss_pred ----CCcceEEEcCCCCCCCcEEEEEEEeCC
Q 045763 101 ----GDRERQFHLWFDPTTDFHTYSILWNPK 127 (267)
Q Consensus 101 ----g~~~~~~~l~fd~~~dfHtY~i~W~p~ 127 (267)
++...-+. -|+...-+++|.++.+
T Consensus 180 ~~~g~G~~~yf~---RPt~~~~k~aVifd~~ 207 (235)
T PF10287_consen 180 INGGGGSSDYFK---RPTSGTMKVAVIFDSS 207 (235)
T ss_pred cCCCCCCCCccc---CCCCCCeEEEEEEcCC
Confidence 11111111 3667788888888654
No 24
>cd00110 LamG Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.
Probab=83.69 E-value=20 Score=28.32 Aligned_cols=86 Identities=17% Similarity=0.137 Sum_probs=47.4
Q ss_pred eEeEEEEEEEEecCCCCCceEEEEEEeeCCCCCCeeeeccCCCCCCCceeEEeeeecCCCCCcceEEEcCC-CCCCCcEE
Q 045763 41 YLFGKIDMRIKLVPGYSAGTVTAYYLSSKGANWDEIDFEFLGNVTGEPYTLHTNVFSQGNGDRERQFHLWF-DPTTDFHT 119 (267)
Q Consensus 41 ~~YG~~eariKlp~g~s~G~~~Afwl~~~~~~~~EID~E~lG~~~g~p~~~~tn~~~~g~g~~~~~~~l~f-d~~~dfHt 119 (267)
-....+++++|.... .|++ |++-+. ...+-|-+|... | .++..+.. | .....+.... -....||.
T Consensus 19 ~~~~~i~~~frt~~~--~g~l--~~~~~~-~~~~~~~l~l~~---g---~l~~~~~~-g--~~~~~~~~~~~v~dg~Wh~ 84 (151)
T cd00110 19 RTRLSISFSFRTTSP--NGLL--LYAGSQ-NGGDFLALELED---G---RLVLRYDL-G--SGSLVLSSKTPLNDGQWHS 84 (151)
T ss_pred cceeEEEEEEEeCCC--CeEE--EEecCC-CCCCEEEEEEEC---C---EEEEEEcC-C--cccEEEEccCccCCCCEEE
Confidence 345567777776644 5655 333222 124445555542 2 23332222 2 1222333221 22467999
Q ss_pred EEEEEeCCceEEEECCeeEEE
Q 045763 120 YSILWNPKRVIFYADDVPIRE 140 (267)
Q Consensus 120 Y~i~W~p~~I~fyVDG~~vr~ 140 (267)
..|.+....+.++|||.++.+
T Consensus 85 v~i~~~~~~~~l~VD~~~~~~ 105 (151)
T cd00110 85 VSVERNGRSVTLSVDGERVVE 105 (151)
T ss_pred EEEEECCCEEEEEECCccEEe
Confidence 999999999999999985433
No 25
>KOG1834 consensus Calsyntenin [Extracellular structures]
Probab=80.46 E-value=9.4 Score=39.31 Aligned_cols=52 Identities=19% Similarity=0.328 Sum_probs=38.9
Q ss_pred CCCcEEEEEEEeCCceEEEECCeeEEEEeccccCCCCCCCCCCcEEEEeeeeCCCCC
Q 045763 114 TTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWNADSWA 170 (267)
Q Consensus 114 ~~dfHtY~i~W~p~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm~l~lnlw~gg~Wa 170 (267)
..+||.|.+.-.=-.++.||||+...-..-. ..||- .|.++-..|=+|.=|.
T Consensus 441 D~EWH~Y~ln~efp~VtlyvDG~Sfep~~i~----ddwpl-Hpsk~~tqLvVGACW~ 492 (952)
T KOG1834|consen 441 DNEWHHYVLNVEFPDVTLYVDGKSFEPPLIT----DDWPL-HPSKIETQLVVGACWQ 492 (952)
T ss_pred hhhhheeEEeecCceEEEEEcCcccCCceec----cCCcc-CcccccceeEEeeecc
Confidence 4789999999975559999999865332221 45887 7777777777888887
No 26
>PF14099 Polysacc_lyase: Polysaccharide lyase; PDB: 3ILR_A 3IKW_A 3INA_A 3IMN_A 3IN9_A 2ZZJ_A.
Probab=72.34 E-value=32 Score=29.73 Aligned_cols=55 Identities=11% Similarity=0.244 Sum_probs=34.9
Q ss_pred EEcCCCCCCCcEEEEE--EEeC---CceEEEECCeeEEEEeccccCCCCCCCCCCcEEEEeeee
Q 045763 107 FHLWFDPTTDFHTYSI--LWNP---KRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWN 165 (267)
Q Consensus 107 ~~l~fd~~~dfHtY~i--~W~p---~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm~l~lnlw~ 165 (267)
+.+...+...||++.| .|.+ ..|..++||+++..+.... .++.....++-+.|--
T Consensus 144 ~~~~~~~~G~W~~~~i~~~~s~~~~G~~~vw~nG~~v~~~~g~~----~~~~~~~~y~K~GiYr 203 (224)
T PF14099_consen 144 VDLGPVERGKWHDFVIHVKWSPDSDGFLEVWLNGKLVVDYKGPT----GYNDDRGPYFKFGIYR 203 (224)
T ss_dssp EECCCS-TTSEEEEEEEEEE-CCCTEEEEEEECCEECCEEEEEE----CECCSSEEEEEEEEEE
T ss_pred ecCCCcCCCcEEEEEEEEEECCCCCEEEEEEECCEEEEEEeCCc----eeCCCCcceeEEEEEC
Confidence 3344344588999987 4765 5799999999998887632 2322355666666653
No 27
>PF09224 DUF1961: Domain of unknown function (DUF1961); InterPro: IPR015305 Members of this family are found in a set of hypothetical bacterial proteins. Their exact function has not, as yet, been determined. ; PDB: 1OQ1_C.
Probab=68.64 E-value=23 Score=31.47 Aligned_cols=59 Identities=24% Similarity=0.379 Sum_probs=37.7
Q ss_pred CCcEEEEEEEeCCceEEEECCeeEEEEeccccCCCCCCCCCCcEEEEeeeeCCCCCCCCCccccCCCC-CCEEEEEeEEE
Q 045763 115 TDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWNADSWATQGGRIKIDWKY-APFTASYSNFT 193 (267)
Q Consensus 115 ~dfHtY~i~W~p~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm~l~lnlw~gg~Wat~GG~~~~d~~~-aPf~a~~~~~~ 193 (267)
..|+.-.|.=....|.|.|||.+|..++.... ...|- -.+|++ -..+ +|.+|.|++++
T Consensus 159 ~~~Yr~~i~K~~~~v~f~In~L~vf~w~Dd~~--~~gPv-----------------l~~G~I--GfRqMapl~A~Yrnl~ 217 (218)
T PF09224_consen 159 RGPYRMEIVKDGRTVRFSINGLPVFSWTDDGS--TYGPV-----------------LRGGRI--GFRQMAPLVARYRNLE 217 (218)
T ss_dssp -S-EEEEEEEETTEEEEEETTEEEEEEE--SS--SSSS--------------------SBEE--EEEEETT-EEEEEEEE
T ss_pred CCCEEEEEEEcCCEEEEEECCEEEEEEEcCCC--ccCCc-----------------ccCcEe--eeeccchhhhhhcccc
Confidence 35666677889999999999999999875432 11232 014653 2333 79999999998
Q ss_pred E
Q 045763 194 A 194 (267)
Q Consensus 194 v 194 (267)
|
T Consensus 218 V 218 (218)
T PF09224_consen 218 V 218 (218)
T ss_dssp E
T ss_pred C
Confidence 6
No 28
>PF02210 Laminin_G_2: Laminin G domain; InterPro: IPR012680 Laminins are large heterotrimeric glycoproteins involved in basement membrane function []. The laminin globular (G) domain can be found in one to several copies in various laminin family members, including a large number of extracellular proteins. The C terminus of the laminin alpha chain contains a tandem repeat of five laminin G domains, which are critical for heparin-binding and cell attachment activity []. Laminin alpha4 is distributed in a variety of tissues including peripheral nerves, dorsal root ganglion, skeletal muscle and capillaries; in the neuromuscular junction, it is required for synaptic specialisation []. The structure of the laminin-G domain has been predicted to resemble that of pentraxin []. Laminin G domains can vary in their function, and a variety of binding functions have been ascribed to different LamG modules. For example, the laminin alpha1 and alpha2 chains each have five C-teminal laminin G domains, where only domains LG4 and LG5 contain binding sites for heparin, sulphatides and the cell surface receptor dystroglycan []. Laminin G-containing proteins appear to have a wide variety of roles in cell adhesion, signalling, migration, assembly and differentiation. This entry represents one subtype of laminin G domains, which is sometimes found in association with thrombospondin-type laminin G domains (IPR012679 from INTERPRO).; PDB: 3POY_A 3QCW_B 3R05_B 3ASI_A 3MW4_B 3MW3_A 1QU0_D 1DYK_A 1OKQ_A 3SH4_A ....
Probab=67.17 E-value=52 Score=24.82 Aligned_cols=74 Identities=14% Similarity=0.122 Sum_probs=47.2
Q ss_pred CCCcEEEEEEEeCCceEEEECCeeEEEEeccccCCCCCCCCCCcEEEEeeeeCCCCCCCCCccccCCCCCCEEEEEeEEE
Q 045763 114 TTDFHTYSILWNPKRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWNADSWATQGGRIKIDWKYAPFTASYSNFT 193 (267)
Q Consensus 114 ~~dfHtY~i~W~p~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm~l~lnlw~gg~Wat~GG~~~~d~~~aPf~a~~~~~~ 193 (267)
...||+-.|.=....++..||+............ . .-+...-.++.||............ ...|.-.+++++
T Consensus 53 dg~wh~v~i~~~~~~~~l~Vd~~~~~~~~~~~~~----~--~~~~~~~~l~iGg~~~~~~~~~~~~--~~~f~Gci~~l~ 124 (128)
T PF02210_consen 53 DGQWHKVSISRDGNRVTLTVDGQSVSSESLPSSS----S--DSLDPDGSLYIGGLPESNQPSGSVD--TPGFVGCIRDLR 124 (128)
T ss_dssp SSSEEEEEEEEETTEEEEEETTSEEEEEESSSTT----H--HCBESEEEEEESSTTTTCTCTTSST--TSB-EEEEEEEE
T ss_pred ccceeEEEEEEeeeeEEEEecCccceEEeccccc----e--ecccCCCCEEEecccCccccccccC--CCCcEEEcCeEE
Confidence 5779999999999999999999988776543210 0 0233444577787654222111111 567888888887
Q ss_pred Ee
Q 045763 194 AD 195 (267)
Q Consensus 194 v~ 195 (267)
|.
T Consensus 125 vn 126 (128)
T PF02210_consen 125 VN 126 (128)
T ss_dssp ET
T ss_pred EC
Confidence 74
No 29
>PF02973 Sialidase: Sialidase, N-terminal domain; InterPro: IPR004124 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Sialidases (GH33 from CAZY) hydrolyse alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates. Sialidases may act as pathogenic factors in microbial infections []. The 1.8 A structure of trans-sialidase from leech (Macrobdella decora, Q27701 from SWISSPROT) in complex with 2-deoxy-2, 3-didehydro-NeuAc was solved. The refined model comprising residues 81-769 has a catalytic beta-propeller domain, a N-terminal lectin-like domain and an irregular beta-stranded domain inserted into the catalytic domain [].; GO: 0004308 exo-alpha-sialidase activity, 0005975 carbohydrate metabolic process; PDB: 2JKB_A 2VW2_A 2VW0_A 2VW1_A 2V73_B 2V72_A 1SLI_A 1SLL_A 2SLI_A 4SLI_A ....
Probab=64.42 E-value=98 Score=27.01 Aligned_cols=135 Identities=15% Similarity=0.188 Sum_probs=68.9
Q ss_pred ceeEeEEEEEEEEecCCCCCceEEEEEEeeCC----------CCCCeeeeccCCCCCCCceeEEeeeecCCCCCcceEEE
Q 045763 39 KEYLFGKIDMRIKLVPGYSAGTVTAYYLSSKG----------ANWDEIDFEFLGNVTGEPYTLHTNVFSQGNGDRERQFH 108 (267)
Q Consensus 39 ~~~~YG~~eariKlp~g~s~G~~~Afwl~~~~----------~~~~EID~E~lG~~~g~p~~~~tn~~~~g~g~~~~~~~ 108 (267)
..+.-|.|-+|.|.-.. . -+-|++-.+++ -..++|=||+.+.....-|...+.+-..+. .
T Consensus 30 k~L~~gTI~i~Fk~~~~--~-~~~sLfsiSn~~~~n~YF~lyv~~~~~G~E~R~~~~~~~y~~~~~~~v~~~-------~ 99 (190)
T PF02973_consen 30 KKLEEGTIVIRFKSDSN--S-GIQSLFSISNSTKGNEYFSLYVSNNKLGFELRDTKGNQNYNFSRPAKVRGG-------Y 99 (190)
T ss_dssp CT-SSEEEEEEEEESS---S-SEEEEEEEE-TSTTSEEEEEEEETTEEEEEEEETTTTCEEEEEESSE--SE-------E
T ss_pred hcccccEEEEEEecCCC--c-ceeEEEEecCCCCccceEEEEEECCEEEEEEecCCCCcccccccccEeccc-------c
Confidence 34556777778776333 3 34455555542 012377788887654443444433111100 0
Q ss_pred cCCCCCCCcEEEEEEEe--CCceEEEECCeeEEEEeccccCCCCCCCCCCcEEEEeeeeCCCCCCCCCccccCCCCCCEE
Q 045763 109 LWFDPTTDFHTYSILWN--PKRVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSLWNADSWATQGGRIKIDWKYAPFT 186 (267)
Q Consensus 109 l~fd~~~dfHtY~i~W~--p~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm~l~lnlw~gg~Wat~GG~~~~d~~~aPf~ 186 (267)
+ ....||+-++.=+ .....+||||..+.++.... ..|-.+-|--=. +-.|+- .++| -...||.
T Consensus 100 -~--~~~~~~tva~~ad~~~~~ykly~NG~~v~~~~~~~---~~Fis~i~~~n~--~~iG~t--~R~g-----~~~y~f~ 164 (190)
T PF02973_consen 100 -K--NNVTFNTVAFVADSKNKGYKLYVNGELVSTLSSKS---GNFISDIPGLNS--VQIGGT--NRAG-----SNAYPFN 164 (190)
T ss_dssp -T--TEES-EEEEEEEETTTTEEEEEETTCEEEEEEECT---SS-GGGSTT--E--EEESSE--EETT-----EEES--E
T ss_pred -c--CCceEEEEEEEEecCCCeEEEEeCCeeEEEecccc---ccHhhcCcCCce--EEEcce--EeCC-----Cceeccc
Confidence 1 1356888888886 66899999998888775432 223222110001 111221 1223 2356999
Q ss_pred EEEeEEEEeeee
Q 045763 187 ASYSNFTADACI 198 (267)
Q Consensus 187 a~~~~~~v~~c~ 198 (267)
-.+++++|..++
T Consensus 165 G~I~~l~iYn~a 176 (190)
T PF02973_consen 165 GTIDNLKIYNRA 176 (190)
T ss_dssp EEEEEEEEESS-
T ss_pred ceEEEEEEEcCc
Confidence 999999998775
No 30
>cd00152 PTX Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated in innate immunity. CRP binds to ligands containing phosphocholine, SAP binds to amyloid fibrils, DNA, chromatin, fibronectin, C4-binding proteins and glycosaminoglycans. "Long" pentraxins have N-terminal extensions to the common pentraxin domain; one group, the neuronal pentraxins, may be involved in synapse formation and remodeling, and they may also be able to form heteromultimers.
Probab=64.40 E-value=92 Score=26.70 Aligned_cols=28 Identities=7% Similarity=0.240 Sum_probs=23.5
Q ss_pred CCCCcEEEEEEEe--CCceEEEECCeeEEE
Q 045763 113 PTTDFHTYSILWN--PKRVIFYADDVPIRE 140 (267)
Q Consensus 113 ~~~dfHtY~i~W~--p~~I~fyVDG~~vr~ 140 (267)
....||...+.|+ ..++.+||||+++..
T Consensus 88 ~~g~W~hv~~t~d~~~g~~~lyvnG~~~~~ 117 (201)
T cd00152 88 SDGAWHHICVTWESTSGIAELWVNGKLSVR 117 (201)
T ss_pred CCCCEEEEEEEEECCCCcEEEEECCEEecc
Confidence 4678999999998 457999999998743
No 31
>smart00282 LamG Laminin G domain.
Probab=57.36 E-value=44 Score=26.10 Aligned_cols=27 Identities=19% Similarity=0.225 Sum_probs=23.1
Q ss_pred CCCcEEEEEEEeCCceEEEECCeeEEE
Q 045763 114 TTDFHTYSILWNPKRVIFYADDVPIRE 140 (267)
Q Consensus 114 ~~dfHtY~i~W~p~~I~fyVDG~~vr~ 140 (267)
...||.-.|.-....+.++|||.....
T Consensus 61 dg~WH~v~i~~~~~~~~l~VD~~~~~~ 87 (135)
T smart00282 61 DGQWHRVAVERNGRRVTLSVDGENPVS 87 (135)
T ss_pred CCCEEEEEEEEeCCEEEEEECCCcccc
Confidence 467999999999999999999975433
No 32
>smart00159 PTX Pentraxin / C-reactive protein / pentaxin family. This family form a doscoid pentameric structure. Human serum amyloid P demonstrates calcium-mediated ligand-binding.
Probab=53.93 E-value=1.5e+02 Score=25.65 Aligned_cols=26 Identities=15% Similarity=0.365 Sum_probs=22.2
Q ss_pred CCCCcEEEEEEEe--CCceEEEECCeeE
Q 045763 113 PTTDFHTYSILWN--PKRVIFYADDVPI 138 (267)
Q Consensus 113 ~~~dfHtY~i~W~--p~~I~fyVDG~~v 138 (267)
....||...+.|+ ..++.+||||+++
T Consensus 88 ~~g~W~hvc~tw~~~~g~~~lyvnG~~~ 115 (206)
T smart00159 88 SDGKWHHICTTWESSSGIAELWVDGKPG 115 (206)
T ss_pred cCCceEEEEEEEECCCCcEEEEECCEEc
Confidence 3578999999997 4579999999986
No 33
>cd00070 GLECT Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation.
Probab=33.98 E-value=88 Score=24.72 Aligned_cols=48 Identities=21% Similarity=0.297 Sum_probs=33.2
Q ss_pred eeecCCCCCcceEEE-cCCCCCCCcEEEEEEEeCCceEEEECCeeEEEEe
Q 045763 94 NVFSQGNGDRERQFH-LWFDPTTDFHTYSILWNPKRVIFYADDVPIREFK 142 (267)
Q Consensus 94 n~~~~g~g~~~~~~~-l~fd~~~dfHtY~i~W~p~~I~fyVDG~~vr~~~ 142 (267)
|.+.+|.-+.|++.. .+|-+. ...+-.|.=.++++..+|||+++..+.
T Consensus 56 Ns~~~g~Wg~Eer~~~~pf~~g-~~F~l~i~~~~~~f~i~vng~~~~~F~ 104 (127)
T cd00070 56 NSFLNGNWGPEERSGGFPFQPG-QPFELTILVEEDKFQIFVNGQHFFSFP 104 (127)
T ss_pred cCCCCCEecHhhccCCCCCCCC-CeEEEEEEEcCCEEEEEECCEeEEEec
Confidence 344445545565553 445443 344888889999999999999987775
No 34
>cd06482 ACD_HspB10 Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role.
Probab=28.65 E-value=1.2e+02 Score=22.93 Aligned_cols=50 Identities=18% Similarity=0.259 Sum_probs=28.1
Q ss_pred eEEecCCCEEEEEEcCCCCCeEEEcceeEeEEEEEEEEecCCCCCceEEE
Q 045763 14 AKIHDNGKVLTLNLDKSGGSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTA 63 (267)
Q Consensus 14 ~~~~~~G~~l~L~ld~~sGsg~~Sk~~~~YG~~eariKlp~g~s~G~~~A 63 (267)
+.+.=.++.|+|+..+..-..-.....+.||.|+=++.||.+-...-+.|
T Consensus 24 I~V~v~~~~L~I~ger~~~~e~~~~~er~~g~F~R~f~LP~~Vd~d~i~A 73 (87)
T cd06482 24 VKVKVKDGKVQVSAERENRYDCLGSKKYSYMNICKEFSLPPGVDEKDVTY 73 (87)
T ss_pred eEEEEECCEEEEEEEEecccccCCccEEEEEEEEEEEECCCCcChHHcEE
Confidence 44433345688877543211101123679999999999997532333333
No 35
>PF06832 BiPBP_C: Penicillin-Binding Protein C-terminus Family; InterPro: IPR009647 This conserved region of approximately 90 residues is found in a sub-group of bacterial Penicillin-Binding Proteins (PBPs). A variable length loop region separates this region from the transpeptidase unit (IPR001460 from INTERPRO). It is predicted to be a beta fold.
Probab=26.69 E-value=73 Score=23.51 Aligned_cols=34 Identities=12% Similarity=0.207 Sum_probs=20.3
Q ss_pred ceEEEECCeeEEEEeccccCCCCCCCCCCcEEEEee
Q 045763 128 RVIFYADDVPIREFKNLEYLGIPFPKKQPMRIYSSL 163 (267)
Q Consensus 128 ~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm~l~lnl 163 (267)
.+.|||||+++.+-..... ..|+...|-.-.|.+
T Consensus 44 ~~~W~vdg~~~g~~~~~~~--~~~~~~~~G~h~l~v 77 (89)
T PF06832_consen 44 PVYWFVDGEPLGTTQPGHQ--LFWQPDRPGEHTLTV 77 (89)
T ss_pred cEEEEECCEEcccCCCCCe--EEeCCCCCeeEEEEE
Confidence 7889999999955443221 233333555555555
No 36
>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.
Probab=26.60 E-value=1.8e+02 Score=21.09 Aligned_cols=47 Identities=17% Similarity=0.246 Sum_probs=28.3
Q ss_pred eEEecCCCEEEEEEcCCCCCeEEEcceeEeEEEEEEEEecCCCCCceEEE
Q 045763 14 AKIHDNGKVLTLNLDKSGGSGFQSKKEYLFGKIDMRIKLVPGYSAGTVTA 63 (267)
Q Consensus 14 ~~~~~~G~~l~L~ld~~sGsg~~Sk~~~~YG~~eariKlp~g~s~G~~~A 63 (267)
+.+.-+++.|.|+..+..... ...+.+|+|+=+++||..-....+.|
T Consensus 23 I~v~v~~~~L~I~g~~~~~~~---~~~~~~~~f~r~~~LP~~vd~~~i~A 69 (83)
T cd06526 23 LKVKVSDNKLVVEGKHEERED---EHGYVSREFTRRYQLPEGVDPDSVTS 69 (83)
T ss_pred cEEEEECCEEEEEEEEeeecc---CCCEEEEEEEEEEECCCCCChHHeEE
Confidence 444444567888775432211 34567899999999997533333444
Done!